>input_sequence_81760
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-------------------------------------------------------------ATGACTGAACTAAAAATAC
AGAGGTATGCCGGAACAAAGAAGACTGTTTTCCAGGTTTCCGAGTTCGTTAGATCCATGTTAGAAGCCTTTGCAGCCTCC
AGAATGTTTCCCGTGAGGCCGACGCCAACTATCCCAGCCAATGTCCCAGCTGTATTGGAAACCCCCATCACTATGCCGGC
GAACTTTGGAGCAACATCCATGTGGTTCACGGCGAACCCTGCTCTTCCTAGAGCCAGAAAGCCAAGGGACACCGATGAGC
AGATCACAGTCCCTGAGGGCGTCCCGAATGAAGGGAGGGCCATGAGTGCAAGTGCCGAGACAACAAACCCGATGGTGTTA
AGGAGCTTCCTTGTCTTGGTAACTGATAAGATCCTTTTTGTAATCAAGTGA-----------------------------
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-------------------------
>chr3B_1_TraesCS3B01G519200
TCTCATCTGCTTTTGTGAGATGAGCCACCGCAGCCACCGTTGAGTTGAAGCACACATATGTTTCAACTTTATTTTTCTTG
TAAATGTGTCTTCATATACATTTTTCAGAAAAGAGGGGAACACTCTCGGCCTATGCCGCGTGCCTTTATATAAGGATGCA
ATGCCTTCTCCTGCTCAATACTTGCATTAGTAATGGGAGGCA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TCTGTAGTTCATTAGGAATGGGAGGCATCTTGAAACGCA-TGGACTAACCGAAGCATGAAGGCGGCGC
TCGCAGCAGTACTTTTGGGGGTGGAAATATTGTAAGTGGTAATGCCATCAGCAACTA--GGTTAGTGCCTCAGTGAACGG
AAGTACTATAAGAGAGCAAGTCGTGTCTGAACTCTGTGCTACAGAAAGAAATTCAGAAAAGGAAGACTGCATACGCTACA
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------AAAAAAAAATCC
CACTA-TTTATCAATTTGATTCAAAGCATTGAAATTTCTCTTTTAC----------------------------------
----------------------------------ATTCATATGCATGAAGAACAAGGCAAAGGCCTTAATAAGTACT---
------------------------------AGCACATAATAGTATCCTCATCTTACCTTTGCATATGGTTTAATCTTACT
TTGACCATAATATTTCAGGCTTCCTGT--ACTTCTCCTAT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TCTTGACTTCT
TGCTGCACAATTCACATGATTTCCTACCC--AGGAAAATTACTTGTAAAACAGAGATGATGTATGCCCAGCAAATTACAC
AACGTAATACTGGTTGTAAATAGGCCAACCAGCCAGTTGGAATAACAGAGTCATAGGATCATTCCAGATAACACAATTTA
CTA--GACAAGTGTTATTCCTCCTAACATAACATAACTCTTAATATGTGTGGGATGCAGTCTGAGCTCTGAAATCTGACA
GATATAATGAATAAAA-TACATGTGAGATTCCCGTGTTTCTATCCTGCCTCGCCGCCC----GTAAATGACAAGAAAAGA
ACAGGCAAAAATAATCATCATCTATTCGAAAATCTTCTCACCAGTTGAGAAGACCAAGAAAATGACTGAACTAAAAATAC
AGAGGTATGCCGGAACAAAGAAGACTGTTTTCCAGGTTTCCGAGTTCGTTAGATCCATGTTAGAAGCCTTTGCAGCCTCC
AGAATGTTTCCCGTGAGGCCGACGCCAACTATCCCAGCCAATGTCCCAGCTGTATTGGAAACCCCCATCACTATGCCGGC
GAACTTTGGAGCAACATCCATGTGGTTCACGGCGAACCCTGCTCTTCCTAGAGCCAGAAAGCCAAGGGACACCGATGAGC
AGATCACAGTCCCTGAGGGCGTCCCGAATGAAGGGAGGGCCATGAGTGCAAGTGCCGAGACAACAAACCCGATGGTGTTA
AGGAGCTTCCTTGTCTTGGTAACTGATAAGATCCTTTTTGTAATCAAGTGATCAGCAACCACTCCACCAATGTTGGAGAA
TATAAACATGTTGAAATAGGGAAGCATCTTTGACGATCCCATGTCCTGGAGGCTAAGCTTAAGGGCTAGTTCGAAATAGG
TAGGCAGCCAGTTCATGATAACATACAAGGCATAGTGGAAGGTGAAGTTGTTCACGACAATTGCCCAAACAGGTAGACTG
AAGATAATCCTTCGCCATGGTATCTTTACAGTACGAGGTGCAACAACTCCTACTGACTGCGCCTTGATCTTCTCCCGAGA
TGCTACTTTTGGCATTGCCACTTTTGGAAGGTCGGTGCGAGGTGGCTCACTGGAGAACTTCAACCATATTACAGACCATG
CTACTCCAAGTACTGCTTCGACTAAACATACAGATTGGGGTCCCATGTGCTTCACCAGACTTGGAAAAAACAACATGCCA
CAAGCTGCCCCGAGGTACATCCCTGAGGTTGTTAACGACACTGAGCGAGAGCGCTCCTGCGGTGGCACCCATTGTGCGAG
GACTGTG--TG--AATGGCAGGAAATATGAAACCTTGTGCTACACCAACAAAAAGG-CGAGAAAGGACCAGAATGACTGC
TCTGTTGGGGTCCAGTGGAATTAGACCGCATATCAAGGACCACAACAGGAATGACAGCAGCAGAACACGTCTCCCTCCCA
ATCTCTGAGCTGCCCATCCACCAGGAATTTGTGACAAAACATAACCATAATAGA--ACATGGAGAGTATCAGGCCCTTGT
TTGCTTGATTCACGTTGATTGCATCAGCTGCTACGGTGTACGCAATTGAGAAACCCACACGCTCAACGTAACAAACATTT
GTGCAGATGAATGTCAGCAATACTATGACATAACGCTTTGGGATCTTCATTCTCGCCATCACTAATTA----GAGA-TGA
ACCACAAAGTGTTGTAGCAGTCTTAATCAGGGCGCCACTTGCTGACCTCCCACGAATATTT--ACCAGGGTTTACCAGAA
ACCTGTCTTTCTTCCTTCCATCTCT
>chr3A_1
TCTCATCTGCTTTTGTGAGATGTGTCATCGCAGCCATCGTTGAGTTGAAGCACACATATGTTTCAACTTTATTTT-CTTG
TACATGTGTCTTCATATACTTTTTTCAGAAAAGAGGTGAACACTCTCGGCCTGTGGCACGTGCCTTTATATAAGGATGCA
TTTCCTTCTCCTGCTCAATACTTGCATACCCATTTTTTGACCGTAGTCTTCCTCCCACCTCATATATTAGCTCTTCTTAT
GAAGCAAGTAGCTCCTAGTTAACAAGAATTGAGTTGAGAGCCTCGAGAGAGGATGAGAGGAATGGCAAATACTCCCTCCG
TAAACTAATATAAGAGCGTTTAGATTACTATTTTAGTGATCTAAACACTCTTATATTAGTTTACAGAGGGAGTAGAAGTT
AGTGGAAGCGCGGCTGTAGTTCATTAGGAATGGGAGGCACCTTGGAACACA-TTGACTAACCAGAAGTTGAAGATGGTGC
TTGCAGCAGTACTTTTGGGACTAGAAATATTCTATCTGGTAGTGCGATCAGCAACTATAGGTTAGTCCCTGAACCATGAA
AAG---TGTAAGAGAGCAAGTCGTGTCTGAACTATACGCTACAGAAAGAGATTCAGAAAAGGAAGACTGCATACGCTACA
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------AAGATTTTC-CC
CACTA-TTTATCCATTTGATTCAAAACATTGAAATTTCTCTTTTACATTCATATGCATGAAGAGAAGGGAGCCTTGGCAC
AGTGGTAAAAGCTGCTGCCTTGTGACCATGAGGTATTCATATGCATGAAGAACAAGGCAAAGGCCTTAATAAGTACTCCC
TCTGTAAAGAAATATAAGAGCGTTTGTAATAGCATATAATAATATCTTCATCTTACCTTTGCATATGATTCAATCTTAAT
TTGACCATAATATTGTAGGCTTCCTATAAACTTCTCCTAT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TCTCGACTTCT
TGCTGCACAATTCACATTATTTCCTACCC--AGGAAAATGACTTACAAAACAGAGATCATGTATGCCCAGCAAATTACAC
AACGTAATACTGCTTGTAAATAGGCCAACCAGCCAGCTGGAATAACAGAGTTATAGGATGATTCCAGATAACACAATTTA
CTACAGACAAGTGTTATTCCTCCTAACATAACATAACTCTCAATATGTGTGGGATGCAGTCCGAGCTCTGAAATCTGACA
GATATAATGAATAAAA-TACATGTGATATTCCCGTGTTCCTATCCTGTCTCACTGCCC----GTAAATGACAAGAAAAGA
ACAGGCAAAAATAATCATCCTCTATTCGAAAATCTTCTCACCAGTTGAGAAGACCAAGAAAATGACTGAACTAAAAATAC
AGAGGTATGCTGGAACAAAGAAGACTGTTTTCCAGGTTTCCGAGTTCGTTAGATCCATGTTAGAAGCCTTTGCAGCCTCC
AGAATATTTCCCGTGAGGCCAACGCCAACTATCCCAGCCAATGTCCCAGCTGTATTGGAAACTCCCATCACTATGCCGGC
AAACTTTGGAGCAACATCCATGTGGTTCACGGCAAACCCTGCTCTTCCTAGAGCCAGAAAACCAAGGGATACCGATGAAC
ATATCACAGTCCCTGAGGGCGTCCCGAATGAAGGGAGGGCCATGAGTGCAACAGCCGAGACAACAAACCCAATGGTGTTT
AGGAGCTTCCTTGTCTTGGTAACTGATAAGATCCGTTTTGTAATCAAGTGATCAGCAACCACTCCACCAATGTTGGAGAA
TATAAACATGTTGAAATAGGGAAGCATCTTTGACGATCCCATGTCCTGGAGGCTAAGCTTAAGGGCTAGTTCGAAATAGG
TAGGCAGCCAGTTCATGATAACATACAAGGCATAGTGGAAGGTGAAGTTGTTCACGACAATTGCCCAAACAGGTAGACTG
AAGATAATCCTTCGCCATGGTATCTTTACAGTGCGAGGTGCAACAACCCCTACTGATTGCGCCTTAATCTTCTCCCGAGA
TGCTACTTTTGGCATTGCCACTTTTGGAAGGTCAGTGCGAGGTGGCTCACTGGAGAACTTCAACCATATTACAGACCATG
CTACTCCAAGTACTGCTTCGACTAAACATACAGATTGGGGTCCCATGTGCTTCACCAGACTTGGAAAAAACAACATGCCA
CAAGCTGCCCCGAGGTACATCCCTGAGGTTGTTAATGACACTGAGCGAGAGCGCTCCTGCGGTGGCACCCATTGTGCCAG
GACTGTG--TG--AATGGCAGGAAATATGAAACCTTGTGCTACACCAACAAAAAGG-CGAGAAAGGACCAGAATGACTGC
TCTGTTGGGGTCCAGTGGAATTAGACCGCATATCAAGGACCACAACAGGAATGACAGCAGCAGAACACGTCTCCCTCCCA
ATCTCTGAGCTGCCCATCCACCAGGAATTTGTGACAAAACATAACCATAATAGA--ACATGGAGAGTATCAGGCCCTTGT
TTGCTTGATTCACGTTGATTGCATCAGCTGCTACGGTGTACGCAATCGAGAAACCCACACGCTCAACGTAACAAACATTT
GTGCAGATGAATGTCAGCAATACTATGACATAACGCTTTGGGATCTTCATTCTCGCCATCACTA----ATTGGAGA-TGA
ACCACAAAGTGTTGTAGCAGTCTTAATCAGCGCGCCACTTGTTGACCTCCCACGAATATTT--ACCAGGGTTTACCATAA
ATCTGTCATTCTTCCTTCCATCTCT
>chr3D_194
--------------------------------------------------------------------------------
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--TGGAAGTGCGTCTGTAGTTCATTAGGAATGGGAGGCATCTTGAAACGCTTTGGACTAACCGAAACTTGAAGGCAGCGC
TCGCAGCAGTACTTTTGGGGGTGGAAATATCTCAAGTGGTAATGCCATCAGCAACTA--GGTTAGTGCCAGAAGTTTGAA
AAG---TATAAGAGAGCAAGTCGTGTCTGAACTCTACGCTACTGGAAGAAATTCAGAATAGGAAGACTGCCAAATGTCTC
CGAGCGACATACTCCCATAGAAAATTAATTTCTGTTATCGAAAGATACAGAAAAATAGATATGAAAATTTTCATAGGAAA
AAAATTTGAGCTGCAACGGAAAAAAAAGTAGTGCTCATAATCGAATATTTAGATGAAAAACCTGGCAAAAAATATTTTTC
CCTATAAACATTTACAATCACAAAAATAGCCAAACACTTCACTTGTCACCCGTTTGATGGCTTGACAAAAGATTTTCAAT
GATAGTTCCCCATTCTCATATTCTATATAAAAGTCCACAAGCATATACTCTAACCTTGAACTGTGCGAGATGACTGGGGA
AAACAGGGCCATGAATCTATTGTCTCTGCTTTGCCGACGCGTGGACAAGATTTCTGTTTTTTATATTCCTTTTGTTTGTT
TGTTAATGTATCTTGTATTGTAAGCTGGTAGGATCACCATCCCGCCCTGCTGCTCTTGTTCAAAAATAATACTCCCTCCG
TAAACTAATATAAAAGCGTTTAGATTACTACTTTCCACGAGAGGACACAATGGACAGCGGTATATGTAATGACTACTGGT
TGCAAAGCGTAGTTTTCTCAAGACTTTACATTGATGGTGTCTGTGATTCATAAGAAAACCATATCAATAAGATTTTT-CC
TACTATTTTATCCATTTGATTCAAAGCATTGAAATTTCTCTTTCAC----------------------------------
----------------------------------ATTCATATGCATGAAGAACAAGGCAAAGGCCTTAAG----------
-----------------------------TAGCATATAATAATATCTTCATCTTACCTTTGCATATGGTTAAATCTTAAT
TTGACCATAATATTTTAGGCTTCCTGT--ACTTGTCCTATTCTTGTGAATTAAACACCCAATTATGCACATCAATGTGTT
TTTGAAACCTTATGAATCAAAGAGGCCCTCAACTTTACCCAATATAGTTGAACTAACATGTGAATGTAAAGGAATGGAGC
TTGCTAGGGATGTGTGGGCACAGGTTTTTCAGGTTCTACTGCTCACTTACAGTGAAATAAACATCTTCCAGCAGGTTTAT
CAAACATAAAAATGCGCCTCTACACAGCCAAAGGGAGCGTCCATGTTCCAGTCAGATTTACCTTTAAATAGAAATTTCAT
TTAGATCAAATGTAGACCAATCACATTTTCTTTTCAGATCCTGCCAGCAAACAAAATGTTGTCATGTCATCCTGACTTCT
TGCTGCACAATTCACATTGTTTCCTATCCCCAGGAAAATGACTTACAAAACAAAGATGATGTATGCCCAGC---TTACAC
AACGTA-------TTGTAAATAGGCCAACCAGCCAGCTGGAATAACAGAGTCATAGGATCATTCCAAATAACACAATTTA
CTACGGACAAGTGTTATTCCTCCTAACATAACATAAGTCTTAATATGTGTGGGATGCAGTCTGAGCTCTGAAATCTGACA
GGTATAATGAATAAAA-TACATGTGAGATTCCCGTGTTTCTATCCTGCCTCG----CCGCCCGTAAATGACAAGAAAAGA
ACAGGCAAAAATAATCATCCTCTATTCAAAAATCTTCTCACCAGTTGAGAAGACCAAGAAAATGACTGAACTAAAAATAC
AGAGGTATGCTGGAACAAAGAAGACTGTTTTCCAGGTTTCGGAGTTCGTTAGATCCATGTTAGAAGCCTTTGCAGCCTCC
AGAATATTTCCCGTGAGGCCAACGCCAACTATCCCAGCCAATGTCCCAGCTGTATTGGAAACCCCCATCACTATGCCGGC
GAACTTTGGAGCAACATCCATGTGATTCACGGCAAACCCTGCTCTTCCTAGAGCCAGAAAGCCAAGAGACACCGATGAAC
AGATCACAGTCCCTGAGGGCGTCCCGAATGAAGGGAGGGCCATGAGTGCAACAGCCGAGACAACAAACCCAATGGTGTTA
AGGAGCTTCCTTGTCTTGGTAACTGATAAGATCCTTTTTGTAATCAAGTGATCAGCAACCACTCCACCAATGTTGGAGAA
TATAAACATGTTGAAATAGGGAAGCATCTTTGACGATCCCATATCCTGGAGGCTAAGCTTAAGGGCTAGTTCGAAATAGG
TAGGCAGCCAGTTCATGATAACATACAAGGCATAGTGGAAGGTGAAGTTGTTCACGACAATTGCCCAAACAGGTAGACTG
AAGATAATCTTTCGCCATGGTATCTTTACAGTGCGAGGTGCAACAACCCCTACTGATTGCGCCTTAATCTTCTCCCGAGA
TGCTACTTTTGGCATTGCCACTTTTGGAAGGTCAGTGCGAGGTGGCTCACTGGAGAACTTCAACCATATTACAGACCATG
CTACTCCAAGTACTGCTTCGACTAAACATACAGATTGGGGTCCCATGTGCTTCACCAGACTTGGAAAAAACAACATGCCA
CAAGCTGCCCCGAGGTACATCCCTGAGGTTGTTAATGACACTGAGCGAGAGCGCTCCTGCGGTGGCACCCATTGTGCCAG
GACTGTG--TG--AATGGCAGGAAATATGAAACCTTGTGCTACACCGACAAAAAGG-CGAGAAAGGACCAGAATGACTGC
TCTGTTGGGGTCCAGTGGAATTAGACCGCATATCAAAGACCACAACAGGAATGACAGTAGCAGAACACGTCTGCCTCCCA
ATCTCTGAGCTGCCCATCCACCAGGAATTTGCGACAAAACATAACCATAATAGA--ACATGGAGAGTATCAGGCCCTTGT
TTGCTTGATTCACGTTGATTGCATCAGCTGCTACGGTGTACGCAATCGAGAAACCCACACGCTCAACGTAACAAACATTT
GTGCAGATGAATGTCAGCAATACTATGACATAACGCTTTGGGATCTTCATTCTCGCCATCACTAATTA----GAGA-TGA
ACCACAAAGTGTTGTAGCAGTCTTAATCAGGGCGCCACTTGTTGACCTCCCACGAATATTT--ACCAGGGTTTACCATAA
ATCTGTCATTCTTCCTTGCATCTCT
>chr1D_618
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---------------------------------------------------------------------TCCTGACTTCT
AGCTACGCAATTCTCATTATTTCCTATCCCCAGGAAAATATCTTAAAAAACAGAGATGATGTATGCCCGATAAATTACAC
AATGGAATA---GTTGTAAATAGGCCAATCAACAAGCCGGAATAACATAGTCGTATGATCATTCCAGAAAACACAATTTA
CTACAGAGAAGTATTATTCTTCCTAACATAACATAA--CTTAATATGTGTGGGATGCAGTCTGAGCTCTGAAATCTTACA
G--ATAATGAAT-AAA-TACATGTGAGCTTCCCGTTTTTCTATCCTGCCTCG----CC----GTAAATGAGAAGAAAAGA
AAAGGCAAAAATAATCATCCTCTATTCGAAAATCTTCCCACCAGTTGAGAAGATCAAGAAAATGACTGAACTAAAAATAC
AGAGGTATGCTGGAACAAAAAAGACTGTTTTCCAGGTTTCGGAGTTCGTTAGATCCATGTTAGAGGCCTTTGCAGCCTCC
AGAATATTTCCCGTGAGACCAACGCCAACTATCCCAGCCAATGTCCCAGCTGTATTTGAAACCCCCATCACTATGCCGGC
GAACTTTGGAGCAACATCCATGTGATTCACTGCAAACCCTGCTCTTCCTAGAGCCAGAAAACCAAGGGATACAGATGAAC
AGATCACAGTCCCTGAGGGCGTCCCGAATGAAGGAAGGGCCATAAGTGCAACAGCCGAGACAACAAACCCAATGGTGTTA
AGGAGCTTCCTTGTCTTGGTAACTGATAAGATCCTCTTTGTAATCAAGTGATCAGCAACCACTCCACCAATGTTGGAGAA
TATAAACATGTTGAAATAGGGAAGCATCTTTGACGATCCCATATCCTGGAGGCTGAGCTTAAGGGCCAGTTCGAAATAGG
TAGGCAGCCAGTTCATGATAACATACAAGGCATAGTGGAAGGTGAAGTTGTTCACGACAATTGCCCAAACAGGTAGACTG
AAGATAATTCTTCGCCATGGTATCTTTACAGTGCGAGGTGCAACAACCCCTGTTGATTGCGCCTTAATCTTCTCCCGAGA
TGCTACTTTTGGCATTGCCACTTTTGGAAGGTCAGTGCGAGGTGGCTCACTGGAGAACTTCAACCATATTACAGACCATG
CTACTCCAAGTACTGCTTCGACTAAACATACAGATTGGGGTCCCATGTGCTTCACCAGACTTGGAAAAAACAGCATGCCA
CAAGCTGCCCCGAGGTACATCCCTGAGGTGGTTAACGACACTGAGCGAGAGCGCTCCTGCGGTGGCACCCATTGTGCCAG
GACAGTG--TG--AATGGCAGGAAATATGAAACCTTGTGCTACACCAACAAAAAGG-CGAGAAAGGACCAGAATGACTAC
TCTGTTGGGGTCCAGTGGAATTAGACCGCATATCAAAGACCATAACAGAAATGACAGCAGCAGAACACGTCTCCCTCCCA
ATCTCTGAGCTGCCCATCCACCAGGAATTTGCGACAGAACATAACCATAATAGA--ACATGGAGAGTATCAGGCCCTTGT
TTGCTTGATTCACATTGATTGCATCAGCCGCAACGGTGTACGCAATCGAGAAACCCACACGCTCAATGTAACAGACATTT
GTGCAGATGAATGTCAGCAACACTATGACATAACGCTTTGGGACCTTCATCCTCGGCATCACTAGTTAACTGGAGA-TGA
ACCTCAAAGTGTTGTAGCAGTCTCAATCAGGCCGCCACTTGCTGACCTCCCACGAATATTT--ACCAGGGTTTACCATAA
ACCTGTCTTTCTTCCTTCCATCTCT
>chr1B_618
--------------------------------------------------------------------------------
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---------------------------------------------------------------------TCCTGACTTCT
TGCTGTGCAATTCACACTATTTCCTATCCCCAGGAAAATTCTTTACAAAAAGGAGATGATGTATGCCTGATAAATTACAC
AATATAATA---GTTGTAAATAGGCAAACCAGCCAGCTGGAATAACATAGTCATAGGATCATTCCAGAAAACACAATTTA
GTACAGAGAAGCGTTATTCCTCCTAAAATAACATAA--TTTAATATGTGTGGAATGCAGTCTGAGCTCTGAAATCTTACA
G--ATAATGAAT-AAAATACATGTGAGATTCCCGTTTTTCTATCCTGCCTCG----CC----ATAAATGAGAAGAAAAGA
AAA-GCAAAAATAACCATCCTCTATTCGAAAATCTTCTCACCAGTTGAGAAGATCAAGAAAATGACTGAACTAAAAATAC
AGAGGTATGATGGAACAAAGAAGACTGTTCTCCAGGTTTCAGAGTTTGTTAGATCCATGTTAGAGGCCTTTGCAGCCTCC
AGAATATTTCCTGTGAGGCCAACGCCAACTATCCCAGCCAAGGTCCCAGCTGTATTTGAAACCCCCATCACTATGCCGGC
GAACTTTGGAGCAACATCCATGTGATTCACCGCAAACCCTGCTCTTCCTAGAGCCAGAAAACCAAGGGATACAGATGAAC
AGATCACAGTCCCTGAGGGCGTACCGAAGGAAGGAAGAGCCATAAGTGCAACAGCCGAGACAACAAACCCAATGGTGTTA
AGGAGTTTCCTTGTCTTGGTAACTGATAAGATCTTTTTTGTAATCAAGTGATCAGCAACCACTCCACCAAT--TGGAGAA
TATAAACATGTTGAAATAGGGTAGCATCTTTGACGATCCCATATCCTGGAGGCTGAGCTTAAGGGCTAGTTCGAAATAGG
TAGGCAGCCAGTTCATGATAACATACAAGGCATAGTGGAAGGTGAAGTTGTTCACGACAATTGCCCAAACAGGTAGACTG
AAGATAATTCTTCGCCATGGTATCTTTACAGTGCGAGGTGCAACAACCCCTGTTGACTGCGCCTTAATCTTCTCCCGAGA
TGCTACTTTTGGCACTGCCACTTTTGGAAGGTCAGTGCGAGGTGGCTCACTGGAGAACTTCAACCATATTACAGACCATG
CTACTCCAAGTACTGCTTCGACTAAACATACAGATTGGGGTCCCATGTGCTTCACCAGACTTGGGAAGAACAGCATGCCA
CAAGCTGCCCCGAGGTACATCCCTGAGGTTGTCAACGACACTGAGCGAGAGCGCTCCTGCGGTGGCACCCATTGTGCCAG
GACTGTG--TG--AATGGCAGGAAATATGAAACCTTGTGCCACACCAACAAAAAGG-CGAGAAAGGACCAGAATGACTAC
TCTGTTGGGGTCCAGTGGAATTAGACCGCATATCAAAGACCACAACAGAAATGACAGGAGCAGAACACGCCTCCCTCCCA
ATCTCTGAGCTGCCCATCCACCAGGAATTTGCGACAGAACATAACCATAATAGA--ACATGGAGAGTATCAGGCCCTTGT
TTGCTTGATTCACGTTGATTGCATCAGCTGCTACGGTGTACGCAATCGAGAAACCCACACGCTCAATGTAACAGACATTT
GTGCAGATGAATGTCAGCAACACTATGACCTAACGCTTTGGGACCTTCATTCTCGGCATCACTAATTAATTGGAGATTGA
ACCTCAAAGTGTTGCAGCAGTCTTAATCAGGCCGCCACTTGCTGACCTCCCACGAATATTT--ACCAGGGTTTACCATAA
ACCTGTCTTTCTTCCTTCCATCTC-
>chr1A_755
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------------------------------------------------AGTCGTAGGATCATTCCAGAAAACACAATTTA
CCACAGAGAAGTGTTATTCTTCCTAACATAACATAA--CTTAATATGTGTGGGATGCAGTCTGAGCTCTGAAATCTTACA
G--ATAATGAAT-AAAATATATGTGAGATTCCCGTTTTTCTATCCTACCTCG----CC----GT-AATGAGAAGAAAAGA
AAAGGCAAAAATAATCATCCTCTATTCGAAAATCTTCTCAGCAGTTGAGAAGATCAAGAAAATGACTGAACTAAAAATAC
AGAGGTATGCTGGAACAAAGAAGATTGTTTTCCAGGTTTCGGAGTTTGTCAGATCCATGTTAGAGGCCTTTGCAGCCTCC
AGAATATTTCCCGTGAGGCCAACGCCAACTATCCCAGCCAATGTCCCAGCTGTATTTGAAACCCCCATCACTATGCCGGC
GAACTTTGGAGCAACATCCATGTGATTCACCGCAAACCCTGCTCTTCCTAGAGCCAGAAAACCAAGGGATACAGATGAAG
AGATCACAGTCCATGAGGGCGTCCCGAATGAAGGAAGGGCCATAAGTGCAACAGCCGAGACAACAAACCCAATGGTGTTA
AGGAGCTTCCTTGTCTTGGTAACTGATAAGATCCTCTTTGTAATCAAGTGATCAGCAACCACTCCACCAATGTTGGAGAA
TATAAACATGTTGAAATAGGGAAGCATCTTTGACGATCCCATATCCTGGAGGCTAAGCTTAAGGGCTAGTTCGAAATAGG
TAGGCAGCCAGTTCATGATAACATACAAGGCATAGTGGAAGGTGAAGTTGTTCACAACAATTGCCCAAACAGGTAGACTG
AAGATAATCCTTCGCCATGGTATCTTTACAGTGCGAGGTGCAACAACCCCTGTTGATTGTGCCTTAATCTTCTCCCGGGA
TGCTACTTTTGGCATTGCCACTTTTGGAAGGTCAGTGCGAGGTGGCTCACTGGAGAACTTCAACCATATTACAGACCATG
CCACTCCAAGTACTGCTTCGACTAAACATACAGATTGGGGTCCCATGTGCTTCACCAGACTTGGAAAGAACAGCATGCCA
CAAGCTGCCCCGAGGTACATCCCTGAGGTTGTTAACGACACTGAGCGAGAGCGCTCCTGCGGTTGCACCCATTGTGCCAG
GAC--TG--TG--AATGGCAGGAAATATGAAACCTTGTGCTACACCAACAAAAAGG-CGAGAAAGGACCAGAATGACTAC
TCTGTTGGGGTCCAGTGGAATTAGACCGCATATCAAAGACCACAACAGAAATGACAGCAGCAGAACATGTCTCCCTCCCA
ATCTCTGAGCTGCCCATCCACCAGGAATTTGCGACAGAACATAGCCATAATAGA--ACATGGAGAGTATCAGGCCCTTGT
TTGCTTGATTCACGTTGATTGCACCAGCTGCTACGGTGTACGCAATCGAGAAACCCACACGCTCAATGTAACAGACATTG
GTGCAGATGAATGTCAGCAACACTATGACATAACGCTTTGGGACCTTCATTCTCGGCATCACTAGTTAATTGGAGA-TGA
ACCTCAAAGTGTTGTAGAAGTCTTAATCAGGCCGCCACTTGCTGACCTCCCAGGAATATTT--ACCAGGGTTTACCATGA
ATCTGCTTTTCTTCCTTCCATCTCT
>chr7D_1797
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---------------------------------------------------------GACTTGGAAAGAACAACATGTCA
CAAGCTGACCCGAGGTACATCCCTGCGGTTGTTAACGACACCGAGCGAGAGCGCTCCTGCGGTGGCACCCATTTTGCCAG
GAC--TG--TGTGAATGGCAGGAAATATGAAACCTTGTGCCACACCAACAAAAAGGGCGAGAAGGGACCAGAATGACTTC
TCTATTGGGGTCCAGTGGACTTAGACTGCATATCAAAGACCATAACAAGAATGACAGCAACAGAACACGTCTCCCTCCCA
ATCTCTGAGCTGCCCATCCACCAGGAATTTGCGACAAAACATAACCATAATAGA--ACATGGAGAGTATCAGGCCCTTGT
TTGCTTGATTCATGTTGATTGCATCAGCTGCTACGGTGTACGCAATCGAGAAACCCACACACTCAATGTAACAGAC-TTT
GTGTAGATGAATGTCAGCAACACTATGACATAACGCTTTGGGACCTTCATTCTCGGCATCACTAGTTAATTGGAGA-TGA
ACCTCAAAGTGTTGTAGCAGTCTTAATCAGGCCGCCACTTGCTGACCTCACACGAATATTTTTACCAGGGTTTACCATGA
ACCTGTCTTTCTTCCTTCCATCTC-
>chr4A_1797
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---------------------------------------------------------GATTTGGAAAGAACAATATGTCA
CAAGCAGCCCCGAGGTACATCCCTGAGGTTGTTAACGACACCGAGCGAGAGCGCACCTGCGGTGGCACCCATTTTTCCAG
GAC--TGTATG--AATGGCAGGAAATATGAAACCTTGTGCCACACCAACACAAAGGGCAAGAAGGGACCAGAATGACTTC
TCTATTGGGGTCCAGTGGAATTAGACCGCATATCAAAGACCATAACAGGAATGACAGCAGCAGGACATGTCTCCCTCCCA
ATCTCTAAGCTGCCCATCCACCAGGAATTTGCGACAAAACATAATCATAATAGAACACATGGAGAGTATCAGGCCCTTGT
TTTCTTGATTAATGTTGATTGCATCAGCTGCTATGGTGTCCGCAATTGAGAAACCCACACAATCAATGTAACAGACATTT
GTGTAGATGAATGTCTGCAACACTATGACATAATGCTTTGGGACCTTCATTCTTGGCATCACTAGTTAATTGGAGA-TGA
ACCTCAAAGTGTTGTAGCAGTCTTAATTAGGCCGCCACTTGCTAACCTCCCACGAATATTTTTACCAGGGTTTATCATGA
ACCTGTCTTTCTTACTTCCATCTC-
>SNPs
----------------------S-S--S--------S--------------------------------------S----
--S----------------S----------------S---------------S--S-S----------------------
S-S------------------------SSSS-S-SSSS-S-S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S-S------------
-------------------------------S--------------------------------------S-SSS-SSSS
---SSS-----------------------------SS-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S-SSSSSS--
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S------S----S-----------------------S-------S-
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------SS----------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
-------------------S------------------------------------------------------------
----------S---------------------------------------------------------------------
-----S--------------S-----------------------------------------------------------
---------------------------------S--------------------------------------------S-
---------------------------------------------------SS-----------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S--------------S-----------------S--------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-------------------------
>forward_2214
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TGTTTCTATCCTGCCTCGCC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_3198
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GAG
GACTGTGTGAATGGCAG---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
