>input_sequence_81486
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----------------------------------------------ATGGAGGGCAAGGTCGCAGCAATAGCTTTGGTCT
TGCTCTTTCTTACCTTGGGTGAGTCCGTACAACAAGATATCTTCTCTACTCTTTAGCACCTCTGTTGTACTACTTCGAAA
ATATGTAGCCTTGGGCAAGAATAGTGTGTTAGTTAAACTGACAAGTTTCATGCTGTTGTTGATTAATTGATTGAGTAGGT
GCAGAGGCCGAGTTGTGCAAGCAACGTAGCCGAACTTTCAAAGGGCGGTGCACCCACAACGACAACTGTGTCGCCATCTG
CCTCACTGAGAACTTCACCGGAGGGTATTGCCACGGCGTTGTAGAACGTCACTGCATGTGTACTAAGAAGTGTGGCGAGC
TGCCGGAAGAGCCGGAGGAGCCGCCGCCACCGGAAATGATGATCTGA---------------------------------
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>chr6B_1_TraesCS6B01G184900
GACTTCATCACCTCATCTAGAAAAAGGAGCACCTCAGTTATGTTTGACATTCAGCTTGCAGCCTCTATTCTTCCACCAGA
ATTTCATATCCACATCATTGTCATAGGGTGCTGGAACATCTGGACCCAAAGGAATAATTGGATTTCCAAAGGCAATGCTC
CAAGTA-CAACCCG-TGGAAAGAACTCCGCAGACAAGACCTAGAGAAAGTGTGCATTAATCAAAGAGAGTAGTCAAGAGG
CCTTCAAGACCTGGATTGTGAATAACCTCTGAATTTTTT--ATCATGTTACCTAGAACCGGTGTTGGTTATTTTGTATTC
TCTTTCTTTGGCTTTTGGCCTTTGTTCTTGTACATAAAATCTTAATATATTTACCGTAGAACAGTTGTTCTGCGGTGAGC
CTCCAAAAAAAGAACTCCTATTTTCTATATGAATAAGTAGTGGTAGTGTTAGGTTTTCC--AAAAAAAATCACCAAATAT
TTCTATGGAGTTTTGACTGCCAATTCCTTTTGTGTTAGGAGACAGAGAAGATTATGAACAAAGATTAAATATAAAGTACG
GTCTTTGCGATTTGCCTTTTTCATCTCGATTTGGTGCCTGGACCAACAAAATTTTAAAGTGTTCACCTCGGAGTTCCCTA
CTAAAACTTCACCTTGGAGATCCACGGAACACAACTTTGAAAATAGTAGTACAGTAAAGACCTCCAATGAACTTCTCTCA
TGGATATTTACTGGCCAGCGCAGAGATGTCACCAGGAAAAGATATGCACATTTATTTCACATAGTACTCCAAAAACCAAC
ATGCGTATCCAGATCTCGTAGCAAGGATATATGCAGATAAATGTTCATTAACTTCATTGTATCCAAAAACCAACATGCGT
ATCCATTTCAGAAGCTATCTGTGAATTAAATGCTACACACTCCTCGTACATACACAAGTTAGAACCCCAAGCTATATAAA
TGGACACTGAGCCCTTCCTCCTCTCATCACATCTCGATCCAACGACATGGAGGGCAAGGTCGCAGCAATAGCTTTGGTCT
TGCTCTTTCTTACCTTGGGTGAGTCCGTACAACAAGATATCTTCTCTACTCTTTAGCACCTCTGTTGTACTACTTCGAAA
ATATGTAGCCTTGGGCAAGAATAGTGTGTTAGTTAAACTGACAAGTTTCATGCTGTTGTTGATTAATTGATTGAGTAGGT
GCAGAGGCCGAGTTGTGCAAGCAACGTAGCCGAACTTTCAAAGGGCGGTGCACCCACAACGACAACTGTGTCGCCATCTG
CCTCACTGAGAACTTCACCGGAGGGTATTGCCACGGCGTTGTAGAACGTCACTGCATGTGTACTAAGAAGTGTGGCGAGC
TGCCGGAAGAGCCGGAGGAGCCGCCGCCACCGGAAATGATGATCTGACTGAAGTGTACCTGAGATTTGACTTGATGACAA
TAAAAATATCTCTCTACCAAAACCTGGTCAAAAAGTGAGAAATGAAATAAAGTAAACGATATTATCCGATACCAATATAC
CATTGCAGTAGCACAAACTGAACCTTTTACAGCTGAAAAAACAAACCATATGCCGCGAGAAAAATTTAACCATCCCCGTG
TTGTTGCTGTTGTTTTTCTTATAAGCGAGAAAGAACTTTGACCTTTGCATCGAGTAATGCTCACATCTATGCATTAATTA
TTGTAATGTTTACATGATTCGGTACAAAATGTAGTTCAAACAAAAATGCCCCAACTGGCAGGCAGAATGGAAGCTTTTTT
TTCTACGGTATTTGTTTGGTGTGTTGGTGTGTGCGGTGGTGCACTTGTTCATCGCTTTCGGACACATTTAGATACCGGTG
GGGCTTCGTGCCCATTCTACATGATTTTGGCCCATGATTCCCTAATTAACTATGCAACCCC-TTTTT----CTATATGAA
TAGATAGTGGTACTATTGGGTTTCCCAAAAAAATCATCAACTATTTCTATGGATTTTGACTACAAATTCCTTTGTGTTAG
GAGATAGAGAAGAAAGATTGCTAACAAAGATTACATATATAGTATGATCTTCGATATTTGCGTTTTCCATGTTGATTTGG
TGCTTGAACCAACA-------------------------------AAAGTTTGAAGTGTTTACTCGGAGTTCCCTACTCA
AACTCTAGTTTAGACTCATGGAACACGACTTCGAAAGTACAAAGACCTCTAGTAAACATTTCTCATGGATATTTACTGGC
TAGCGTAGAGATGTCACCATGAGAAG--ATATGCACATTTATTTCACATGGTACCAGATCTCATAGTAAGGATATATGCA
CATAAATGTTCACTAACTTCGTGGCATCCAAAAACCAACATGTGTA------TCCATTTCATAAGCAATCTATGAATGAA
ATGCTACAAATCCCTT-GTACTCCTTCCGGTCCTTTTTACTCCATGTATTAT
>chr6D_1
GACTTCATCACCCCACCTAGAAAAAGGAGCACCTCAGTTCTGTTTGATATTCAGCTTGCAGCCTCTATTCTTCCACCAGA
ATTTCATATGGACACCATTGTCATAGGGTGCTGGAACATCTGGATCCAAAGGAATAACTGGATTTTCAAAGGCATTGCTC
CAAGTATCAACCCT-TGGAAAGAACTCCGAAGACAAGACCTAGAGAAAGTGTGCATTAATCAAAGAGAGTAGTCAAGAGG
CCTTCAAGACCTGGATTGTGAATCACCTCTAATTTTTTTAAATCATGTTACCTAGAACCGGTGTTGGTTGATTTGTATTC
TCTTTATTTGGCTTTTGGCCTTTTTT---GTACATAAAATTTAATATATTTTACAGTACAACAATTGTTCTACGGTGAAT
TTTTTTAATA--------TATTTTCTATATCAATAGGTAGTGGTAGTGTTGGATTTTCC---AAAAAAATCACCAAATAT
TTCTATGGAGTTTTGACTACTGATTCCTTTTGTGTTAGGAGATAGAGAAGATTATGAACAAAGATTACAGATAAAGTATG
ATCTTTGCAATTTGCGTTTTTTATCTCGATTTGGTGCATGAACCAACAAAATTTTAAAGTGTTCACCTCGGAGTTCCCTA
CTGAAACTTCGCCTTAGAGATTCACCGAACACAACTTCGAAAGTATAGTA----TAAAGACCTCCAATGAACTTTTCTCA
TGGATATTTACTGGCCAGCACAGAGATGTCGCCAGGAAAAGATATGCACATTTATTTCACACAGTA--------------
--------CCAGATCTTGTAGCAAGGATATATGCAGATAAATGTTCATTAACTTCATTGTATCCAAAAACCAACATGCGT
ACCCATTTCGGAAGCAATCTGTGAATTAAATGCTACTCACTCCTCGTACATAGA-AAGTTAGAGCCCCAAGCTATATAAA
TGGACACTGAGCCCTTCCTCCTCTCATCACATCTCGATCCAACACCATGGAGGCCAAGGTCACAGCAATACCTTTGGTCT
TGCTCTTTCTTACCTTGGGTGAGTCCATTCAACAAGATATCTTCTCTACTCTTTAGCACCTCTGTTGTACTACTTCAAAA
ATATGTAGTCGTGGGCAAGAATAGTGTGTTAGCTAAACTGGCAAGTTTCATGCGGTTGTTGATTGATTGGTTGAGTAGGT
GCAGAGGCCGAGTTGTGCAAGCAGCATAGCCGAACTTTTAAAGGGCGGTGCACCCATAACGACAACTGTGTCGCCATCTG
CCTCACTGAGAACTTCACCGGAGGGTATTGCCACGGCATTGTAGAACGTCACTGCATGTGTACTAAGAAGTGTGGTGAGC
CACCGGAAGAGCCAGAGGAGCCGCCGCCACCGGAAATGATGATCTGACTGAAGTGTACCTGAGATTTGAGTTTATGACAA
TAAAAATATCTCTCTAACAAAAGCTGGCCAGATAGTGAGAAATGAAATAAAGTAAACCATATTATCCGATACCAATATAC
CATTGCAGTAGCACAAACTGAAGCTTTTATAGCTGAAAAGACAAACCATATGTCGACAGAAAAATTTAACCATCCCTGTG
TTGTTGCTGTTGTTTTTCTTATAAGCGAGAAAGAACTTCGACCTTTGCATCGAGTAATGCACACATCCATGCATTAATTA
TTGTAA-GTTTACATGATTTGGTACAAAATGTAGTTCAAATAAAAATGCACCAACTAGCAGGCAAAATGGAAACTTTTCT
T-CTACGACATTTGTTTGGTGTGTTGGTGTGTGCGGTGGTGCACTTGTTCACCGCCTTCGGACACATTTAGATACCGGTG
AGGCTTCGCGCCCATTCTACATGATTTTGGCCCATTATTCCCTAATTAACTGCATAACTCCTTTTTT----CTATATGAA
TAGATAGGTGTGCTATTGGGTTTCCC-AAAAAATCATCAAATATATCTATGGATTTTGTCTACAAATTCATTTGTGTTAG
GAGATAGGCAAGAAAGATTGCTAACAAAGATTACAGATATAGTATGATCTTCGATATTTGCATTTTCCATGTTGATTTGT
TGCCTCAACCAACA-------------------------------AAACTTTGAAGTGTTCACTTGGGGTTCCCTACTCA
AACTCCAGTTTAGACTCATGGAACACCACTTCAAAAGTACAAAGACCCCTGATGAACATTTCTCGTGGATATTTACTAGC
CAACGTAGAGATGTCACCATGAGAAGATATATGCACATTTATTTCACAAAGTACCAGATCTCATAGTAAGGATATATGCA
CATAAATGTTCACTAACTTCATGGTATCCAAAAACCAACATGCGTA------TCAG------AAGCAATCTATGAATTAA
ATGCTGCAAATCC-TT-GTACTTCCTCTGGTCCTTTTTACTCCACGTATTAT
>chr6A_1
GACTTCATCACCCCATCTAGAAAAAGGAGCACCTCAGTTCTGTTTGACATTCAGCTTGCAGCCTCTATTCTTCCACCAGA
ATTTCATATGGACACCATTGTCATAGGGTGCTGGAACATCTGGACCCAAAGGAATAACTAGATTTTCAAAGGCATCGCTC
CAAGTATCAACCCTTTGGAAAGAACTCCACATACAAGACCTAGAGAAAGTGTGCATTAATCAAAGAGATTAGTCAAGAGG
TCTTCAAGACCTGGATTGTGAATAACCTCTGATTTTTTAC---CATGTTACCTAGAACCGGTGCTGGTTAATTTGTATTC
TCTTTCTTTGGCTTTTTGCCTTTGTTTTTGAACATAAAATTTAATATATTTTACCGTAGAACAATTGTTCTACGGCGAGC
CTCCAAAAAAAGAACTCCTATTTTCTATATGAATAGGTAGTGGTAGTGTTGGGTTTTCCAAAAAAAAAATCACCAAATAT
TTCTATGGAGTTTTGACTACAAATTCCTTTTGTGTTAGGATATAGAGAAGATTATGAACAAAGATTACAGATAAAGTACG
ATATTTGCGATTTGCATTTTTCATCTCGATTTGGTGCCTGAACCAACAAAACTTTAAAGTGTTCACCTTGGAGCTCCCTA
CTGAAACTTCGCCTTAGAGATTCACGGAACACAACTTCGAAAGTACAGTA----TAAAGACCTCCAATGAACTTTACTCA
TGGATATTTACTGTCCAGCGCAGAGATGTCGCCAGGAAAAGATATGCACATTTATTTCACACAGTA--------------
--------CCAGATCTAGTAGCAAGGATATATGCAGATTAATGTTCATTAACTTCATTGTATCAAAAAACCAACATGTGT
ATCCATTTCAGAAGCAATCTATGAATTAAATGCTACACACTCCTCGTACATACA-AAGTTAGAACCCCAAGCTATATAAA
TGGACACTGAGCCCTCCCCCCTCTCATCACATCTCGATCCAACGCCATGGAGGCCAAGGTCGCAGCAATAGCTTTGGTCT
TGCTCTTTCTTACCTTGGGTGAGTCCATTCAACAAGATATCTTCTCTACTCTTTAGCACCTCTGTTGTACTACTTCAAAA
ATATGTAGCCGTGGGCAAGAATATTGTGTTAGTTAAACTGACAAGTTTCATGCGGTTGTTGATTGATTGATTGAGTAGGT
GGAGAGGCCGAGTTGTGCAAGCAGCGTAGCCGAACTTTCAAAGGGCGGTGCACCCACAACGACAATTGTTTTGCCATCTG
CCTCACTGAGAACTTCACCGGAGGGTATTGCCACGGCGTTGTAGAACGTCACTGCATGTGTACTAAGAAGTGTGGCGAGC
CGCCGGAAGAGCCAGAGGAGCCGCCGCTACCGGAAATGATGATCTGACTGAAGTGTGCCTGAGATTTGAGTTGATGACAA
TGAAATTATCTCTCTACCAAAACCTGGTCAGAGAGTGAGAAATGAAATAAAGTAAACCATATTATATGATACCAATATAC
CATTGCAGTAGCACAAACTAAACCTTTTACAGCTGAAAAGACAAACCATATGCCGACAAAAAAATTTAACTATCCCTGTG
TTGTTGCTGTTGTTTTTCTTATAAGCGAGAAAGAACTTTGACCTTTGCATTGAGTAATGCACACATCCATGCATTAATTA
TTGTAACATTTACATGATTCGCTACAAAATGTAGTTCAAAC-AAAATGCCCCAACTGGCAGGCAAAATGGAAAC-TTTCT
T-CTACGGCATTTGTTTGGTGTGTTGGTGTGTCCGGTGGTCCACTTGTTCATCGCTTTCG--------------------
--------TGCCCATTCTACATGATTTTGGTCCATGATTCCCTAATTAACTACATAACTCCTTTTTTTTTTCTATATGAA
TATGTAGTGGTACTATTGGGTTTCTC-AAAAAATCATCAAATATTTCTGTGGATTTTGACTACAAATTCCTTTGTGTTAG
G-GATAGAGAAGAAAGATTGCTAACAAAGATTACGGATATAGTAT-ATCTTCAGTATTTGCGTTTTCCATGTTGGTTTGT
TGCTTGAACCAACAAAAGTTTTTTTTTTTTGCGGGGGAACCAACAAAAGTTTGAAGTGTTAACTCAGCGTTCCGTACTCA
AACTCCAGTTTAGACTCATGGAACACAACTTCAAAAGTACAAATACCTCCGGTGAGCATTTCTCATGGATATTTACTAGC
CAGCGTAGAGATGTCACCATGAGAAG--ATATGCACATTTATCTCACATAGTACCAGATCTCATAGTAAGGATATATGCA
CATAAATGTTCACTAACTTCATAGTATCCAAAAACCAACATGCATATCCATTTCAG------AAGCAATCTACGAATTAA
ATGCTACAAATCC-TTTGTACTCCCTCAGGTCCTTTTTACTCCGTGTATTAT
>SNPs
------------S--------------------------S----------------------------------------
---------SS---S------------------------------------------S-------S--------S-----
-------------S------------------------------------------------------------------
--------------------------------S-------------------------------------S---------
--------------------------S-------------S-S-SSSSS--------------S-------S--------
-----------------------------------S--------------S-----------------------------
------------------S-S---------------------S------------------------S-S----------
S--------------S------------------------S---------------------------------------
--S-------S----S-----S---------------S----S--SSSSSSSSS--------------------S-----
------------------------------S------------------------------S----SSSSSSSSSSSSSS
SSSSSSSS--------S---------------------------------------------------------------
---------------S--------------------------------------S-------------------------
--------------------------------------------S--------S--------------------------
--------------------------S-S-----------------------------------------------S---
----------S------------------------------------------S----------S---------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
S------------S-------------------------------------------------------S----------
------------------------------S-S------------------------S----------------------
---------------------------------------S---------------SS-------------------S---
------------------------------------------------------------S------S------------
------S---------------------------------------------------------S-------S-----S-
-S------S-----------------------------------------------------------------------
S---------------------------------------------------SSS---S---------------------
--------------------------S-------------S---------------------------------------
-----------------------------------S-------------------------------------------S
------------------------------------------------------------S------S------------
-----S--------------------S-----S-----------------S--S-----------------------S--
S------------------------------------------------S------------------------------
--------------------S---S-----------------S-----------SSSSSSSS---------------S--
-------------S----------S--S------------------------
>forward_576
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----------------------------------------------------------------------------TACG
GTCTTTGCGATTTGCC----------------------------------------------------------------
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>reverse_1560
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---------------------------------------AACAAACCATATGCCGCGAG---------------------
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----------------------------------------------------
