>input_sequence_81755
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----------------------------------------------------ATGGAGATCGGCGCGGGCGCTGTCCCGG
GACGTGTCGCCG------CAGCGGTCTTGCTCCTCGTGGGATCGGCGGCGATCGCTGCTGCAGCGGGCGGCGTCGGCGTG
GGCAGGCCCTGCTTCGACGCGTGCTTCGACCAGTGCGTGCCGCGCGAGGAGTTCTGGTTCTGCCAGTTCTCCTGCTACCA
CAGGTGCTCCGGCGGCCGTTCGCCGGCGGCGGTGAAGGCTCGCGACGGCGACAGGGGCGATTGCGAGCACTCGTGCGTGC
TCTCCATGTGCGGCCAGCTCCACCCGGACAGCAAGATGATGGCCGTGTGCCTGGACACGTGCCACAAGAGCTATGCGACC
AAGGGATGCAGGCGGCCGGGCAGTGCCAGTACAAGTTCGGACATGTGA--------------------------------
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>chr3A_1_TraesCS3A01G213400
CTATTTGATGACATAAGGAGCAGCAAACACGAAAAGCCCTATATCAACACCCAATTTTGTCCTGGCATCTGCCCTACTCA
CGTCGCTAGTTAGCTCACTTCTAAAAGAAACTTGCTACCGCTGGCCCAGCGGAAAAAATATCTCTTGGTTGTTTCATAGA
TTTGAAAAAGTTCACGTGTTTAAAAATTATTCATGGGTATTAAATGTTATTCAAAGTTTAAAAAAATATTCTTGATTCAT
AAAAAATATTCATAAATTTTAAAAGATGTTCATGAATTCAAACCATATTCATGAATTTAAAAATGTATTCATAAAATTTA
AAATTTTCATGGAATTTTAAAATGATCATAAATTTTGAAGACATTAACGAATTTGAATAAACATTTATGAAATTTAAAAG
AACAGAAAAACATTAGAAATAAGGGAAATAGAAAATGAAAGGGAAAACCGGTTGGAAACTCGAATGAATAAAAGAAATGG
AAAATGACCCCAAAAGTCGAACCAAACCAAAACTCGTTAAAACAAAGAAACAGAACTCGCAAAATCGGGAACCTCGGATG
AAAAGCCGTATCACTCTTAAATGGGCCGCGCGCGTTACTACTATTCATGGTTGTAGTTTTTGTATGATTTTGCCTCTACC
TATTCCACGCAACAAGCGTGGAACAGGATTTTTCCCTATTCGTCCGTCGTTGGGCTCCTTTGCAAGTCTGGCCAGTTACG
CCCGCCCCATTGGCGTGCTGTAATAACCATTTTGCAAACGGATCCCTGATTTTCCTCGATTCTTCCACCAACGGCGGTCA
CACTCAAACCATGAGCCGGTGAGCTGCCGCTGCTCCAATCCATGCACGGAAACACCAGCGGCCGCTCAACCACTCGCGCG
CTAGC------------GACCGCATAAACCAACCACCGAAGCAAAACTCGCTCTATCAATCCAATCCATCCCTGCCCCGT
GCTTGCGTTGCGATCTCATCTCGCGACCTACGCACCGCTAGGCGTGGCTGCAATGGAGATCGGCGCGGGCGCTGTCCCGG
GACGTGTCGCCG------CAGCGGTCTTGCTCCTCGTGGGATCGGCGGCGATCGCTGCTGCAGCGGGCGGCGTCGGCGTG
GGCAGGCCCTGCTTCGACGCGTGCTTCGACCAGTGCGTGCCGCGCGAGGAGTTCTGGTTCTGCCAGTTCTCCTGCTACCA
CAGGTGCTCCGGCGGCCGTTCGCCGGCGGCGGTGAAGGCTCGCGACGGCGACAGGGGCGATTGCGAGCACTCGTGCGTGC
TCTCCATGTGCGGCCAGCTCCACCCGGACAGCAAGATGATGGCCGTGTGCCTGGACACGTGCCACAAGAGCTATGCGACC
AAGGGATGCAGGCGGCCGGGCAGTGCCAGTACAAGTTCGGACATGTGATGCTAAATTGCCCGTGCCAAGCAGCCCTAGTA
TTGCTAGTTTGAGTCCGACAAAAACTTTCTAGAATTTATTTACAAGTTGATTCCGCAAAAGGACGGGATCAACCATTAGA
TACAGAATTTGCCAAGTCGCGTGGGCTACGTCTTTCCTCTCACAGAATTTTTTAC-AGATTGTCAATTTTGTATGAGAGG
TTTATTTTGAGCATACCCAATTTGTTAATGCCTACACGGGCACGGGTCTAGTGGCCATAAATCATGAAGGACAGTTCCAA
GTAGGACGATGCCGCAAATATATGGTTATGTACGAGCCGTTCATACTGGAACTGACAGCGTGCTTGGATGCTATCATATG
TGCGATTGGGCGGGGGATTTCCCGTATTATCATTGAGACTGATTGTCAGGCAGTTGTTACGGCGTGGAAACAAGAAAATG
GTCGCTCAGTTGGAGGACAAGTGTGCAAGGACGTGAGGACCTATCTCCATTTCTCCATTACTTTCAGGGTTTTGACCTGA
GATGGACAGGACGAGAAGCAAATGCTGCTGCTCATGGCTGAACACATCTCCACACGAGTGAGGAACTCCAGAACCGTCTA
CGACGCGATAACTTCGGATGCATGGGCGCGTGACCATGCGCCGTCCATCGACCACGCCTCCTTGGAGCAGTTCATGTCCC
TGTGGCCCATGGTGGCGGCCACCCAACTGCAGGAGCACGGCAGTGACGTCGTTCACTTGGGCCTGGAGTAAGGAGGGACA
GTTCTCGACCAGTTCGGCCTACTAGGCCATGTTTTGGGGGCTTCAGGTTTCACCCACGGATGCACTCACTTGGGATTCGC
GGGCACCGCTAAGATGCACGTTCTTTTCCTGGCTGGCCGCTAAGGACAGATGTTGGACCTCGAACCGGTTGGCGCGACGA
GGTTTGCCACACCAGACAGCATGCCCGCTATGCGATCAGCATGAGGAAACAATAAACTATCTACTTCTGTATTGCGTCTT
CACACGGCA
>chr3D_772
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---------------------------------------------------TTCCTCAATTCTTCCAGGAACGGCGGTCA
CGCTCAAACCATGAGCCGGTGAGCTGCCGCCGCTCCAATCCATGCACGGAAACACCAGCGGCCGCCCAACCACTTGCGCG
CTAGC------------GACCGCATAAACCAACCACCGAAGCAAAACTCGCTCTACGAATCCAATCCACCCCTGCCCCGT
GCTTGCGTTGCGATCTCATCTCGCGACCTACGCACCGCTAGGCGTGGCTGCAATGGAGATCGGCACGGGCGCTGTCACGG
GACTTGTCGCCGTCGCCGCAGCGGTCTTGCTCCTCGTGGGATCGGCGGTGATCGCTGCTGCAGCGGGCGGCGTCGGCGTG
GGCAGGCCCTGCTTCGACGCGTGCTTCGACCAGTGCGTGCCGCGCGAGGAGTTCTGGTTCTGCCAGTTCTCCTGCTACCA
CAGGTGCTCCGGCGGCCGTTCGGCGGCGGCGGTGAAGGCTCGCGACGGCGACGGGGGCGATTGCGAGCACTCGTGCGTGC
TCTCCATGTGCGGCCAGCTCCACCCGGACAGCAAGATGATGGCCGTGTGCCTGGACACGTGCCACAAGAGCTATGCGACC
AAGGGATGCAGGCGGCCGGGCA---------CAAGTTCGGACATGTGATGCTGAATTGCCCATGCCAAGCAGCCCAAGTA
TTGCTAGTTTGAGGCCGACAAAAACTTTCTATAGTTTATTTAGAAGTTGATTCCTCAAAAGGACTGTATCAACCATTAGA
TACAGAATTTGCCAAGTCGCGTGGGCTACGTCTTTCCTCTCACAGAATTTATTCAGAGATTGTCAATTTTGTATCAGAGG
TTTATTTTGAGTATACCGAATTTGTTAATGCCT-----------------------------------------------
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>chr3B_772
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---------------------------------------------------TTCCTCGATTCTTCCACGAAGGGCGGTCA
CACTCAAACCATGAGCCGGTGAGCTGCCGCCGCACCAATCCATGCACGGAAACACCAGCGGCCGCCCAACCACTCGCGCG
CTAGCGACCCATCCACTGACCGCATAAACCAACCACCGAAGCAACACTCGCTCTACAAATCCAATCCATCCCTGCCCCGT
GCTTGCGTTGCGATCTTATCTCGCGACCTACGAACCGCTAGGCGTGGCTGCAATGGGGATCGGCACGGGCGCTATCCCGG
GACGTGTCGCCGTCGCCGCAGCAGTCTTGCTCCTCGTGGGATCGGTGGTGATCGCTGCTGCAGCGGGCGGCGTCGGCGTG
GGCAGGCCCTGCTTCGACGCGTGCTTCGACCAGTGCGTGCCGCGCGAGGAGTTCTGGTTCTGCCAGTTCTCTTGCTACCA
CAGGTGCTCCGGCGGCCGTTCGGCGGCGGCGGTGAAGGCTCGCGACGGCGACGGGGGCGATTGCGAGCACTCGTGCGTGC
TCTCCATGTGCGGCCAGCTCCACCCGGACAGCAAGATGATGGCCGTGTGCCTGGACACGTGCCACAAGAGCTATGCGACC
AAGGGATGCAGGCGGCCGGGCAGTGCCAGTATAAGTTCGGACATGTGATGCTGAATTGCCCATGCCAAGCAGCCCAAGTA
TTGCTAGTTTGAGGCCGACAAAAACTTTCTAGATTTTATTTAGAAGTTGATTCCGCGAAAGGACGGGATCAACCAATAGA
TACAGAATTTGCCAAGTCGCGTGGG----GTCTTTCCTCTCACAGAATTTATTCAGAGATTGTCAATTTTGTATCAGAGG
TTTATTTTGAGTATACCGAATTTGTTAATGCCT-----------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S-----------
------------------------------S----------------------------------S--------------
-------------------------------------------------------SS-----------------------
----------------------------------------------------------------S---------------
------------------------------------------------S-------------------------------
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----------------------S-----------------------------S---------------------------
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----------------------------------------------------S--------S-------------S----
-------------S-------------------S--------S-------------------------------------
--------------------------------------------------S--SS-------------------S-----
-----------S-----S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS
>forward_709
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-------------------------------------------------TTGGGCTCCTTTGCAAGTCT-----------
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>reverse_2190
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-----------------------------TGTTTTGGGGGCTTCAGGTT-------------------------------
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