>input_sequence_81654
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-------------------ATGGCC---AACCACGGAGCCGCCGCTCTCCTGATCGCGTCCCTGCTCGTGGCGGCGGTCG
CCCTCGCCGACGCCAGGGTCACCGCGATGCAGCTGCAGCGCGGCAGCATTAACGGAGGTACGTCCACGTCAACCGATCAA
CA---TCGTCCATGACC------------------------TGGCCAAATGTGCTGGA-TTGTA--------ACCCTTTG
GACGTGTGC--------------GTTTCGCAGTTTATGCGTTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGG
TGAGCGCGGTGCAGACGGGCGAGACCTGCTCCTCCCTCGCGGAGAGCGCCGGCCTGAGCCAGGAGGACTTCCTGGGCTTC
AACCCCAACATCAACTGCGTCAGGATCTTCGTTGGCCAGTGGGTCTGCCTCGACGCATCCTCTGCCTAA-----------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G316500
GGGTGCTTGGATACGTTTTAGTCTCATGACTAAAAGTAGTGGGACTAAAACTTGCTAGCCTCACCCATGCTTGAATCCAA
GTACTAAAGAGACTAAAATCAAATTTATGAGCATTTATTATCCTCCAAACTCTCCAATCCAGAACTCGCCCGTGTTAAAA
GAGAGGAGTTAAATGAGGAGAGAGAGGACTAATCCACATTTTAGTAGGGGTACCCTGACTAGAAAATTTTAGTCTCAAGA
CTAGTTTTAGCCCCTCTTTAGTCAGGGGTGCTTGGAACTTTAGCCTCTTAAAGAGACTATTTTTAGTCAGACTAAAATAA
GTCCCTTGGATCCAAGCACCCTCTTAGTTGAAGAAATTGCATGTCAATTTGACCGTTCGCTGAAAAAACGCTCGAGAGAG
TGTTCTCCTGCATGGTATGAAAAAGAAAATCATCGAGGATACGAGATCTAGAGTAACTGATACACCGGAGACTGAACTGC
ACTGACCGAACAGATCGAGACTGATAGACAACAATCCCATTCCTCCACTGTTATCTCTTTTTTTTTTCCTACGATTTTCG
TTCTTGTTTCTCCACTGTCACTGCGCTACCACCAACATGGAGCAAGACAGTTTTCAGAAAAAAGAAAA----------GT
GAGCAACGTGAGTGTAAAAT--ATTAG-GCCCGGTCGAAATCACACGGCGGTCGAAGAATATTACAG---TACAAAGCAG
TTCCATAGGAATCACAGACGGGATTACCCCCGGGCC-CGGCCTGTAAATGTTAGGAACGACATGT----CCATACCGTTC
TCAGCATAAGCAGTATCGCCCGTGCATTGGACGCCGTCTCCAAGGCCATGGCCGGAACCATGTCGTCACACT----CT--
--CCTATCGACTTTCGACTGTCGAGCTC-----TCGTTACGCTATAAAAAGGGCCGAGGACCAAGCTAT-CTCAT-----
---CACCACC---GAAGCAGAGCCTGACGAGCACCTACTATCCGCTTATA--C----ATCCTTCCTTCTCGTCGGCAGCA
TCTGCATCTGC-------AATGGCC---AACCACGGAGCCGCCGCTCTCCTGATCGCGTCCCTGCTCGTGGCGGCGGTCG
CCCTCGCCGACGCCAGGGTCACCGCGATGCAGCTGCAGCGCGGCAGCATTAACGGAGGTACGTCCACGTCAACCGATCAA
CA---TCGTCCATGACC------------------------TGGCCAAATGTGCTGGA-TTGTA--------ACCCTTTG
GACGTGTGC--------------GTTTCGCAGTTTATGCGTTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGG
TGAGCGCGGTGCAGACGGGCGAGACCTGCTCCTCCCTCGCGGAGAGCGCCGGCCTGAGCCAGGAGGACTTCCTGGGCTTC
AACCCCAACATCAACTGCGTCAGGATCTTCGTTGGCCAGTGGGTCTGCCTCGACGCATCCTCTGCCTAACACGCCGTT--
---GGATCATGGATGTGCGTG----CGCAGCATCGTTAAGTTGCTGCTACTTA---------------------------
---------------------------------------------------------TTTATGAATAAAGGAGGCTAAGT
CGTTCTGACGCTCTTCAGTGTGCCT---CCGCCATTATTCGAGTTGAATTTGGTATTTGT-------------ACTTCCC
TCGCAAAAGGA--------TCGAGGTTGTAGTCC------GTCACTCTGTCTTTGTGCCAACTTTGGCTTAAAAATTGGT
-TGAGTTGGTTTAAGCTTGATTACCAGTGTGTTGCGTTTACCTTGTGTGTCTCTTTCCTTG-TTGTTGCTGATTGCCACT
GAGTTAACTAGACAATACCCCGCGCGTTGCAGCGGGCAATGCAGCAATGATT--TATAGAGATGAAAAAATAGAAATTGA
TCATGTGTGATATTTATTAGATTGACACATTTCAGCGTAGAAAAGTAAACAATGATCCATCTTCTCAATTCTAACTCATC
AAGTCCTAGAGGAGCAATCTTGTATGCACAGGTCGAGAGGAGAAAGAAAACACTAAAGTAATTTATCAATGGAACCTCCA
TCATACCTAGCAGCTGACAAACAAAACCCTCTGTTTTGAACCTTTGTATTAGAAGAACGACAATGTCAGTCACACAATGG
TACCAGTCGAGTATTAGATCGATCTCAAGTCATTCAAAATATTGGAATAATACTGCCACACAGCAACATACCTGAAAATG
AACTGCGCTATGCCATATGTTGTGATTCTATAGAACAACCAAAGGAAAGCAATAAAAATGCAAATCAAAGGTATACT-GA
AATAACATATGTATGTGTGTGTGTGAGAGAGAGACGATTCTAGCTGTACATAGTAAATGGTAAGTTCTGTTTGTTTATTC
TTTGAAGAAAAATAAATGAA-ACGAATGAAGACGAAATTTTCACCATGTAGCGCTTCCAATCAAAATCAACCAGATCAGA
GAGATGAACATGATCCGTTCCAATCCTGATCTCGACGCATACTTGCCAGTTGTGCTTGACTTGGAGAGTATTTTAGGC
>chr3A_402
--------------------------------------------------------------------------------
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-GTTCTCCTGCATGGTATGAAAAAAAAATTGATCGCGGATACAAGATCTAGAGTGACTGATACACTGGATACTGAACTGC
ACTGACCGGACAGATCGAGACTGATAGACAACAATCCCATTCCTCCACTGTTATCTCTTTTTTTTTCTGCGATCAATTCG
TTCTTGTTTCTCCACTATCACTGCGCTACCACCAACATGGAGCAAGACAGTTTTTC----------AA----------GT
GAGCAACGTGAGGGTAAAAT--ATTAG-GCCCGGTCAAAATCAAACGGCGGTCGAAGAATATTACAGT---ACGAAGCAG
TTCCATAGGAATCACAGACGGGATTACCCC-GGGCC-CGGCCTGTAAATGTTAGGAACGACATGT----CCATGCCGTTC
TCAGCATAAGCAGTATCGCCCGTACATTGGACGCCGTCTCCAAGGCCATGACCGGAACCATGGCGTCACACT----CTCC
ATCCTATCGACCTTCAAGTGTCGAGCTC----GTCGTTACGCTATAAAAAGGGCGAGGGCTAAGCT--T-CTCTT-----
---CACAACC---AAAGCAGAGACTAACAAAGCACC--TATCAGCTTACCCTC----ATCCTTCCTTCGCGTCGGCGGCA
TCTGCATCTGC-------AATGGCC---AACCACGGAGCCGCCGCTCTCCTGATCGCGTCCCTGCTCGTGGCGGCGGTCG
CCCTCGCCGACGCCAGGGTCACCGCGATGCAGCTGCAGCGCGGCAGCCTTAACGGAGGTACGTCAAC------CGATCAA
CA---TCGTCCATGATC------------------------TGCCCAAATGTGCTGGA-TTGTA--------ACCCTTTG
GACGTGTGCCTGACTGTGTGTGCGTTTCGCAGTTTATGCACTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGG
TGAGCGCGGTGCAACAGGGCGAGACTTGCTCCTCACTAGCGGAGGACGCCGGTCTGACCCAGGAGGACTTCCTGGGCTTC
AACCCCAACATCAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCGTCCTCTGCCTAACACGCCGTT--
---GGAT-------GCACGTG----CGCAGCATCGTTA-GTTGCCGCTACTAC---------------------------
----------------------------------------------------------TTATGAATAAAGGAGGCTAAGT
CGCTCTGACGCTCTTCAGTGTGCCT---CCGCCATTATTCGAGTTGAATTTGGTATTTGT-------------ACTTCCC
TCGCAAAAGGA--------TCGAGGTTGTAGTCC------GTCACTCTGTCTTTGTGCCAGCTTTGGCTTCAAAATTGGT
-TCAGTTGGTTTAAGCTTGATTACACCAG---TGCGTTTACCTCGTGCGTCTCTTTCCTTGGTTGTTCCTGATT------
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------------------------------------------------------------------------------
>chr3A_557
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----------------------------------------------------------------------------TTCG
TTCTTGTTTCTCCACTGTCATTGCGCTATCACCAACATGGAGCAAGACAGTTTTTC----------AAACAAAAAAAAGT
GAGCAGTGTGAGTGTAAAGT--ATTAG-GCCCGGTCAAAATCACATGGCGGTCGAAGAATATTACAGTAGTACAAAGCAG
TTCCATAGGAATCACAGATGGGATTACCCC-GAGGCCCACCCTG----TGTTATGAACGACATGTCCATCCATGCCGTTC
TCAGCATAAGCAGCATCGCCCGTGCGTCGGACGCCGTCTCCAAGGCCATGGCCGGATTCTCTTCGTCACACT----CTCC
ACCCTATCGACTTTCGAGTGTCGAGC-------TCGTTATGCTATAAAAAGGGCGAGGGCTAAGCT--CTCTCAT-----
---CACCACCACCAAAGCAGAGCCTGACGAGCACCTATCATCCGCTTATA--CATATATCCTTTCTTCGCGTCGGCAGCA
TCTGCATCTGC-------AATGGCGAAGAACCACGGAGCCGCTGCTCTCCTGATCGCGTCCCTGCTCGTGGTGGCCGTCG
CCCTCGCCGACGCCAGGTTCACCGCGACGCAGATGCAGCGCGGCAGCATTAACGGAGGTACGTCCACGTCAACCGGTCAA
CATCGTCGTCCATGATC------------------------TGGCCAAATGTGCTGGACTTGTA--------ACCCTTTG
GACGTGTGCCTGCCTGTCTGTGCGTTTCGCAGTTTATGCATTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGG
TGAGCGCGGTGCAGACGGGTGAGACCTGCTCCTCCCTCGCGGAGAGTGCCGGTCTGACCCAGGAGGACTTCCTGGGCTTC
AACCCCAACATCAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCGTCCTCTGCCTAATACGCCGTT--
---GGAT-------GTACGTG----CGCAGCGTCGTTAAGTTGCTGCTATTTA---------------------------
---------------------------------------------------------TGCATGAATAAAGGAGGCTAAGT
CGCTCTGACGCTCCTCAATGTGCCT---CCGCCATTATTCGAGTTGAGTGTGGTATTTTT-------------ACTTCCC
TCACAAAAGGA--------TCGAGGTTGTAGTCC------GTCACTCTGTCTTTGTGCCAGCTTTGGCTTAAAAACCGGT
-TCAGTTAGTTTAAGCCTGATTACACCAG---TGCGTTTACCTTGTGTCTCTCTTTACTTGGTTGTTCCTGATTGCCACT
GCGTTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr3B_557
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TTCC
TTCTTGTTTCTCCACTGTCACTGCGGTACCACCAACATGGAGCAAGACAGTTT--C----------AAACAGAAAAAGGT
GAGCAACGTGAGTGTAAAAT--ATTG-TGCCCGGTCAAAATCACACGGCGGTCGAAGAATATTACAGTAGTACAAAGCAG
TTCCATAGGAATCACAGATGGTATTACCCCAGGGCC-CGGCCTGCAAATGTTAGGAACGACATGT----CCATGCCGTTC
TCAGCATAAGCAGTATCGCCCGTGCGTCGGACGCCGTCTCCAAGGCCATGGCCGGAATCTTTTCGTCACACC----CTCC
ATCTTATCGACTTTCGAGTGTCGAGC-------TCGTTACGCTATAAAAAGGGCGTGGGCTAAGCT--TTCTCAT-----
---CACCACC---AAAGCAGAGCCTGACGAGCACCTACTATCCACTTATA--C----ATCCCTCCTCCTCGTCGGCAGCA
TCTGCATCTGC-------AATGGCC---AACCACGGAGCCGCCGCTCTCCTGATCGCGTCCCTGCTCGTGGTTGCGGTCA
CCCTCGCCGACGCCAGGATCACCGG---GCAGCTGCAGCGCGGCAGCATTAACGGAGGTACGTCCGCGTCAACCGATCAA
CA---TCGTCCATGATC------------------------TGGCCAAATGTGCTGGA-TTGTAAGTTTGTAACCCTTTG
GACGTGTGCCTG----TCTGTGCGTTTCGCAGTTTATGCATTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGG
TGAGCGCGGTGCAGACGGGCGAGACCTGCTCCTCCCTCGCGGAGAGCGCCGGCCTCAGCCAGGAGGACTTCCTGGGCTTC
AACCCCAACATCAACTGTGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCATCCTCTGCCTAACGCGCCGTT--
---GGAT-------GTACGTG----CGCATCATCGTCAAGTTGCTGCTACTTA---------------------------
---------------------------------------------------------TGTATGAATAAAGGAGGCTAAGT
CGCTCTGACGCTCTTCAGTGTGCCT---CCGCCATTATTCGAGTTGAATTTGGTATTTGT-------------ACTTCCC
TCGCAAAAGGA--------TCGAGGTTGTAGTCC------GTCAATCTGTCTTTGTGCCAGCTTTGGCTTAAAAACCGGT
-TCAGTTAGTTTAAGCTTGATTACACCAG---TGCGTTTACCTTGTGTCTCTCTTTCCTTGGTTGTTCCTGATTGCCACT
GCGTTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr3B_557
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TTCC
TTCTTGCTTCTCCACTGTCACTGCGCTACCACCAACATGGAGCAAGACAGTTTTTTATTAAAC--------AAAAAAGGT
GAGCAACGTGAGTGTAAAAT--ACCA-TGCCCGGTCAAAATCACACGGCGGCCGAAGAATATTACAG---TACAAAGCAG
TTCCATAGGAATCACAGACGGGATTACCCCCGAGCC-CGGCCTGTAAATGTTAGGAATGACATGT----CCATACCGTTC
TCAGCATAAGCAGTGTCGCCCGTACATTGGACGCCGTCTCCAAGGACATGGCCGGAATCT------------------CC
ACCCTATCGACTTTCGAGTGTCGAGC-------TCATTACGCTATAAAAAGGGCGAGGGCTAAGCT--TTCTCAT-----
---CACCACC---AAAGCAGAGCCTGACGAGCACCTACTATCCACTTATA--C----ATCCCTCCTCCTCGTCGGCAGCA
TCTGCATCTGC-------AATGGCC---AACCACGGAGCCGCCGCTCTCCTGATCGCGTCCCTGCTCGTGGTGGCGGTCA
CCCTCGCCGACGCCAAGATCACGGG---GCAGCTGCAGCGCGGCAGCATTAACGGAGGTACGTCCGCGTCAACCGATCAA
CA---TCGTCCATGATC------------------------TGGCCAAATGTGCTGGA-TTGTA--------ACCCTTTG
GACGTGTGCCTG----TCTGTGCGTTTCGCAGTTTATGCATTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGG
TGAGCGCGGTGCAGACGGGCGAGACCTGCTCCTCCCTCGCGGAGAGCGCCGGCCTCAGCCAGGAGGACTTCCTGGGCTTC
AACCCCAACATCAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCGTCCTCTGCCTAACACGCCGTT--
---GGAT-------GTGCGTG----CGCAGCATCGTTAAGTTGCTGGTACTTA---------------------------
---------------------------------------------------------TGCATGAATAAAGGAGGCTAAGT
CGCTCTGACGCTCTTCCGCATATGCCTCCCGCCATTATTCGAGTTGAGTTTACTATTTGT-------------ACTTCCC
TCGCAAAAGGATCGAGGATTCGAGGTTGTAGTCC------GTCACTCTGTCTTTGTGCCAGCTTTGGATTTAAAACTGGT
-TCAGTTGGTT---------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr3D_597
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------------------------------------ATAGAGCAAGACAGTTTTTCTCAAGA--AAAA----------GC
GAGAAACGTGAAGCTAAAAA--ATATTTGCTCGGTCAAAATCACACGGCTAAAAATAT------------TACAAAGCAG
TTCCATAGGAATCACAGATGAGATTACCC--GGGCC-CGGCTTGTAAATGTTAGGAACGACATGT----CCATACC---C
TCAGCATAAGCAGTATCGCCCGTACATTGGA-GCCGTCTCCAAGGCCATGACCGAAACCATGTCGTCACACTCTCCCTCC
ATCTTATCGACTTTCAAGCACCGAGTTCGTTAGTCGTTACGCTATAAAAAGGGCCAGGGCTGAGCT--T-CTCTCCACCA
CAACACCACC---AAAGCAGAGCCTAAACAAGCACA--TATCCGCTTACGCTT----ATCCTTCCTTGGCGTCGGCAT--
--AGCATCTGC-------AATGGCC---AACCACGGAGTCGCCGCTCTCCTGATCGCGTCCCTTCTCGTGGTGGCGGTCA
CCCTCGCCGACGCCAGGATCACCGTGAACG---TGCAGCGCGACAGCGTTAACGGAGGTGCGTCCATGTCAGCCAATCAA
CA---TCATCCAGTTGATCTGCATGT--------GTAGCAGTGGCCAAATGTGC--------------------------
-----------------CTGTACGTTTCGCAGGTTATGCGGCGAACAAGAAGGCGGTGCCGGTGCTGACGTGCAACAAGG
TGAGCGCGGTGCAACAGGGCGAGACCTGCTCCTCGCTTGCGGAGGACGCCGGGCTGACCCAGGAGGACTTCCTGGGCTTC
AACCCCAACATCAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCATCCTCTGCCTAACACACGGTTCA
CTTGCAT-------GGAC-TG----CGCAGCATCGTTA-GTTGCTGCTACTTACTCCCTCCGTCCCATAATATAAGAATG
TTTTTTACATTAATATAGTATAAAAAAACGTTCTTATATTATGGGACGGAGGGAGTATGTATGAATAAAGGAGGCTAGTC
CCTATCCGTACA----------CCT---CCACCACTACTCAAGTTAAGTTTGGTATTTGCACTTACCTCCTGCACTTCCC
TCGCAAAAGGA--------TCGAGGTTGTAGTCC------GTCAGTCTGTCTTTGTACCAGCTTTGGGTTAAAAATTGGA
GCCAGTTGGTCGT-GCTTGATT--ACCAG---TGCGTTTACATTGTGTGTCTCTTTCCTTGATTGTGCCTGATTACCAGT
GCGTTA--------------------------------------------------------------------------
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>chr3A_622
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-------------------------------------------------------------AAGAAAA----------AC
GAGAAACGTGAAGGTAAAAAATATATTTGCTCGGTCAAAATCACACGGCTAAAAATAT------------TACAAAGCAG
TTCCATAGGAATCGCAGATGAGATTACCC--GGGCCCCGGCTTGCAAATGTAAGGAACGACATGT----CCATACCGTTC
TCAGCATAAGCAGTATCGCCCGTACATTGGG-GCCGTCTCCAAGGCCATGACCCGAACCATGTCGTCACTCTCTCCCTCC
ATCTTATCGACTTTCAAGCACCGAGTTCGTTAGTCGTTACGCTATAAAAAGG---AGGGCCGAGCT--T-CTCTCCACCA
CAGCACCACC---AAAGCAGAGCCTAAACAAGCACA--TATCCGCTTACGCTTCTCTCCAGCACAACACCACCA------
----CAGCTGC-------AATGGCC---AACCACGGAGTCGCCGCTCTCCTGATCGCGTCCCTTCTT---GTGGCGGTCA
CCCTCGCCGACGCCAGGATCACCGTGAACG---TGCAGCGCGACAGCATTAACGGAGGTGCGTCCATGTCAACCAATCAA
CA---TCATCCAGTTGATCTGCATATGTAGTACAGTAGCAGTGGCTGAATGTGC--------------------------
-----------------ATGTACGTTTCGCAGGTTATGCGGCGAACAAGAAGGCGGTGCCGGCGCTGACGTGCAACAAGG
TGAGCGCGGTGCAGCAGGGCGAGACCTGCTCCTCACTAGCGGAGGACGCCGGGCTGACCCAGGAGGACTTCCTGGGCTTC
AACCCCAACATCAACTGCGTCAGGATCTTCGTAGGCCAGTGGGTCTGCCTCGACGCGTCCTCTGCCTAACACACGGTTCA
GTTGCAT-------GGAC-TA----CGCAGCATCGTTG-GTTGCTGCTACTTA---------------------------
---------------------------------------------------------TGTATGAATAAAGGAGGCTGGTC
GCTATGCGTACA----------CCT---CTACCACAACTCAAGTTAACTTTGGTATTTGC-------------ATTTCCC
TCGCAAAAGGA--------TCGAGGTTCTAGTCTGTCAGTGTCAGTCTGTCTTTGTACCAGCTTTGGCTTAAAATTTGGG
-TCAGTTGGTCGT-GCTTGATT--ACCAG---TGCGTTTACCTTGTGTGTCCCTTTCCTTGATTGTGCCTGATTACCAGT
GCGTTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr3B_622
--------------------------------------------------------------------------------
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-------------------------------------------------------------AAGAAAA----------GC
AGGGAACGTGAAGGTAAAAAATATATTTGCTCGGTCAAA-TCACACGGCTAAAAATAT------------TACAAAGCAG
TTCCATAGGAATCGCAGATGAGATTACCC--GGGA-CCGGCTTGTAAATGTTAGGAACGACATGT----CCATACCGTTG
TCAGCATAAGCAGTATCGCCCGTACATTGGA-GCCGTCTCCAAGGCCATGACCGGAACCATGGCGTCACACTCTCCCTCC
ATCTTATCGACTTTCAAGCACCGAGTTCGTTAGTCGTTACACTATAAAAAGG---AGGCATGAGCT--T-CTCTCCACCA
CAGCACCACC---AAAGCAGAGCATAAACAAGCACA--TATCCGCTTA-GCTT----ATCCTTC----------GCGCCG
GCAGCATCTGCATCTGCAAATGGCC---AACCACGGAGTCGCCGCTCTCCTGATCGCGTCCCTTCTCGTGGTGGCGGTCA
CCCTCACCGACGCCAGGATCACCGTGAACG---TGCAGCGCGACAGCATTAAAGGAAGTACGTCCATGTCAACGAATCAA
CA---TCATCCAGTTGATCTGCATGTGTAGTACAGTAGCAGTGGCTAAATGTGC--------------------------
-----------------CTGTACGTTTCGCAGGTTATGCGGCGAACAAGAAGGCGGTGCCGGCGCTGACGTGCAACAAGG
TGAGCGCGGTGCAACAGGGCGAGACTTGCTCCTCACTCGCGGAGGACGCCGGGCTGACCCAGGAGGACTTCCTGGGCTTC
AACCCCAACATCAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCATCCTCTGCCTAACACACGGCT--
---GCAT-------GGAC-TACGCACGCAGCATCGCTA-TTTGCTGCTACTAC---------------------------
-----------------------------------------------------------TATGAATAAAGGAGGCTGGTC
GCTATCCGTACA----------CCT---CCACCACTACTCAAGTTAAGTTTGGTATTTGC-------------ACTTCCC
TCGCAAAAGGA--------TCGAGGTTGTAGTCC------GTCAGTCTGTCTTTGTACCAGCTTCGGCTTAAAAATAGGC
-CCAGCTGGTCGT-GCTTGATT--ACCAG---TGCGTTTACCTTGTGTGTCTCTTTCCTTGATTGT--------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>chr4D_1686
AACTAGAGG-----------------------------------------------------------------------
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--------------ATACCCCGCGCGTTGCAGCGGGGAATGCAGCAATGATTAATAGAGATATGCGAAAATAGAAATTGG
TCATGTGTGATATTTATTAGATTGACACATTTCAGTGTAGAAAAGTAAACAACGATCCATCTTCTCAATTCTATCTCATC
AAGTCCTAGAACAGTAATCTTGTATGCACAGTTTGTAAGGAGAAAGAAAACACTAAACTAATTTATCAATGGAACCTCCA
TAATACCTAGCAGCTGACAAACAAAACCTTCTGTTTTGAACCTTTGTATTAGAAGAACGGCAATATCAGTCACACAATGG
TACCACTCGAGTATTAGATCGATCTCAAGTCATTCAAA--ATTGGAATAATACTGCCACACAACAACATACCTGAAAATG
AACTGCACTATGCCATATGCTC--ATTCTATAGAACAACCAAAGGAAAGCAATAAAAATACAAATCAAAGGCATATTAAA
AGTTACATATGTGTGTGTGTGAGAGAGAGAGAGACCATTCTAGTTGTACATAGTAAATGGTAGGTTCCATTTGTTTATTC
TTTAAAGAAAAATAAATGAA-ACGAATGAAGACGAATTTTTCACCATGTAGTGCTTCCAATCAAAATCAATCAGATCAGA
GAGATGAACATGATCCATTCCAATCCTGATCTCAACGCATGCTTGCTAGTTGTGCTTGACTTAGAGAGGATTTTAGG-
>chr4D_1686
AACTAGAGG-----------------------------------------------------------------------
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--------------ATACCCCGCGCATTGCAGCGGGGAATGCAGCAATGATTAATAGAGATATGCGAAAATAGAAATTGG
TCATGTGTGATATTTATTAGATTGACACATTTCAGTGTAGAAAAGTAAACAACGATCCATCTTCTCAATTCTATCTCATC
AAGTCCTAGAAGAGTAATCTTGTATGCACAGTTTGGAAGGAGAAAGAAAACACTAAACTAATTTATCAATGAAACCTCCA
TAATACCTAGCAGCTGACAAACAAAACCTTCTGTTTTGAACCTTTGCATTAGAAGAACGACAATATCAGTCACACAATGG
TACCACTCGAGTATTAGATCGATCTCAAGTCATTCAAA--ATTGGAATAATACTGCCACACAACAACATACCTGAAAATG
AACTGCACTATGCCATATGCTC--ATTCTATAGAACAACCAAAGGAAAGCAATAAAAATACAAATCAAAGGCATACT-AA
AGTTACATATGTGTGTGTG--AGAGATAGAGAGACCATTCTAGTTGTACATAGTAAATGGTAGGTTCCATTTGTTTATTC
TTTAAAGAAAAATAAATGAAGACGAATGAAGACGAATTTTTCACCATGTAGTGCTTCCAATCAAAATCAATCAGATCAGA
GAGATGAACATGATCCATTCCAATCCTGATCTCAATGCATGCTTGCTAGTTGTGCTTGACTTAGAGAGGATTTTAGG-
>SNPs
SSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S-----------------------S---S-S----S------S-----------S----------S---S----------
--------S---------------------------------------------------------SSSSSSSSSS----
------------------------------------------------------SSSS----------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------------------------------SS----S-SSSSS------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
-------SSSSSSS------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--S---------------------SSSS-SSS-----------------------------------S------------
-S----SSSSSSSS----------------------S-------------------S---S---SS-------------S
-----------------------------------S----------------S--------------------S------
----------S---S----------------S-S-SS--------------------S----------------------
-S--------------------------S-----------------------------------S---------------
-----S--------------------------------SS----------------------S-----------------
------S------------S-SSS-----------------------------------S-----------S------S-
-S-S--------S--------S-S-----------S-------S------------------S----SS-----------
---S--------------------------------S--------------S------------------S---------
----------------S----------------S------S-----S---------------S-----S--------S
>forward_489
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------GACTGAACTGC
ACTGACCGA-----------------------------------------------------------------------
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>reverse_2601
--------------------------------------------------------------------------------
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----------------------------------------ACTTGCCAGTTGTGCTTGAC------------------
