>input_sequence_81698
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-----------------------------------------------------------------------ATGCAACCT
GCCGTCTTCAGAGCCTTGCTCCATTTCATTTATACTGATTCTTTGCCTCATGGCGCCAGGGACCTTGAGGGAGATGAAGA
TATCGAGATGGTCCGGCTTTTACTCGTGGCTGCGGACAGATATGCCATGGACAGACTCAAGATGGTATGCCAAAGCATCC
TTTGCAGGGATCTGAATGCGGACACCGTGGCGACAACATTGGCTTTAGCTGACCAACATAACTGCCACAAGCTTAAGGAT
GCTTGCCTTGAATTTATTGAAAGATCAGATGAC------AATGCTATGGATGGCGTGGTGGCAACCCAAGGCTTCAAAGA
TCTCAAAGTGACTTGCCCATCTCTCATAGTGGACGTACTGGAGAACAGAAGAAAGCTTCGTAAAGCATGA----------
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>chr5A_1_TraesCS5A01G452100
TTAAAAGCGAACAAAACCATCTCTTTATCTCTAACTCCCGACCAAACAATTAACCTGATCACATGATTTATTTTAGTAAG
GTACTATAAAACAACAACAAAGCCTTTAAATAATGAGGCATGCTACGCGTCCGTCAAAAGATCAACCGGGTCATGAGCCA
TCAGATCTGAAGTTATCAAGCGGCCGAGCGGCACCCACCACCATTGCAACAAACTTCTTGTTGCGGAAATCATTGCAACT
GAGATTTTGTTGCAGAAACCTTTGCAACAAAAGTCATGTTGCAGTAACTTTTTGCAACAAAGGTCATGCTGCAGAAACTT
TTTGCAGAAATTTTTCCACATGCACAACGGAGGCGGCTGAAGGCACACATGTGTTTGACGTCTTAGGTTACAGCAAGCTC
AGGGGCATGAGCCACC------A---CAGCTACGTCCGGTCCGGGAATTTCGCCGTGGGCGGCCATGACTGGGCCATCCG
CTTGTACCTGGATGGAAACAGCCAAGGATGCCCAGATTAGACCTCAGTTTATCTTGAGCTTATGAGCGAGAGCACCGATG
TCCGGGCGTCCTGGGAACTGAGGCTAGTCGACAAATGCACCGGATTATCATCTTTAGTGCGTAAAATAGGACCTATGATT
TTCAATTCCGCTGATACCACTAAGTTTGCCCCGCCTGATCCTTATTTCAAAAAGCGAAGCGAGATCGAGGGGTCCGTGTA
CCACAAGGATGATCGCCTCACGATCGAATGCATCGTTACCATTTTTGAAAAGACACAGGTTACCAAACCCA---------
AATCCA---------CGCACAAAATCGACATGCCACCGTCTGACTTGGCCGAACATCTTGGCAGGCTGTTGGATGACAAG
AAGGGGTTCGATGTCAATTTCATTGTTGGGGG-AGAGACCATCAAAGCGCATAGGTTCATTCTTGCTATGCGGTCGCCTG
TTCTAAGAGTTGAGCTCTACGGACCGATGAGGGAGGCGAG---GCTGGGGCAGTGCATTACCATCGAGGACATGCAACCT
GCCGTCTTCAGAGCCTTGCTCCATTTCATTTATACTGATTCTTTGCCTCATGGCGCCAGGGACCTTGAGGGAGATGAAGA
TATCGAGATGGTCCGGCTTTTACTCGTGGCTGCGGACAGATATGCCATGGACAGACTCAAGATGGTATGCCAAAGCATCC
TTTGCAGGGATCTGAATGCGGACACCGTGGCGACAACATTGGCTTTAGCTGACCAACATAACTGCCACAAGCTTAAGGAT
GCTTGCCTTGAATTTATTGAAAGATCAGATGAC------AATGCTATGGATGGCGTGGTGGCAACCCAAGGCTTCAAAGA
TCTCAAAGTGACTTGCCCATCTCTCATAGTGGACGTACTGGAGAACAGAAGAAAGCTTCGTAAAGCATGAGCAATTGCAT
TGGTACATTTACCAAATTATATGAAGCA-TTTAT--------TTTGATAAATTTCTCATACCCATTTGCCGTAGGGATTG
T--GCTTAGTGCTA---------AATGGACC--TAAGGATAGCTATATCAAATCTCAAGTGAT-TGAATGATGTGAAAGT
TCTCCTACATA--CCCAGAATTTTTATTTA------GTAGGTTGTTGATTTTATCTCGAGCGCTACCCTGCAACCGCGTA
ACACTTGCTCTTAATTT-CTAGCAAAGTTTCCTTCTTGTGTGT----------GCAATCTTCATTGAGCATTTGATACCC
ATATGGTCGACATTAGCAATCAATTCTATGATGGCCTTTCTTCATGTATGAGAATGATTT-AAGATTATTAAACACACTA
AAAATTCTATCCTCAAGGTATAACATTATAAATATGAATTTTTTTACGCAAACAGCCCCAAATGGCTAGATCTCAATAAT
ATAATTACATACTTTGATGCCTTGAAGTAGGATAGAATGACCGCGTGCTAAG-----CAAGACGAGAAGGTGTTGGGTGG
TGCCGGCCGCTAGACTACAAGGGTCACAACTGGCTCTTGCATTGAGGCGAGGATCGATGATATTGGAAGTTGATGTGTGC
TTTTCCTCGCCACTCTTCGTTTGTGGGGCTCCTTTTTCTGTTGGTGTCAATTT-TTAGAGATGTCGGGGTTATCATGTGG
AA-AGTAGAATGCCGCCGGTGCAACAGACCCCTCTCTTCAATGTGCAAGTAGTATCTTAGCCCTCCCACACACCCACAAC
GGCAACAAAAATTGACAGAGACAAGCTCTGCCCCCGTCACTCACGCGTTGGTTGCAGAGACAACTAACCATGCCCCAATA
ACACACATCATACCATTGCCGACACAT-----------------------------------------------------
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---------------------------------------------------AAGGCGTAAAGAGCCACACTCACGCCACA
CATACCTACAAGTAGGCCCAAGATCCTACATAACCGAATCGACCACTTACATCTGGGCCCCAAGCAGTGGCCCGAGCACT
AATGCACCACAAGGCTCCCATTGG
>chr5A_332
TTGTCG--------------------------------------------------------------------------
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-----------------ACGTGCTCACCGGAGGCGGCTGAAGGCACGCATGTGTTCGACATCTTGGGTTACAGCAAGCAC
ATGGGCATGGGGCAAGACCCCGG---TAGCTACATACAATCAGGGGTTTTCGCTGTCGGCGGCCACAACTGGGCGATCCG
CTTCTATCCTGATGGGTATAAAAGCGAGAATCGAGATTACATCACAATTTTTCTCCAGCTTATGAGCAAGAGCACTAAAG
TCCGGGCCTCTTGTGACCTAAGGCTGGTCGACCAGTGCACCGGATTACGGTCTTCCGTGATCAAAACAGGGCCTAGGATT
TTCAATTCCGACGATTCCAGTCGGTTTGCTCCGGGGACTGCTCAGTTCAAAAAGCGAAGCGAGATCGAGGGATCCGCATA
CCTTAAGGATGATCGCCTGATGATTGAATGTATTGTCACTGTTTTCGAGAAGCCACGTGTTACCAAAACCACCGAAGCCA
AATCGC---------CACCCAAAATAGACAGACCACCATCTGACATGGCTAAGCATGTTGGCAAGCTGCTGGAAGAAAAG
GAGGGATTGGATGTCAGTTTCATTGTTGGAGG-AGAGACCATTGAAGCGCATAGGCTCGTTCTCGCTATGCGGTCGCCTG
TTCTTAAAGCGGAGCTCTACGGGCCAATGAGGGAGGCGAG---GGCGGGGCAGTGCATTACCGTCAAGGATATGCAGCCA
TCCATCTTCAGGGCCCTGCTCCATTTCATCTATACCGATTCTTTGCCT---GGCCATGAGGACTTCGAGGGAGAAGAGAA
TATTGAGATAATCCGGCTATTACTGGTGGCTGCGGACAGATATGCCATGGAGAGGCTCAAGATGGTTTGCCAAAGCATCC
TTTGTGAGGATCTGAGTGTGGACACCGTGGCAACCACATTGGCTTTAGCTGACCAATATAACTGTGATAAGCTTAAGGAC
GCTTGCCTTGAATTTATCAAAATATCAGATGAT------AACGCTATGGACGCCGTGGTGGCAACCCAAGGCTTCAAAGA
TCTCAAAATGACTTGCCCATCTCTCATAGTGGATGCACTGGAGAATAGAAGAAAGCTTCGTAAAGCATGAGCAGCTACAT
TGGTAGATTTGTTAAATCATATGAACTG-TTTGTGATTAGTATTTATTACATTTCT------------------------
---ACTCAATGTTAGATGGAT--GATGGATC--TAAGAATAGTTAGGTTAATTCTCAAGTGATGTGAATGGTGTGAATGT
TCTCCTAAATCATCCCAGAATATTTATTTA------TCAGGTTC---ATTTTATCCAGAACGCTTGTCTGCAACCGTGTA
ACACTTGGTCTTAATCTTCTGTCAAAATTTCCT---------T----------GCAACCTTTGTTGAACATTTGATACCC
AGATGGCTTACATGCGCAAGCAATGCTACGATGGTC-----TCATCTATAAGAATGAAAACAAGATTAAACATGC-C---
AAAATGCTGTTCTCGGGATATAG-ATTATAAATAGGTAAGTTTTTT----------------------------------
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>chr5B_332
TTGTCT--------------------------------------------------------------------------
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-----------------ACGTGCTCACCGGAGGCGGCTGAAGGCACCCATGTGTTCAACATCTTGGGTTACAGCAAGCAC
AGGGGCATGGGGCAAGACCCCGG---TAGCTACATACAATCAGGGGTTTTCGCAGTCGGCGGCCACGACTGGGCGATCCG
CTTCTATCCTGATGGGTATAAAAGAGAGAATCAAGATTACATCGCAGTTTTTCTCGAGCTTATGAGCAAGAGCAATAAAG
CCCGCGCCTCTTGTGACCTGAGGCTGGTCGACCAGTGCACTGGGTTACGGTCTTCGGTGATTAAAACAGGGCCTAGGATT
TTCAATTCCGACGATTCTAGTCGGTATGCTCCGGGGACTGCTCAGTTCAAAAAGCGAAGCGAGATCGAGGGATCCGCATA
CCTTAAGGATGATCGCCTGATGATTGAATGCATTGTCACTATTTTCGAGAAACCACGTGTTACCAAAACCACCGAAGCCA
AATCGC---------CGCCCAAAATTGACAAACCACCATCTGACATGGCTAAGCATGTCGGCAAGCTGCTGGAAGAAAAG
GAGGGATTGGATGTCAGTTTCATTGTTGGAGG-TGAGACCATTGAAGCACATAGGCTCATTCTCGCTATGCGGTCGCCTG
TTCTTAAAGCGGAGCTTTACGGGCCAATGAGGGAGGCGAG---GGTGGGACAGTCCATTACCATCAAGGACATGCAGCCT
TCCATCTTCAAGGCCCTGCTCCATTTCATCTATACCGATTCATTGCCT---GGCCGTAGGGACTTAGAGGGAGAAGAGAA
TACTAAGATGATCCGGCTTTTACTGGTGGCTGCGGACAGATATGCCATGGAGAGGCTCAAGATGGTTTGCCAAAGCATCC
TTTGCGAGGATCTGAATGTGAATACCGTGGCAACCACATTGGCTTTAGCTGACCAATATAACTGTGATAAGCTTAAGGAT
GCTTGCCTTGAATTTATCAAAACATCAGATGAT------AATGCTATGGACGCCGTGGTGGCAACCCAAGGCTTCAAAGA
TCTCAAAGTGACTTGCCCATCTCTCATAGTGGACGCACTGGAGAACAGAAGAAAGCTTCGTAAAGCATGAGCAGCTACAT
TGGTAGATTTGCTAAATCATATGAACTG-TTCGTGAGTAGTATTTGTTAAATTTCTTCCACCCACTTGCCGTAGGGATGG
TCAGCTCAATTTTAGATGGATATGATGGATC--TAAGAATAGTTAGGTTAATTCTCAAGTGATGTGAAAGGTGTGAATGT
TCTCCTAAATCATCCCAGAATTTTTATTTATCATTATGAGGTTGTTAATTTTATCTAGAACGCTTCTCTGCAACCGTGTA
ACACTTGGTCTTAATCT-CTGTCAAAATTTCCTT----------------------------------------------
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>chr5D_332
TTGTCG--------------------------------------------------------------------------
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-----------------ACGTGCTCACCGGAGGCGGCTGAAGGCACGCATGTGTTCGACATCTTGGGTTACAGCAAGCAC
ATGGGCATGGGGCAAGACCCCGG---TAGCTACATACAATCAGGGGTTTTCACTGTCGGCGGCCACAACTGGGCGATCCG
CTTCTATCCTGATGGGTATAAAAGCGAGAATCGAGACTACATCGCAGTTTTTCTCGAGCTTATGAGCAAGAGCACTAAAG
TCCGGGCCTCTTGTGACCTGAGGCTGGTCGACCAGTGCACCGGATTACGGTCTTCAGTGATCAAAACAGGGCCTAGGATT
TTCAAGTCCAACGATTCCAGTCGGTATGCTCCAGGGACTGCTCAGTTCAAAAGGCGAAGCGAGATCGAGGGATCCGCATA
CCTTAAGGATGATCGCCTGATGATTGAATGCATTGTTACTGTTTTCAAGAAGCCACGTGTTACCAAAACCACCGTAGCCA
AATCGC---------CGCCCAAAATTGACAGGCCACCATCTGACATGGCTCAGCATGTTGGCATGCTGCTGGAAGAAAAG
GAGGGATTGGATGTCAGTTTCATTGTTGGAGG-GGAGACCATTGAAGCGCATAGGCTCGTTCTCGCTATGCGGTCGCCTG
TTCTTAAGGCGGAGCTCTACGGTCCAATGAGGGAGGCGAG---GCCGGGGCAGTGCATTACCGTCAAGGATATGCAGCCA
TCCATCTTCAGGGCCCTGCTCCATTTCATCTATACCGATTCTTTGCCT---GGCCGTGGGGACTTCAAGGGAGAAGAGAA
TATTGAGATGATCCGGCTTTTACTGGTGGCTGCGGACAGATATGCCATGGAGAGGCTCAAGATGGTTTGCCAAAGCATCC
TTTGCGAGCATCTGAATGTGGACACCGTGTCAACCACATTGGCTTTAGCTGACCAATATAACTGTGATAAGCTTAAGGAT
GCTTGCCTTGAATTTATCAAAATATCAGATGAT------AACACTATGGACGCCATAGTGGCAACCCAAGGCTTCAAAGA
TCTCAAAGTGACTTGCCCATCTCTCATAGTGGACGCACTAGAGAACAGAAGAAAACTTCGTAAAGCATGAGCAGCTACAT
TGGTAGATTTGTTAAATCATATGAACTCTTTCGTGAGTAGTATTTGTTAAATTTCTCCTACCCACTTGCCGCAGGGATGG
TCAGCTCAATTTTAGATGG--ATGATGGATCTATAAGAATAGCTAGTTTAATTATCAGGTAATGTGAATGGTGTGAATGT
TCTCCTAAATCATCCCAGAATTTTTATTTG------TCAGGTTGTTAATTTAATCTAGAACACTTCTCTGCAACCGTGTA
ACACTTGGTCTTAATCTTCTGTCAAAATTTCCT---------T-------------------------------------
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>chr5B_335
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--------------TCCACATGCACGACGGAGGCGTCTGAAGGCACACATGTGTTCGACGTCTTGGGTTACAACAAGCTC
AGGGGCATGGGCCACC------A---CAGCTACGTCGGGTCCGGGAATTTCGCTGTGGGCGGGCACGACTGGGCCATCCG
CTTGTACCCGGATGGAAACGGCGAAGGATGCCCAGATTACATCTCAGTTTATCTTGAGCTTATGAGCAAGAGCACCGAAG
TTCCGGCGTCCTGTGAACTGAGGCTAGTCGACAAGTGCACCGGATTATCGTCTTTAGTGCGTAAAATAGGACCTAGGAAT
TTCAATTCCGCTGATACCACTAAGTTTGCCC-GCCTGATCCTTATTTCGAAAAGCGAAGCGAGATCAAGGGGTCCGCGTA
CCACAAGGATGATCGCCTCACGATCGAATGCATCGTCACTGTTTTTGAAAAGCCACATGTTACCAAA---------CCCA
AATCTC---------CGCCCAAAATCGACATGCCACCGTCTGACTTGGCTGAACATGTTGGCAGGCTGCTGGATG---AG
GAGGGATTCGATGTCAGTTTCATTGTTGGGGAGAGAGACCATCGAAGCGCATAGGTTTGTTCTTGCTATGCGGTCGCCTG
TTCTAAGAGTAGAGCTCTACGGACCGATGAGGGAGGCGAG---GCTGGGGCAATGCATTACCATCGAGGACATGCAGCCT
GCCGTCTTCAGAGCCTTGCTCCATTTCATTTATACTGATTCTTTGCCTCGTGGCGGCGGGGACCTTGAGGGAGATGAGAA
TATCGAGATGGTCCAACTTTTACTAGTGGCTGCGG-CAGATATGCCATGGACATGCTTAAGATGGTTTGCCAAAGCATCC
TTTACGAGGATCTGAATGCGGACACCGTGGCGACCACATTGGCTTTAGCTGACCAACATAACTGCCACAAACTTAAAGAT
GCTTGCCTTGAATTTATTGAAAGATCAGATGAC------AATGCTATGGATGCCGTGGTGGCAACCCAAGGCTTCAAAGA
TCTCAAAGTGACTTGCCCATCTCTCATACTGGACGCATTGGAGAACAGAAGAAAGCTTCGTAAAGCATGAGCAATTGCAT
TGATAGATTTACCAAATTATATGAACCA-CTTAT--------TTTGATAAATTTCTCATACCCATTTGCCGTAGGGATTG
TCAGCTTAGTGCTA---------AATGGACC--TAAGCATAGTTATATTAATTCTCAAGTGAT-TGAATGATGTGAAAGT
TCTCCTATATA--CCCAGAATTTTTATTTA------GTACATCGTTGATTTTATCTCGAGCGCC----------------
------------AATTT-CTAGCAAAGCTTCCTTCTTGTGTGT----------GCAATCTTCGTTGGGCATTTGATACCC
ATACGGTCAACATTAGCAATCAATTCTATGATGGCCTTTCCTCATGCATGAGAATAATTT-AAGATTAAACACACAC---
AAAATTCTATCCTCAAGGTATAACATTATAAATATGA--TTTTTTACGCAAACAGCCCTGAATGGCTAGATCTCAATGAT
ATAATTACATACTTTGATGCCTTGAAGTAGGATAGAATGATCGCGTGCTAAATTAGACAAGACGAGAAGGTGTTGGGTGG
TGCCGGCCGATAGACTACAAGGGTCACAACTGCCTCTTGTATCGAGGCGAATATCAATGATATTAGAAGTTGACGTGTGC
TTTGCCTCACCACTCTTTGTTTGTG-------------------------------------------------------
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>chr5A_348
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---------------------------CGGATGAGGCTCAAGGCATGCATGTGTTTCATATCTTGGGCTACAGCAAGCAC
AGGGGCATGGGCAAAGACCCCGA---TAGCTTCATAATATCCAGGATTTTCACTGTTGTCGGCCACGACTGGGCCATCCG
CCTCTACCCTGACGGATACAGCATAGCATATCTAGATTACATCTCAGTTTATCTCGAGCTTATGAGTAACAACACTAAAG
TCCGGGCATCTTGCGACCTGAGGCTTGTTGACCAATTTACCGGGTTATCGTATTCAGCGCAAAAAACAGGGCCTAGGATT
TTCAATTTCGACGATTCCACTGGGTTTGCTCCAGAGTTCTGTGAGTTCAAAAGACGAAGCCATATCGAGGGATCCGCATA
CCTTAGGGATGATCACCTGACGATAGAATGCATCATCACTGTTATAAAAAAGCCACATGTTGCCGAT---------ACCA
AACCAT---------TCCCCAAGATTGACATGCCACCATCTGACATGACTGCGCATGTTGGCAGGCTGCTGGAAGAAAAG
GAGGGATTTGATGTTAGTTTCATTGTTGGGGA-AGAAACCATTGAAGCGCATAGGTTCGTTCTTGCTATGCGGTCACCTG
TTCTGAAAGCAGAGCTCTACGGGTTGACGAGGGAGGCGAGGCCGCCGGGGCAGTCCATAACCATCAAGGACATGCAACCT
GCCGTTTTCAAGGCCCTGCTTCATTTCATCTATACTGACTCTTTGCCG---GGAGACATGGATCTTGAGGGAGGTAAGGA
TACTGACATGGTCCGGCTTCTGCTAGTGGCTGCAGATAGATATGCCATGGAGAGGCTCAAGCTGGTTTGCCAAAGCATCC
TTTGTGAGGATCTGAACGCGGTCACCGTGGCAACCACATTGGCTTTAGCTGACCAACATAACTGCCACAAGCTTAAGGAT
GCTTGCCTTGAATTTATGGAAATGTCAGATGAC------A------TGGATGCTGTGGTGGCAACCCAAGGCTTCAAGGA
TGTCAAGGCAAGTTGCCCATCTCTCATAGTGGACGCATTGGAGAAGAGAAGAAAGTTTCGTAAAGCATGAGCAGCTACAT
AGGTAGAATTGCCAAATCATATAAACTG-CTTGTCAATA---TTTGATAAATTTCTTGTACTCACTTGCCATTGTGATGG
TAAGCTCAATGCTA---------GATGGATC--TAAGAATATTTAGGTTGATTTTCAAGTGATATGGATGATATGAATAT
TCTCGTCGATGAACCCAGATTTGTAT-------TCATCATATTGTTGATTTCATCTGGAGCGCTCCCTTGCAATCGTGTA
ACAGTTGGTCTTAATTTTCTGGCAAAATTTCCTCCATT----------TGTGTGCAACCTTTGTTGCGCATTTGACACCC
ATATG---------------------------------------------------------------------------
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>chr5B_348
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---------------------------CGGACGAGGCTCAAGGAATGCATGCGTTCCATGTCTTGGGCTACAGCAAGCAC
AGGGGCATGGGCAAAGACCCCGA---TAGCTTCATAAGATCCAGGATTTTCACTGTCGGCGGCCACGACTGGGCCATCCG
CCTCTACCCTGACGGATACGGTAAAGCATGCCCAGATTACATCTCAGTTTATCTCGAGCTTATGAGTAACAGCACTAAAG
TCCGAGCGTCCTGCGACCTGAGGCTAGTCGACCAGTGCACCGGGTCATCATCTTCAGTGCATAAAACGGGACCCAGGATT
TTCAGTTCTAGTGATACTACTAAGTTTGCCCCACCACATACTTCTTTCAAAAAGCGAAGCGAGATCGAGGGATCAGCATA
CCTTAGGGATGATCGCCTCACGATAGAATGCATCGTCACTGTTATGAAAAAGCCACATGTTGTCGAT---------ACCA
AACCAT---------TCCCCAAGATCGACATGCCGCCATCTGACATGACTGCGGATGTTGGCAGGCTGCTGGAAGAAAAG
GAGGGATTTGATGTCAGTTTCATTGTTGGGGA-AGAGACCATTGAAGTGCATAGGTTCGTTCTCGCTATGCGGTCACCTG
TTCTAAAAGCAGAGCTCTACGGGCCGATGAGGGAGGCGAG---GCCGGGGCAGTCCATAACCATCAAGGACATGCAACCT
GTCGTTTTCAAGGCCCTGCTTCATTTCATCTATACTGACTCTTTGCCG---GGAGACATGGATCTTGAGGGAGGTAAGGA
TACTGACATGGTCCGGCTTTTGCTAGTGGCTGCAGATAGATATGCCATGGAGAGGCTCAAGCTGGTTTGCCAAAGCATCC
TTTGTCACGATTTGAACGCGGACACCGTGGCAACCACATTGGCTTTAGCTGACCAACATAACTGCCACAAGCTTAAGGAT
GCTTGCCTTGAATTTATGAAAATGTCAGATGAC------A------TGGATGTTGTGGTTGCAACCCAAGGCTTCAAGGA
TGTCAAGGCGACTTGCCCATCTCTCATTGTGGACGCATTGGAGAAGAGAAGAAAGTTTCGTAAAGCATGAACAGCTACAA
AGGTAGAATTGCCAAATCATATAAACTG-CTTGTGAGTA---TTTGATAAATTTCTCGTA--CACTTGCTGTAGGGATGG
TAAGCTCAATGTCTGATGG--AT-------C--TAAGAATAGTTAGGTTAGTTCTCAAGCGATATGGATGATGTGAAAGT
TCTCGTAGATCAACCCAGATTTGTAT-------TAATTATGCTGCTG-TTTTATCTGGAGCGCTTCCCTGCAATCGTCTA
ACACTTGGTCTTAATCTTCTGGCAAAATTTCCT---------TTCTTGTGTGTGCAACTTTTGTTGCGCATTTGTCATCC
ATATGGTCTACATTAGCGAGCAATGCTACGATGACCT-------------------------------------------
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>chr5D_348
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---------------------------CGGACGAGGCTCAAGGCATGCATGTGTTCGATATCTTGGGCTACAGCAAGCAC
ATGGGCATGGGCAAAGACCCCGA---TAGCTTCATAAGATCCAGGATTTTCACTGTCGGCGGCCACGACTGGGCCATCCG
CTTCTACCCTGATGGATACGGTAAAGCATGCCCAGATTACATCTCAGTTTATCTCGAGCTTATGAGTAACAGCACTAAAG
TCCGGGCATCCTGCGACCTGAGGCTAGTCGACCACTGCACCGGGTCATCATCTTCAGTGCATAAAACGGGACCCAGGATT
TTCAATTCCGGTGATGCTACTAAGTTTGCTCCACCTCATTCTTCTTTCAAAAAGCGAAACGAGATCGAGGGATCAACTTA
CCTCAGGGATGATCGCCTGACGATAGAATGCATGGTCACTGTTATAAAAAAGCCACATGTTGCCGATACCA---------
AGCCAT---------TGCCCAAGATCGACATGCCACCATCTGACATGACTGCACATGTTGGCAGGCTGCTGGAAGAAAAG
GAGGGATTTGATGTTAGTTTCATTGTTGGGGA-AGAGACCATTGACGCGCATAGGTTCGTTCTCGCTATGCGGTCGCCTG
TTCTGAAAGCAGAGCTCTACGGGCCGATGAGGGAGGCGAG---GCCTGGGCAGTGCATAACCATCAAGGACATGCAACCT
GCCGTTTTCAAGGCCCTGCTCCATTTCATCTATACCGACTCTTTGCCG---GGAGACATGGATCTTGAGGGAGATGAGGA
TACTGACATGGTCCGGCTTTTGCTAGTGGCTGCAGATAGATATGCCATGGAGAGGCTCAAGCTGGTTTGCCAAAGCATCC
TTTGTGACGATCTGAATGCAGACACCGTGGCAACCACACTGGCTTTAGCTGACCAACATAACTGCCACAAGCTTAAGGAT
GCTTGCCTTGAATTTATGGAAATGTCAGATGAC------A------TGGATGCTGTGGTGGCAACCCAAGGCTTCAAGGA
TGTCAAGGCGACTTGCCCATCTCTCATAGTGGACGCATTGGAGAAGAGAAGAAAGTTTCGTAAAGCATGAGCAGCTACAT
AGGTAGAATTGCCAAATCATATAAACTG-CTTGTCGGTA---TTTGATAAATTTCTTGTACCCACTTGCCGTAGTGATGG
TAAACTCAATGCTAGATGG--AT-------C--TCTGAATAGTTAGGTTGATTTTCAAGTCATATGGATGATATGAATGT
TCTCGTAGATGAACCCAGATTTGTAT-------TCATCATATTGCTGATTTTATCTGGAGCGCTTCCCTGCAATCGTGTA
ACATTTTGTCTTAATCTTCTGGCAAAATTTCCTCCGTT----------TGTGTGCAGCCTTTCTTGCACATTTGACACCC
ATATG---------------------------------------------------------------------------
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>chr5A_352
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-------------------------------GGCGGCTGTAGGCACACATGTGTTTGACATCCTGGGTTACAGCAAGCAT
AGAGGTATGAGCCACGACGGCGGCAGCAGCTACATACGGTCGGGGACTTTCGCTGTCGGCGGCCACAGCTGGGCCATCCG
CTTCTACCCTGACGGGTTTAAGAAAGAAAATCAAGACTACA------------TCTAGCTTATGAGCAAGAACACTAAAG
TCCGGGTGTCTTGCGACCTGAGGCTGGTCGACCAGTGCACAGGATTACGGTATTCAGTGAGCAAAACAGGGCCTAGGATT
TTCAATTCCGAAGATTCCACTCGGTATGCTCTGCAGACTGCTCATTTCAAAAGGCGAAGCCAGATCGAGGGATCCGCATA
CCTTAGGGATGATCGCCTGATGATTGAATGCACTGTCACTGTTTTCGAGAAGCCACGTGTTACCAAAACTATTGGAACCA
AATCGC---------TGCCCAAAATCGACAGGCCACCATCTGACATGGCTCAGCATGTTGGCAAGCTACTGGAAGAAAAG
GAGGGATTGAATGTCAGTTTCATTGTTGGAGG-AGAGACCATTGAAGCGCATAGGCTCATTCTCGCTATGCGGTCGCCTG
TTCTTAAGGCGGAGCTCTACGGGCCAATGAGGGAGGCGAG---GCTGGGGCAGTGCATTACCATCAAGGACATGCAGCCT
GCCGTTTTCAAGGCCCTGCTCCATTTCATCTACACCGATTCTTTGCCT---GGCAGTGAGGACTTCAAGGGAGAAGACAA
TACTGAGATGATCCGGCTTTTACTGGTCGCTGCGGACAGATATGCCATGGAGAGGCTCAAGATGATTTGCCAAAGCATCC
TTCGTGAGGATCTGAATGTGGACACCGTGGCAACCACATTGGCTTTAGCTGACCAATATAACTGTGACAAGCTTAAGGAT
GCTTGCCTTGAATTTATCAAAATATCAGATGAC------AATGCTATGGACGCCATGGTGGCAACGCAAGGCTTCAGTTA
TCTCAAAGTGACTTGCCCATCTCTCATAGTGGACGCACTGGAGAACAGAAGAAAGCTTCGTAAAGCCTGAGCAGCTACAT
TGGTAGATTTGCTAAATCATATGAACTG-TTCGTGAGTAGTATTTGTTAAATTTCTTCCACCCACTTGCCGTAGGGATGG
TCAGCTCAATTTTAGATGATGAT----------------------GGTTAATTCTCAAG---------TGATGTGAATGT
TCTCCTAAATCATCCCAGAATTTTTATTTATCATTATCAGGTTGTTACTTTAATCTAGAACGCTTCTCTGCGACCGTGTA
ACACTTGGTCTTAATCTTCTGTCAAAATTTCCT---------T-------------------------------------
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>chr5D_353
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--------------------------------GCGGCTCAAGGGACACATGTGTTTGATATCATGGGTTACAGCAAGCAC
AGGGGCATGGGCAATGACGAAGA---CAGCCACATACTGTCTGGAATTTTCGCTGTAGGCGGGTACGACTGGGCCATCCG
CTTCTATCCCGATGGGCACGGCAGTGCATGCCCTGATCACGTCACAGTTTTTCTCGAGCTTTTGAGCGATAGCGCAAAAG
TCCGGGCGTCCTGCGACCTGAGGCTGGTCGACCAGTGCACCGGATTATCGTCTTCAGTGCATAAAACAGGGCCTAGGATT
TTCAACTCCGATGATGTCACTAAGTTTGCTCCACAATTTGCTAATTTCAAAAGGCGAAGCGAGATCGAGGAATCCGCATA
CCTTCGGGATGATCGCCTGACGATCGAATGTATCATCATTGTTTTCAAGAAGCCGCATGTTACCCAAGCCA---------
ATTCGCTCCCCAAAATCCCCAAAATCGACATGCCACCATCTGACATGACCGAGAATGTTGGCAGGCTGCTGGAAGAAAGG
GAGGGATTTGATGTCCGTTTCATTGTTGGAGG-AGAGACCATTGAAGCGCATAGGCTCGTTCTCGCTATGTGGTCGCCTG
TTCTTAAGGCGGAGCTCTAGGGGCCAATGAGGGAGGCGAG---GCCGGGGCAGTGCATTACCATCAAGGACATGCAACCT
GCCGTCTTCAGGGCCCTGCTCCATTTCATCTACACCGATTCTTTGCCT---GGCGGTGAGGACCGTGAGGGAGACGATGA
TACTGAAATGGTCCGGCTTCTACTAGTGGCCGCGGACAGATATGCCATGGAGAGGCTCAAAATGGTTTGCCAAAGCATTC
TTTGCGAGGATCTGCATGCGGAAACTGTGTCAACCACATTGGCTTTAGCTGACCAACATAATTGCGTCAAGCTTAAGGAT
GCTTGCCTTGAATTTATCAAAATATCAGATGACAATGTGA------TGGATGCCGTGGTGGCAACCCAAGGCTTCAAGGA
TCTCAATGTGACTTGCCCATCTCTCATAGTGGAAGCATTGGAGAAGAGAAGGAAGTTTCGTAAGGCATGAGCAGCTACAT
TAGTAGATTT----------------------------------------------------------------------
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>chr5B_2009
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-------------TCTTTGTTTGTGGGGCTCCTTTTTCTGTTGGTGTCAATTTTTTAGAGATGTTGGCATTATCGTGCGG
AAGAGTGGAATGCCGTCGGTGCAACAGACCTCTCCCTTCAGTGTGCAAGTAGTATTGTAGGCCTCCCACACACCCACAAC
GACAACAAAAATTGATAGAGAAAAGAT----CCCCGTCATGCACGCATTGGTTGCAGAGGCAACTAACCATGCCCCAATA
ACACACACCATACTATTGCCGACACATCTCTACTCCTAATGTCTCAGTTGGTAGGTCGCGTTCCGGGTTTTATTTTCGTC
CCACCTCACCCGGTCTTTTTTGGTACTTCTTTGGTACTTCCTCCCACCTCCCACCCGTTTTATTTTGCTGGTTTTTTTCG
TCCCTCCCCCACCCCACCGGTTTAGTTTCGCGTCACCCTCTCACACAACGAAAAAAATCTTAACGGATCATAACTTTCCA
TGCTGGTGCAAGTTATTTTTAGTAATGTCTTTATGTGAAAGAATCAATCACGATCAATCTCTAAATATCAAATCTAAATT
AATTAACCTTACCTTAAATTGCTCAATCACATTAATTAGGAAACAAAATAACCGATTTTAAGAAAATATCTACTCTTAAT
GGAGGGTATTACATACCAAACATAGGTATGTCATTAGCTCGCTTCCTTCCCTTCTCTTCCCTTCGTCCCTCAGTCCCATG
CTCGTGGCGCTGAAGTGGCATCGACGCGCGATGGCGGCGAGGACAACACGTGGCAGCCCCTGAAGCACGAACACGACTGC
ACCTCGGGTCTGTCGTCTCCCAAGATATGGGTGAGTTCTCGTGATGCCCACCCTAAACCCTCACGTCCTACAAATTCCTC
AACCTCTACCATCTCGATTTCGTCCATGCTCTGATCGAAATGACGATGCAGCTCCGGCCGATTGACAATGGAGGTTTGCC
ATCCTTCCTGTCAGCACCCACTCTTGGAGGAACGACACGCCATGCCGATCGAACCCGGTCGAGATCACTCACCAAGATTG
CTATTCGGAAGTTTTTTGTCAAAAAGTGAAGAGTGGAACGGGATCTGCACTTTTGTTAATATCTCTACTCCTAATGTCTC
AGTTGGTAGGTCGCGTTCCGGGTTTTATTTTCATCCCACCTCACCCGGTCTTTTTTGGTACTTCTTTGGTACTTGCTCCC
ACCTCCCGCTCAGCCGAGATGGTTTATTTTCGTACTCCCTCCCACCTCCCAGGTAGTTCCCTCCATGCAAAAAAAATCGA
ACCAACCAATCTCTACTCCTAATGGAGCAGTTGGTAGTCTTCGTCGGTCAATTTTCGTCCCACCACTTTCGTCCGGTTTT
TTCGTAGGTTAACCGTCGTAGATTTTTTTCGTCGCCTCCCCCACTTCATCGGTTTATTTTCACTTCACCCTCTCACACAA
CGAAAAAAACTGAATGGATGAGAACTTTCCATACTGACGCAAATTATTTAGTAATGTCTTTATGTAAAAGAATCAATCAC
AATCAATCTCTAAAGATCAAATCTAAATTAATTAATCTTCATAATGTTTGTTTCCTTTCGAATCACGTCCATAACTTTCC
TTCCTTGTTTGGGCAGAAACTGTTTGGTAGCAGAGATTAGGAAGCTTCCTATGAGTGTAATAATAGGAAGTATTCTTTTT
CTTGATGATTCGTTTCCATGCATGATGATAGTAATATATGCCAACATTCACCACTATTTATCAACATCATCAATCGTATC
CATTTCTACCAGTTTTAAGGGAATCTGCTCGCTATGTCTTTTTTAAGGGGATCCGCTCGCTAAGTCGTCGTCGCATGTTA
TTTTCACAAACAATCTCTACTCCTAATGGAGCAGTTGGTAGCTTCGTACGGTTTCTTTTTGTCCTCCTCCCACCTCCCCT
GGTTTTTTTCATCCTCCCTCCCACCTCCCAATTTCGTTGGTTTTTTTCGTCGGTTTTTACTCGCCTCCTCCCACCTCCCA
ATTTCGTCCGGTTTTTATTTGTCCCACCTCCCACCACCCCCTCATACTGGTTCTTCTTCTCTCCACTCTTTCCTTGCAAA
CCAATAATTTCCTAACATACAAAAGATCACGAATCTATCTTTCCTTACCCGAACCAATCGCGCCCTACATCAGTGCATTT
CTTTATTAAGAAAACTAACACGTAAATCTTAACGCATTGCAAACAAATACCGTTATGGACCTAATTAATTTATTATGGAA
TCTATACGTGGTCGCATTGGTTCTTTTTCTCTCCACTCTTTCCTTGCAAACCACTAATTTCCTAACATACAAAAGATCAT
GAATCTATCTTTCCTTACCCGAATCAATCGATCCCTACATCAGTGCATTTCTTTATTAAGAAAACTAACACGTAAATCTT
AACGCATTGTAAAGAAATCCCGTTATGGACCTAATTAATTTATTATGGAATCTGTACGTGGTCGCATCTCTCCCCTCGTG
AAAAAATCGCATCCATCTCCCGCTAAAAAGGAAAAGAGAACATGAACGATCAATCCCACACCCTGCATCTCAGTAGCAAA
AAATCGCCCCCGCCTCTGCTACTGCGCCTCGCCGTGTGCCCGGCTCGACCCATGCCTCGCCTGCATGGCTGGACGCCGCC
GTCTCCACCGCCACGTACAAGAAAACGGTGGGCAGAACCATCCATTCAAATCGCACACCCCCACCCTCCTCCGCAATCCC
TAGCCCCGCATCACCCTATCGCTTTCTCGCCTCTCTTTCCCCTCGATGTAGATGGTGCCGAGCGGCGGCCTCGAGCACTG
GAAGTGTCGCCCTCTCTATCTTCGCTGCGTCGAGAGATGGGCCGAGGCTATCGTCGGTTCGCCGCCCACGATTGGGCCGC
CTCCGGTTGTCGCGCACCACCGGCTCCACCTAACGTGCCCGACCCTCTCCGCTTTCGACCTTCCGGTGACCACATCCCTC
CACGCCTCCATCCATCATCCACAAGGCCACTCCCTGCACCCACCCTCCTAAATTCTCCATACCGGCGGACAATCACCGAA
GATCCAAGTTGGCCCGATATCAATTTTCTTACAAGCTTTCTTTATCAGTTGGTGATGGGAATGGGTTCCAATTTCTCTCT
CTGACTGTGGATTCGCAGGCAAGAAGCGCTTCTACATGCATCCTCCGGTCGGTCCCTAAAGTACCAAGGTAAATGGTTGA
TGTTGCGTTTGTCTAGGATGATATATGTTGGCTCTTTTCCGGTTCATCCGAGCAGTTTGGTGACTAATTTACTGATAATT
TAATTATATTAATGAAATGAGGTGGGTGTATTGTCGTGCATTTATCTTGCCAGTAATGTTCTGTGATGCTCTGATGCACT
TTGGGAATTGGTTATCTTGTCTTCAGTGCAGAACATTTGTTTATTAATGCATGAGAAGAATCCTTGTTACTACCTTGAAC
CTGTTTTATAATCCATATTGTTATGCACTAGCGCGTGTGCGTGTGAAATAGATGGATTATGGTACCGTACCCAATAAGAT
GGATATGTGTGTGTGTTAGAGAGAGAGAGAGGGAGAGGGGGAGAGAGAGTGAGGAGGAGGGAGGGAGAGAGTGTGTGTGA
GAATTTGATGGTAAAAAGGTCGTCAATGTCACTTGATATGTATGAGAATATTAAATGTAATATTAACATAATTGATATTG
AACTCTTAAAGTTAATGTGGCCCCGTTGCAACGCACGAGTGTTCTTCTAGTAAGGCGTAAAGAGCCACACTCACGCCACA
CATACCTACAAGTGGGCCCAAGACCCTACATAATCGAATCGACCACTTAGATCCGGGCCCCAAGCAGTAGCCCCAGCCCC
AATGCACCACAAGGGTCCCATT--
>SNPs
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS--------------------------------------------------S---------------
-----------------------------------------------------S-----------S--------------
--------S-------------S----------------S-S------------------------------------S-
-------------S-------------------------------------------------------------S----
----------------------------------------------------------------------------S---
---------------------------------------S------------S----S---------S------------
----SS------------S-------------------------------------S-----------S-------S---
S----S----------S--------------------------S------------------------------------
----------S---------------------------------------------------------------------
-------------------------------------------------S-----S---------------------S--
------------------------S-----------------------------S-----------S-------------
-----SS---------------------------S---------------------------------------------
----------------------------------------------------S---------------------------
-----------------------------------S--------------------------------------------
-----S-------------------S------------------------------------------------------
-------------------------------------S----------S--S----------------------------
-------S--------------------------------------------------------S-----------S---
-------S------------------------------------------------------S-----------------
--------S-------------------------------S---------------------------SSS-SSSSSSSS
--------------------------------------S-------------------SS-----------------S--
----------------------------------------S----------S----------------------------
---------S----------------------S------S--S-------SS---S--------S--------S------
---S----S--------S----------------------------------------------S--SS-----S--S--
------S--------S--------------S---S-----S--------------SS---S-------------------
-S-------------S-----S---S-SSSS--------SS-----S------------S--------------------
-------S-----S------------------------------------------------------------------
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-------------S---------S---------S---------------S---S--------------S----S---S-S
--------------S-------SS
>forward_312
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----------------------------------------------------TGCAACAAAGGTCATGCTGC--------
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>reverse_2334
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-------------CATTGCCGACACATAAGGCG-----------------------------------------------
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------------------------
