>input_sequence_81493
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-------ATGCTGCCGCTGCAGCTGCTGGGATGGGCTGCGTGCCTCGCCGGCGCGGCCTACGTCGCCGTGGTGTGCCAGC
TGGCCTGCGTGGTGTCCCTGCTCGAGGACGCCGTGCTCTTCCGCGCCCTGCGCAAGAGCCGCGCGCTCCTCGCCGGCAAG
TTCTGGGCGGCCGCCGGCGTCTTCGTCACGCTCGACGGGTGCATCTTCGCCCTTCTGGTGGCTTTCCCGGCCCTGGTGGT
GGACGATGCGCTGGGCCTCGGCCTCGGGTTCCAGGTGGCCGCCGGGGCCGCGATGGCGGTGGCGCTGTGCGCGGTGGTGC
TTTCGACGCTGGTGGCGCAGCCGGTGGTCTACATGGTGTGCAAGAACCACCACCACGATGTCGTCGACAAGGTTCACCTC
GACTGA--------------------------------------------------------------------------
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------------------------------------------------------------
>chr1A_1_TraesCS1A01G081900
CTGGCAGGAAGTGTGGCGCCTAAGGGATAGGCGCTGCACAGCAGGGTGCGACGCCTAGCTGTCGGGCGCCACACGAAAGG
GTCAGCAGAGTGAAATTTTTTTGAAAGCAGGTCAGTTTGTGAATTGATTTCTGCCTCAGGTCAAAAATGTGATTTCTGCC
GTGACGATGAGCCCATGCCATTCCATTCCGGTGCATGCAGAGGCTCTGAGACCATAGAGTAGCTAGATGAGGAAACCAGT
GGGCAGTGGGAGCGCCTTGAGCTTCTCTCTGGCGCTTGTGCTCGCGTGGGTGAGTAATAAATCGCAATGCACTCGCCCGT
GAACTATCTCTCTCTCTATCTCACTAATCCCCGCAACAGGCAACCGGCGAGCATTTCGATGTACATTCCCCTTCCTCTGC
TCCTCCCAGTCTGCGTCTGCCCGTCCTCTTCCCTTCCCCCTTCAGTAGGGGGAACACTTCCATT----CCCTACGTGCTC
GAATGCTCGATCGATCCATGAAGTGGGCACCGGAGCAGCAGGCTCTCGGGGGCCTCGGCCTCGCCGGCGTCTGCCGGGAG
ACCTGCCGTGTGATCCGCCGCGCCATGCTCCCCAACTTCGTCAACCTCGGTCCCCCGCTGCTCTCCGCGCTCTTGCTCGC
CACCCCCGCC-------------CTCTGCTCCCGCGTCCTCGCCGACCTCC---ACCACGACGGCCCCGGCCTCCTCCGC
CTCGTCACCGACCGGCTCGCCTTTTTCCTCTCCGTGGCCGTCTCCATCGGTCTTGTCCTCCTGCTCGTGCTCCTCTG---
CACC---GCCGCCTACGTCTTCTGCGTCGCCTCCCTCTACTGCACCGGAGGCGACCTCCGCGCCGCCGATCGCGTCCTCA
GGGGGTTCCCCACGGCCCCGCTCGTGCGGCTCGTCTGCACCTTCCTCCTCGCCGCGGCCCC---CTTCCTCGTGGTCTGC
GCCTCCCTCTTCGTCGCCGCCTT---------------GTTCCAGCTCCAGGAGCTGCTCGACG---CTCCGGACAAGAA
CAAGATCATGCTGCCGCTGCAGCTGCTGGGATGGGCTGCGTGCCTCGCCGGCGCGGCCTACGTCGCCGTGGTGTGCCAGC
TGGCCTGCGTGGTGTCCCTGCTCGAGGACGCCGTGCTCTTCCGCGCCCTGCGCAAGAGCCGCGCGCTCCTCGCCGGCAAG
TTCTGGGCGGCCGCCGGCGTCTTCGTCACGCTCGACGGGTGCATCTTCGCCCTTCTGGTGGCTTTCCCGGCCCTGGTGGT
GGACGATGCGCTGGGCCTCGGCCTCGGGTTCCAGGTGGCCGCCGGGGCCGCGATGGCGGTGGCGCTGTGCGCGGTGGTGC
TTTCGACGCTGGTGGCGCAGCCGGTGGTCTACATGGTGTGCAAGAACCACCACCACGATGTCGTCGACAAGGTTCACCTC
GACTGAGTAAGAGCGGCCG----TCACACCGGCGTGGAGCGGCTGCAGCCCGTCTGAGACGGAGCAGATTCCAGTAACTC
TGCCTAGCTATAGCTGCATCCTGTCCATGACTCCA---TGGTAGCAACTTGAAGAAGATTTG------------------
-----------------CTTAAGTAGTACAGTAGC------GTAGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AGTAGCAAGTTGCTGTAGTTG-TAAGTTT
ATGTCTGATTAT--CACTGTGGCTACTGTACTATTAGTAGTAGTAGTACAGTAGATTAGTATATGCATGCTTGGGACTAT
ATATTTGT--------GGTGGTCTTTGATGCCTTTTTGGTTCATAGGATAGGATTATTGTAGGAATAGGAATTTTGTAGG
AAATGAGATGACATATATCTTAGATCCTATGAGTAGGAATAGGAAACGAGATATCATTTGTTTGACATCAAAGAAAATTT
TTCATTGAGTCTAGGTTCATTTTTATTTTTCTATGAAATGTGGATAATAGGAACCACATCCATTCCTATGAATCAAAAGA
CTCTAAAGGAAAAAATCATATAAAAATCTTATCCTCTAGAATTTCTATGAAATTTTTCCAAATCAAAGGAGGCTTGAGAC
TGTGAGAGGGAGTGCTGGGTAGTAGCTACTACAAGTACTACAATTGTTCGAGCTTGACAAATTTTGCACAAACTGTGTGA
GGCAAATCAAGTGTTTGATTTTGTTC---TTTTTCTTGGACATGGGAAGAAGAATGTATCGTGCTCTCGGTCGGGAGGAC
CAGGGGTCTAGGGCTCATGGCC-----------------AACTCGTTTATAAACAAACAATACCTGGCCAAGCCCTGG-C
CTGATGGTTTTCCATTTGAGTTTATCAAAGATTTTGGAATATAATTAAATGAGATCTAAAAGCTATGCTTGATGATTTCC
CTAGAGGAAATATTAATATTGTTATAGGTTGAACTATGCTATACTCACAATGCTAAACAAATTTC---------AGAAGT
TCAGACTTATTTGCCCGGGGGCAGGGTGGGACTAGACTTTCACGTGCACTCCACCCACCC
>chr1D_354
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------CAACAGGCAACAGGCGAGCATTTCGATGTTCATTCCCCTTCCTCTGC
TCCCCCCAGTCTG------CCCGTCCTCTCCCCTTCACTTCAGCAGCGCACTTTCCTTCTCGAAACCACCCTCCGTGCTC
----GCTCGATCGATCCATGGAGTGGACGCCCGACCAGCAGGCTCTCGGGGGCCTCGGCCTCGCCGGCGTCTGCCGGGAG
ACCTGCCGTGTGATCCGCCGCGCCATGCCCCCCGACTTTGTCAACCTGGTTCCCCCGCTGCTCTCCGCGCTCTTGCTCGC
CACCTCCGCCGCCATCC-ACATCCTCCGCTCCCGCGTCCTCTCCGACCTCC---ACCACGACGGCCCCAGCCTCCTCCGC
CTCGTCACGGACCGGCTCGCCTTCTTCCTCTTCGTGGCCGTCTCCACCGGCCTTGTCCTCCTGCTCATGCTCCTCTG---
CACC---GCCGCCTACGTCTTCTGCGTCGCCTCCCTCTACTGCACCGGGGGCGACCTCCGCGCCGCCGATCGCGTCGTCA
GGGGGTTCCCCACGGTCCCGCTCGCGCGGCTCCTCTGCACGTTCCTCCTCGCCGCAGGCCC---ATTTCTTGTGATCTGC
ACCTCCCTCTTCGTCTCCGCCTT---------------GTTCCATCCCCAGGAGCTGCTGGGCG---CTCC------GGA
CAAGATCATGCTGCCGATGCAGCTGCTGGGATGGGCCGCGTGCCTCGCCGGTGCGGCCTACGTCGCCGTGGTGTGCCAGC
TGGCCTGCGTGGTGTCCCTTCTCGAGGACACCATGCTCCTCGGCGCCCTGCGCAAGAGCCGCGCGCTCCTCGCCGGCAAG
TTCTGGGCGGCCGCCGGCGTCTTCGTCACGCTCGACGGCTGCATCTTCGCCGTGCTGGTGGCCTTCCCGGTTCTGGCGGT
GGACGACGCGCTGGGCCCCAGCCTCGGGTTCCAGGTGGCCTACGGGGCGGCGACGGCGGTGGCTCTCAGCGCGGTGGTGC
TGTTCACGCTGGTGGCACAGCCGGTGGTCTACATGGTGTGCAAGAACCACCACCACGAGGTCGTCCACAAGGTCCACCTC
GACTGAGTACGAGCGGCCGT----CACACCGGCATGCAGCTGCTGCAGCCTGTC-AAGACGGAGCCAATTCCAGCAACCC
TGCCTAGC--TAGCTGCATCCTGTCCACGACTCCACGGTGGTAGCAACTTGAAGAAGATTTGACTTTCCAGCGCAAAAAA
AGAAAGAAAAGATTTGACTTAAGTAGTACAGTAGC------TTAGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AGTAGCAAGTTGCTGTAGTCGTTAAGTTT
ATGTCTGATTAT--CACTGTACCGTCGTAAGTTTATGTATGATTATCACTGCACCGGA-TATATGCATGCTTGGGATTAT
CAATTATGTATGTGTGGGGGTCT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTGAAAC
TGCGAGTGGGAGTGCTGGGTAGTAGCTAGCTAG-----TACAATTGTTTAAGCTTGACAAATTTTGCTCAAACTGTGTGA
GA-----------------------C---TTTTTCTTGGACATGAGAAGAAGAATGTGTCGTGGTCTCGGACGGGAGGAC
CAGGGGTTTAGGGCTCATGGCC-----------------A--------------AAACAATACCTGGCCAAGCCTTGGAC
CTGATGGTTTTCCAATTGAGTTTATCAAAGATTTTGGAATATAATTAAATGAGATCTAAAAGCTATGCTTGACGATTTCC
ATGAAGGAAATATTATTATTGCTATAGGTTGAACTATGGTATACTCACAATGCTAAACAAATTTAAACAAATTGAGAAGT
TCAGACTTATTTGCCCCGGGGCAAGGTGGGACTAGACTTTCACGTGCACTCCATCCACCC
>chr1A_465
--------------------------------------------------------------------------------
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--------------------------------------------------------------------CCCTACGTGCTC
GAATGCTCGATCGATCCATGAAGTGGGCACCCGACCAGCAGGCTCTCGGCAGCCTCGGCCTCGCCGGCGTCTGCCGGGAG
ACCTGCCGTGTGATCCGCCGCGCCATGCTCCCCAACTTGGTCAACCTCGGTCCCCCGCTGCTCTCCGCCCTCTTCCTCGC
CAGCTCCGCCGCCATCC-GCGCCGTCTGCTCCCGCGTCCTCTCCGACCTCCACGACCACGACGGCCCCAGCCTCCTCCGC
CTCGTCACCGACCGGCTCGCCTACTTCCTCCTCGTGGCCGTCTCCATCGGCGTCGTCCTCCTGCTCGTGCTCCTCTG---
CACCACCGCCGCCTACGTCTTCTGCGTCGCCTCCCTCTACTGCACCGGGGGCGACCTCCGCGTCGCCGATCGCGTCCTCA
GGGGGTTCCCCACGGTCCCGCTCACGCGGCTGGTCTGCACGTTCATCTTCGCCGCAGGCCC---ATTTCTTGTGATCTGC
ACCTCCCTCTTCGTCGCCGGCTT---------------GTTCCATCCCCAGGAGCTGCTGGGCG---CTCC------GAA
CAAGATCATGCCGACGATGCACCTGCTCGCATGGGCCGCGTGCCTCGCCGGCGCGGCCTACTTCTCCGTGGTGTGCCAGC
TGGCCTGCGTGGTGTCCCTGCTCGAGGACGCCATGCTCTTCCGTGCCCTGCGCAAGAGCCGTGCGCTCCTCGCCGGCAAG
TTCTGGGCGGCCGCCGGCGTATTCGTCACGCTCGACGGCTGCATCTTCGCCGTGCTGGCGGCTTTCCCCGTTCTGGTGGT
GGACGATGCGCTGGGCCTCGGCCTCGGGTTCCAGCTGGCCGCCGGGGTGGCGATGGCGGTGGCTCTGTGCGCGGCCGTGC
TGTTGACGCTGGTGGCGCAGCCGGTGGTCTACATGGTGTGCAAGAACCACCACCACGAGGTCGTCGACAAGGTTCACCTC
GACTGAGTACGAGCGGCCGTCAGTCACACCGGCGTGGAGCCGCTGCAGCCCGTCTGAGACGAAGCAGATTGCAGCAACTC
GGCCTGGC--TAGCTGCATCATGTCCACGATTCCACGGTGGTAGCTACGTGAAGAAGATTTGACTTAACT----------
---------------------AGGAGTACAGTAGATTAGTAGTAGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AGTAGTAAGTTGCTGTAGTC---AAGTTT
ATGTGTGATTAT--CACTG-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr1D_480
TGCTCGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------CGATCGATGGAGTGGACACCAAAGCAGCAGGCTCTCGGCGGCCTCGGCCTCGCCGGCGTCTGCCGGGAG
ACCTGCCGTGTGATCCGCCGCGCCATGCTCCCCAACTTCGTCAACCTCGGTCCCCCGCTGCTCTCCGCGCTCTTGCTCGC
CACCTCCGCCGCCATCC-GCGCCCTCTGCTCCCGCGTCCTCTCCGACCTCC---ACCACGACGGCCCCGGCCTCCTCCGC
CTCGTCACGGACCGGCTCGCCTTCTTCCTCCTCGTGGCCGTCTCCATCGGCGTCGTCCTCCTGCTCGTGCTCCTCTG---
CGCCACCGCCGCCTTCGTCTTCTGCATCGCCTCCCTCTACTGCACCGGAGGCGACCTCCGCGCCGCCGATCGCGTCCTCA
GGGGGTTCCCCACGTTCCCGCTCGCGCGGCTCGTCTACACGTTCCTCCTCTCCGCGGTCCC---CTTCCTCGTGATCTGC
GCCTCCCTCTCCGTCGCCGCCCT---------------GTTCCATCCCCAGGAGCTGCTTGGCTCTCCTCC------GGA
CAAGACCATGCTGCCGCTGCAGCTGCTGGGATGGGCCGCATGCCTCGCCGGCGCGGCCTACGTCGCCGTGGTGTGCCAGC
TGGCCTGCGTGGTGTCCCTGCTCGAGGATGCCATGCTCTTCGGCGCCCTGCGCAAGAGCCGTGCGCTCGTCGCCGGCAAG
TTCTGGGCGGCCGCCGGCGTCTTCGGCACGCTCGACGGTTGCATCTTCGCCTTGGTGCTCGCTTTCCGGGCTCTGGTGGT
GGACGATGCGCTGGGCCTCGGCCTCGGGTTCCAGGTGGCCGCCGGGGCGGCGATGGCGGTGGCTCTGTGCGCGGTCGTGC
TGTTGACGCTGGTGGCGCAGCCGGTGGTGTACATGGTGTGCAAGAACCACCACCACGAGGTCGTCGACAAGGTTCACCTC
GACTGAGTACGGGCGGCCGT----GACACGGGCGTGGAGCTGCTGCAGCCCGTC-AAGACGGTGCAGATTCCAGCGACTC
TGACTAGC--CAGCTGCATCCTGTCCACGACCCCA---TGGTAGCAACTTGAAGAAGATTTG------------------
-----------------CTTAAGTGGTACAGTAGC------TTAGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AGTAGTAAGTTGCTGTAGTCC-TAAGTTT
ATGTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr1D_480
TGCTCGC-------------------------------------------------------------------------
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-----------CGATCGATGGAGTGGACACCAAAGCAGCAGGCTCTCGGCGGCCTCGGCCTCGCCGGCGTCTGCCGGGAG
ACCTGCCGTGTGATCCGCCGCGCCATGCTCCCCAACTTCGTCAACCTGGGTCCCCCGCTGCTCTCCGCGCTCTTGCTCGC
CACCTCCGCCGCCATCC-GCGCCCTCTGCTCCCGCGTCCTCGCCGACCTCC---ACCACAACGGCCCCAGCCTCCTCCGC
CTCGTCACCGACCGGCTCGCCTTCTTCCTCTTCGTGGCCGTCTCCACCGGCCTTGTCCTCCTGCTCGTGCTCCTCTG---
CACC---GCCGCCTACGTCTTCTGCGTCGCCTCCCTCTACTGCACCGGGGGCGACCTCCGCGCCGCCGATCGCGTCCTCA
GGGGGTTCCCCACGGTCCAGCTCACGCGGCTCGGCTGCACGTTGCTCCTCGCCGCGGTCCC---CTTTCTCGTGGTCGAC
ACCTCCCTCTTCGTCGCCAGCTGCAGGACCTGCTTGGCGCTCCAGCTCCAGGACCTGCTTGCCG---CTCCGGACAAGGA
CAAGATCATGCTGACGATGTACCTGCTCGCATGGGCCGCGTGCCTCGCCGGCGCGGCCTACGTCGCCGTGGTCTGCCAGC
TGGCCTGCGTGGTGTCCCTGCTCGAGGATGCCATGCTCTTCCGCGCCCTGCGCAAGAGCCGTGCGCTCCTCGCCGGCAAG
TTCTGGGAGGCCGCCGGCGTCTTCGTCACGCTCGACGGCTGCATCTTCGCCGTGCTGGTGGCTTTCCCGGCTCTGGTGGT
GGACGACGCGCTGGGCCTCGGCCTCGGGTTCCAGCTGGCCGCCGGGGCGGCGATGGCGGTAGTTCTGTGCGCGGTGGTGC
TGTTGACGCTGGTGGCGCAGCCGGTGGTCTACATGGTGTGCAAGAACCACCACCACGAGGTCGTCGACAAGGTTCACCTC
GACTGAGTACGAGCGGCCG-CCGTCACACCGGCGTGGAGCTGCTGGAGCCCGTCTCAGACGAAGCAGATTGCAGCAACTC
TGCCTAGC---AGCTGCATCCTGTCCACGATTCCACGGTGGTAGCTACGTGAAGAAGATTTGACTTAA------------
----------------------GTAGTACAGTAGATTAGTAGTAAGTTGCTCTAGTTGTAAGTTTATGTGTGATTATCAC
TGTAGCGTCGTAAGTTTATGTGTGATTATCACTGCACCGGATATGCATGCTTGGGAGATTATATGGGTGGGGGTCTGTGA
GACTCTGACTAGGAGTGCTGGGTAGTACTCAACTAATATAAAAGCGTTTAGATCGCTATTTTAGTGATCTAAATGCTCCA
CGGTGGTAGCAACGTGAACAAGATTTGACTTAAGTAGTACAGTAGTTTAGCAGTAGTAAGTTGCTGTAGTCG-TAAGTTT
ATGTCTGATTATATCACTGTACCGTCGTAAGTTTATGTCTGATTATGACTGCACCGGA-TATATTCATGCTTGGGATTAT
ATATGCGT--------GGGGTCT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTGAGAC
TGTGAGTGGGAGTGCTGCGTAGA----AGCTAG-----TACAACTGTTTAAGCTTGTCAAATTTTTGCAGAAACAG----
---------------TGATTTTGTTGCTTTTCTTGTTGGACATGGGAAGAAGAATGTATCGTGGTCTTGGACGGGAGGAC
CAGGGGACAGATCTCCAAATGACCAACCCGTTTATAGAGA--------------AAACAATACCTGGCCAAGCCTTGG--
--------------------------------------------------------------------------------
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------------------------------------------------------------
>chr1B_480
TGCTCGC-------------------------------------------------------------------------
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-----------CGATCGATGGAGTGGACACCAAAGCAGCAGGCTCTCGGCGGCCTCGGCCTCGCCGGCGTCTGCCGGGAG
ACCTGCCATGTGATCCACCGCGCCATGCTCCCCAACTTCGTCAACCTGGGTCCCCCGCTGCTCTCCGCGCTCTTGCTCGC
CAGCTCCGCCGCCGTCC-GCGCCCTCTGCTCCCGCGTCCTCGCGGACCTCCACGACCACGACGGCCCCAGCCTCCTCTGC
CTCGTCACGGACCGGCTCGCCTTCTTCCTCTTCGTGGCCGTCTCCATCGGCCTTGTCCTCCTGCTCCTGCTCCTCTG---
CGCC---GCCGCCTACCTCTTCTGTGTCGTCTCCCTCTACTCCACCGGAGGCGACCTCCGCGCCGCCGATCGCGTCCTCA
GAGGGTTCCCCACGGTCCCGCTCACGCGGTTCGTCTGCACCTTCCTCCTCGCCGCGGTCCC---CTTCTTCGTGATCTGC
ACCTCCCTCTTCGTCGCCGCCTT---------------GTTCCAGCCCCAGGAGCCGCTCGGCG---CTGC------GGA
CAAGATCATGCTGCCGCTGCAGCTGCTGGGATGGGCCGCGTTCCTCGCCAGCGCGGCGTACGTCGCCGTGGTGTGCCAGC
TGGCCTGCGTGGTGTCCCTGCTCGAGGACGCAGTGCTCTTCGGCGCCCTGCGCAAGAGCCGCGCGCTCGTCGTGGGCAAG
TTCTGGGCGGCCGCCGGCGTCTTCGTCACGCTTGACGGCTGCATCTTTGCCGTGCTGGTGGCTTTCCCCGTTCTGGTGGT
GGACGATGCGCTGGGCCTCGGCCTCGGGTTCCAGGTGGCCGCCGGGGTGGCGATGGCAGTGGCTCTATGCGCGGTGGTGC
TGTTGACGCTGGTGGCGCAGCCGGTGGTCTACCTGGTGTGCAAGAACCACCACCACTTGGTCGTCGACAAGGTTCACCTC
GACTGAGTACGAGCGGCCCTCCGTCACACGGGCGTTGAGCGGCTGCAGCCCGGC-AAGACGGAGCAGATTCCAGTAACTC
TGACTAGC--TAGCTGCATCCTGTCCACGACTCCA---TGGTAGCAACTTGAAGAAGATTTG------------------
-----------------CTCAAGTAGTACAGTAGC------TTAGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AGTA-------------------------
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------------------------------------------------------------
>chr1B_480
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---TGCTCGATCGATCCATGGAGTGGACACCCGACCAGCAGGCTCTCGGGGGCCTCGGCCTCTCCGGTATCTGCCGGGAG
ATCTGCCGTGTGGTTCACCGCGCCATGCTCCCCAACTTCGTCAACCTGGGTCCCCCGCTGCTCTCCGCGCTCTTGCTCGC
CAGCTCCGCCGCCATCCCGCGCCCTCTGCTCCCGCGTCCTCTCCGACCTCCACGACCACGACGGCCCCGGCCTCCTCCGC
CTCGTCACGGACAGGCTCGCCTTCTTCCTCTTCGCGACCGTCTCCATCGGCCTTGTCCTCCTGCTCGTGCTCCTCTGCAC
CACC---GCCGCCTACGTCTTCTGCGTTGCCTCCCTCTACTCCACCGGAGGCGACCTCCGCGCCGCCGATCGCGCCCTCA
GGGGGTTCCCCACGGTCCCGCTCACGCGGCTCGTCTGCACGTTGCTCGTCGCCGCGGTCCCCATCTTCCTCGTGCTCTGC
GCCTCCATCTTCGTCGCCCCCTT---------------GTTCCATCCCCAGGATCTGCTCGGCA---CTCC------GGA
CAAGATCATGCTGCCGCTGCAGCTGCTGGGATGGGCCGCGTGCCTCGCCGGCGCGGCCTACGTCGCCGTGGTGTGCCAGC
TGGCCTGCGTGGTGTCCCTGCTCGAGGACGCCGTGCTCTTCCGCGCCCTGCGCAAGAGTCGCGCGCTCCTCGCCGGCAAG
TTCTGGGCGGCAGCCGGCGTCTTCGTCACGCTCGACGGTTGCATCTTCGCCCTGCTCGTGGCTTTCCCGGTTCTGGTCGT
GGACGATTCGCTGGGCCTCGGCCTCGGGTTCCAGCTGGCCGCCGGGGTGGCGATGGCGGTGGCTCTGTGCGCGGTGGTGC
TCTTGACGCTGGTGGCGCAGCC------------GGTGTGCAAGAACCACCACCACGAGGTCATCGACAAGGTCCACCTC
GACTGAGTTCGAGCGGCCGTCA----CACAGGCGTTGAGCTGCTGGAGCCTGTC-GAGACGGAGCAGATTCCAGCAAATC
TGCCTAGC--TAGCTGCATCTTGTCCACGACTCTACGGTGGTAGCAGCGTGAAGAAGATTTGACTTAA------------
----------------------GTAGTATAGTAGATT-------GT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AGTAGTAAGTTGCTGTAGTCG-TAAGTTT
GTGAGTGATTAT--CACTG-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------
>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-----------------S-----------------
---S---------SSSSSS----------S------S-SSSSSSSSS-SSSSSS-SS-SS-SSS----------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
-----------------------S-------S------------------S-----------------------------
--------------------------------------------------------------------------------
---------------S--------S--------------------------------S----------------------
-------------------------------------------------------------S------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------------S-----------------S--------
------------------------------------------------S--------------S----------------
-S-S------------------------------------------------------S---------------------
---------S----------------------------------------------------------------------
--------SS-----------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------SS-SS-SSS-S-S-SS---SS-S--SS--S-S-SSSS-S-----------------S---
-----S------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
------S---------------------SSSSSSSSSS----------SS-----------------S------------
-SSSSSSSSSSSSSS------------------------------------------------S------S---------
----------------------------------------SSSSSSSSSSSSSS--------------------S-----
--------------S---------------------------------------------------------S-------
S-SS-----------S-----S----------------S-------------------------S---------------
----------------S------S-----------------------------S------
>forward_187
--------------------------------------------------------------------------------
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-------TGAGCCCATGCCATTCCATT-----------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
>reverse_2311
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------GGCTTGAGAC
TGTGAGAGGG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
