>input_sequence_81538
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------ATGGCGCTAACAAAAGTTGCTCTCTTCCTTGCCCTCAACATTGGTCTCATTGCTATTGTGCATGGT
AACCCTCCAATGGTTCTTGCACCACCTTTGGTGCCTACCCCACCTGTTGCACCGGCGCCGTCGATTGGTGGTTCCTGCCC
AATCAACCCACTAAAGATAACTGTGTGCAGCAATGTGTTGTTGCTACTCAAGCTCCGGATCAATGTGCCGGAGACCGAGC
AATGTTGCCCACTGCTTAGTGGGTTGGCTGATCTAGATGCCGCAGTCTGTGTTTGCACTGCCATCAAGGCCAACCTCCTT
GGCCTCATCCCCGTCGACATTCCCGTCGACCTGACCCTCCTACTCAACCATTGTAACAAGACATATCCCTCTACTTTCAC
CTGCTCACCATGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5B_1_TraesCS5B01G342000
TGTTTCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ACACATGTATTTGGGTTTTT-
CTATGCATCTCATATCCAAGAACCAACACACTTATAGAACAAAAATAT-AATTTGATAATGAACATGGAAATATAATAAT
AGAAATAATTGCCTCTATCGAGGACATAATTCCAACAATTACATGTTTCCTTGTTTATCAAAATATATTAGGAAGTAAGT
AGAAGCTTCCTTTTTATAGCATTTGAATTAAATAGATTTAACCAAACGAAGAAGTGTGTAAATATTGTATTCGTCCTTGA
GAACACGTGATAATTTACTACCAAATATAAGGTATGTATGGTATATAATTATGAGTCATCAATGATTGCTTGAAATATTG
GGGGATGTAAAGAACCTTCCTTAATTTGATGAAATCAAGCTGTTCGACCACAGATAGGATCGGTCGCTCGGGAAAACCCA
AAAAAATCAAAAAGAAAGAAGAGAAAGAACTGGGAGTTGGCGCCTACATAACAGGTAGCTTGCTTACCAAGCCGCCCTAC
TTTTTTCAGTTGAAGACTATCAGGCCTGGAAATGGAAACTTTGGACCCAGACAAATATTCTTATCTGCGGATCTATTCCA
TGCCGGAATTCGACCCGCTATTAATGTGGGTATTTCAGTTTCCAGAGTAGGATCCGCGGCTCCCGGGACTCTTTCATAGA
ATTCCAACAATTTCTCCCGCTCCTCAAAAGGATAAGAAATTCATGCTCACTTATACAACACAATCCAGATTTTATTCAAG
TCAAGGAATATTTTTAGGTTCTTTTCCTAGATGAAACGGCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCT
ACTAAGATGTTTCAGTTCGCCAGGTTGGGGTTCCAGAATCCGCCTATTTTACTAGTCTTCGGAAACGGAAAACCCACTAA
TTTTTTTCTAGCTATAAGTACCACGAAACAGAAACATCTCAAACAACACATGTACCAAAGAAACGACCAGCTAGCTTGCT
TCAAATCTTAAGTAATGGCGCTAACAAAAGTTGCTCTCTTCCTTGCCCTCAACATTGGTCTCATTGCTATTGTGCATGGT
AACCCTCCAATGGTTCTTGCACCACCTTTGGTGCCTACCCCACCTGTTGCACCGGCGCCGTCGATTGGTGGTTCCTGCCC
AATCAACCCACTAAAGATAACTGTGTGCAGCAATGTGTTGTTGCTACTCAAGCTCCGGATCAATGTGCCGGAGACCGAGC
AATGTTGCCCACTGCTTAGTGGGTTGGCTGATCTAGATGCCGCAGTCTGTGTTTGCACTGCCATCAAGGCCAACCTCCTT
GGCCTCATCCCCGTCGACATTCCCGTCGACCTGACCCTCCTACTCAACCATTGTAACAAGACATATCCCTCTACTTTCAC
CTGCTCACCATGAGCCATGATCAACTATACCTCTCCAAAGCATACTCATAATTGCCATGCATGTGAGGCATACCCATCTA
TGCCAGCTCATTAATAAATTTATGTTTAGAT---TCTATATTTAGATTTCGAGTTATGTTTGTGTGTTTG--ACATAAGT
GTATCATGCATGTTATGTAATCAAAATTATCAAGATGGAGCTTGTCTCATTGAAGATATT-CCCTACAACATATGAGATC
ATTATAAATAATTCAAAACGT-CATCGCAGTTGATTGTTTGAACCATCTATCTATATACGACATATTTATGAATTTTTAC
AACTGGTTCTATAGTCTATGGAAACATCTATGACATTTGGATCTTACTATGAACCATATGTTGGCAGTTATTTATCATCG
ATGGTTTAAGAGATTTC-TTTGT--TCGGTTAGATGTGTTGATTATGTTCATGTGGGGTCCAAACTCTATAAACTAGATG
ATGTCCTGCATGTTGCTACGCGATTTTGTTGTCGCGAAGATGATAACAATTGAATTCAGTTATCTGCCAAATTTTAATTA
CATTCAGTGACTATTGTATTTGTTTTATAACATGCATCACCGACACGATGATTTAAACAATTCAAAAGAAAAACAAATTG
GAAAGCCCAAGAGCTGGAATAGTTCCTGGCTTCCTGCATGAATCGTCCTTCATGGTCTGCTTTTGAACATAGTCAAAATG
GCCATATAAAATGAATAATA-GTCAA----GATCCAAATCACTCAATATAGTAACACTTTGTAAAAGGAATAATTCAGAA
TAGTGACCAATTCCATTGTTGTAGT-------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TTATAAGGTGTGCAAACTACAAAAAGATCTCGAGAATC---------------
--------------------------------------------------------------------------------
-------------------------------------TTAGTGGTC----TTAATCACATCATATGCGTCATTGTTTTTT
ATTTCCTTTTGATTAGTACAAAAATCCACCACTGTTATCACTGGCCAACCGTACAACGACATCCCTTGTAAATCACCCAG
AAAGGGTTTCCCCCCGCTTTGTATTTCAAAGCAACCACCACGATAC
>chr5D_1
TGTTTCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ACACATGTATTTGGGTTTTTT
CTATGAATCTCATATCCAAGAACTAATACACATATAACACAAAAATATAAACTTTATAATGAACATGGGAATATAATAGT
ACAAATTATTGCCTCT----AGGGCATAATTCCAACAATTACAGGTTTCCTTCTTTATCAAAATATATTAGGAAGTAAGT
AGATGCTTTCTTTTTATAGCATTTGAATTAAATAGATTTAACCAAATGAAGAAGTGTGTAAATATTGTATTTGTCCTCGA
GAACACATGATAATTTACTACCAAATATAAGGTATGTATGGTATATAATTATGAGTCATCAATGATTGCTTGACATATTG
GGGAATGTAAAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AACCCACTCA
ATTTTTTCTAGCTATAAGTACCACCAAACAGAAATATCTCAAACAACACCAATACCAAAGAAACCACCAGCTAGCTTTCT
TCAAATCTTAAGTAATGGCGCTAACAAAAGTTGCTCTTTTCCTTGCCCTCAACCTTGGTCTCATTGCTATTGTGCATGGT
AACCCTCCAATGGTTCCTACACCACCTTTGGTGCCTACCCCACCCGTTGCACCGACACCATCGAATGGTGGTTCCTGCCC
AATCAACCCACTAAAGATAACTGTGTGTAGCAATGTGTTGTTGCTACTCAAGCTCCGGATCAATGTGCCGGAGACCGAGC
AATGTTGCCCACTGCTTAGTGGGTTGGCTGATCTAGATGCCGCTGTCTGTGTTTGCACAGTCATCAAGGCCAACCTCCTT
GGCCTCATCGCCGTCGACATTCCCGTCGACCTGACCCTCCTACTCAACCATTGTAACAAGACATATCCCTCTAGTTTCAC
CTGCTCGCCATGAGCCATGATCAACTATACCTCTCCAAAACATTCTCATAATTGTCATGCATGTGAGGCATACCCATCTA
TGCCAACTCATTAATAAATTTATG-TTAGAT---TATATATTTAGATTTCAAGTTATGTTTGTGTGTGTG--ACATAAGT
GTATCATGCATGTTATGTAATCAAATTTATTGAGATGGAGCTTGTCTCATTGAAGATATT-CCCTACAACTTATGAGATC
ACTATAAATAATTCAAAATG-ACATCGCAGTTGATTGTTTGAACCATCTATCTATATACGACATATTTATGAATTTTTAC
AACCGGTTCTATAGTCTATGGAAACATCTATGACATTTGGATCTTACTATGAACCATATGTTGGCAGTTATTTATCACCG
ATGGCTTAAGAGATTTC-TTTGTTCTCGACTAGATGTGTTGAGTATGTTCATCTGGGG-CCAAAGTCTATAAACTAA-TG
ACACCCCGCGCGTTGCTGCGGGATTTTGTTGTCGCGAAGATGATAACAGTTGAAATCAGTTATATGCCAAATTTTATTTA
CATTCAGTGACTGTTGTATTTGTTTTATAACATGCATCACCGGCATGATGATTTAAACAATTCAAAAGGAAAA-AAATTG
GAAAGCCCAAGAGCTGGAATAGTTCCTGGCTTCCTACATGAATCATCCTTCATGGTCTGCTTTTGAACATAGTTAAAATG
GCCATATAAAATGAATAGTATGTCAA----GATCCAAATCACTCAATATAGTAAAACTTGGTAAAAGGAATAATTCAGAA
TAGTGACCTATTTCATTGTTGTAGTTT-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------ATTAGTTGTGCAAACTACAAAAAGATCTCGAGAATC---------------
--------------------------------------------------------------------------------
-------------------------------------TTAGTGGTCAATCTTAATCACATCATATACATCATGGTTTTTT
ATTTCCTTTTGATTAGTAGAAAAATCCACCACTGTCATCATTGGACAACCATACAACAACATCCCTTGTGAATC------
----------------------------------------------
>chr5A_1
TGTTTCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ACGCATGTATTTGGGTTTTTT
CTATGAATCTCATATCCAAGAACTAATACACTTATAAGACAAAAATATAAACTTGATAATGAACATGGAAATATAATAGT
ACAAATTATTGCCTCT----AGGGCATAATTCCGACAATTACAAGTTTCCTTCTTTATCAAAATATAATAGGAAGTAATA
AGATGCTTCCTTTTTATAGCATTTGAATTAAATAGATTTAACCAAACGAAGAAGTGTGTAAATATTGTATTCATCCTCGA
GAACACATGATAATTTACTACCAAATATAAGGTATGTATGGTATATAATTATGAGTCATCAATGATTGCTTGACATATTG
GGGAATGTAAAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AACCCACTCA
TTTTTTTCTAGCTATAAGTACCACCAAACATAAACATCTCAAACAACACAAATACCAAAGAAACCACCAGCTAGCTTGCT
TCAAATCTTAAGTAATGGCGCTAACAAAAGTTGCTCTCTTCCTTGCCCTCAACCTTGGTCTCATTTCTATTGTGCATGGT
AACCCTCCAATGGTTCCTACACCACCTTTGGTGCCTACCCCACCTATTGCACCGACACCATCGAATGGTGGTTCCTGCCC
AATCAACCCACTAAAGATAACTGTGTGCAGCAATGTATTGTTGCTACTCAAGCTCCGGATCAACGTGCCGGAGACCGAAC
AATGTTGCCCACTGCTTAGTGGGTTGGCTGATCTAGATGCCGCTGTCTGTGTTTGCACTGCCATCAAGGCCAACCTCCTT
GGCCTCATCGACATCGACATTCCCGTCGACCTGACCCTCCTACTCAACCATTGTAACAAGACATATCCCTCTAGTTTCAC
CTGCTCGCCATGAGCCATGATCAACTATACCTCTCCAAAACATTCTCATAATTGTCATGCATGTGAGGCATACTCATCTA
TGCCAACTCATTAATAAATTTATG-TTAGAT---TATATATTTAGATTTCAAGTTATGTTTGTGTGTGTG--ACATAAGT
GTATCATGCATGTTATGTAATCAAATTTATTGAGATGGAGCTTGTCTCATTGAAGATATT-TCCTACAACATATGAGATC
ATTATAAATAATTCAAAACG-ACATCGCAGCTGATCGTTTGAACCATCTATCTATATACGACATATTTATGAATTTTTAC
AACCGGTTCTATAGTCTATGGAAACATCTATGACATTTGGATCTTACTATGAACCATATGTTGACAGTTACTTATCATTG
CTGGTTTAAGAGATTTC-TTTGTTCTCGACTAGATGTGTTGATTATGTTCATGTGGGGTGCAAACTCTATAAACTAG-TG
ACATCTTGCGCGTTGCTGCGAGATTTTGTTGTCGCGAAGATGATAACAATTGAAATCAGTTATATGCCAAATTTTATTTA
CATACAGTGACTGCTGTATTTGTTTTATAACATGCATCACCGGCA-GATGATTTAAACAATTTAAAAGAAAAATAAATTG
GAAAGCCCAAGAGCTGGAATAGTTCCTGGCTTCCTGCATGAATCATCCTTCATGGTCTGTTTTTGAACATAGTTAAAATG
GCCATATAAAATGAATAATATGTCAA----GATCCAAATTACTCAATATAGTAACACTTTGTAAAAGGAATAATTCAGAA
TAGTGACCCATTTCATTGTTGTAGTTTTTTTTAACACTGTATAGACGCAAGCGCTCATATACACGCGCATACACTCATCC
CTATGAACGCACACACGTACACCCTATCCCTATAAGCACCTCCGAAAGATTGAGCCGGAATATCATCTTGAAATTTATGG
TGACTTCGTAAATTTCATTGTTGTAGTTTATTAGTTGTGCAAACTACAAAAAGATCTCGAGAATC---------------
--------------------------------------------------------------------------------
-------------------------------------TTAGTGGTC----TTAATCACATCATATACGTTATGGTTTTTT
ATTTCCTTTTGATTAGTACAAAA-TGCACCACTGTTATCACTGGACAACCGTACAACGACATCCCTTGTGAATC------
----------------------------------------------
>chr5A_1
TGTTTCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ACGCATGTATTTCGGTTTTTT
CTATGAATCTCATATACAAGAACTAATACACTTATAACACAAAAATATAAACTTGATAATGAACATGGAAATATAATAGT
ACAAATTAGTGACTCT----AGGGCATAATTCCAACAATTACAACTTTCCTTCTTTATCAAAATATAATAGGAAGTAATA
AGATGCTTCCTATTTACAACATCTGAATTAAATAGATTTAACCAAACAAAGAAGTGTGTAAATATTGTATTCGTCCTCGA
GAACACATGATAATTTACTACCAAATATAAGGTATGTATGGTATATAATTATGAGTCATCAATGATTGCTTGACATATTG
GGGAATGTAAAT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AACCCACTCA
ATTTTTTCTAGCTATAAGTACCACCAAACAGAAACATCTCAAACAACACAAATACCAAAGAAACCACCAGCTAGCTTGCT
TCAAATCTTAAGTAATGGCGCTAACAAAATTTGCTCTCTTCCTTGCCCTCAACCTTGGTCTCATTGCTATTGTGCATGGT
AACCCTCCAATGGTTCCTACACCACCTTTGGTGCCTACCCCACCTATTGCACCGACACCATCGAATGGTGGTTCCTGCCC
AATCAACCCACTAAAGATAACTGTGTGCAGCAATGTATTGTTGCTACTCAAGCTCCGGATCAACGTGCCGAAGACCGAGC
AATGTTGCCCACTGCTTAGTGGGTTGGCTGATCTTGATGCCGCTGTCTGTGTTTGCACTGCCATCAAGGCCAACCTCCTT
GGCCTCATCGACGTCGACATTCCCGTCGACCTGACCCTCCTACTCAACCATTGTAACAAGACATATCCCTCTAGTTTCAC
CTGCTCGCCATGAGCCATGATCAACTATACCTCTCCAAAACATTCTCATAATTGTCATGCATGTGAGGCATACCCATCTA
TGCCAACTCATTAATAAATTTATG-TTAGAT---TATATATGTAGATTTCAAGTTATGTTTGTGTGTGTG--ACATAAGT
GTATCATGCATGTTGTGTAATCAAATTTATTGAGATGGAGCTTGTCTCATTGAAGATATT-TCCTACAACATATGAGATC
ATTATAAATAATTCAAAACG-ACATCGCAGCTGATCGTTTGAACCATCTATCTATATACGACATATTTATGAATTTTTAC
AACCGGTTCTATAGTCTATGGAAACATCTATGACATTTGGATCTTACTATGAACCATATGTTGACAGATACTTATCAGTG
ATGGTTTAAGAGATTTC-TTTGTTCTCGACTAGATGTGTTGATTATGTTCATGTGGGGTCCAAACTCTATAAACTAG-TG
ACACCCTGCGCGTTGTTGCGAGATTTTGTTGTCACGAAGATGATAACAATTGAAATCAGTTATATGCCAAATTTTATTTA
AA-ACAGTGACTGCTGTATTTGTTTTCTAACATGCATCACCGGCA-GATGATTTAAACAATTTAAAAGAAAAATAAACTG
GAAAGCCCAAGAGCTGGAATAGTTCCTGGCTTCCTGCATGAATCGTCCTTCATGGTCTATTTTTGAACATAGTTAAAATG
GCCATATAAAATGAATAATATGTCAA----GATCCAAATTACTCAATATAGTAACACTTTGTAAAAGGAATAATTCAGAA
TAGTGACCCATTTCATTGTTGTAGTTTTTTTTAACACAGTACACACACAAGCGCTCATATACACGCGCATACACTCACCC
CTATGAACACACACACGCACACCCTATCCCTATGAGCACCTCCGAAAGATTGAGCCAGCATATCATCTTGAAATTTACGG
TGACTTCGTAAATTTCATTGTTGTAGTTTATTAGTTGTGCAAACTACAAAAAGATCTCGAGAATC---------------
--------------------------------------------------------------------------------
-------------------------------------TTAGTGGTC----TTAATCACATCATATACGTCATGATTTTTT
ATTTCCTTTTGATTAGTAAAAAA-TGCACCACTGTTATCACTGGACAACCATACAACGACATCCCTTGTGAATC------
----------------------------------------------
>chr5B_3
CATGTATGTGAGCCATACCCTTCTATGCCAGCTCATTAATAAATTTATGTTTAGATTATACATAATTAGCTTTCGAGTTA
TGTTTGTGTGTGTGCGTGACACAAGTGCATCATGTTATGTAATCTAAATTATTGTGATGGAGATCGTGTCATTGAGGATA
TTTCGGTAAGAATGTTTCTCATTACTGATAGCATCCATTTTATAATAACAATGCTCATGATAAGGAAAACAAGATCATCA
TCAATACATGAGCAAGTCTTAGAGGCATGACTAGGGATCACATTGGTGTTTATATTTCCACGCATGTATTTGGGTTTTT-
CTATGAATCTCATATCTGAGAACTAATATACTTATAGAACAAAAATATAAACTTGATAATGAACATGGAAATATAATAAT
AAAAATAATTGCCTCT----AGGACATAATTCCGACAATTACAGGTTTCCTTGTTTATCAAAATATATTAGGAAGTAAGT
AGAAGCTTCCTTTTTATAGCATTTGAATTAAATAGATTTAACCAAACGAAGAAGTGTGTAAATATTGTATTCGTCCTTGA
GAACACGTGATAATTTACTACCAACTATAAGGTATGTATGGTATATAATTATGAGTCATCAATGATTGCTTGACATATTG
GGGGATGTAAAG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AACCCACTAA
TTTTTTTCTAGCTATAAGTACCACGAAAAAGAAACATCTCAAACAACACATGTACCAAAGAAACCACCAGCTAGCTTGCT
TCAAATCTTAAGTAATGGCGCTAACAAAAGTTGCTCTCTTCCTTGCCCTCAACCTTGGTCG--------TTGTGCATGGT
AACCCTCCAATGGTTCCTGCACCACCTTTGGTGCCTACCCCACCTGTTGCACCGGCACCATCGATTGGTGGTTCCTGCCC
AATCAACCCACTAAAGATAACTGTCTGCAGCAATGTGTTGTTGCTACTCAAGCTCCGGATCAACATGCCGGAGACCGAGC
AATGTTGCCCACTGCTTAGTGGGTTGGCTGATCTAGATGCCGTTGTTTGTGTTTGCACTGCCATCAAGGCCAACCTCCTC
GGCATCATCACCGTCGACATTCCCGTCGACCTGGCCCTCCTACTCAACCATTGTAACAAGACATATCCCTCTACTTTCAC
CTGCTCGCCATGAGCCATGATCAACTATACCTCTCCAAAACATACTCATAATTGCCATGCATGTGAGGCATACCCATCTA
TGCCAACTCATTAATAAATTTATGTTTAGAT---TATATATTTAGATTTCAAGTTATGTTTGTGTGTTTG--ACATAAGT
GTATTATGCATGTTATGTACTCAAAATTATTGATATGGAGCTTGTCTCATTGAAGATATT-CCCTACAACATATGAGATC
ATTATAAATAATTCAAAGCG-ACATCGCAGTTGGTTGTTTGAACCATCTATCTATATACGACATATTTATGAATTTTTAC
AACCGGTTCTATAGTCTATGGAAACATCTATGACATTTGGATCTTACTATGAACCATATGTTGGCAGTTATTTATCATCG
AAGGTTTAAGAGATTTC-TTTGTTCTCGGCTAGATGTGTTGATTATGTTCATGTGGGGTCCAACCTCTATAAACTAGATG
ACGCCCCGCACTTTGCTGCGGGATTTTGTTGTCGCGAAGATGATAACAATTGAAATTAGTTATATGCCAAATTTTATTTA
CATTCAGTGACTGTTGTATTTGTTTTATAACATGCATCACCGGCACGATGATTTAAACAATTGAAAAGAAAAAT-AATTG
GAAAGCCCAAGAGCTGGAATAGTTCCTGGATTCCCGCATGAATCATCCTTCATACTCTGCTTTTGAACATAGTCAAAATG
GCCATATAAAATGAATAATATGTCAATTGTGATCCAAATCACTCAATATAGTAACACTTTGTAGAAGGATTAGTTCAGAA
TAGTGACCCATTTCATTGTTGTG---------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GTTTATTAGTTGTGCAAACTACAAAAAGATCTCGAGAATCTTAGGCCCTGTTTGG
AGTCACTCAGCTCCTAAAAATACGCGGAGCTGCGGAGCATCTGTTTTCCCAGCTCCATGCTTTTTAACTTTAGCTCTTGG
AGCGGAGTGGTGGAGTGACGGGGCGCCGAACAGGGCCTTAGTGGTC----TTAATCACATCATATACGCCATGGTTTTTT
ATTTCCTTTTGATTAGTACAAAA-TCCACCACTGTTATCACTGGACAACCTTACAACGACATTCCTTGTGAATC------
----------------------------------------------
>chr5B_911
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TTTCTAGCTATAAGAACCACCAAATAGAAACATCTCAAACAACACCTCTAGCAAAGAAACCACTTGCTAGCTTGCT
-CAAAGATTAAGT-ATGGCACTAACAAAGGTCGCCCTCTCCTTTGCCCTAAACCTTGTTCTCATTGCCATTGTGCATGGT
CACCCACCAGTTGTCCCTTCACCGCCTTTGGTGCCTACCCCAGTTGTTGCACCAACTCCACCGAATGGTGCTTCCTGCCC
AATCAACCCACTGAAGATAACTGTGTGCAGCAATGTGTTGCTGCTACTCAAACTCCGGATCAACGTGCCGGAGACTGAGC
AATGTTGCCCACTGCTTAGTGGGTTGGCTGATCTTGATGCCGCCATCTGTGTCTGCACTGTCATCAAGGCCAACCTCCTT
GGACTCGTCACCGTTGACATTCCCGTCGACCTTACCCTCCTACTAAACCATTGTAACAAGACATGTCCCTCTAGTTTCAC
CTGCTCTCGATGAGCCAGGACCAAGTATACCTCTGCAAAACATACTCATAATTATCATGTATGTGAGGCATACCTATCTA
TGTCATCTCATTAATAAATTTTGTGTTTACATTATATTTGTTTAGTTTTCAAGTTATGTTGGTGTGTGTGTGACATAAGT
GTATCATGTTATC----TAATCCAAATTATTGCGACGGATTTTGTGTCATTGAAGATATTCCCCTACAACATATAAGATC
ATTATAAATAATTCATAAATTACATCGTTGTCAATTGTTTAAACCATCCATCTAGATACGACATATTAATGATTTTTTCA
CAA------------CTATGGAAACATCTATGATATCTTGCTCTTACTATGAACCATCTGCTGACAGTCATTTATTAT--
ATGGTCCAAGAGATTTC-TTTGTTCTCAAATATATGTGTTGATTCTGTTCATGTGGCCTCCAAAC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5D_911
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TTTCTAGCTATAAGAACCACCAAATAGAAACATCTCAAACAACACCTCAACCAAAGAAACCACTAGCTAGCTTGCT
-CAAAGATTAAGT-ATGGCGCTAACAAAGGTTGCCCTCTTCTTTGCCCTAAACTTTGTTCTCATTGCCATTGTGCATGGT
CACCCACCAATTGTCCCTACACCGCCTTTGGTGCCTACCCTAGTTGTTGCACTAACTCCGTCGAATGGTGGTTCCTGCCC
AATAAACCCACTGAAGATAACTGTGTGCAGCAATGTGTTGCTGCTGCTCAAGCTCCGGATCAACGTGCCAGAGACCGAGC
AATGTTGCCCATTGCTTAGTGGGTTGGCTGATCTTGATGCCGCCGTCTGCATCTGCACTGCCATCAAGGCCAACCTCCTT
GGAATCATCAACATTGACATTCCCGTCGACCTTACCCTGCTACTAAACCATTGTAACAAGACATATCCCTCTAGTTTCAC
CTGCTCGCAATGAGTTATGACCAACTATACCTCCCGAAAACATACTCATC---ATCATGTATGTGAGGCATACCTATCTA
TGCCAACTCATTAATAAATTTTGTGTTTAAATTATATTTGTTTAGTTTTCAAGTTATGTTTGTGTGTGTG--ACATAAGT
GTATCATGTTATC----TAATCCAAGTTATTGAGATGGATCTCGTGTCATTGAAGATATTACCCTACAACATATGAGATC
ATTATAAATAATTCATAAATTACATCGTAGTCAATTGTTTGAACCATCCATCTAGATACGACATATTAATGATTTTTTAG
AACT-------------ATAAAAATATCTATTATATCTTGCTCTTACTAGGAACCATCTGATGGTAGTCATTCATCAT--
ATGGTTCAACAGATTTGTTTTGTTCTCAACTAGATGTGTTCATTTTGTTCATGTGGCCTCCAAAC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5D_911
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TTTCTAGCTATAAGAACCACCAAATAGAAACATCTCAAACAACACCTCTACTAAAGAAACCACTAGCTAGCTTGCT
-CAAAGATTAAGT-ATAGCGCTAACAAAGGTT-CCCTCTTCTTTGCCCTAAACCTTGTTCTCATTGCCATTGTGCATGGT
CACCCACCAATTGTCCTTACACCGCCTTTGGTGCCTACCCCATTTGTTGCACCAAGTCTGTCGAATGGTCATTCCTGCCC
AATCAACCCACTTAAGATAAATGTGTGCAGCAATGTGTTGCTGCTACTCAAGCTCCGGATCAACGTGCCGGAGACCGAGA
AATGTTGCCCATTGCTTAGTGGGTTGGGTGATCTTGATGCCGCCGTCTGCGTCTGCACTGGTATCAAGGCCAACATCCTT
GGAATCATCAACATTGACATTCCCGTCGACCTTACCCTCCTACTAAACCATTGTAACAAGACATATCCCTCTAGTTTCAC
TTACTCGCAATGAGCTATGACCAACTATACCTCCC-AAAACATACTCATA---ATCATGTATGTGAGGCATACCTATCTA
TGCCAACTCATTAATAAATTTTGTGTTTAAATTATATTTGTTTAGTTTTCAAGTTATGTTTGTGTGTGTG--A-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-----------------S--S------------------------S----------------------------
-S--------------SSSS-----------------------S------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
----------------------------------------------------------------S---------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
---------S----------------------------------------------------------------------
------S--------------------------------S----------------------------------------
-----S-----------------------------S--------------S-----------------------------
------------------------------SS------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-S--------S------S--S---------------------------------S--------S------------S---
------------S-----------------------------S------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S---S-------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S--S---------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S------S-------
--------------------------------------------S------------------------S----SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1099
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CGCTACTACGGGAATCGCTT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>reverse_2925
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CCAACCGTACAACGACATCC----------------
----------------------------------------------
