>input_sequence_81759
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--ATGGCGGCCGGTGGCATGAGCAGGGAGGAGAGGTGGAGCCTGGCCGGCGCGACGGCGCTCGTCACCGGCGGCAGCAAA
GGGATCGGGTACGTGATCATACTG-TAATCTAATCAGCTAGCTTAGGTACGAAGACGCAATTTACTGTACTATAGTCGTT
GATCGACCGATCGATGCATATATTCATG-TGCTT---------------ATCGATGGGTGGAG-A---ACAGCCACGCTA
TCGTGGAGGAGCTGGCGGGGCACGGGGCGCGGGTGCACACGTGCGCCCGGAGCGCGGCGGAGCTGGAGGAGTGCCGCCGC
CGGTGGGAGGCCAAGGGGCTCCCGGTCACCGTCTCCGTCTGCGACGTCTCCCTGCGCGCCAGCAGGGAGCAGCTCGTGGA
GACGGTCAAGTAA-------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G434900
CCAATCAAGTTAGCTCATTTTTTACCTCGTAATTCCAAGAGTTCTAGTGCTATTTTGTGGCAACAACATGAACCACCTGA
CGTAATATTCGCGCACCTAACAAATGATGTAACTTTTATACTCCTTCCGTCCTAAAATATAAAAATGTTATTAACACTAG
CATAGTGTCTAAAACGTTCTTATATCTGAAACAGAAGGAGTACCGATTTTGAATAAAGTCACGACCATGGTTTTTCCTAA
AAAGCACACCAAGAGAATTAGGGAGAGATAACAACTTACATAAAGATTCTAACAAACTCACGCACACTTTAGTACTCCCT
CCGTCCTAAAATAAGTGTTTCAACTTTGTACTAACTTTATTTTGGGACGGAGGGAGTAGTTGATTACAACGATGTAATGA
TTCAAACTCCGCCAAAAGCTCCGACAAGTACATCTAACAATAAACTTTGGATTTGTATACTACTCCCTCCGTTCGGAATT
ACTTGTCTCGGAAATGGATGTATTTAGAACTAAAATAATCTAGATACATCCATTTCTGCGACAAGTAATTTCGAACGGAG
GGAGTACAA-----------------------------------------------------------------------
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----------TTTTGCAAGGATAAGTC---AGTGGTAAAAGCTGTAAC---GGAATCGACATCCAAAACGGCAGCTATTC
TTGAGAAAACGCCACCCGCGTCCGT--TGCATGCACGTACACGTTGTCAATCATCGCCAATCTT------ATCTCCCATT
CATCGTGAGCCAGTGACCGATCGGTCTACAAATTGGAGTGTGGCTTGACTGTCTGGAGTAGGCAAATACGACTGGACACT
ATGATGCTC-----GGTGCTCGTGGAACATGTGTTTCTGCCACGCACTGCCTACGCTACGTGTGAAGCGAGGTAACTCTC
CCTAGTCCCTACGCGCCTTGTCTTACATATACTCTATCTTGCCACTCCACAGCACAGAGTATCAGAACACGCGCACGCAT
GCACAT----------------------AGAGAGATCTAGAGAAAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGATGGCGGCCGGTGGCATGAGCAGGGAGGAGAGGTGGAGCCTGGCCGGCGCGACGGCGCTCGTCACCGGCGGCAGCAAA
GGGATCGGGTACGTGATCATACTG-TAATCTAATCAGCTAGCTTAGGTACGAAGACGCAATTTACTGTACTATAGTCGTT
GATCGACCGATCGATGCATATATTCATG-TGCTT---------------ATCGATGGGTGGAG-A---ACAGCCACGCTA
TCGTGGAGGAGCTGGCGGGGCACGGGGCGCGGGTGCACACGTGCGCCCGGAGCGCGGCGGAGCTGGAGGAGTGCCGCCGC
CGGTGGGAGGCCAAGGGGCTCCCGGTCACCGTCTCCGTCTGCGACGTCTCCCTGCGCGCCAGCAGGGAGCAGCTCGTGGA
GACGGTCAAGTAAGTCTTCGACGGCAAGCTCGACATACTGGTA-------------------------------------
-------------------------------------------------------------A------------------
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-------------GTGGCCGTAACCAGTAACTTCGAGGACTTGGACTCGTCTTTCTGAAATCTTCAGAGTTTG-------
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----------------------TCA---------------GTTCAATCTGATTAACTTCAGATTG---------------
---------AGAT-------------------------------------------------------------------
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----------------------------------------------------------TGCAAATGGGCTCTAAAATTCC
ACCCAATCCAAAGAGGTTCGTCTGGA--------TTTAAAG---------------------------------------
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--------------------------------GGCTAAGTGTTTTCTCTGGACCATTCCTA----AT-------------
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----------------------------------------------------------------CTATGCAGGTGAACAA
CGCGGCGCAGATTCTAGCCAAGGCGGCCGTGGAGTGGACGTCGGAGGAGTACACGCACCTCATGGCGACCAACTTTGAGT
CGTGCTTCCACCTGAGCCAGCTCGCGCACCCCTTGCTCCTCAGGGCCTCCATCGCTGGAGGAGGTAGCATCGTCAACATA
TCCTCCCTCGGGGGGCACGCTTGGGTTCCCGGGCCTCACAATTTACAGCATGACAAAAGGTA---------ATTCCCTCC
AGTTATCCTACTTTTGAAATTCGAGTATTATTATAGCGCCCATGTTAAAATAGAAACTTTCAAATAATGACGGTTT-CAG
AAAATAGTGGTTTAATTTGTACTTTAAAGATCAAGTAAATGTCTGAAATAACAAC--------CATTTAATACTAGCTAA
TATGTCTGTGTGTTGCAATGGAA-AAAAACAATCAAGTTATGCCAAGATGAGATAAGGACTAAAATG-TTTTTCATAAAC
TACGTATGAATCATGTCATGATGAGATAAGGGACTTTTAAAAATTCGTTTCAGAAATTGAAAATGTGATGGTCTCATCAT
GACTTGATTTCCTAAGACGCCACAATGAAATACTTTTTGGCTGAGCAAAATGCATTGGCGACCATGCCATAA-CTAGACT
GATGAATGATGTGTCTTGCCTTGACCTAGCGTC-----GTTTTCCATGACGAGTAATATTATGGTATCAGAATAAACATA
GTTATGTATGGAGGC--AAATCTGATATTTAGTTATTTTCATATAGCTTGCAAAAACTAACGCTGTGTCAAATTTTTGGG
GGG
>chr3A_378
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---------------------------------------------------------AGTAGATTACAGCGACGCAATGA
TTCAAACTCCGCCAAAAGCTCCGACAAGTACATGTAACAATAAACTTTGGAGTATAT-----------------------
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----------TTTTGCAAGGATAAGTCATCAGTGGTCAAAGCTGTAATAATGGAATCGACATCCGAAACGGCAGCTATTC
TTGAGAAAACGCCAACCGCGTCCGTTTGCATGCATCGTCA------------ATCGCCAATGGCCAATCCATCTCCCATT
CACCGTGAACCAGT----GATCGGTCTACAAATTGGAGTGTGGCTTGACTGTCTGGAGTAGGCAAATACGACTGGACACT
ATGATGCTC-----GGTGCTCGTGGAACATGTGTTTCTGCCACACACTGCCTACGCTACGTGTGAAGCGAGGTAACTCTC
CCTACCTACGCCGCGACTCGC--------------------CCACTCCACAGCACAGAGTACCAGAACACGCGCACACAC
GCAC----------------------------------------------------------------AGAGAGAGAGAG
AGATGGCGGCCGGTGGCATGAGCAGGGAGGAGAGGTGGAGCCTGGCCGGCGCGACGGCGCTCGTCACCGGCGGCAGCAAA
GGGATCGGGTACGTGATCATACTG-TAATCTAATCGGCTAGCTTAGGTAGGAAGATGCAATTTACTGCACTATAGTCGTT
GATCGACCGATCGATGCATATATTCATG-TGCTT---------------ATCGATGGGTGGAG-A---ACAGCCACGCGA
TCGTGGAGGAGCTGGCGGGGCACGGGGCGCGGGTGCACACGTGCTCCCGGAGCGCGGCGGAGCTGGAGGAGTGCCGCCGC
CGGTGGGAGGCCAAGGGGCTCCCGGTCACCGTCTCCGTCTGCGACGTCTCCCTGCGCGCCCACAGGGAGCAGCTCGTGGA
GACGGCCAAGCAAGTCTTCGACGGCAAGCTCGACATACTGGTA-------------------------------------
-------------------------------------------------------------A------------------
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-------------GT--------------------------------CGTCTTCCTGAAATCTCCAGAGTTTG-------
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----------------------CCA---------------GTTCAATCTGATGAACTTCGGATTG---------------
---------AGAT-------------------------------------------------------------------
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----------------------------------------------------------TGCAAATGGGCTCTAAAATTCC
ACCCAATCCAAAGAGGTTGGTCTGGA--------CATAAAG---------------------------------------
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--------------------------------GGCTAAGTGTTTTCGCTGGATCATTCCTACTGTAT-------------
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----------------------------------------------------------------ATATGCAGGTGAACAA
CGCGGCGCAGATTCTAGCCAAGCCGGGCGTGGAGTGGACATCGGAGGAGTACTCGCACCTCATGGCAACCAACCTAGAGT
CGTGCTTCCACCTGAGCCAGCTCGCGCACCCCTTGCTCCTCGGGGCCTCCATCGCTGGAGGAGGGAGCATTGTCAACATA
TCCTCCCTT-GGGGGCACACTTGGGTTCCCGGGCCTCGCAATTTACAGTATGACAAAAGGTA---------ACTCCCTCC
GGTCTTCCTG-TTTTGAAATTTGAGTATTATTATAGCGCCCATTTTAAAACTGAAACTTTCAAATAATGACGGTTT-CAG
AAAATAGTGATTTAATTTGTACTTTAAAGATCAGGTAAATGTCTGAAACAACAAC--------CAT--------------
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---
>chr3D_565
AGAGAGAGATGGCAGCCGGCGGCATGAGCAGGGAGGCGAGGTGGAGCCTGGCCGGCGCGACGGCGCTGGTCACCGGCGGC
AGCAAGGGGATCGGGTACGCAATTTTATAATCTTCTTACGTACGAGCATGCTATGTACAGTCCTATGTACGTATACTCAT
GTGCTTGTCTGCATGACGGTGCCGATGGGTGGAGAACAGCCACGCGATCGTGGAGGAGCTGGCGGGGCACGGGGCGCGGG
TGCACACGTGCGCCCGGAGCGCGGCGGAGCTGGAGGAGTGCCGCCGCCGGTGGGAGTCCAGGGGCCTCCCGGTCACCGTT
TCCGTCTGCGACGTCTCCCTGCGCGCCAGCAGGGAGCAGCTAGTGGAGACGGCCAAGCAAGTCTTCGACGGCAAGCTCGA
CATGCTGGTAACTAATAACTTCGAGGACTTGGGCTTATCGTCTTTCTGAAATCTCCAGAGTTCATCGGTTCAATCCGATT
AAGTTCGGATTGAGAGTATCTCTAGCAAACCCCGTAAAAAAGCTGAACCCGTATAATTAACGAAAAAGAGTTTATTCGTT
TTAGATTATAAAGCAACCGCACCAACAACATCCGACAACAACAACGATCTCAAAGTTCAAGTCGAAAGAGAGGCAAAGCA
AAACAAAGTTGAAGAGGTCAAATAGGATCAGCTGGGGGCACAGCAAAACAAACCCCTAAATGAAAGTAGCAAGCTAGCTA
ATCTGGCTCTGGCGGTGGAGGGGGTAGCGGCGGCGCCATGGATCCGGCAGTGGCGCGTAGACTTGCAGTGATCCTGTCGA
TGTTGCCCCGATCGGGCCGCTTGCTAAGCGGTCTCTACAGCTGTAAGAAACTACACAATTTGTAAATCGAGTCAGTCGCA
CGAGATGGAATTACATGCTCAATCACTAATTTATTACGCACAGTCCATAGCGTCCAGGCCATCGGGCCACAGTGGCGGAG
ACAGGCCTGGGGCGGCTAGGGCTATAGGCCCAGGCCTAGAAACAACTTCCTTTGTAATTTCTTCATGCAAAGCATAGAAA
ATCATAGAAGTTTATCACTCAACATGGCATAGCCCCAGGCGTAATCTGCATCTAGCTCCGCCACTGGCGCCCACCACAAC
CGAAAGGGTGGGGCGCATCCTGGCCTCCCGCTTAGGACCGCCTGGAACAAGTCAGGGAGATTGTCGTGGCACCAGGCGCC
CCCAACCGTATCCCCGGAGGCAACTCCAAAAGAAGATCGTCGTCGGGCATCGGAAGAAAATATGGTTGGAGTCTTCCGGC
ACTCCACACAACCTAGGCCATTCCGCTTACGGACCTCAGTACCCGAGGGTAAGCAGCCACACACCCATTACCAAAGAAAA
ATGCGGATCTTCAAAGGGAGCTTAATCTCCCAGAGGAGAGTCATCTCGGTCGGTCCCAGGGTAGCCACTAGCACATGGTA
TAGGGATTTGGCAGAAAAATCCCACCTGGTTCGAGAGACCAGGAAATCGAATCTTCCTCAAGGGAGGGAGAGTGGAGGGC
AATGCATTGAAGCAGTTCCTCCCATTGGTCCCGCGCTAACGGGTCGAAGGTGCGGCGGCAGACTATGCCCCCCAGGTCCA
CCAGGGCCGCACACAAGGTGTGTTGCGGGCGGGCGCAAATACTGAATAACGCGTAGAACCGTTCAGTGAACGGTTTATAG
CCTGACCACCGGTCTAACCAAAACAAGTTATTAGTACTCGTCCCCACCGTGATTGAAGATCCTATCCGAAGAACCAGCAG
TAGTTGAATGATTGAGGACCCATAGAACCCGTATAATTCCGGCGAGTATACAGGTTTGGCCCATTTTTCTGTCCTGAATA
GACACCGTATCCGCGGCCCGGCCCGTAAAAATTTTACCGTGGCCCGCAAAAACTCTCTCCCCACCACTATATATGCGGTT
TCACCGCTCGGATACGGGTCAAACCCTATCCGCCTCCGCCGCGATTCCCCTCCTCCGCTGACCAATTTCTCGCCGTCGGC
GAGCCTGAAAAAGCCATGGATGGCTACGGGAGCTCTGGGGATGACGCGGAGCGCCGCCGCTGCGCCAGATCCGATACCGC
ACACAAGCGGGGTGCGTGGAGGTGGCTCAACCGTGGGATCCAGCCGCCGCCGGCGTTCAAACGCCGCGAGCTGGTCGAGT
ACGAGCGCGAGCTCTCCCGCCGCAACCACGCCTCCTCTGTCGCGGGGAGCTCGTCCGCAGGTGCCTCGAGCTCGCGGCTC
ACTCCGGTGAAGAGGGAGCCGGAGGAGCTCGGGCCGCTCGCCGTCAAGCTCGAGGCCGACGCGCCGCCGCGTCGAGGAGT
GATCGGCCCCGAGGACTACCTCCCCCGGGGCAGGAGGAGCACCTAGAGCGCGTTGTCATGGAACGTTCGGCGAGGGAGCA
GGAGGAGGCCGAAGCGCACCGCCGCCGTGAGCTCGACTACGAGCAGATGTTCCTCCAGACGGGCCTCGCGGCGTCGCAGG
CGCACGCGTCTAAGGAGGCGGACCTGCGCGTGATGAAGGTGGAGCAGACCAAGTTCTTCATCGACCTTGACTCCTCCGAC
GAGGACTGAGCTCCACTGGCTCCTCCGCCACGTCGTTGCCTCCGTGAGCTCGTCGATTTTGGTAGCTAGGCTCGGGCCCG
CAAATTCCCCCACTAGTATGATCAATGTAGATGAACTATGTATGACCAATGTAGTATGTAGATGAACGAATGTATGATCA
ATGTAGATGGACTATGTATGACCAATGTAGTATGGAGATGAACGAATGTATGATCAATGTTGTTGCAAGTTTCTCTCGTG
AATGTTTTTTTTTTAATTTTACAGTTTCATATACGGAGTCTGATCTGTAGCGCACGAATTCGTCCCGCAAATCTCATCTG
CAACGAACTGTAGACGCATTTTGTGGATCGACATTATACAGGGTCTTGCTAGAGATGCTGTGAGATCACACCCGCCGTCC
AGAGACTGTAAATTGGCTCTAAAATTCCACCCAATCCAAAGAGGTACACATGGGTTTACAAGGCTGACCATTCCTACTGT
ATATATGCAGGTGAACAACGCGGCGCAGGCTCTTGCCAAGGCGGCCGTGGAGTGCACATCAGAGGAATACACGCACCTCA
TGGCGACCAACCTAGAGTCGTGCTTCCACCTCAGCCAGCTCACGCACCCATTGCTCCTCAGGGCCTCCATCGCCGGAGGA
GGTAGCATCGTCAACATATCCTCCCTTGGAGGCACGCTTGGGTTCCCCGGCCACGCACTTTACGGTATCACAAAAGGTAA
TATGCGCGGAAGCTTTTTTCGGTAATATGCGCTATTCCCTCCAGTAGTATACTTCAAAATTACACCGTCCATGTTAAAAA
TAAAACTTTGAAATAATGACAGTTTAAAAAATTAGTGCTTTAATTCGTACTTTAAAGATCATTTCAATGTCCAAAACACC
GATCATATTTTCATTTAATATATTTGTAAGGTCCAAAAAATGAATGTTGTACATTTCGATAAAAATTCACACGCATGATT
GTAGGTGTTCAATATCAATATTTCTAGATATCAATAGTCAAGTGATTATTTTGAAAATTTGACTCTTTCCATGCCTCAAA
CGACGATGTTTTTTCGAGACGATCGCACTACGGCATTTGAACTATCCAACTAACTATTTGTGAAAATACTCAAAGATGTT
CTAATTTAAGGTATTCATGGCCATAACCACAACTCGATCCAAATTTCAACTTAGGCATGAAACTGACATGTCTTTTGTGC
CTCTAATTTACCGCCTGATATGCAGGAGGAATCAACCAGCTTACAAGGAGCCTCGCTACTGAGTGGGCCCAGAACAAGAT
TCGGGTGAATTGTGTCGCCCCGGGCGTGACCAAGAGTGACATGTTAAACAGTGTAGGCACCGACCATGTCTTTATTTAAA
TTACATTAGAGAAAATACACAGGCAGAACTAGTTAACCTAATTAGTTATGACTCTTTTGCGTGTATAGTGCTGGAGATTA
GAGAGAACGAGTTGGCAGAATCCTACTACACAACTCTTTAGTATCGGGTTTTCTAAGAAACAAATCATTTGGATAACTGA
TCATTTGTGAGTGGAACAGCTCGCACCGGACATTTTAGAGAAGGAGGTGGCAAGGATTCCGATGCGGCGGGCAGGCGAGC
CAGAGGACGTGGCTGCAGTGGTGTCGTTCCTCTGCATGCCAGCAGCATCCTTCGTCGCTGGCCAGGTCATCACCGTCGAT
GGTGGTCGAACAATTAGTGCTTAGTTAATTAACGGTACCTCACCGATAAACTCGTGTGCATGTTGATCAATTCGTAAAGT
AGCAGGTGAGTACTCCCTCCATCCCATTAGCTTGAAAAACGTTTTTATATTATGGCACTGAGGGAGGAGTTAGCAAGGAC
CTGAGTGTTGTCCGCTAGTATAATTATTTTGCTACATTGTTGATTTGTTGTTAGTCTTTATTGTATTTCTAAAGTAGATT
TGCCTATTTAACTAGCCAAAGCGTGGCCGCACCCATGATGCATGATCTTGGATGTTGGCTTTGCCGTTATTGTGCTTTGT
GTAATATTGGTGTACAAGTTATAAAGATGTGTACATTTTGGAACCGAACCGATATAGAGCACCCTATAGTGGTGATATTC
ATCCCTTGGAGTGAAGCCTCTCAACTATTGATCTTCGGTATAATACATATAATTAATTTTTCCCTAAACTTAAAAGGTAA
TTATCCATGGCACAATCGAACACAACTATTGGATCTTAACAAGGGTATTCGATTTTGCCCCCGATACGCACCTACATATA
TATGGTTCACATAATATACTATTAAACCATAAAGAGGCATATAATCAAGGGCAAATCTTTGAATTGTCATGCCAAAAAAA
AATTCTCCATGGAGAAAGCTTAAACGTAGTAGAAGGATGAACTATGTTCCTTGCCACAAGACCATCCAATGCAGAAAAGC
TTCCTATGCCCTTACTGTAGAAGCACCCAATGGCCCAAAAGGTATATTTAAATTATTACTACTACCATACTAAAGAATTA
CGCGCAACAAATCCCTAAAAAAAGAATTACACGCAACAACAGAAATAAAGTATCTAATGATTCCGTCTGATTCAAAGCCC
CCAGCCCCAATGCCCAAACCAATAACCGGATCCGGACAAACAGGAGGTCGTGAGCATCCCAGGGTGGCAGGGAAGACTGA
TGAATGTGGGAGAGGACCGCCATCTTCAAATCCGGTCAAAGGGCAAACCCAGGATCAAGCTGCACGCTCTTCGTCATCAC
GCCGCCCAGCGACCATAAATGGCGCACACCAACATTCCATGCCAGCCCCCATCATGGGGAAGGAGGCGTGTGCCCCAATA
TGACCGTTGCCACGGATCCAAGCACTCCACACGCGGACCACCACCACCATGCGGCCATCACAGCTCCATCGTGTCATTGT
CCTTGGCATGCGCGCCGCTGCCAAGGCACCCCGCGCGAGCACCGCAACCCAGCTCTTCTTCGCATCCGACGCTACTCGCC
ACCGGCCAGGGAGGACGAAGGCCCCCCGCCACCGACCATGCGAGGGGCTTTGCCCAGGTGACCCAGACCAGCGGTGGCGG
GAGAGAAGAGGAAAGGAGGGGAGAAGAGGCGAAGTGATTGAGCTGCCACCTGAGTCGCCCGCAGGGGACGACGCGGGGGC
CTAGGGTTTCCCTTGTGTATGACGTGACGTACTACCCTAGATCAAGGTACATAAAAGATGGAAATATATCAGGTTAGCAT
GCAAATAAAGTACATGTTGCTATTATGTGCAAAAGTTGTCTACCTACTTACTTGCATGCCTCAATTTCTACCCATGGAAG
ACAACTAGAATGACAAACTCAGAGAGTAAGCATGTGTCGCACCTTGTATACTTATCTAGAAGGCAAAAGGACAACATCGG
CTAGAGCTAATCTTCCATGTAGCAACATCCTTAAGATGGTCGTTCAACCCACTCGATGTTGGGATAACATATGTGAATAA
TGAAACTAATATTAATTCACAACTTAATTTATTGCAGATGGATTTGAATTCTCTTGTGTGATGACCATGCAAGATTTCCA
GCCGCTAGCAATTGCCCAATTCCAAATATCAATTCAACAGCTATGACGGAGCCGATAGCATTGAGAAACGGTCTAATCCT
AGTAGGGCAAGTGGGATGCAACAAGCTTTTGGTACTCTAACTGTATGGATGTCATTGACACTATGAAGAACTATGGGGAC
TCAATCGATGTTGCTGCTGCAGTTTATGAAGAATGATCCTTCCTTTGTAGAGGTTTTGCTATTGTCAAGTTCGATCACTG
CCCTAGAGAAGCCAATCAAGTTAGCACATTGTTTTACCTCGATATTCTAAGAGTTCTAGTGCTACTCTGTGGCAACAACA
TGAACCACCTGATGTAATATTCGCGCACCTAACAAATGACGTAACTTTTACGCCATTTTTGATGAAGTCGCAACAATGGC
TTTTCCTAAAAAGCGCGCCAAGAGAGTTAGGGAGAGATAACAACTTGAATAAAGATTCTAACCAACTCATGCACACATTA
TCCTCTATAGATTACAACGACGCAATGATTCAAAGTCCGCCAAAAGCTCCGACAAGTGCATCTAACAGTAAACTTTGGAT
TTATATACAATTTTTCAAGGATAAGTCATCAGTGGTCAAAGCTGTAATAATGAAATCGACATCCAAAACGGCAGCTATTC
TTGAGAAAACGCCACCCGCATCCGTCTTGCATGCACGTACAC----------ATCGTCAATCGCCAATCCATCTCCCATT
CACCGTGAACCAGT----GATCGGTCTACAAATTGGAGTGTGGCTTGACTGCCTGGAGTAGGCAAATACGACTGGACACT
ATGATGCTCAGCTCGGTGCTCGTGGAACATGTGTTTCTGCCACGCACTGCCTACGCTACGTGTGAAGCGAGGTAACTCTC
CCTAGTCCCTACGCGGCTTGTCTTACATATA-----TCTTGCCACCCCACCGCACAGAGTATCAGAACACGCGCACATAG
AGAGATCTAGAGAAAGACAGACAGAGCGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGATGGCGGGCGGTGGCATGAGCAGGGAGGAGAGGTGGAGCCTGGCCGGCGCGACGGCGCTCGTCACCGGCGGCAGCAAA
GGGATCGGGTACGTGATCATACTG-TAATCTAATCAGCTAGCTTAGGTACGAAGATGCAATTTACT--ACTATAGTCGTT
GATCGACCGATCGATGCATATATTCATG-TGCTT---------------ATCGATCGATGGAATC---GCAGCCACGCGA
TCGTGGAGGAGCTGGCGGGGCACGGGGCGCGGGTGCACACGTGTGCCCGGAGCGCGGCGGAGCTGGAGGAGTGCCGCCGC
CGGTGGGAGTCCAGGGGCCTCCAGGTCACCGTCTCCGTCTGCGACGTCTCCCTGCGCGCCCACAGGGAGCAGCTCGTGGA
GACGGTCAAGCAAGTCTTCGATGGCAAGCTCGACATACTGGTA-------------------------------------
-------------------------------------------------------------A------------------
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-------------GT--------------------------------CGTCTTCCTGAAATCTCCAGAGTTTG-------
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----------------------TCG---------------TTTCAATCTGATTAACTTCAGATTGAGATCACGGCTGGCC
GACCCCCAAAGAT-------------------------------------------------------------------
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----------------------------------------------------------TGCAAATGGGCTCTGAAATTCC
ACCCAATCCAAAGATGTTCGACTGGA--------TTTAAAG---------------------------------------
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--------------------------------GGCTAATTCTTTTCTCTGGATCATTTCTA----AT-------------
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----------------------------------------------------------------CTATGCAGGTGAACAA
CGCGGCACAGATTCTAGCCAAGCCGGGCGTGGAGTGGACATCGGAGGAGTACTCGCACCTCATGGCGACCAACTTAGAGT
CGTGCTTCCACCTGAGCCAGCTCGCGCACCCCTTGCTCCTCAGGGCCTCCATCGCTGGAGGAGGTAGCATCGTCAACATA
TCCTCCCTC-GGGGGCACGCTTGGGTTCCCGGGCCTCGCAATTTACAGTATGACAAAAGGTA---------ATTCCCTCC
GGTTATCCTACTTTTGAAATTTGAGTATTATTACAGCGTCCATGTTAAAATTGAAACTTTCAAATAATGACGGTTTTCAG
AAAATAGTGATTTTATTTGTACTTTAAAGATCAGGTAAATGTCTGAAACAACAATCATGCTTTCATTTAATACTAGCTAA
TATGTCCGTGTGTTTCAGTGGGAGAAAAACAATCAGATTATGCCAAGATGAGATAAAGACTAAAATGTTTTTTCATAAAC
TACGTATGAATCATGTCATGATGAGATAAGGGACTTTTAAAAAGTCATTTCAAAAATTGAAAATGTGATGATCTCATCAT
GACTTGATTTCCTAATACGCCACAACAAAATACTTTTTGGCTGAGCAAAATGCACTCACGGACCCTGCCTTAGCTAGACT
GATGAATGTTGTGTCTCGTGTTGACCTAGTGTCGCGGTGTTTTTCATGACCAATAAAACTCCGGTACCAGAATAAACATA
GCTATGTATGGAGAAAAAAATCTGATACTTAGTTATTTTCATATAGCTTACAAAAACTAAC-------------------
---
>chr1B_947
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----------------------------AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGATGGCAGCCAGCAGCATGAGCAGGGACGAGAGGTGGAGCCTGGCCGGCGCGACGGCGCTCGTCACCGGCGGTAGCAAA
GGGATCGGGTACGTACGCAATCACATAATCTAACCAGCTAGCTTTCGTACGTACGAGGATCCTAGTTCATCGAT------
--TCGACCGATCGATGTATCATGGAGTACTACTTAACT-GCATGGCCGCATCGATGGGAAACGCTGACACAGCCACGCGA
TCGTGGAGGAGCTGGCGGGGCACGGGGCGAGGGTGCACACGTGCGCCCGGAGCGCGGCGGAGCTGGAGGAGTGCCGCCGC
CGGTGGGAGGCCAAGGGGCTCCCGGTCACCGTCTCCGTCTGCGACGTCTCCCTGCGCGCCCACAGGCTGCAGCTCCTGGA
GACGGCCAAGCAGGTCTTCGACGGCAAGCTCGACATACTGGTA-------------------------------------
-------------------------------------------------------------A------------------
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-------------GTGGAAGTGGTAACGCGCGCAG---------------------------------------------
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--------------CGACCAACTCT---------------GTTCTTTCTGATCCATGGCGACCAACTCTAC---------
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---------------------------------------------------------------GCTATGCAGGTGAACAA
CGCGGCGCAGATTCTTGCTAAGGCCAGCGTGGAGTGGACATCGGAGGAGTACTCACATCTGATGGCGACCAACCAAGAGT
CGTACTTCCACCTCAGCCAGCTCGCGCACCCCTTCCTCCTCAATGCCACCATAGCCGGAGGAGGTAGCATCGTCAACATA
TCCTCCCAT-GCCGGCTCACTCGGCTTCCCTGGCCTCGCGCTCTACAGTATGGCAAAAGGT-------------------
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>chr3A_958
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---------------------------------------GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGATGGCGGCCGGTGGCATGAGCAGGGAGGCGAGGTGGAGCCTGGCCGGCGCGACGGCGCTCGTCACCGGCGGCAGCAAA
GGGATCGGGTGCGCA-----------ATTCTATATAACCTTCTTACGTACACACATGCTATGTAC------A--------
----------------CGTATACTCATG-TGCTTCTGTGGCATCATGGTGTCGATCGATGCAA-C---GCAGCCACGCGA
TCGTGGAGGAGCTGGCGGGGCACGGGGCGCGGGTACACACGTGCGCCCGGAGCGCGGCGGAGCTGGAGGAGTGCCGCCGC
CGGTGGGAGGCCAGGGGCCTCCCGGTCACCGTCTCCGTCTGCGACGTCTCCCTGCGCGCACAGAGGGAGCAGCTCGTGGA
GACGGTCAAGCAAGTCTTCGACGCCAAGCTCGACATACTGGTA-------------------------------------
-------------------------------------------------------------ACTAATAATAACTACATGG
ACTTGTACTTGGCCCTCTTTCTGAGAGTACTTACAATAGGAGTAACATAGATAGATGGTAAAATCACATATCTCTAGGCA
AAATAGATGGAGAATGTGACGAGTAATTAATGAGGGAATATGGGTATGTGATAACATAGTTAGTTATTGCAACATCAAAT
ATAACAAGACAAGATGAGTCTACAACCTAATAAATAAAATATTACATGACACCACACATATGTTACTCCAAGATAGTAAT
ATAGAGTAGTAACATATGCTAATCTTACTACCCATGACTAG------------TCTAAAATCTCCAGAGTTCG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TATGTTCAACCTGATTAAGTTTA---------------GATTG---------------
---------AGATCAGGCCAGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGTCCAGAGACTGCAATTGGGCTCTAAAATTCC
ACCCAATCCAAAGAGGTTCATATAGGTTTTACACTTTACGG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------GGCT--------------GACCATTCCTATTGTAC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATATTCAGGTGAACAA
CGCGGCGCAGGCTCTTGCCAAGGCGGCAGTGGAGTGCACATCGGAGGAGTACACGCACCTCATGTCGACCAACCTAGAGC
CGTGCTTCCACCTCAGCAAGCTCACGCACCCCTTGCTCCTCGGGGCCTCCATCGCCGGAGGAGGTAGCATCGTCAACATA
TCCTCCATT-GGGGGCACGCTTGGGTTCCCGGGCTACGCACTTTACGGTATCACAAAAGGTAGTATGCGCTATTCCCTCC
AGTTTTCCTACTTCTGAAATTCCAGTACTATTAT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr1D_966
CAGAGA--------------------------------------------------------------------------
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------------------------------------------------------AGAGAGAGAGAGAGAGAGAGAGAGAG
AGATGGCAGCCAGCAGCATGAGCAGGGACGAGAGGTGGAACCTGGCCGGCGCGACGGCGCTCGTCACCGGCGGCAGCAAA
GGGATCGGGTACGGACGCAATCACATAATCTAATCAGCTAGCTTTCGTGCGAGTATATACATTCATGT------------
------------------TATCATGGAG-TACTAAACT-GCATGGCCGTATCGATGGGAAACGCTGACACAGCCACGCGA
TCGTGGAGGAGCTGGCGGGGCACGGGGCGCGGGTGCACACGTGCGCCCGGAGCGCCGCGGAGCTGGAGGAGTGCCGCCGC
CGGTGGGAGGCCAAGGGGCTCCCGGTCACCGTCTCCGTCTGCGACGTCTCCCTACGCACCCACAGGGCGCAGCTCATGGA
GACGGTTAAGCAGGTCTTCGACGGCAAGCTCGACATTCTGGTA-------------------------------------
-------------------------------------------------------------ACCAACT-----ATCTCAG
CGTAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TTTTTTTTTCCGACAAAGGCCGCTT
TTCATCGGCTCGTAGTAAGCATCACGGGATACAAGCACAATAAAAACA-----CCTGAAATCTCCAAGCCCTGGTATCCG
ATACTAAAGAGGCGATGTCTATACGGTACGCATCATTAGGAGGAAGGAGGAGCCGCTTGAGAGCTGTCCACCCCGCGTCG
TCCTCCCCCTAGGGCGACTCGGGCGGCCAGAAACCTAGCCGCCGCCGCCGCAAACTCCCTCCTCCTCTCCCTCCGCCGCC
GCCGGAAGACGCCGCCGGGCTAAGCCCGGGGGCCGACGGCGGTGGCGGGGCATCTCCTCTCTCGCGCGTTTCCGGGGTGG
GGCGGAACCCAAGGCGTGTGGTGGCGCGACCGATCTGAGATCTGCGGCGCGGCGGACGGCGTGGAGGGCCTGGTGGTCTC
GTCGGCGGCACCTCCGATCAGATCT---------------GTTCTGACCGGTGCAGCCGGCGGTGGTGGTCATCTCTTCC
GTCAGAGGTGGTCGGCCTGAGGATGGGTGTTCGAATCTCGGGATCCGTCATCTGGCACCCACTGCGAGTCGGGGAGACGT
AGTTGCCGGTGAAAACCGAGCCGATGGCGGGTGATGGCGGCGTTCTGACCCACTCGTATTACTCCAGGGGAAACCCTAGG
ATCTGGTGCTCCAGACCGGACGATGGCGGCACTGCGGTGTCGTTTCTCTCTTGGAAGCATCGTTTTGTGGAGCAGCGATG
GAAGTCAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGACCGACAGG
TGCTACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGACAGATCCTCCAAGGGCTTCAAGCTGTGTCGGCTGGTGG
TACTTGGCAGCATGACGCTGAGGTGTATCAGTGACGACCGCGACTGTGTTCAGTTGTTTGCGCGCAGGGAGGAGGTGACG
TTGGGCGCCGTGATGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGATGGAGCGGTGG
CAGTTGGCGGCGGCGGCCTCTGGGAGCACGCCGGATCAGTGTGTGCCCCGGACCCGGCAAATGGCTAGGTTGGGGTCTCA
GGTCTTAGATGTTAGGCTTGGCTGCGATATCTGTTTGGTATTAGGCTCAGACTATCTACGCACCTTCATCAATTGAATAG
GTGTAGCGACAGTTTGTTACTTAGACGGTGGCTTTAGTCTTACTGTTATATGACTTTGTAAGGTCTTGTGAGAATAATTA
ATAAAGTGGCCGTATGCATCGCCCAGATGCAGAGGCCGGGGATAATCCTTCTTTAAAAAAAATGCTATGCAGGTGAACAA
CGCGGCGCAGATTGTTGCCAAGGTGAGCGTGGAGTGGACATC---GGAGTACTCACACCTGATGGCGACCAACTAAGAGT
CGTACTTCCACCTCAGCCAGCTCGCGCACCCTTTCCTCCTCAACGCCTCCGTCGCCGGAGCAGGTAGCATCGTCAACATA
TCCTCCCAT-GCCGGCTCACTTGGCTTCCCTGGCCTCGCGCTCTACAGTATGGCAAAAGGTA------------------
--------------------------------------------------------------------------------
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---
>chr3B_991
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------------------------------------------------------------------------AGAGAGAG
AGATGGCGGCCGGCGGCATGAGCAGGGAGGCGAGGTGGAGCCTGGCCGGCGCGACGGCGCTCGTCACCGGCGGCAGCAAG
GGGATCGGGTACGCA-----------ATTT--TATAATCTTCTTACGTGCAAGCATGCTATGTACATTTGTA--------
----------------CGTATACTCATA-TACTTATCT-GCATGACGGTGTCGATTGATGGAATC---GCAGCCACGCAA
TCGTGGAGGAGCTGGCGGGGCACGGGGCGCGGGTGCACACGTGCGCCCGGAGCACGGCGGAGCTGGAGGAGTGCCGCTGC
CGGTGGGAGGCCAAGGGGCTCCCGGTCACCGTCTCCGTCTGCGACGTCTCCCTGCGCGCCAGCAGGGAGCAGCTCGCGGA
GACGGTCAAGCAAGTCTTCGACGGCAAGCTCGACATATTGGTGGCTACTCCTTTTTTTTAACTACTCCGTTTATCTCAGT
GTCATAAAAAACTTCTTACATTATGGGACAAAATGAGTAATGACTTCGAGGGCTTGGACTTA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GT--------------------------------CGTCTTTCTGAAATCTTCAGAGTTCG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------TCG---------------GTTCA---------------GATTG---------------
---------AGATCATGGCCGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGTCAAGAGGCTGCAAATTGGCTCTAAAATTCC
ACCCAATCCAAAGAGGTTCATATGGG--------TTTACAG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------GGCT--------------GACCACTCCTACTATAT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GTATGCAGGTGAACAA
CGCGGCGCAGGCTGTTGCCAAGGCGGCTGTGGAGTGCACATCAGAGGAGTACACGCACCTCATGGCGACCAACCTAGAGT
CGTGCTTCCACCTGAGCCAGCTCACGCACCCCTTGCTCCTCGGGGCATCCATCGCTGGAGGAGGTAGCATCGTCAACATA
TCCTCCCTT-GGGGGCACACTTGGATTCCCGGGCCTCGCGATTTACAGTATGACAAAAGGTG---------ATTCCCTCC
GGTTTTCCTACTTTTGAAATTCGAGTATTATTATAGCGTACATGTCAAAATTGAAACTTTCAAATAATGACGGTTT-CAG
AAAACAGTGATTTAATTTGTACTTTAAAGATCAGGTAAATGTCTGAAACGATAACCAT----------------------
--------------------------------------------------------------------------------
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---
>chr3B_993
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--------------------------------------------------------------------------AGAAAG
AGATGGCGGCCGGCGGCATGAGCAGGGAGGCGAGGTGGAGCCTGGCCGGCGCGACGGCGCTCGTCACCGGCGGCAGCAAA
GGGATCGGGTACGCA-----------ATTT--TATAATCTTCTTACGTACAA-----------CATGC------------
------------------TATACTCGTG-TGCTTATCT-GCATGGCGGTATCGATCTATGGAATC---GCAGCCACGCGA
TCGTGGAGGAGCTGGCGGGGCACGGGGCGCGGGTGCACACGTGCGCCCGGAGCGCGGCGGAGCTGGAGGAGTGCCGCCGC
CGGTGGGAGGCCAAGGGGCTCCTGGTTACCGTCTCCGTCTGCGACGTCTCCCTGCGCGCCAGCAGGGAGCAGCTCGTGGA
GACGGTCAAGTAAGTCTTCGACGGCAAGCTCGACATACTGATG-------------------------------------
-------------------------------------------------------------ACTACTCACTTCATCTCAG
CGT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CAAAAGACGTCTTATATTATGGGACAAAGGAGTAAT
AATTTTGAACTTAGT--------------------------------TGTCTTCCTGAAATCTCCAGAGTTCG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TCG---------------GTTCA---------------GATTG---------------
---------AGATCACGCCCGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CGTCCAAGGACTGCAAATTGGCTCTAAAATTCC
ACCCAATCCAAAGAGGTTCATATGGG--------TTTACAG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------GGCT--------------GACCACTCCTACTGTAT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------ATATGCAGGTGAACAA
CGCGGCGCAGGCTCTTGCCAAGGCGGTTGTGGAGTGCACACCGGAGGAGTACACGAACCTCATGGCGACCAACCTAGAGT
CGTGCTTCCACCTGAGCCAGCTCACGCACCCCTTGCTCCTCAGGGACTCCATCGCCGGAGGAGGTAGCATTGTCAACCTA
TCCTCTCTT-GGGGGCACGCTTGGGTTCCCATGCTACACACTTTACGGTATCAAAGAAGGTA---------AT-------
--------------------------------------------------------------------------------
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---
>SNPs
-S--SS-SS-SSSSS-SSSSSSS-SSSSSSSSSSSSSSSS--SSSSSSSSSSSSSS-S-S-SS-SSSSSSS---SS-S-S
S-S--SSSSSS--SSSSSSSS-SS-S--SSSSS-S---SSSS-SSS-SSS-SSSSS-S-SSSSS----SSS--SSSSS-S
SSSSS-----SS-SSSSSS-SSSSSSS-SSSS----SSSSS--SSSS-SSSSSSSS--SSSSSSSSSSSSSSSSSS-SSS
SSSS---SSSSSSSSSSSSS-S-SSS--SSSSS-SSSSSSSSSSSSSSSSSSSS-SSS--S-SS-SSSSSS--SSS-SS-
S-SSS--SSS-SSSS-SSS-SSS-SSSSSSSSSSSSSSSS-SSS---SSSS-SS-SS---S-------S---S-S-----
------------------------------------------------------SS-S-S-S-SS-SSSSSSSSSSS---
-SS-SSSSSSSS-SS-S--S-S-SSSS---SSSSSS--SSSSSSS-SSS-SSS-SS-SSSSS--SS-SSS-SS-SSS-SS
SS--SSS-------------------------------------------------------------------------
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------------------------------------S----------S--------------------------------
------------------------------------------SSSSSSSSSS----------SS----------------
--S-----S-----SSSS--------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S---------------SSSSS----------------------------------------S--S
-----------------------------------SSS-----S---S--------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
------------------------------------------------------------------------------S-
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-----------------S----S----S---SSS-SSS-S-SSS-SS---------------------------------
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---------------------------------------S-----------------------------------S----
--------------------------------------------------------------------------------
---------S--------------------------------------S-------------------------------
---------------------------------------------------S----------------------------
---------S-----------------------S--------------S-------------------------------
------S-------S--S---S-------------SS-------------------S-----------------------
-------------------------------------------S--S-----S-----------------S---------
---------------S---------SS---------------------------S-SS--SS-SSSS-S-S---------
--------S-------S-SS---------S-------------S------S-S---S-S-SS----S-------------
-S-----------SS------------S---------------------S-----------SSSSSSSSSSSSSSSSSSS
SSS
>forward_6818
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------------------------------------------------------------------------------TT
CATCGTGAGCCAGTGACC--------------------------------------------------------------
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---
>reverse_9356
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---------------------------------------------------------------------------TGAGT
CGTGCTTCCACCTGA-----------------------------------------------------------------
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---
