>input_sequence_81656
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------ATGAAGAGTAGCACGCTCGTGGCGATCCTGATTCTCCAGGCCGTCC
TGGTCATGGGAATCCTCTCACAAGCGAACGGTACG--TGCTGATTGCCTTTTTGTA-TGGCGTGGAGATTTTAGCTT---
---------------------------------------------------------------------TGACATGCATT
TGTTATCAAATGTACTAA----TTTGATTGCACCCCCGCAAAAAAAATAAAAATTGATTGCATGTGTCCGTG--------
CAGCCGAGTTCCCGAAGTGCTGCGACAACTGTAGGTTCTTCTCGGGGGCCGTGGTCTGTGACGACGCCGGCCCCAAGTGC
CGCGACGGCTGCGTGAACTGCCGCGTCGTGCAGACGAGCCCCACGAAGACGTTCCGGTGCGCCGATGCACGCGGCGACGA
CGGCACGCCCTGCCCGCCCTGCAAGAAGTACTGA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1A_1_TraesCS1A01G265900
GATCGTTTTATTAAAAAATAACATTTGGTATACAAATAGTTGCGTTCCTATTGATTTACTATGCAAAAT------CAAGA
AAATCAAAACATAAGTCATAAGACCACGACAG-TACATTTTTATGTATATTGTTACTATGTTTTTACATTCATAATTTTA
CATAACATAAAATATGTTTTTACTACTGATGTGTATTTTCTTACGTTCTTGTTTGACTTCCGACGTAAGATAAAATTTTC
GGTACATGAAAATAAGGTGCAGTGATATTAAAATAGATGGGGCAAAG--AATACAATCTGGGTGATGAATAAGCATTTAT
GTGCCCTCGGCAAAAA--AA-CTATCATTTCAGCTCAATGCGACATAAATATATACTCAATTATTATTTTTCCGCCCA--
GGGCACATAATGTCGTATA-------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TTATTTTGCAATTCCTTTGTTAGATCATCTTACATTATAG-------------TCCTTGCGTTG
CCATGTTTTGTTTCATAATTTTTGTCAACTTCCACACCGTCGGAACCGCATAAGGGTTCGTAGTAACT------------
-AAAATCGCCATCCTAGAAATTAGTTTGCTAGGTACACTGAGGTGATTGGACGTGCACACACAACACGAAGAATC-----
------------AATCGACCCACCGCTTCGCCGCGAATAGAAATTGTCCTTTTCATACATAACCGAATAATCCTGAGAAA
GTAGGTGCGCATATGCGCTGGACATGGAAGATGGAGATGTATGCCTAACAAGTCCAAGCCGCCTTTAAAGAAAAATGGAG
TACGTCCAAGCTAGCCAGCATAT-----CAAAAAAAAAAAAGGTCCAAGCTAGCCAGGAGTCAAACAAGTTTATCCCAAG
CACCTACCCCACCACGATC-------ACAATGTATAGCTGACGCAGCAAATTGGC--ATGTTTCAAGAACGGGCACCTAT
ATATAGAGTTGCTTGTAGCTCTGGCTAGACACATCTACAGCATAAACCATCATTCTACGGG-TAGACA--GGACAAGGCG
AGAACTTTGC---TAGAGAAGTGTAGAAGCAACAATGAAGAGTAGCACGCTCGTGGCGATCCTGATTCTCCAGGCCGTCC
TGGTCATGGGAATCCTCTCACAAGCGAACGGTACG--TGCTGATTGCCTTTTTGTA-TGGCGTGGAGATTTTAGCTT---
---------------------------------------------------------------------TGACATGCATT
TGTTATCAAATGTACTAA----TTTGATTGCACCCCCGCAAAAAAAATAAAAATTGATTGCATGTGTCCGTG--------
CAGCCGAGTTCCCGAAGTGCTGCGACAACTGTAGGTTCTTCTCGGGGGCCGTGGTCTGTGACGACGCCGGCCCCAAGTGC
CGCGACGGCTGCGTGAACTGCCGCGTCGTGCAGACGAGCCCCACGAAGACGTTCCGGTGCGCCGATGCACGCGGCGACGA
CGGCACGCCCTGCCCGCCCTGCAAGAAGTACTGATCGCTCATGTTCA----ATAAGATGTTGTGCCGATAATAAAAGCTC
AGATGGGTTGAGCGGAGCTGTTGTGGTTGTA---CGTGCACGTGGTCCACGCCCAACAACAATTGTTGTTGTTG------
TCCTCAGTCTTTATCTTTTC--TTCTTCTTAAGAAAAACCTGTTGT---TGCTCCGTGGATAAGCTCT------TGTATC
AGTTTATGCATTTCTGCTCAATCAAATAAAATATTTGTCATACCTCCTCTCGCCTCTCGTGTCGCCTCCCTCACGGACGA
CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTAGTG
ACTCCTCCTGTGCCCGTCCTCCCCTCCACCGCCGCAGGTGGTCGGCGCCGGGCTAAGCCCGTGCGTGCGACACGGTGGCG
GAGGC-------C-TCTCCCCTCTCTCCCGGATCCATGGGTGGCGCGGGTGCCCAGATCCGTGGAGGTCCGGCCCCCACG
GCGGC----------GCGGCGGCCCAGCG------GCGGTGCCTATGGTGCTGCCGATGGGAATCGGCCGGCTGCAA--G
GGGCGCCGGTGGCCGGGGCGGCGACCCCATGGCTGGATGGCAGCGCGCCCATTGGTCCGTCCGGTTTCGTCCCATCCCGG
ATCTGGTGACTACCGGACGGCCT-G-GGGG-TTGGCGGCGGCCCGGCGTGGCTGGCGATCTGGACGCGGTGGTGTC-GGC
GGC---T---CGCTGGTCTGCCGGAGCTCCAGGGGTATCATAGTCTCCGACTCGATCTGCTCCAGTTTGTGCTAGCTCCG
GTATAGGGAGACTGTCGTCATCTCCCGATGCTCGCTGCATGGATCTGGCGGCGA
>chr1D_1
GATCG-TTTTATTAAAAT-AACGTTTGTTATACAAATAGTTGCGTCTCTATTGATTTACTACGCAAAATTTGGCACAAGA
AAATCAAAATATAAGTCATAAGACCACGCT-GTTACATTTTTATGTATATTGTTACTATGTTTCAACATTCGCAATTTTA
CGTAGCATAAAATATGTTTTACA-GCTGATGTGTATTTTCTTACGCTCTTGTTTGACTTCCGACGTAAGATAAAATTTTC
GGTACGTGAAAATATGGTGCAGTGATATTAAAATAGAGGGGGCAAAG--AATACACTCTGGGTGGTGAACAAGCA-TTAT
GTGCCCTCGGCAAAAA--AAACTATCATTACAGCTCAATGCGACACAAATATATACTCAACTAT--TTTTTCCCGCCCAG
GGGCACATAATGACGTGTACTCCCTCCGTTCCCAAATGTAAGTCTTTTTAGAGATTCTAATATAGACTACATTCAGAGCA
AAATGAGTGAATTACACTCTAAATATGCCTATATTCACCCATATGTAGTTCATATTCAAATATCTAAAAGACTTATATTT
AGGAACGGAGGGAGTATTATTTTTCAATTCCTCTGTTAGATCATCTTACATTATAGTCCTGTCCTTGTCTCCTTGTGTTG
CCATATTTTGTTTCATAATTTTTGGCAACTTCGACACCGTCGGAACCACATACTGGTTCGTAGTAGTAACTATTGGTAGA
AAGAATCGTCCTCCTAGAAATTACTTTGCTAGGTACACTGAGGTGATCGGACGTGCGCACGCAACATGAAGAATC-----
------------AAACGACCCACCGCTTCGGCGCGAATAGAAATTTTTCTTTTCATACATAACCGAATAATCCTGAGAAA
GTAGGTGCGCATATGCGCTGGACATGGAAGATGGAGATGTATGCCTAACAAGTCCAAGCCGCCTTTAAAGAAAAATGAAA
TACGTCCAAGCTAGCCAGCATAT-----AAAAAAAAA-----GTCCAAGCTAGCCAGGAGTCAAACAAGTTTATCCCAAG
CACCTA-CCCACCACGATC-------ACAATGTATAGCTGACGCAGCAAATTGGC--ATGTTTCAAGAACGGGCACCTAT
ATATAGAGTTGCTTGTAGCTCTGGGTACACAAAACTACAGCATAAACCATCATT---------AGACA--GGACAAGCCA
ATTGCTTTGC---TCGACAAGTGTAGAAGCAACGATGAAGAGTAGCACGCTCGTGGCGATCCTGATTCTCCAGGCCGTCC
TGGTCATGGGAATCCTCTCACAGGCGAACGGTACG--TGCTGATTGCCTTTTTGTA-TGGCGTGCAGAGTTTAGCTT---
------------AAAAGGG-----------ATATCAAATTAGTTAATCACCTTACAAGACCATCCCTTTTGACATGCATT
TGTTACCAAATGAACTAATTTGTTTGATTGCACCCCCGCAAAAAAAAACTATTTTGATTGCATGTGTCCGTG--------
CAGCCGAGTTCCCAAAATGCTGCGACAACTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGACGACGCCGGCCCCAAGTGC
CGCGACGGCTGCGTGAACTGCCGCGTCGTGGAGACGAGCCCCAAGATGACGTTCCGGTGCGCCGATGCGCGCGGCGACGA
CGGCACGCCCTGCCCGCCCTGCAAGAAGTACTGATCGCGCATGCTCGGAACATAAGATGTTGCGCCGA----AAAAACTC
GGATGGGTTGAGCAGAGCCGTTGTGGTTGTA---CGTGCACGTGGTCCACGCCCAACAACAATTGTTGTTGTTG------
TCCTC-GTCGTTATCTTTTC--TTCTTCTTCAGAAAAAACCTGTT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1B_2
-ATCATTTTATTAAAAAA-AACGTTTGGTATACAAATATTTGCAC-CCTATTCATTTACCACGCGAAATTTGGCACAAGA
AAATCAAAATATAAGTCATGAAACCACGAGAGTTACATTTTTATGTATATTGTTACTATGGTTTTACATTCATAATTTTA
CATAGCATAAAATATGTTTTACA-ACTGATGTGTATTTTCTTACGTTCTTGTTTGACTTCCGGCATAAGAAAAAAA--TC
GGTACGTGAAAATATGGTGCAGTGATATTAAAATAGTGGGGGAAAATATAATACACTCTGGGTGAAGAATAAGCATTTAT
GTGCCCTTGGCAAAAAAAAA-CTATCATTTCAGCTCAAGGCGACATAAATATATACTCAGCTAT--TTTTTTCTCCCA--
GGGCACATAATGTCGTACA-------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TAATTTTTCAATTCCTTTGTTAGATCATCTTACATTATAGTCCTTCTA-------------TTG
CCATATTTTGTTTCATAATTTTTGGCAACTTCCACACCGGCAGAACCGCATACGGGTTCGCAGTAACCA----TGGTAGA
AAAAATCGCCCACCTAGAAATTACTTTGCTAGGTGCACTGAGGTGATTGGACGTGCACACACAACATGAAGAACAATCAA
AAAAAGAAAAAAAATCAACCCACCGCTTCGGCGCGAATAGAAATTGATCTTTTCATACATAACCGAATAATCTTGAGAAA
GTAGGTGCGCATATGCGCTGGACATGGAAGATGGAGATGTATGCCTAACAAGTCCAAGCCGCCTTTAAGGAAAAAGGAAA
TACGTCCAAGCTAGCCAGCATATCCAAAAAAAAAAAG-----GTCCAAGCTAGCCAGGAGTCAAACAAGTTTATCCCAAG
CACCTA-CCCACCACGATC-------ACAATGTATAGCTGACGCAGCAAATTGGC--ATGTTTCAAGAATGGACACCTAT
ATATAGAGTTGCTTGCAGCTCTGGCTTGGCACAGCTACAGCATAAACCATCATTCTACGGAATAGACA--GGACAAGGTG
AGAGCTTTGC---TAGAGAAGTGTAGAAGCGACGATGAAGAGTAGCACGCTCGTGGCGATCCTGATTCTCCAGGCCGTCC
TGGTCATGGGAATCCTCTCACAGGCGAACGGTACG--TGCTGATTGCCTTTTTGTAGTGGCATGGAGATCTTAGCTT---
------------ACAAGTGACACTTAACTGATGGCAATCTAGTTAACAAGATGGTCTTGTAAGGTGATT-----------
----------------------------------------------AACTAATTTGATTGCGTGTATGCGTG--------
CAGCCGAGTTCCCGAAATGCTGCGACAACTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGACGACGCCGGCCCCAAGTGC
CGCGACGGCTGCGCGAACTGCCGCGTCGTGGAGACGAGCCCCAAGAAGACGTTCCGGTGCGCCGATGCGCGAGGCGACGA
CGGCACGCCCTGCCCGCCCTGTAAGAAGTACTGATCGCACATGCTCAGAAATTAAGATGTTGCGCCGAAAATAAAAACTC
GGATGGGTTGAGCAGAGCCGTTGTGGTTGTAGTACGTGCACGTGGTCCACGCCCAACAACAATTGTTGTTTTTGCTGTTG
TCCTC-GTCGTTATCTTTTC--TTCTTCTTAAGAAAAACCTGTTGT---TGCTCCGTGAATAAGCGCT------TGTATC
AGTTTATGCGTTGCTGCTCAATCAAATAAAACATTTGT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1A_772
AAAAAGGAAACG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------A-----GTCCAAGCTAGCAAGGAGTCAAACAAGTTTATCCCAA-
----------ACCACGATAACAAAAAACAATTCATAGCTGACGCGGCAAGTTGGC--ATGCTTCAAGAACTGACATCTAT
ATATAGAGTTGCTTGTAGCTTTGGCCAGGCACAACCACAACATAAACCATCATTCCACGAG-CAGACG--GGACAGTGCA
GAGC--TTCCCTATAGAGAAGTTTAGGAGCAACGATGAAGAGTAGGACACTCGTGGTCATCCTGGTTCTCCAGGCCGTCC
TGGTCATGGGGATCCTCTCACAGGCCAACGGTATGGTTGCTGGTTGCCGTATTGTGATTTCGTTGAGATATTTAGC----
--TTACACACACACAAGTGATAGTTAACTGATGTCAATCCAGTTAACAAGGCG---------------------------
---------ATTAACTGA----TATGAT--------------------------------------TCCATG--------
CAGCCGAGTTCCCAAAGTGCTGCGACAGCTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGACGACGCCGGCCCCAAGTGC
CGCGACGGCTGCGTGAACTGCCGCGTCGTGCAGACGAGCCCTAAGAAGACGTTCCGATGCGCCGATGCACGCGTCGACGA
TGGCACGCCCTGCAAGCCCTGCAAGAAGTACTGATCGCTCATGCTCAGAACATCAGATGTTGCGCCGAAAATAAAAGCTG
GGATGAGTTGAGCAGAGCCGTTATGGCT---GTACGTGCACGTGTTCCACGCCCAACAACAATTGTTGTTATCATCGTCG
TCG------TTATGCTTTTCTCTCTCTCTCCAGAAAAAGCTGTTGTCGCTGCTCCGTGAATAA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1D_784
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GTCCAAGCTAGCAAGGAGTTAAACAAGTTTATCCCAA-
----------ACCACGATAACAAAAAACAATTCATAGCTGACGCAGCAAATCCGTATATGCTTCAAGAACGGACATCTAT
ATATAGAGTTGCTTGTAGCTTTGGCCAGGCACAACCACAGCAAAAACCATCATTCCACGAG-CAGACGCGGGACAGTGCA
GAGC--TTCC---CAGAGAAGCTTAGGAGCAACGATGAAGAGTAGCACACTCCTGGTCATCCTGATCCTTCAGGCCGTCC
TGGTCATGGGAATCCTCTCACAGGCGAACGGTATGGTTGCTGATTGCCGTATTCTGATTTCATTGTAATCTTTAGC----
--TT--ACACACACAAGTGATAGTTAACTGATGCCAATCCAGTTAACAAGGCG---------------------------
---------ATTAACTGA----TCTGAT--------------------------------------TCCATGCGTGCGTG
CAGCCGAGTTCCCCAAGTGCTGCGACAACTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGATGACGCCGGCCCCAAGTGC
CGGGACGGCTGCGTGAACTGCCGCGTCGTGCAGACGAGCCCTAAGAAGACGTTCCGATGCGCCGATGCTCGCGCCGACGA
CGGCACGCCCTGCAAGCCCTGCAAGAAGCACTGATCGCACATGCTCAGGACATAAGATGTTGGACCGAAAATAAAAGCTC
GCATGGGTTGAGCAGAGCAGTGGTGGCT---GTACGTGCCCGCGGTCCACGCCCAACAACAATTGTAGTTGTCATCGTCG
TCG------TTATGCTTTTT--TCTCTCTCCAGAAAAAGCTGTTGTCATTGCTCCGTGAATAAACACATACATATGTATC
AGTGTATGCGTCTCTGCTCAATTAAATAAAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1B_980
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TAGAGAAGTTTAGGAGCAACGATGAAGAGTAGCACACTCGTGGTCATCCTGGTCCTCCAGGCCGTCC
TGGTCATGGGAATCCTCTCACAGGCGAACGGTATGGTTGCTGATTGCCGTATTGTGATTTCGTTGAGATCCTTAGCTTTA
CATT--ACACACACAATTGATAGTTAACCGATGCGAATCCAGTTAACAAGGCG---------------------------
---------ATTAACTGA----TTTGAT--------------------------------------TCCATG--------
CAGCCGAGTTCCCCAAGTGCTGCGACAACTGCAGGTTCTTCTCGGGGGCCGTGGTCTGCGACGACGCCGGCCCCAAGTGC
CGCGACGGGTGCGTGAACTGCCGCGTCGTGCAGACGAGCCCTAAGAAGACGTTCCGATGCGCCGATGCACGCGTCGACGA
CGGCACGCCCTGCAAGCCCTGCAAGAAGCACTGATCGCACATGCTCAGAACATAAGATGTTGCACCGAGAATAAAAGCTC
GGATGGGTTGAGCAGAGCCGTTGTGGTT---GTACGTACACGTGTTCCATGCCCAACAACAATTGTTGTTGTCATCGTCG
TCG------TTATGCTTTTA--TCTCTCTCCAGAAAAAGCTGTGGTCGTTGCTCCCTGAATAA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr7B_1889
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------GCCAGCG
ACTCCTCCCGTGCCAGTCCTTCCCTCCGCCGCCGCAGGTGGTCGGCGCCAGGCTAAGCCCATGCGTGCGACGCGGTGGCG
GAGGG-------C-T------TCTCCCCCGGATCCATGGGTGGCGCAGGCGCCCAGATCCGCGGAGGTGCAGCCCCCACT
TCGGCCCACGGCGGCGCGGCA------CG------ACGACGCCTGTGGTGGTGTCGATGGGAATCAGCCAGCTGCACAGG
GGGCGCCGGTGGCCGGGGCGGCGACCCCATGGCTGGGTGGCGGCGCGCCCGTTGGTCCGACCAGTTCCAGCCCATCCCGG
ATCTGGTGACTACCGAACGGCGC-G-GGGG-T-GGCGGCGGCCCGGCGCGGCTGGCGATCTGGATACGGTGGTG-C-GGC
GGC---T---CGCTGGTATGCCGGAGCTCCAGGGGCATCATCGTCTCCGACTCGATCTGCTCCGGTTCATGCTTGATCCG
GTACAGGGAGACTGTCGTCATCTCCCAGTGCTAGCTGCATGGATCTGGCGGCG-
>chr2B_1889
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------GCCAGAG
AGTCATCCCGTGCCCGTCCTCCCCTCCG---CCGCAGGTGGTCGGCGACGGGCTAAGCCCGTGCGTGCGACACGGTGGCG
GAGGG-------CCTCTCCCCTCTCCCCCGGATCCATGGGTGGCGCGGGCGCCCAGATCCGCGGAGGTGCGGCCCCCGCT
TCGGTCCAAGGCAGCGCAGCGTCCCAGCG------GCGACGTCTGTGGTGATGCCGGTGGGAATCGGCCGGTTGCATAGG
GGGCGCTGGTGGCCGGGCCGGTGACCCCATGGCTAGGTGGCGGCGGGCCTGTTGGTCCGACTGGTTCCGGCCCGTCCTGG
ATCTGGTGACTACCGGACGGCACGG-GGGG-T-GGCGGCGGCCCGGCGTGGCCGGCGATCTGGACGCGATGGTGCC-GGT
GGCTCTT---CGCTGGTTTGCCGGAGTTCCAGGGGTATCATCGTCTCCGACTCGTTATGCTCCGGTTCGTGCTAGTCCCG
GTCCAGGGAGACTGTCGTCATCTCCCGGTGCTAGCTGCATGGATCTGGCGG---
>chr4A_1889
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------GCCAGAG
ACTCGTCCAGTGCCCGTCCTCCCCTCCGCCGCCGCAGGTGGTCGGCGCCGGGCTAAGCCCGTGCGTGCGACGTGGTGGCG
GAGGG-------CCTCTCCCCTCTCCCCCGGATCCATGGGTGGCGCGGGCGCCTATATCCGCGGAGGTGCGGCCCCCACT
TCAGCCCACGGCGGCGTGGCCTCCCAGTG------GTGGTGCCTGTGGTGGTGCCGGTGGGAATCGGCCGGCTGCACATG
GGGCGCCGGTGGCCGGGGCGGCGACCCCATGGCTGGGTGGTGGCGCGCCTGTTGGTCCGACCGGTTCCGGCCCGTCCCAG
ATC-GGTGTCTACCGGAGGCGCG-G-GGGGAA-GGTGTCGGCCCCGCGTGGCTGGCGATCTGGACGCGGTGGTG-CCGGT
GGATCTT---CGCTGGCCTGCCTGAGATCTAGGGGTATCATCGTCTCTGACTCGTTCTGCTCTGGTTCGTGCT--CTTCG
GTCCAGTGAGACTGTCGTCATCTCCCGGTGCTGGTTGCATGGATCTAGCGGCG-
>chr4D_1892
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------AGTG
ACTCCTCCCGTGCCCGTCCTTCCCTCCGCCGCCGTAGGTGGTCGGCCCCGGGCTAAGCCCATGCATGCGACGCGGTGGCG
GAGGG-------CC-------TCTCTCCCGGATCCATGGGTGGCGCGGGCGCCCAGATCAGCGGAGGTGCGGCCTCCACT
TCGGCCCACGGTAGCGCGGCGTCCCAGCG------GCGGCGCCTGTGGTGGTGCCGATGGGAATCGGCCGGCTGCACAGG
GGGCGCCAGTGGCTGGGGCAGCGACCCCGTGGCTGGGTGGCGGCGCGCCCGTTGGTCCGACCGGTTCCGGCCCATCTCGG
ATCCGGTGACTATCGGACGGTGC-GTGGGG-T-GGCGGCGGCCCGGCGTGGCCGGCGATCTGGACACGGTGGTG-CCGGC
GGC---T---CGCTGGTCTGCCGGAGCTCCAGGGGTATCATCATCTCTGACTCGATTTGCTCCGGTTCGTGCTAGCTCCG
GTACAGGGAGACTGTCGTCATCTCCCGGTGCTGGCTGCATGGATCTGGCGGCG-
>chr7D_1895
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
ACTCCTCCCGTGCCCGTCCTCCCCTCCGCTGCCGCAGGTGGTCGGCGCCGGGCTAAGCCCGTGCGTGCGACGCAGTGGCG
GAGGG-------CCTCTCCCCTCTTCCCCGGATCCATGGGTGGCGAGGGCGCCCAGATCCGTGGAGGTGCGGCCCCCACT
TCGGCCCACGGCGGTGCGGC------GCG------GCGGCGCCTGTGGTGGTGCCGATGGGAATCGGCTGGGTGCACAGG
GGGCGCCGGCTGCCGGGGCGGCGACCCCTTGGCTGGTTGGCGGCGGGCCCGTTGGTCCGACCGGTTCCGGCCCATCCCGG
ATCTGGTGACTACCGGATGACGTGG-GGGT-T-GGCGGCGGCCCGGCGTGGCCGGCGATCTGGACACGGTGGTG-CTGGC
GGC---TC---GCTAGTCCACTGGAGCTCCAGGGGTATCATCGTCTCCGACTCGATCTGCTCCGGTTCGTGCTAGCTCCG
GTACAGGGAGACCGTCGTCATCTTCCGGTGCTGGCTGCATGGATCTGGCGG---
>chr1D_1901
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TCCCGTGCTCCTCTTCCCCTCCGCCGCCGCAGGTGGTCAGCGCCGGGCTAAGCCCGTGCGTGCGACGCGGTGGCG
GAGGG-------CCTCTCCCCTCTCCCCCGGATCCATGG-TGGCGCGGGCGCCCAGATGCGCGGAGGTGCGGCCCCCACT
TCGGCCCACGGTGGTGCGGC------GTCCCAGCAGCGGCGCCTGTGGTGGTGCCGATGGGAATCGGCCGGTGGCACACA
GAGCGCCGGTGGCCGGGGCGGCGACCCCATGGCTGGGTGGCGGCGCGACCGTTGGTCCGATCAGTTCCGGCCCGTCCCGG
ATCTGGGGACTACTGGACAGCAC-G-GGGGAT-GGTGGCGGCTCGACGTGGCCGGTGATCTGGACGCGGTGGTG-CCGGC
GGC---TCTTCGCTGGTCTGCCGGAGTTCCAGGGGTATCATCGTCTCCGATTCGTTCTGCTTCGGTTTGTGCTAGCTCTA
GTCCAGGGAGACTGTCGTCATCTCCTGGTGCTGGCTGCATGGATCTGGCGG---
>chr7D_1902
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CCCGTGCCCGTCCTCCCATCCGCCGCCGCAGGTGGTCGGCGCCGGGCTAAGCCCGTGCGTGCGACGCGGTGGCG
GAGGGTCTCTCCCC-------TCTCATCCGGATCCATGGGTGGCGCGGGCCCCCAGATCCGCGGAGGTGCGGCCCCCACT
TCGGCCCACGGCGGCGTGACCTCCCAGCG------GCAGTGCCTATGGTGGTGCTGGTGGGAATCGGCCGGATGCACAGG
GGGCAGCGGTGGCCGAGGCGGCGACCCCATGGCTGGGTGGCGGTGCGCCCGTTGGTCCGACCGGTTCCGGCCCGTCCCGG
TTCTGGTGACTACCGGACGCCGC-G-GGGG-T-GGCGGCGGCCCGGCGTGGCCGGCGATCTGGACACGGTGGTTCC-AGT
GGC---TCTTCGCTGGTCTGTCGGAGCTCCAGGGGTAACATCGTCTCCGACTCGATCTGCTCCAGTTCGTGCTAGCTCCG
GTCCAGGGAGACTGTCGTCATCTCCCAGTGCTGGCTGCATGGATCTGACGGCG-
>SNPs
------------------S---S----------------------S---------------S------------------
---------S-------------------S--------------------------------------------------
----S---------------SSSS--------------------------------------------------------
-----S--------S----------------------S-----------------S------------------------
------------------------------------------------------------S---SS-------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S---------------------------------------------------S----
----S-------------------S---------------------------S--------------S------------
----------S------------S------------------------------------------S-------------
------------------------------S----------------S--------------------------------
-----------------------------------------------------------------------------S-S
----------------------------S--------SSSSS--------------------------------------
------S-------------------------------------------------------------------------
---------------------------------S----------------------------------------------
---S-----------------------------S----------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
-----S------S----------------------------------SSS--S---------------------------
-------------------------------S--------------------------S---------------------
-------------------------------------------S------------------------------------
-------------------------------------------S------------------S-----S-----------
S------------S----S-------------------------------------------------------------
-----S----------------------------------------------------S------S--------------
---------S---------------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----
--------S------------------S----------------------------------------------------
----S--------------------------------------------S------------------S----------S
S--------------------S----------------------------S-------------------------S---
------------------------------------S----S--------S--------S------S--S----------
--------------------------------S-----------------------------------------S-----
-----------------------------------------S--------------------------------------
---S-----------------------S----S--------------------S
>forward_645
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATAGTCCTTGCGTTG
CCATG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_1960
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ATACCTCCTCTCGCCTCTCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
