>input_sequence_81515
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-----------------------------------------------ATGTTCCACAAAAATGTGGCTCAATCCGCAGCT
TGCCCTCGATGTCAAGACACGTATGAGGATGCTCTTCATCTCATCTCCACCTGCTCCGTTGCTACACAAGTTTGGTCCAG
CTTGGGCCTGTCTGCTCC-GACCTCCCTCACTGCTCTTCACCAACACCCACCGATTTT-GGGCCTCAACCCCAACATATG
GCCACCGGTGGCCTTGACCATAACTTGGAAGTTATGGGACTCAAGAAATGCTCTCGTCTTCAGGAACGAAGATCACTCTC
ACAGAATAACGCTAAGAAATATTGTAGATGACT--TCTCGCTCTGGGTCTTCCGGTTCAAAAAAAC-TTATGACAGCAAC
TCGGCTAGACAGTGGCTAAATTTTCTCTCATCCGCAGTCCCTTCT-AGGTGA----------------------------
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>chr4A_1_TraesCS4A01G170400
CACAGATGACCTCATCCAAAATAATATCGCTGCAACT-ATTGGATGTGATCTCTCCTCTTTCCCATTAATCTACCTAGGC
CTCCCTCTCTCCCCTACCAAACTACCACTCTCAGCTTTCGACCCTATCTTAGATAGCTTTCGAAAGCTACTTTTCGGTTG
GGTTGCGCGTCTACTCTCACGTGGAGCAAGACTAACCTTGCTCACTGTTGTCCTCGATTCCTTAACTATTTACTTCATGT
CCGTTTTTTGCCTTCCAAAGTCTATCCTAGTTAAGCTCGACGCCATTCAGAGAGATTTCTTCTGGTCAAACGTGGAAACT
TGCATGGGTGCGAAGTGTCTGGTCGCGTGGAAAAACATTTGCAAGCCTAAAGAACTTGGTGGTCTAGGCATTAAGAATCT
TGCAATTCAGAACCGCTGCCTGCTTATGAAATTTTCTTTTGAAATTTTGCAACACCCAAATATCCCCTGGACACAGTGGT
ATCACCACCAATTCCCACTTGGGATTGCAACAAAAACTCCTAGGACCTCTCTCCTTTGGAAGATTATAAACAAAAACCTA
CCTCTCCTAATTGAGCACTCCTTCGTGATCACATACAACGGCCTCTCCACCTTCTTTTGGCTAGATAAATGGCTTCTTGA
ATCACCTCTTCACAAAGTTTTACCTCACCTATATTCCCACTCCATAGATGACAAGGTCCTAGTGTCCACCATTTGGCAAA
CCAGCTTATTATAGAACCTGCGGAACCGTCTTACTAATGTTGCTGCTCGCGAGTTGGACTGCGTGTTGT---TGTTGTTG
CAGGATTTCCAGCAGGTGGACCCACCAGAAGAGCGGTCCCTCACACATGGGCTTGCTTTCTCTGCCAAGAATGCTTACTC
TTCCATTGTTGCTGATGACTCCTACGATCCACACCATGATTTTGTTTGGGCCTCTAAGGTTCCGATCAAAGTCAAGATCT
TCGCTTGGCTTCTCCTCC---GCGATTGGCTAAATACGAAGGCCAACATGTTCCACAAAAATGTGGCTCAATCCGCAGCT
TGCCCTCGATGTCAAGACACGTATGAGGATGCTCTTCATCTCATCTCCACCTGCTCCGTTGCTACACAAGTTTGGTCCAG
CTTGGGCCTGTCTGCTCC-GACCTCCCTCACTGCTCTTCACCAACACCCACCGATTTT-GGGCCTCAACCCCAACATATG
GCCACCGGTGGCCTTGACCATAACTTGGAAGTTATGGGACTCAAGAAATGCTCTCGTCTTCAGGAACGAAGATCACTCTC
ACAGAATAACGCTAAGAAATATTGTAGATGACT--TCTCGCTCTGGGTCTTCCGGTTCAAAAAAAC-TTATGACAGCAAC
TCGGCTAGACAGTGGCTAAATTTTCTCTCATCCGCAGTCCCTTCT-AGGTGAACTTGTAACAATAACTTGCCTGTATTCC
CCTGAA-CTC--TTTGAGTGGTAATATATTCAGGTGGCGAAGCTCTCCGCCC-------GGTGACCGTTCAAAAAAACGT
TGCTACTACATTGCTACTGGGCCTTATTTTGAGACTTATCACTAGCCAGATTGATCGAAGTCGAGGAGATAACTCGACCA
GGAGCCACCAGTGCATGACGCATGCATTTGCCATCTAGAAGACAGATCGCCAACGACGGCATGCGCAATTAGCCCATCGT
CTAATTGACTGATTGTTCTTTGTGAGCATTTAATCTTGATTTCTTTGAATTATTATTCAAGAATAGAGGATTATCTTTGT
TCCTT-ATTTTTTCCATTCATCTATTGCAGCATCCAGTCAATTTTATGGATGGTTTGTATTGGCTCTGTACTATAAAACT
TGTGAAGAACTGCAAGAAAAATAAGGCGAAGTTTATGCACCTAAATTTCTAAAATATGAAAATTCAAATTTA--------
--CACCATGCCATCATCACTATCCAACATGTTTTTC---ATGTGTATAGGTGTGAAC-----------------------
--------AATGAAGAACAAATATGGTGATTTGAAGCATTTGTGGGGGAGAGCTTCAAAGGCGCCGAACATAAGTTCGAC
ATCAACACCAACACCGGTATCTATCGACTTTGAAAACCAAGTGA---ATCAAAATAAGAGCAACCACCATCCGACGAGCT
ACAGTTGGCACTAGTATAGCCAG------------GTAATAATTTATAGTTTCGTTGTTATTATTATGAACATTTTTATG
TATTACATTGTTGTGCAAAAAAACATT---TTTTACTCCGCATACCCATGTCGGAAATCCTGTCTCCGCCACTACAGCCA
AGGTCTCCTCCTCATCACTGGACGAGGAATCGTCGGAGTCGCAAAGAAAATTGTGAAAAAAGAACTCGTCGACGGAATCC
ATTTTGTACCTTGGCAAACTATCGAACAACTTGCGGGCGTCGACAAATGAGACGACGGGCGAGCGTGCCGTCGTCCGACG
AGCAT
>chr4A_1
CACAGATGACCTCATCCAAAATAACATCGCTGCAACCCATTGGATGTAAGCTCTCCTCCTTCCCGTTAATCTACCTAGGC
CTCCCTCTTTCCCCTACCAAACTACCACTCTCAGCTTTTGACCCTATCTTAGATAGCTTTCGAAAACTCCTTTTTGGTTG
GGTCGCGCGTCTGCTCTCACGTGGAGCAAGACTAACCTTGCTCTCTGCTGTCCTCGATTCCTTAACTATTTACTTCATGT
CCGTTTTCCGCCTACCGAAGTCTATCCTAGTTAAGCTCGACACCATCCGGAGAGCTTTCTTCTGGTCCAACGAAGAAACT
TGCACTGGTGCAAAGTGTCTGGTCGCGTGGAAAAACGTTTGCAGGCCTAAGGAACTTGGTGGTCTAGGCATTAAAAATCT
TGAAATTCAGAACCGCTGCCTGCTTATGAAATTTTCTTTCAAAATTTTGCAACACCCAAACATCCCCTGGACCCAGTGGT
ATCATCACCAATATCCACTTGGGATTGCAACAAAAACTCCTAGGCCCTCTTTCCTTTGGAAGATTATAAACAAAAACCTA
CCTCTCCTAATTGAGCACTCCTTCGTGATCACCTACAACGGCTTCTCCACCTTCTTTTGGCTAGATAAATGGATTCTTGA
ATCACCTCTACAAAAAGTTTCCCCCCACCTATACT-CCACTCCATAGATGACAAGGTTCTAGTGGCTACACTTTAGCAAA
CCAGCTTATTATCGAACCTGCGGAACCGTCTTACTAATGCTGCTGCTCGAGAGTTGGACTGTGTGTTGT---TGTTGTTG
CAGGATTTCCAGCAGGTGGACCGACCAGACGAGCAGTCCCTCACACATGGGCTTCCTTTCTCTGCCAAGAACGCTTACTC
TTCCATTGTTGCTGATGACTCCTTCAATCCACACCATGATTTTGTTTGGGCCTCTAAGGTTCCGATCAAAGTCAAAATTT
TCGCTTGGCTTCTCCTCC---GCGATCGGCTAAATACGAAGGCCAACATGTTTCACAAAAATGTGGCTCAATCCGCAGCT
TGCCCTCGATGTCAAGACCCGTATGAGGATGCTCTTCATCTCATTTCCACCTGCTCCTTTGCTACACAAGTTTGGTCCAG
CTTGGGCCTGTCTGCTCC-GACCTCCCTCACTGCTCTTCCCCAACACCCACCGATTCA-GGGCTTCAACCCCAACATCTG
GCCATCGGTGGCCTTGACCATAACTTGGAAGCTCTGTGACTCAAGAAATGCTCTCGTGTTCAGGAACGATGATCACTCTC
ACAGATTAACGCTAAGAAATATTGTAGCAGACT--TCTCTCTCTGGGTCTTACGGTTAAAAAAAAC-TGATGACAGCAAC
TCGGCTAGACAGTGGCTAAATTTTCTCTCCTCTGCAATCCCTTCT-AGCTGAACTTGTAACAATAATTTGCCTGTATTCC
CCTGAA-CTC--TTTGAGTGGTAATATATTCAGGTGGGGAAGCTCTCCCCCC------CGTTGACTGTTCAAAAAAA---
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>chr6D_1
CACAGATGACCTCACCC-AAACAACATCGCTGCAACT-ATTGGATGCAATCTCTCCTCCTTCCCGTTAATCTACCTAGGC
CTCCCTCTCTCCCCTATCAAACTACCACTCTCAGCTTTCGACCCTATACTAGATAGCTTTCGAAAACTCCTTTTCGGTTG
GGTTGCGCGTCTGCTCTCTCGTGGAGCAAGACTAACCTTGCTCACTGCTGTCCTCGATTCCTTAACTATTTACTTCATGT
CCGTTTTTCGCCTACCGAAGTCTATCCTAGTTAAGCTAGACGCCATCCGGAGAGCTTTTTTCTGGTCCAACGAAGAAACT
TGCACGGGTGCAAAGTGTCTGGTCGCGTGGAAAAACGTTTGCAAGCCTAAAGAACTAGGTGGTCTAGGCATTAAAAATCT
TGAAATTCAGAACCGCTGCCTACTTATGAAATTTTCCTTCAAAATTTTGCAACACCCAAACATCCCCTGGACCCAGTGGT
ATCATCAACAATATCCACTTGGGATTGCAACAAAAACCCCTAGGCCTTCTTTCCTTTGGAAGATTATAAACAAAAACCTG
CCTCTCCTAATTGAGCACTCCTTCGTGATTACCTACAACGGCCTCTCCACTTTCTTTTGGCTAGATAAATGGCTTCTTGA
CTCACCTCTACAAAAAGTTTTCCCCCACCTATACTCCCACTCCATAGATGACAAGGTTCTAGTGGCTACAGTTTGGCAAA
CCAGCTTATTATCGAACCTGCGGAACCGTCTTACTAATGCTGCTGCTCGAGAGTTGGACTGTCTGTTGT---TGTTGTTG
CAGGATTTCCAGCAGGTGGACCGACCAGACGAGCGGTCCCTCACGCATGGGCTTGCTTTCTCTGCCAAGAATGCTTACTC
TTCCATTGTTGCTGATGACCCCTTCGATCCACACCATGATTTTGTTTGGGCCTCTAAGGTTCCGATCAAAGTCAAGATTT
TCGCTTGGCTTCTCCA------CGATCGGCTAAATACGAAGGCCAACATGTTTCACAAAAATGTGGCTCAATCCGCAGCG
TGCCCTCGATGTCAAGACCCATATGAGGATGCTCTTCATCTCATCTCCACCTGCTCCTATGCTACACAAGTTTGGTCCAG
CATGGGCCTGTCTGCTCCCGACATCTCTCACTGCTCTTCACCAACACCCACCGATTCAGGGGCCTCAACCCCAACATCTG
GCCATCGGTGGCCCTCACCATAACTTGGAAGCTCTGGGACTCAAGAAATGCTCTCGTGTTCAGGAACGAGGGTCACTCTC
ACAGATTAACGCTAAGAAATATTGTAGCAGACT--TCTCTCTCTGGGTTTTCCGGTTCAAAAAATC-TGAGGACAGTGGT
TCGGCTAGACAGTGGCTAAATTTTCTCTCCTCTGCAATTCCCTCC-AGCTGAACTTGTAACAATAACTTGCCTGTATTCC
CCTGAA-CCC--TTTGAGTGGTAATATATTCAGGTGGGGAAGCTCTCCCCCC-------GGTGACCGTTCAAAAAAA---
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>chr6D_1
CACAGATGACCTCACCCAAAACAACATCGCTGCAACT-ATTGGATGCAATCTCTCCTCCTTCCCGTTAATCTACCTAGGC
CTCCCTCTCTCCCCTCTCAAACTACCACTCTCAGCTTTCGACCCTATACTAGATAGCTTTCGAAAACTCCTTTTCGGATG
GGTTGCGCGTTTGCTCTCTCGTGGAGCAAGACTAACCTTGCTCACTGCTGTCCTCGATTCCTTAACTATTTACTTCATGT
CCGTTTTTCGCCTACCGAAGTCTATCCTAGTTAAGCTAGATGCCATCCGGAGTGCTTTTTTCTGGTCCAACGAAGAAACT
TGCACGGGTGCAAAGTGTCTGGTCGCGTGGAAAAACGTTTGCAGGCCTAAAGAACTGGGTGGTCTAGGCATTAAAAATCT
TGAAATTCAGAACCGCTGCCTACTTATGAAATTTTCCTTCAAAATTTTGCAACACCCAAACATCCCCTAGACCCAGTGGT
ATCATCAACAATACCCACTTGGGATTGCAACAAAAACCCCTAGGCCTTCTTTCCTTTGGAAGATTATAAACAAAAACTTG
CCTCTCCTAATTGAGCACTCCTTCGTGATTACCTACAACGGCCTCTCCACTTTCTTTTGGCTAGATAAATGGCTTCTTGA
CTCACCTCTACAAAAAGCTTTCCCCCACCTATACTCCCACTCCATAGATGACAAGGTTCTAGTGGCTACAGTTTGGCAAA
CCAGCTTATTATCGAACCTGCCGAACCGTCTTACTAATGCTGCTGCTCGAGAGTTGGACTGTCTGTTGT---TGTTGTTG
CAGGATTTCCAGCAGGTCGACCGTCCAGACGAGCGGTCCCTCACGCATGGGCTTGCTTTCTCTGCCAAGCACGCTTACTC
TTCCATTGTTGCTGATGACTCCTTCGATCCCCTCCATGATTTTGTTTGGGCCTCTAAGGTTCCGATCAAAGTCGAGATTT
TCGCTTGGCTTCTCCTCC---GCGATCGGCTAAATACGAAGGCCAACATGTTTCACAAAAATGTGGCTCAATCCGCAGTG
TGCCCTCGATGTCAAGACCCATATGAGGATGCTCTTCACCTCATCTCCACCTGCTCCTATGCTACACAAGTTTGGTCCAG
CATGGGCCTGTCTGCTCC-GACATCTCCCACTGCTCTTCACCAACACCCACCGATTCAG-GGCCTCAACCCCAACATCTG
GCCATCGGTGGCCCTCACCATAACTTGGAAGCTCTGGGACTCAAGAAATGCTCTCGTGTTCAGGAACGAGGACCACTCTC
ACAGATTAACGCTAAGAAATATTGTAGCAGACT--TCTCTCTCTGGGTTTTCCGGTTCAAAAAAAAATGAGGACAGGGCT
TCGGCTAGACAGTGGCTAAATTTTCTCTCCTCTGCAATTCCCTCC-AGCTGAACTTGTAAC-------------------
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>chr7D_1
CACAGATGACCTCACCCAAAACAACATCGCTGCAACT-ATTGGATGCAATCT---CTCCTTCCCGTTAATCTACCTGGGC
CTCCCTCCCTCCCCTCTCAAACTACCACTCTCAGCTTTCGACCCTATACTAGATAGCTTTCGAAAACTCCTTTTCGGATG
GGTTGCGCGTCTACTCTCTCGTGGAGCAAGACTAACCTTGCTCACTGCTGTCCTCGATTCCTTAACTATTTACTTCATGT
CCGTTTTTCGCCTACCGAAGTCTATCCTAGTTAAGCTAGATGCCATCCGGAGAGCTTTTTTCTGGTCCAACGAAGAAACT
TGCACGGGTGCAAAGTGTCTGGTCGCGTGGAAAAACGTTTGCAGGCCTAAAGAACTGGGTGGTCTAGGCATTAAAAATCT
TGAAATTCAGAACCGCTGCCTACTTATGAAATTTTCCTTCAAAATTTTGCAACACCCAAACATCCCCTGGACCCAGTGGT
ATCATCAACAATACCCACTTGGGATTGCAACAAAAACCCCTAGGCCTTCTTTCCTTTGGAAGATTATAAACAAAAACCTG
CCTCTCCTAATTGAGCACTCCTTCGTGATTACCTACAACGGCCTCTCCACTTTCTTTTGGCTAGATAAATGGCTTCTTGA
CTCACCTCTACAAAAAGCTTTCCCCCACCTATACTCCCACTCCATAGATGACAAGGTTCTAGTGGCTACAGTTTGGCAAA
CCAGCTTATTATCGAACCTGCGGAACCGTCTTACTAATGCTGCTGCTCGAGAGTTGGACTGTCTGTTGTTGTTGTTGTTG
CAGGATTTCCAGCAGGTCGACCGTCCAGACGAGCGGTCCCTCACGCATGGGCTTGCTTTCTCTGCCAAGCACGCTTACTC
TTCCATTGTTGCTGATGACTCCTTCGATCCCCACCATGATTTTGTTTGGGCCTCTAAGGTTCCGATCAAAGTCAAGATTT
TCGCTTGGCTTCTCCTCC---GCGATCGGCTAAATACGAAGGCCAACATGTTTCACAAAAATGTGGCTCAATCCGCAGTG
TGCCCTCGATGTCAAGACCCATATGAGGATGCTCTTCACCTCATCTCCACCTGCTCCTATGCTACACAAGTTTGGTCCAG
CATGGGCCTGTCTGCTCC-GACATCTCTCACTGCTCTTCACCAACACCCACCGATTCAG-GGCCTCAACCCCAACATCTG
GCCATCGGTGGCCCTCACCATAACTTGGAAGCTCTGGGACTCAAGAAATGCTCTCGTGTTCAGGAACGAGGACCACTCTC
ACAGATTAACGCTAAGAAATATTGTAGCAGACT--TCTCTCTCTGGGTTTTCCGGTTCAAAAAAAA-TGAGGACAGGGCT
TCGGCTAGACAGTGGCTAATTTTTCTCTCCTCTGCAATTCCCTCC-AGCTGAACTTGTAACAATAACTTGCCTGTATTCC
CCTGAA-CCC--TTTGAGTGGTAATATATTCAGGTGGGGAAGCTCTCCCCCC------CGGTGACCGTTCAAAAAAA---
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>chr1D_1
CACAGATGACCTCACCCAAAACAACATCGCTGCAACT-ATTGGATGCAATCTCTCCTCCTTCCCGTTAATCTACCTAGGC
CTCCCTCTCTCCCCTATCAAACTGCCACTCTCGGCTTTCGACCCTATACTAGATAGCTTTCGGAAACTCCTTTTCGGTTG
GGTTGCGCGTCTGCTCTCTCGTGGAGCAAGACTAACCTTGCTCACTGCTGTCCTCGATTCCTTAACTATTTACTTCATGT
CCGTTTTTCGCCTACCGAAGTCTATCCTAGTTAAGCTAGACGCCATCCGGAGAGCTTTTTTCTGGTCCAACGAAGAAACT
TGCACGGGTGCAAAGTGTCTGGTCGCGTGGAAAAACGTTTGCAGGCCTAAAGAACTGGGTGGTCTAGGCATTAAAAATCT
TGAAATTCAGAACCGCTGCCTACTTATGAAATTTTCCTTCAAAATTTTGCAACACCCAAACATCCCCTGGACCCAGTGGT
ATCATCAACAATATCCACTTGGGATTGCAACAAAAAACCCTAGGCCTTCTTTCCTTTGGAAGATTATAAACAAAAACCTG
CCTCTCCTAATTGAGCACTCCTTCGTGATTACCTACAACGGCCTCTCCACCTTCTTTTGGCTAGATAAATGGCTTCTTGA
CTCACCTCTACAAAAAGTTTTCCCCCAACTATACTCCCACTCCATAGATGACAAGGTTCTAGTGGCTATAGTTTGGCAAA
CCAGCTTATTATCGAACCTGCGAAACCGTCTTACTAATGCTGCTGCTCGAGAGTTGGACTGTCTGTTGT---TGTTGTTG
CAGGATTTCCAGCAGGTGGACCGACCAGACGAGTGGTCCCTCACGCATGGGCTTGCTTTCTCTGCCAAGAACGCTTACTC
TTCCATTGTTGCTGATGACTCCTTCGATCCACACCATGATTTTGTTTGGGCCTCTAAGGTTCCGATCAAAGTCAAGATTT
TCGCTTGGCTTCTCCTTC---GCGATCGGCTAAATACGAAGGCCAACATGTTTCACAAAAATGTGGCTCAATCCGCAGCG
TGCCCTCGATGTCAAGACCCATATGAGGATGCTCTTCATCTCATCTCCACCTGCTCCTATGCTACACAAGTTTGGTCCAG
CATGGGCCTGTCTGCTCC-GACATCTCTCACTGCTCTTCACCAACACCCACCGATTCAG-GGCCTCAACCCTAACATCTG
GCCATCGGTGGCCCTCACCATAACTTGGAAGCTCTGGGACTCAAGAAATGCTCTCGTGTTCAGGAATGAGGATCACTCTC
ACAGATTAACGCTAAGAAATATTGTAGCAGACTTCTCTCTCTCTGGGTTTTCTGGTTCAAAAAAAACTGAGGACAGTGGT
TCGGCTAGACAGTGGCTAAATTTTCTCTCCTCTGTAATTCCCTCC-AGCTGAACTTGTAACAATAACTTGCCTGTATTCC
CCTAAA-CCC--TTTGAGTGGTAATATATTCAGGTGGGGAAGCTCTCCCCCCCCCCCCCGGTGACCGTTCAAAAAAAC--
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>chr1D_1
CACAGATACCCCCACCCAAAACGACATCGCTGCAACT-CTTGGATGTAATTTCTCCTCCTTCCCATTAATCTACCTAGGC
CTCCCCCTCTCCCCTACCAAACCACCCCTCTCAGCTTTCGACCCTATCTTAGATAACTTTCGAAAATTCCTCTTGGGCTA
GGTAGCGCGCTTGCTCTCCCGCGGAGCCAGACTAACTTTACTGACCTCGGTCCTAGATTCTCTAACTGTTTATTTCATGT
CCGTTTTCCGGCTCCCTAAGTCTATCCTTGTCAAACTCGACGCTATTCGAAGAGCCTTCTTCTGGTCTAACGAGGAAACC
TGCACGGATGCGAAGTGTCTGGTTGCGTGGAAAAACGTTTGCAAACCTAAAGAAGTTGGTGGTCTAGGCATTAAAAATCT
TGAACTTCAAAACCCCTGCCTGCTTATGAAATTTTCCTTCAAAATTCTGCAACACCCGAACATCCCTTGGACACAGTGGT
ATCATCACCAATATCCTCTTGGCATTGCAACAAAAACTCCTAGGCCCTCCTTTCTGTGGAAAATAAAATAAAAAAAACTA
CCTCTCCTAATTGAGCACTCCTTTGTGATCACATACAATGGCCTCTCCACCTTCTTTTGGCTTGACAAATGGATTCTTGA
ATCACCTCTACAAAAAGTTTCCCCCCACCTTTTCTCACACTCCATAGATGACAAGGTTCTAGTGGCTACAGTTTGGCAAA
CCAGCTTATTATCGAACCTTCGGAGCCGTCTTACTAATGCTGCTGCTCGAGAGTTGGACTGTGTGTTGT---TGCTGCTG
CAGGATTTCCAACAGGTGGACTGACCTGACGAGCGGTCCCTCACGCATGGGCTGTCATTCTCAGCCAAGAACGCATACTC
TTCCATTGTTGCTGACGACTCCTTCGACCCACACGATGATTTTGTTTGGGCTTCCAAGGTCCTGATCAAAGTCAAGATCT
TCGCATGGCTTC---TCCTTCGGGACCGGCTAAATACGAAGGCCAACATGTTTCATAAAAATGTTGCTCAATCCGCTGCT
TGTCCAAGATGTCAAGACCCGTATGAGGATGCTCTCCACCTCATCTCTACCTACTCATACGCAACACAAGTTTGGTCTAG
TGTGGGCCTGTCTGCCCC-AGTCTCCCTCACTGCTCTTCACCAACACCCGCCGATTCAG-GGCCTCAACCCGAACATCTG
GCCATCGGTGGCCTTGACAGTTTCTTGGAAACTATGGGACTCGAGAAATGCTCTAGTATTCAGGAACGAAGACCACTCCC
TCAGAACAACTCTAAGAAATATTGTAGCAGACT--TCTCTCTCTGGGTTTTCCGGTTCAAAAAACA-TGAAGACAGTAAC
TATGCTAGGCAGTGGCTTCACTTTCTCTCCTCTGCAATCCCTTCT-ACCTGAATTTGTAACAATACCACTGCTGTATTTC
TCCAAC-CTCT-TTTGAGTGGTAATATATTC-------------------------------------------------
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>chr4D_1
CACAGATGACCCCACCCAAAACAACATCGCTGCAACT-ATTGGATGCAATCTCTCCTCCTTCCCGTTAATCTACCTAGGC
CTCCCTCTCTCCCCTCTCAAACTACCACTCTCAGCTTTCGACCCTATACTAGATAGCTTTCGAAAACTCCTTTTCGGATG
GGTTGCGCGTCTGCTCTCTCGTGGAGCAAGACTAACCTTGCTCACTGCTGTCCTCGATTCCTTAACTATTTACTTCATGT
CCGTTTTTCGCCTACCGAAGTCTATCCTAGTTAAGCTAGACGCCATCCGGAGAGCTTTTTTCTGGTCTAACGAAGAAACT
TGCACGGGTGCAAAGTGTCTGGTCGCGTGGAAAAATGTTTGCAGGCCTAAAGAACTGGGTGGTCTAGGCATTAAAAATCT
TGAAATTCAGAACCGCTGCCTACTTATGAAATTTTCCTTCAAAATTTTGCAACACCCAAACATCCCCTGGACCCAGTGGT
ATCATCAACAATACCCACTTGGGATTGCAACAAAAACCCCTAGGCCTTTTTTCCTTTGGAAGATTATAAACAAAAACCTG
CCTCTCCTAATTGAGCACTCCTTCGTGATTACCTACAACGGCCTCTCCACTTTCTTTTGGCTAGATAAATGGCTTCTTGA
CTCACCTCTACAAAAAGCTTTCCCCCACCTATACTCCCACTCCATAGATGACAAGGTTCTAGTGGCTACAGTTTGGCAAA
CCAGCTTATTATCGAACCTGCGGAACCGTCTTACTAATGCTGCTGCTCGAGAGTTGGACTGTCTGTTGT---TGTTGTTG
CAGGATTTCCAGCAGGTCGACCGTCCAGACGAGCGGTCCCTCACGCATGGGCTTGCTTTCTCTGCCAAGCACGCTTACTC
TTCCATTGTTGCTGATGACTCCTTCGATCCCCACCATGATTTTGTTTGGGCCTCTAAGGTTCCGATCAAAGTCAAGATTT
TCGCTTGGCTTC---TCC---GCGATCGGCTAAATACGAAGGCCAACATGTTTCACAATAATGTGGCTCAATCCGCAGTG
TGCCCTCGATGTCAAGACCCATATGAGGATGCTCTTCACCTCATCTCCACCTGCTCCTATGCTACACAAGTTTGGTCCAG
CATGGGCATGTTTGCTCC-GACATCTCTCACTGCTCTTCACCAACACCCACCGATTCAG-GGCCTCAACCCCAACATCTG
GCCATCGGTGGCCCTCACCATAACTTGGAAGCTCTGGGACTCAAGAAATGCTCCCGTGTTCAGGAACGAGGACCACTCTC
ACAGATTAACGCTAAGAAATATTGTAGCAGACT--TCTCTCTCTGGGTTTTCCGGTTCAAAAAAAA-TGAGGACAGGGCT
TCAGCTAGACAGTGGCTAAATTTTCTCTCCTTTGCAATTCCCTCT-AGCTGAACTTGTAACAATAACTTGCCTGTATTCC
CCTGAA-CCC--TTTGAATGGTAATATATTCAGGTGGGGAAGCTCTCCCCCC------CGTTGACCGTTCAAGAAAAA--
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>chr2D_1
CACGGATACCTCTTTTCAAAATAATATCGTGGCTGCT-GTCGGATGTAACTTCTCCTCCTTTCCGTTAATCTACCTAGGT
CTCCCTCTCTCCCCTACCAAACTACCCATCTCAGCTTTCGACCGTATCATAGACAGCTTTCGAAAATTCCTCTTCGGCTG
GGTAGCGCGTCTGCTCTCCTGTGGAGCAAGGCTAACTTTGCTGACAGCGGTCCTCGACTCCCTAGCTGTATATTTCATGT
TCGTCTTCCGCCTCCCTAAGTCTATCCTTGTTAAGCTTGACGCCATCCGGCGATCTTTCTTCTGGTCAAACGAGGACACG
TGCACGGGTGCGAGGTGTCTCGTCGCGTGGAAAAACGTATGCAAACCGAAAGAACTTGGTGGTCTAGGCATTAAAAATCT
AGAAATTCAGAACCGCTGCCTGCTTATGAAATTCTCCTTCAAAATTTTGCAACACCCAAACATCCCTTGGACTCAGTGGT
ATCACCACCAATATCCACTGGGCATTGCAACAAAAACCTCCAGACCCTCTTTTCTTTGGAAAATAATAAACAAAAACCTC
CCCCTCCTAATTGAGCACTCCTTTGTGATCACCTACAATGGCCTCTCCACCTTTTTTTGGCTAGATAAATGGATTCTCGA
GTCACCTCTCCACAAAGTTTTCCCTCACCTATACTCACACTCCATTGATGACAAGGTGCTAGTGGCTACCATTTGGCAAA
CCAGCTTATTATCGAACCTTCGGAGCCGCCTTACTAATGTTGCTGCCCGAGAGTTGGACTGCGTGTTGT---TGCTGTTG
CAAGATTTCCAACAGGTCGACCGACCAGACGAGCGGTCTCTCACGCATGGGCTTACATTCTCAGCCAAGAACGCATACTC
TTCCATTGTTGCTGATGACTCCTTTGATCCACACCATGATTTTGTCTGGGCTTCCAAGGTTCCGATCAAAGTCAAGATCT
TCGCGTGGCTTC---TCCTCCGCGACCGTCTAAATACGAAGGCCAACATGTTTCACAAACATGTTGCTCAATCCGCAGCC
TGCCCATGATGTCAAGACCCGTATGAAGATGCTCTTCACCTCATCTCCACCTGCTCCTATGCAGCACAAGTTTGGTCTCG
CCTGGGCCTGCCTGCCCC-GCCATCCCTCACTTCTCTTAACAAACACCCACCGATTCAG-GGCCTCAACCCCAACATCTG
GCCATCGGTGGCCTAGATAGTTTCTTGGAAGCTCTGGGACTCGAGAAATGCTCTCGTGTTCAGGAACGAAGACCACTCTC
TCAGAATAACGCTAAGAAATATTGTAGCTGATT--TCTCTCTTTGGGTTTTCCGATTCGAAAAGAC-TAAGGATAGTAAT
TCTGCTAGACAGTGGCTACATTTTCTCTCCTCTGCAATCCCCTCT-AGCTGAAATTGTAATCATACTTCTGCTGTAATCC
TCCGAC-CTTCATTTGAGTGGTAATATATTCAGGTGGGGAAGCTCTCCCCCC------CGGTGACCGTTCAAAAAAAC--
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>chr1A_13
------------CACCCAAAACAACATCGCTGCAACT-CTCGAGTGTAATTTCTCCTCCTTCTCGTTAATCTACCTAGGC
CTACCCCTCTCTCCTACCAAACTACCCCTCTCAGCTTTCGACCCTATCTTAGATAGCTTTTGAAAATTCCTCATCGGATG
GGTAGCGCGCCTGCTCTCTCGTGGAGCAAGACTAACTTTACTAACCTCGGTCCTAGATTCTTTAACTATTTATTTCATGT
CTGTTTTCCGGCTACCTAAGTCTATCCTTGTTAAGCTCGACGCCATTCGAAGAGCCTTCTTCTGGTCCAACGAGGATACT
TGCACGGGTGCCAAGTGTCTAGTTGCGTGGAAAAACATTTGCAAACCTAAAGAATTTGGTGGTCTAGGCATTAAAAATAT
TGAAATTCAGAACCGCTGCCTGCTTATGAAATTCTCCTTCAAAATTTTGCAACACCCCAACATCCCTTGGACACTGTGGT
ATCATCACCAACATCCTCTTGGCATTGCAACAAAAACCCCTAGGCCCTCCTTTCTTTGGAAAATTGTAAACAAAAACCTC
CCTCTCCTAATTGATCACTCCTTTGTGATCACCTACAATGGCCTCTCCACCTTGTTTTGGCTAGAAAAATGGATTCTTGA
ATCACCACTACAAAAAGTTTCCCCCCACCTTTTCTCTCACTCCATAGATGACAAGGTTCTAGTGGCTACAATTTGCCAAC
CCAGCTTATTATTGAACCTTCAGAGCCATCTTACTAATGCTGCTGCTTGTGAGTTGGACTGTGTGTTGT---TCCTGCTG
CAAGATTTTCAACGGGTGGACCGGCCAGACGAGCGGTCCCTCACACATGGGTTGTCATTCTCAGCCAAGAACGCATACTC
TTCCATTGTTTCTGATGACTCCTTTGACCCACATCATGATTTTGTTTGGGCTTCTAAGGTCCCGATCAAAGTCAAGATCT
TCGCATGGCTTC---TACTTCGTGACCGGCTAAATACAAAGGCCAACATGTTTCATAAACATGTTGCTCAATCCGCAGCT
TGCCCAAGCTGTCAAGACCCATTCGAGGATGCTCTTCACCTCATCTCCACCTGCTCCTATGCAACACAAGTCTGGACTAG
CCTGGGACTGTCTGCCCC-AGCCTCCCTCACTGCTCTTCACCAACACCCGCTGATTCAG-GGTCTCAAGCCCAACATCTG
GCCATCGATGGCCTTGACCGTTTCTTGGAAACTCTGGGACTCGAGAAATGCTCTTGTTTTCAGGAATGAAGATCACTCTC
TCAAAACAACGCTAAGAAATATTGTAGCAGTCT--TCTCTCTCTGGGTTTTCCATTTCAAAAAACA-TGACGACAGTAAC
TATGCTAGGCAGTGGCTACATTTTCTCTCCTCTGCAATCCCTTCT-AGCTGAAATTGTAACAATACTA-TGTTGTATTTC
TCCGAC-CTCT-TTTGAGTGGTAATATATTCAGGTGGGGAAGCTCTCCCCCC-------GGTGACCGTTCAAAAAAA---
--------------------------------------------------------------------------------
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>chr3B_23
----------------------AACATCGCTACAGCT-ATTGGATGTTCTTTATCCTCCTTTCCACTAATATACCTAGGT
CTTCCCCTCTCCCCTACCAAACTGCCACTCACAGCCTTCGACCCGATCATAGATAGTTTTCAGAAATTCCTCTTCGGTTG
GGCAGCGCGCCTCCTCTCATGTGGTGCTCGCCTGACACTACTGACTGCGGTCCTAGACTCATTAACAATTTATTTCATGT
CAGTTTTTCGTCTACCTAAGTCGATCGTAGCTAAACTTGACGCCATTTGGAGGGCGTTCTTCTGGTCCAACGAGGCAACT
TGCACGGATGTGAGCTACTTAGTCGCGTGGAAAAATGTTTGCAAACCGAAAGACACTGGTGGTCTAGGCATTAAAAATCT
AGAAGTTCAGAACCGCTGCTTTCTTATGAAATTCTCATTCAAGATTCTGCAGAACCCAAACATCCCTTGGACACAGTGGT
ATCACCACCAGTACCCTCTTGGCATCACAACAAAAACTTCTAGACCCTCCTTTCTTTGAAAAATTATCAACAAAAACTTG
CCACTGCTCATTGAGCACTCATTTGTGATCACATACAATGGCCTCTCCACCTTTTTCTGGCTTGATAAATGGCTGCTACA
ATCGCCTCTCCACAAAGTTTTTCCCAACCTCTACTCACACTCCATGGATGACAAGGTTTTAGTGGCTACAGTATGGCAAA
ACAGCTTATTGGCGAACCTGCGGAACCGTCTGTCTAATGCTGCTGCTCGCGAGTTGGATAGTGTGTTGT---TGTTGTTG
CAGGATTTCCAGCAGGTGGACCGATCCGACGAACGGTCCCTCACCCATGGACTTCAGTTCTCTGCCAAGAACGCCTGCTC
CTCCATTGTTGCTGAAGATTCCGCCGACCCTCACCATGACTTTGTCTGGGCCTCCAAGGTTCCGATCAAGGTCAAGATCT
TCGCCTGGCTTCTTCTCC---GCGATCGGCTAAACACGAAAGCCAACATGCTTCACAAGCATATTGCCCAATCAGCTGCT
TGCCCCTGTTGTCAAGACCCGCATGAGGATGCCCTTCACCTCATCTCCAACTGTTCTTATGCGACACAGGTTTGGTCCTC
CTTGGGTCTGCCATCGCC-AACCTCCCTTGCTGCTCTGCACCAACACCCAATGATTCTG-GGCCTCAACCCCAACATCTG
GCCATCTGTGGCTCTGACTGTTGCATGGAAGCTATGGGACTCGAGAAACGCTCTCGTGTTCAGAAATGAGGATCACTCCC
ACAGAACTACAATACGAAACATTGTAGCAGATT--TCTCCCTCTGGGTTTTCCGGTTCAAAAAGAAA-GAAGACAATATC
TCTGCTAAGCAATGGCTTAACTTCCTCTCTTCCGCTATTCACTAAAAGTTGATGTTGTAACTCAACTACTGTTGTAATTC
TCGACTCCTC--TTTGAGTGGTAATATATTCAGGTGGGGAAGCTCTCCCCCC------CGGTGACCGTTCAAAAAAA---
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>chr4A_1583
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-----CACCAGCACATGACGCATC----TGCCAGCTAGAAGACAGATCGCCAACGACGGCGTGCGCAATTAGCCCATCGT
CTGATTGACTGATTGTTCTTTGTGAACATTTAATCTTGATTTCTCGGAATTGTTGGACAAGTATAGAGGATTATGTTGGT
TCCCTAAC--TTTCCATTCATCTATTGCATCATCCAGTCAATTTTGAGGGCGGTTTGCATTGGCTCTTTACTATAAAACT
TGTGAAGAACTGCAAGAAAAAGAAGGCGAAGTTTATGCACCTAAATTTCTGAAATATGAACATTCAAATTTTTAAGACTG
TCCACCATGCCATCATTACTATCCAACATGTTTTTA---ATGTGTATAGGTGTGAAC-----------------------
--------AATGAAGAACAAATATGATGATTTGAAACGTTTGTGGGGGAGAGCTTCAAAGGCGCTGAACATAAGTTTGAC
ATCAACACTGACATCGGTATCTATCGACGTTGAAACCCAAGTTCAGGATCAAAATAAGAGCATCCACCTTCCAACGAGCT
ACAGTTGGCACTTGTATAGCCAG------------GTAATAATTTATAGTTTCGTTGTTCGTATTATGAACATTTTTATA
TGTTACATTGTTGTGCAGAAA-AAAACTTGTTTTACTCCACATACCCATGTCGCAAATCCTGGCTCCGCCACTGCAACCA
A-------------------------------------------------------------------------------
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>chr4A_1583
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-----CACCAGCGCATGACGCATC----TGCCAGCTGGAAGACAGATCGCCAACAACGGCGTGCGCAATTAGCCCATCGT
CTGATTGACTGATTGTTCTTTGTGAACATTTAATCTTGATTTCTCGGAATTGTTGGACAAGTATAGAGGATTATGTTGGT
TACCTAATTTTTTCCATTCATCTATTGCATCATCCAGTCAATTTTGAGGGCGGTTTGCATTGGCTCTTTACTATAAAACT
TGTGAAGAACTGCAAGAAAAAGAAGGCGAAGTTTATGCACCTAAATTTCTGAAATATGAACATTCAAATTTTTAAGACTG
TCCACCATGCCATCATTACTATCCAACATGTTCTTA---ATGTGTATAGGTGTGAAC-----------------------
--------AATGAAGAACAAATATGATGATTTGAAACGTTTGTGGGGGAGAGCTTCAAAGGCGCCGAACATAAGTTTGAC
ATCAACACTGACATCAGTATCTATCGACGTTGAAACCCAAGTTCAGGATCAAAATAAGAGCATCCACCTTCCAACGAGCT
ACAGTTGGCACTTGTATAGCCAG------------GTAATAATTTATAGTTTCGTTGTTCGTATTATGAACATTTTTATA
TGTTACATTGTTGTGCAGAAA-AAA-------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5A_1610
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--------------------------------ATCTAGAAGAAAGGTCGCCAACAACAGCGTGCGCAATTAGCCCATTCT
--------CTGGTTGTACTCTGTGAGCCTTTAATCTTGATTTCTCCGACCTGTTTGTGAAGAATAGAGGATTATCTTCGT
TCCCTAATTTTTTCCATTCATCTATTGCAGCATCCAGTCAATTTTGATGGCGGTTTGCATTGGCTCGGTACTATAAAACT
TGTGAAGAACTGCAAGAAAAACAAGGCGAAGTTTATACACCTAAATTTCTGAAATATGAACATTCGAATTTGTAGGACGG
TCCACCATGCCATCATCACTATCCAACATGTACTTTTTTATGTGTATAGGTGTGAATAAAATCCATTCTTCGAAAAATAG
GTGTGAATAATGAAGAACAAGTATGATGATTTGAAGCGTTTGTGGGAGAGAGCTTCAAAAGCGCCGAACATAAGTTTAGC
ATCAACTCCAATACTGGTATCCATCGACGTTGAAAACCAAATCCAGGATCAAAATAAGAGCAACCACCTTCCAACAAGCT
ACAGTTGGCACTAGTATAGCCAGGTAAACAACCATGTAATAATTTATAGTTTTGTTGTTATTATTATGAACATTTTTATG
TATTACATTGTTGTGCAAAAAAAAAACTTCTTTTACTCCACATACCCATGTTGGAAATCCTGGCTCCGCCA---------
--------------------------------------------------------------------------------
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-----
>SNPs
-----------------------------------------------S----------S---------------------
-----------------------------------------------------------------S--S-----------
-----------------------------------------------S--------------------------------
--------S----S--S-------------------------------S-----S-----------------S-------
----S---------------------------------------------------------------------S-----
--S------------------------------------SS-------------------S-------------------
------------S-------------------------------S-----S-----------------------------
--------------------------------------------------------------------------------
---------S-----------S-----------S-----------------------S------S-S-------------
------------S-------------------------------------------------------------------
----------------------S------S--------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------S-------------------------S---------------------------
------------------S--------------------------------------S----------------------
--------------------------------------------------------S--------------------S--
----S--------------------------S-------------------------S----------------------
---------------------------S-----------S----------------------------S-----------
-----------------------------S------S-----------S-------------------------------
-------------------------------------S----------S-----------------------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS------S-----------SSSSS--------------------------------S-------------------
--S-----------------------------------------SS-----S--SS---------------------S--
---S-----------------------------------------SS--SS------S----------------------
---------------------S----------------------------S---------S----------S--------
-----------------------------------S--------------------------------------------
-------------------------S-----------S--------------------------------------S---
----------------------------S-------------SS------------------------S---S-------
--------------------------------------------------------------------------------
-----------------------S-SS------------S----------------------S----------S--S---
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_295
--------------------------------------------------------------------------------
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-----------------------------------CTCGACGCCATTCAGAGAGA-------------------------
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>reverse_2350
--------------------------------------------------------------------------------
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-----------------------------TCGTCGGAGTCGCAAAGAAA-------------------------------
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-----
