>input_sequence_81401
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-------------------------------------------------------------ATGGGAGTCATCAAAATGC
TAAGCCTATTATGCCTGCTACTGCTCATGCCACTTCTTTTAGTTCCTTGTAAGAGTTGTTTGAAAATTTCAGATGAAGAA
CAAGGCACTTCCTTCGTGCAATATTTTAC--ATTTTCAAGTCATATGTGATATTCATACTCCATGCTACTTCTTTCTTTC
-----TTGTTTCTTCATGGAAGATTGTAGGATC-TAATTTTT--T-GTGCTCCATATCGTGTGGTTGTTTTGTAGGCTTG
GAAGCCAAGACTTGCGTTGTACATAGCAGGACCTATGAGACT-ATATCATGCAAGGTGGATCCATGTGTTGAGGCCTGCC
ACAAGGAGGGATTTACTTATGGGTTCTGCTCCCCCTAC---CCCCTTATAATAGTTTGTTTCTGCGTAAAAAACTGTTGA
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------
>chr6A_1_TraesCS6A01G277900
GAACCTAGGGAGGAGCAACACTACACTTCCCGTTCCAACGGGGGTTTGTAGCTCTCTATCCACCAAATAAACCACACACA
AACTAGGAGTAGGGTGTTATGCAACCATGCGGCCTGAACCTGGGTAGACCGTAGTGTCTTTCTACTCTATTCTCGTTGAG
ATAGATCCATGCCTTGCACACTGTCTATGAGTCGACAAGGGATGCCTCCAATCCTTGGTGTCTCGCTTGTGTTCTGCACA
TGCGGAC-GACGCCCGGTTACACTCTAAATCCTTGAGTATCCACAAATCTAGGCGCCATGTCCTTGTTTCCTAGCTTCCT
CCCTTCACTCACTCTCGATCTAACACGCGTCTAGCCCCACACACACCCATGCATCCTCCACTAAGAGTGAAACCAACTAG
TTGTGTCCTCATTTGTATTGCCATAATTCCAGCACTATACAATTTATACTTCCCAA-TATAATTTTTATATGTTGACAAT
CGAGTCATAAGAAAATATGACCTATTAAATAGTAATATGTGGCCTTGTGCCATTGATCAAAACAAAATATATGGTCAACA
--ATTAGGTGGCAACTATTTGAGGTTG-TTGAAAATCCATATGCACATGT-CAACAACTTCAATAAGTATAATTTAAATG
TTAACATTATTATACTTCACAAATTTGGTAGTTCATATCTTCT-TTCAAAACGACTACATGTAGACAAAGAGACATCTTG
TAGATACAATATTGAAATTCTATCCTACAAGTAGAAGTTAAATGTCTACATTATTATACTCCATAAAACTGTTGATTCAT
GTC--TTTTAGAACCAC-TTCCATGCAGATATAGCCACATCTTCTAGATATAATAT-AAGAATTTCAACATGCATATCTT
CTAGATAGAATCACAT-ATCTTATCATTCAG-TTTTTTAGGTCTCGTCTTTCTAGGCTATAAGATATGGCG-TAGCCTAT
CTCGATGTGCATCTACTC-------GCTTACTTGCTTTCGTAACTATTCATTTTTGAAGACATGGGAGTCATCAAAATGC
TAAGCCTATTATGCCTGCTACTGCTCATGCCACTTCTTTTAGTTCCTTGTAAGAGTTGTTTGAAAATTTCAGATGAAGAA
CAAGGCACTTCCTTCGTGCAATATTTTAC--ATTTTCAAGTCATATGTGATATTCATACTCCATGCTACTTCTTTCTTTC
-----TTGTTTCTTCATGGAAGATTGTAGGATC-TAATTTTT--T-GTGCTCCATATCGTGTGGTTGTTTTGTAGGCTTG
GAAGCCAAGACTTGCGTTGTACATAGCAGGACCTATGAGACT-ATATCATGCAAGGTGGATCCATGTGTTGAGGCCTGCC
ACAAGGAGGGATTTACTTATGGGTTCTGCTCCCCCTAC---CCCCTTATAATAGTTTGTTTCTGCGTAAAAAACTGTTGA
ATAAAAATCATGCTGCGACTATCATAGGATGTGTGATGTAACAAAT-AATAAGGTTATTTAGTATGATGAATTGAGAATG
GGAAATGCCAGAAGTTGAGTATCTACCAAATATTCCTTACC-TTTTGGCTTAACGTACAAATAGGACTACTCATGATGCA
GGTACATCAAACACATGGCACTATGCTAAAAAATCACATGCTAGA---AATGTGAGATGTGGTTACTTTGATTACCATAC
ACCCACAAACATTTTGTCCCTACCATATTCTCTAGCGTATGTCCTTCCCTCTGGTGATGCTTGTTAAAAGTATGACCTAT
AAGCAATAATAAAGTTGCTATTCTTCTATTTCCATGCTCATAATTAAGTTTATATTATTGCGTTATAAACCCAATGGTTA
TTCAATATGAGATTCGTAGGAAAACCCAGTGGCATGTGTGAAAAGATAAACACCAATCAGATCCCTAGCGTCAGTGTCAC
AGATAATGGGTACCTGTTGAACCCTCCATCATGTGGGCCGTGCCGACTCATTAATTACTGGGAGTACGCCGAGACATCAA
CAGAACCTGAAGCTCATACAAGACCCCTCTTAATGGATTCAAGTAAGGCAAGGCTTTGGAAGCCTTCCAGTTACATATTG
AAAAGCATCACCCTTGCATTGACTCCAACGAGGAGAGCATCAAGACATCCACACTCATCCTACGAATGTCCGAAGAATGG
GCTATCGCGAAGTGGTCGTCCCCTGTGAATAGGCGACGGATCCACCACGGGTCGAGCCCGACCCATGGGTGGGAGGAGCA
GCCCCCGAACAGTACATTGGCCTAGGCCAATGATAGCGTGGGAGGAGACCTTTGACGATGTGTTTCTCACTGGAGGCCAC
CCCGCTCTTAAGCAATCATGACGTGTCGAGCGTTTAGCCTATCTTTACCATGCACATGACAATTGTTTTGGTACGTTGAT
GTCTACTATGCAACTTTATTCTTGTAGACACATGTTGGGCCTCCA
>chr6D_1
GAACCTAGGGAGGAGCAACACTACACTTCCCACTCCA-GGGGGATTTGTAGCTCTCTATCCACCAAATAAACCACACACA
AACTAGAAGTAGGGTGTTATGCAATCGTGCGGCCTGAACCTGGGTAGACCGTAGTGTCTTTCTACTCTTTTCTCATTGAG
ATAGATCCACGCCTTGCACCCTGTCTATGAATCGACAAGGGATGCCTCCAATCCTTGGTGTCTCACTTGTGTTCTGCACA
TGCGGAC-GACACCCGGTTACACTCTAAAGCCTTGAGTATCCACAAGTCTAGGCGTCATGTCCTTGTTTCCTAGCCTCCT
CCCTTCACTCACTCTCGATCTAACACGTGTCTAGCCCCACACACACCCATGCATCCTCCACTAAGGGTACAACCAACTAG
TTGTGTCCTCATTTGTATTGCCATAATTTCAACACTATACAATTTATACTTCCCAAATATAATGTTTATATGTTGACAAT
CCAGTCATAAGAAAATATGACCTATTAAATAGTAATATATGGCCTTGTGCCATTGATCAAAACAAAATATATGGTCAACA
--ATTAGGTGGCAACTATCCGAGGTTG-TTGAAAATCCATATGCACATGT-CAACAACTTTAATAAGTATAGTTTAAATG
TCAACATTATTATACTTCAGAAATTTGGTAGTTCATATCTTCT-TTCAAAACGACTACATGCAGACAAAGCGACATCTTG
TAGATATAATATTGAAATTGTATCCTACAAGTAGAAGTTAAATGTCTACACTAT-ATACTCCATAAAATTGTTGATTCAT
GTC--TTTTAGAACCAC-TTCCATGCAGATATAGCCACATGTTCCAGATATAATAT-AAGAATTGCAACATGCATATCTT
CTAGATAGAATCACAT-ATCTTATCATTCAG-TTTTTTAGGTCTCGTCTTTCTAGGCTATAAGATATGGCA-TAGCCTAT
CTCGATGTGCATCTACTC-------GCTTACTTGCTTTCATAACTATTCATTCCTGAAGACATGGGAGTCATCAAAATGC
TAAGCCTATTATGCCTGCTACTGCTAATGCCACTTCTTTTAGTTCCTAGTAAGAGTTGTTTGAAAATTTTATATGAAGAA
CAAGGCACTTCCTTCATGCAATATTTTAC--ATTTCCAAGTCATATGTGATATTCATACTCCATGCTACTTCTTTCTTTC
-----TTGTTTCTTCATGGAAGATTGTATGATC-TAATTTTT--T-GTGCTCCATATCGTGTGGTTGTTTTGTAGGCTTG
GAAGCCAAGACTTGCGTTGTACATAGCAGGACCTATCAGACT-ATATTATGCAAGGTGGATCCATGTGTTGAGGCCTGCC
ACAAGGAGGGATTTACTTATGGGTTCTGCTCCCCCTAC---CCCCTTATAATAGTTTGTTTCTGCGTAAAAAAATGTTGA
ATAAAAATCATGCTACGACTATCATAGGATGTGTGATGTAACAAAT-AATAAGGTTATGTAGTATGATGAATTGAGAATG
GACAATGCCAGAAGTTGAGTATCTACCAAATATTCCTTACC-TTTTGGCTTAAAGTACAAATAGGACTACTCACGATGCA
GGTACATCAAACATATGTTGTAATGCTAAAAAATCACATGCTAGA---AATGTGAGATGTGGTTACTTTGATTACCATAC
ACCCACAAACATTTTGTCCCTATCATCTTCTCTAGCGTATGTCCTTCCCTTTGGTGATGCTTGTTAAAAATATGCCCTAT
AAGCAATAATAAAGTTGCTATTCTTCTATTTCCATGCTCATAATTAAGTTTATATTGTTGCGTTATAAATTCAATGGTTA
TTAAATATGAGATTCATAGGAAAACCCAGTGGCATGTGTGAAAAGATAAACACCAATCAGATCCCCAGTGTCAGTGTCGT
AGATAACGGGTACCCGCTAAACCCTCCAGCATGTGGGCCGTGTCGACTCATTAATTACCGGGAGTACGCCAAGATGTCAA
CAGAACCTGAAGCTCGTACAAGACCCCTCTCAATGGATTCAAGTAAGGCAAGGCTCTGGAAGCCTTCCAGTTACATATTG
AAAAGCATCACCCTTGCATTGACTCTAATGAGGAGAGCATCAAGACATCCACACCCATCCTGCGAACGCCCAAAGAATGG
GCTTTC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr6B_1
GAACCTAGGGAGGAGCAACACTACACTTCCCGTTCCAGGGGGGATTTGTAGCTCTCTATCCACCAAATAAACGACACAGA
AACTAGGAGTAGGGTGTTATGCAACCATGCGGCCTAACCCTGGGTAGATCATAGTGTCTTTCTACTCTTTTCTCGTTGAG
ATAGATCCACGCCTTGCACCCCGTCTATGAATCGACAAGGGACGCCTCCAATCCTTGGTGTCTTGATTGTGTTCTGCACA
CGCATGAAGACACCCGGTTACACTCTAAAGCCTTGAGTATCCACAAATCTAGGCATCATGTCCTTGTTTCCTAGCTTCCA
ACCTTCACTCACTCTTGATCTAACACGTGTCAATCCCCACACACACCCATGCATCCTCCACTAACGGTACAACCAACTAG
TTGTGTCCTTATTTGTATTGCCATAA--TCAACACTATACATTTTATACTTCCCAAATATAATGTTTATATGTTGACAAT
CGAGTCATAAGAAAATATGACCTACTAAGTAGTAATATGTGGCCTTGTGCCATTGATCAAAACAAAA-ATATGGTCAACA
--ATTAGGTGGCAACTGTCTGAGGTTG-TTGAAAATCCATATGCACATGT-CAACAACTTTGGTAAGTATAATTTAAATG
TTAACTTTATTAAGGTTCAAAAATTTGGTAGTTCATATCTTCT-TTCAAAACGACTACATGCAGACAAAGCGACATCTTG
TAGATACAATATTGAAACTGTATCCTACAAGTAGAAATTAAATGTCTACATTATTATACTCCATAAAATTGTTGATTCAT
GTC--TTTTAGAACCAC-TTGCAAGCAGATATAGCCACATCTTCTAGATATAATAT-AATAATTGCAACATGCATATCTT
CTAGATAGAATGACAT-ATCTTATCATTAAGTTTTTTCAGGTCTCGTCTTTCTAGGCTATAAGATACGGCG-TAGCCTAT
CTGGGTGTGCATCTACTC-------GCTTAATTGATTTCATAACTATTCATTCTTGAAGACATGGGAGTCATCAAAATGC
TAAGCCTATTATGCCTGCTACTGCTCATGCCACTTCTTTTAGTTCTTGGTAAAGGTTGTTTGAAAATTTCAGATA---AA
CAAGGATCTTCCTTCATGCAATATTTTAC--ATTTCCAAGTCATATGTGATATTCATACTCCAGGCTACTTCTTTCTTTC
T-TTCTTGTTTCTTCGTGGAAGATTGTAGGATC-TAATTTTT--T-GTGCTCCATATCGTGTGGTTGTTTTGTAGGCTTG
GAAGCCAAGACTTGCGTTGAACATAGCAGGACCTATCATACT-ATATCATGCAAGGTGGATCCATGTGTTGAGGCCTGCC
ACAAGGAGGGATTTACTTATGGGTTCTGCTCCCCCTAC---CCCCTTATAATAGTTTGTTTCTGCGTAAAAAAATGTTGA
ATAAAAATCATGCTGCGACTATCATAGGATATGTGATGTAACAAAT-AATAAGGTTATGTAGTATGATGAATTGAGAATG
GGCAATGACAGAAGTTGAGTGTCTACCAAATATTCCTTACC-TTTTGGCTTAAAGTACAAATAGGACTACTCACAATGCA
GGCACATCAAACATATGCCGCAATGCTAAAAAATCACATGCTAGA---AATGTGAGATGTGGTTACGCTGATTACCATAC
ACCTACAAAAAAAAT-TCCCTAACATCTGCTCTAGCGTATGTCCTTCCCTTTGGTGATGCTTGTTAAAAATATGGCCTAT
AAGCAATAATAAAGTTGCTATTCTTCAATTTCCATGCTCATAATTAATTTTATCTTGTTGTGTTATAAACGCAATGGTTC
TTAAATATGGGATTCGTAGGAAAATCCAGTGGCATGTGTGAAAAGATAAACACCAATCAGATCCCCAGTGTCAGTGTCAC
AGATAATGGGTACCCGCTGAACACTCCAGCATGTGGGTCGTGCCGACTCATTAATTACCGGGAGTATGGCGAGACGTCAA
TAGAACCTGAAGCTCGTACAAGACCCCTCTCAATGGATTCAAGTAAGGCAAGGCTCTGGAAGCCTTCCAGTTACATATCG
AAAAGCATCACCCTTGCATTGACTCCAACGAGGAGAGCATCAAGGCATCCGCGCCCATCCCGTGAATGCCCGATGAATGG
GATTCCGCGAAGAGGTCGT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr6A_418
TGCCAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------TAATTTCAACAACAAACAATTGTTCTTTACAAA-TAT-ATTTTTATATGTTAACTAT
AGATTTGTAAGAAATTATGGTCTATTAATAGGTAATATTCTCCCTTGGGCGATGGATCAAAAACAAA-ATATCTTGTTCA
ATATTAGGTGGTGACGATCCGATCATCTTAGAAAATCAATCTACCTTTGTGCAACAACTTTAATAGGTAGAATGTAAATG
GGTACATTATTATACTCAATAATGTTTTTGGTTCATATCCTC-ATTAAAATGGATTTAATGCATATAAGGCCACATATTC
TACATAGAACATCACAATTGTAGTGTGCATGGAGATGTTAAATTTCTATATTATTATACTCAAAAAATATGTTGGTTTAT
ATCCTC---TGGAGCGGATTTCTCACAGATATAGCCACATCTTTCAGATAGAATATCAAAAATTCCAACATGCAGATCTT
CTAGATAGCATCACACAATCTTATATTTGACTATTTTTAGGTCTCATGTTTCCTTGTTATAAGATATGGCA-TAGCCT--
TTTGATGTGCATCCATTCCA--CTCGTCTACTTGCTTTTGTGATTTTTCATTCCTGAAGAAATGGGTGACATCAAGGTGC
CAAGCCTATTGTGCCTTCTACTACTCATGCCACTTCTTTTAGTTCCTTCTAAGTATTGTCTGAAAACTTCGCATGATGAA
TGAGGCACTTCCTAAATGTGTT-CTAAAAGAATTTCCCACTAATATGTGGAAT-CCTACTCCATGCAAACTAATT----T
T-ATCTTCTTTTTGGATGGAACTTCATAGGATATGAGTCCTT--T-GTAAACCATTTTTTGTGGTTGTTTTGTAGGCTCA
GAAGCCAAGACCTGCGAGGTAGCTAGCAGGACCTATATGACA-ATAGCATGCAGGGTGGATCCATGTGCTAAAGCCTGCC
ACAAGGAGGGCTTTACTAAGGGTTTATGTTACATATACCCACCATTTACAATCATTTGTATCTGCGAAAAAGAGTGTTAA
ACAAAGAAAAAGTTGCAGTTCGCATAGGATGTGTGATGTAACAAAT-AATAAGGCTGGGTAGTATGATGAATTGATAATG
AGCAATGACAGAAGTTGAGTCCATCACAAATAATCCTTAC---TTAGTCTTAAAGTACA---------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr6A_460
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------ATTTTTATATGTTAACTAT
CAAGTTGTAAGACATGATGGCCTATTAATAGGTAATATTCTCCCTTGTGTGATGGATCAAAAACAAA-ATAGCTTGTCCG
ATATTAGGTGGTGACGATCCGATCATCTTAGAAAATCAATCTGCATTTATGCAACAACTTTAATAGGTAGAATGTAAATG
TGTGCATTATTATACTCAACAAAGTTTTTGGTTCATATCCTCTATTAAAATGGATTTAATGCATATAAAGCCACATCTTC
TACATAGATCATCACAATTGTAGTGTGCATGGACATGCTAAATTTCTTTATTATTATACTCCATAAATATGTTGGTTTAT
ATCCTCCTTTGGACCAGATTTCTTGCTGATATAGTCACATCTTTCAGATAGAATAT-CAAAATTCCAACATGCATATCTT
CTAGATAGCATCACACAATCTTGTATTTGACTATTTTTAGGTCTCATCTTTCCATGTTATAAGATATCGCG-TAGCCTAT
TCTGATGTGCATCTATTCCATTCTCGTGTACTTGCTTTTGTGATTTTTCATTCCTGAAGAAATGGGCGACATCAAGGTGC
CAAGACTGTTATGCGTTCTACTACTCATGCCACTTCTTTTAGTTCCTTGTAAGTATTATCTGGAAACATCACATGAAGAA
CAAGGCACTTCCTAAATGTG-T-CTAAAAGAATTTCCCACTAATATGTGGAATTCCTACTTCATGCAAACTAATT----T
T-ATCCTCTTTTTGGATGGAACTTCATAGGATCTTAATCTTT--T-GTACACCATATTATGTGGTTGTTTTGTAGGCTCA
GAAGCCAAGACCTGCGAGGTAGCTAGCAGTACCTATCTGACA-ATAGCATGCAGGGTGGATCCATGTGCTAAAGCCTGCC
ACAAGGAGGGTTTTACCAAGGGGTTATGTTACATATACCCACCATTTACAATTCTTTGTATCTGCGAAAAAGAGTGTTGA
ACAAAGAAAACGTTGCAATTCGCGTAGGATGTGTGATGTAACAAAT-AATAAGGTTGGGTAGTATGATGAATTAATAATG
AGCAATGATAGAAGTTGAGTCTATACCAAATATTCCTTAC---TTAGTCTTAAAGTACAACTAGGAATGCTCA-------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr6A_460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATTTTTATATGTTAACTAT
CAAGTTGTAAGACATGATGGCCTATTAATAGGTAATATTCTCCCTTGTGTGATGGATCAAAAGCAAA-ATAGCTTGTCCG
ATATTAGGTGGTGACGATCCGATCATCTTAGAAAATCAATCTGCATTTATGCAACAACTTTAATAGGTAGAATGTAAATG
TGTGCATTGTTATACTCAATAATTTTTTTGGTTCATATCCTCTATTAAAATGGATTTAATGCATATAAAGCCACATCTTC
TACATAGAACATCACAATTGTAGTGTGCATGGAAATGCTAAAGTTCTTTATTATTATACTCCATAAATATGCTGGTTTAT
ATCCTCCTTTGGAGCGGATTTCTTGCTGATATAGTCACATCTTTCAGATAGAATAT-CAAAATTCCAACACACATATCTT
ATAGATAGCATCACACAATCTTGTATTTGACTATTTTTAGGTCTCATCTTTCCATGTTATAAGATATCGCG-TAGCCTAT
TCTGATGTGCATCTATTCCATTCTCGTGTACTTGCTTTTGTGATTTTTCATTCCTGAAGAAATGGGCGACATCAAGGTGC
CAAGACTGTTATGCGTTCTACTACTCATGCCACTTCTTTTAGTTCCTTGTAAGTATTATCTGGAAACTTCACATGAAGAA
CAAGGCACTTCCTAAATGTG-T-CTAAAACAATTTCCCACTAATATGTGGAATTCCTACTTCATGCAAACTAATT----T
T-ATCCTCTTTTTGGATGGAACTTCATAGGATCTTAATCTTT--T-GTACATCATATTATGTGGTTGTTTTGTAGGCTCA
GAAGCCAAGACCTGCGAGGTAGCTAGCAGTACCTATCGGAAA-ATAGCATGCAGGGTGGATCCATGTGCTAAAGCCTGCC
ACAAGGAGGGCTTTACCAAGGGGTTATGTTACATATACCCACCATTTATATTTCTTTGTATCTGCAAAAAAGAGTGTTGA
ACAAAGAAAACATTGCAATTCGCGTAGGATGTGTGATGTAACAAAT-AATAAGGTTGGGTAGTATGATGAATTAATAATG
AGCAATGATAGAAGTTGAGTCTATACCAAATATTCCTTAC---TTTGTCTTAAAGTACAACTAGGAATGCTCA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr6A_460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATTTTTATGTGTTAACTAT
CAAGTTGTAAGACATGATGGCCTATTAATAGGTAATATTCTCCCTTGTGTGATGGATCAAAAACAAA-ACAGCTTGTCCG
ATATTAGGTGGCGATGATCCGATCATCTTAGAAAATCAATATGCATTTATGCAACAACTTTAATAGGTAGAATGTAAATG
TGTGCATTATTATACTCAATAAAGTTTTTGGTTCATATCCTCTATTAAAATAGATTTAATGCATATAAAGCCACATCTTC
TACATAGAACATCACAATTGTAGTGTGCATGGACATGTTAAATTTCTGTATTATTATACTCCATAAATATGTTGGTTTAT
ATCCTCCTTGGGAGCAGATTTCTCGCTGATATATTCACATCTTTCAGATAGAATAT-CAAAATTCCAACATGCATATCTT
CTAGATAGCATCACACAATCTTGTATTTGACTATTTTTAGGTCTCATCTTTCCATGTTATAAGATATCGCG-TAGCCTAT
TCTGATGTGCATCTATTCCATTCTCGTGTACTTGCTTTTGTGGTTTTTCATTCCTGAAGAAATGGGCGACATCAAGGTGC
CAAGACTGTTATGCGTTCTACTACTCATTCCACTTCTTTTAGTTCCTTGTAAGTATTATCTGGAAACTTCACATGAAGCA
CAAGGCACTTCCTAAATTTG-T-CTAAAAGAATTTCCCACTAATATGTGGAATTCCTACTTCATGCAAACTAATT----T
T-ATCCTCTTTTTGGATGGAACTTCATAGGATCTTAATCTTT--T-GTACACCATATTATGTGTAT-TTTTGTAGGCTCA
GAAGCCAAGACCTGCGAGGTAGCTAGCAGTACCTATCTGACA-ATAGCATGCGGGGTGGATCCATGTGCTAAAGCCTGCC
ACAAGGAGGGCTTTACCAATGGGTTATGTTACATATACCCACCATTTACAATTCTTTATATCTGCGAAAAAGAGTGTTGA
ACAAAGAAAACGTTGCAATTCACATAGGATGTGTGATGTAACAAAT-AATAAGGTTGGGTAGTATGATGAATTGATAATG
AGAAATGATAGAAGTTGAGTCTATACCAAATATTCCTTAC---TTAGTCTTAAAGTACAACTAGGAATGCTCA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr6D_460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATTTTTATATGTTAACTAT
CAAGTTGTAAGAAATGATGGCCTATTAATAGGTAATATTCTCCCTTGTGCGATGGATCAAAAACAAA-ATAGATTGTTCG
ATATTAGGTGGTGATGATCCGATCATCTTAGAAAATCAATCTGCATTTGTGCAACAACTTTAATAGGTAGAATGTAAATG
TGTACATTATTATACTCAATAATGTTGTTGGTTCATATCCTCTATTAAAATGGATTTAATGCATATAAAGCCACATCTTG
TACATAGGACAACACAATTGTAGTGTGCATGGAGATGTTAAATTTCTATATTATTATACTCCATAAATATGTTGGTTTCT
ATCTTCCTTGGTAGCGGATTTCTCGCAGATATAGCCACATCTTTCAGATAGACTAACAAAAATTCCAACATGCATATCTT
CTAGATAGCATCACACAATCTTGTATTTGACTATTTTTAGGTCTCATGTTTCCATGTTATAAGATATGGCA-TATCCTAT
TTTGATGTGCATCTATTCCATTCTCGTGTACTTGCTTTTGTGATTTTTCATTCCTGGAGAAATGGGCGACATCAAGGTGC
CAAGCCTGTTATGCCTTCTACTACTCATGCCACTTCTTTTAGTTCCTTGTAAGTATTGTCTCAAAACTTCACATGAAGAA
CAAGGCACTTCCTAAATGTG-TTCTAAAAGAATTTCCCACTAATATGTGGAATTCCTACTCCATGCAAAGTAATT----T
G-ATGTTCTTTTCAGATGGAACTTCATAGGATTTGAGTCTTT--T-GTACACCATTTTCTGTGGTTGTTTTGTAGCCTCA
GAAGCCAAGACCTGCGAGGTAGCAAGCAGGACCTATATGACA-GTATCATGCAGGGTGGATCCATGTGCTAAAGCCTGCC
ACAAGGAGGGCTTTACCAAGGGGTTATGTTACATATACGCACAATTTAAAATCATTTGTATCTGCCAAAAAGAGTGTAAA
ACAAAGAAAAAGTTGCAATTCGCATAGGATGTGTGATGTAACAAAT-AATAAGGTTGGGTAGTATGATGAATTGATAATG
AGCAATGACAGAAGTTGAGTCCATACCAAATATTCCTTAC---TTAGTCTTAAAGTACAACTAGGAATGCTCACATGCA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr6D_460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATTTTTATATGTTAACTAT
CGAGTTGTAAGAAATGATGGGCTATTAATAGGTAATATTCCCCCTTGTGCGATGGATCAAAAACAAA-ATAGCTTGTTCG
ATATTAGGTGGTGATGATCTGATCATCTTAGAAAGTCAATCTGCCTTTGTGCAACAACTTTAATAGGTAGAATGGAAATG
GGTACATTATTATACTCAATAATGTTTTTGGTTCATATCCTCTATTAAAATGGATTTAAAGCATTTAAAGCCACACCTTC
TACATAGAACATCACAATTGTAGTGTGCATGGAGATGTTAAATATCTATATTATTATACGCCATAAATGTGTTGGTTTAT
ATCCTCCTTGGGAGCGGATTTCTCGCAGATATAGCCACATCTTTCAGATAGAACATCAAAAATTCCAACATGCATATCTT
CTAGATAGCATCACACAATCTTATATTTGACTATTTTTAGGTCTCATGTTTCCTTGTTATAAGATATGGCG-TAGCCTAT
TTTGATGTGCATATATTCCA--CTCGTGTACTTGCTTTTGTGATTTTTCATTCCTGAAGAAATGGGCGACATCAAGGTGC
CAAGCCTGTTATTCCTTCCACTTCTCATGCCACTTCTTTTAGTTCCTTGTAAGTATTATCTGAAAACTTCACATGAAGAA
CAAGGCATTTCCTAAATGTG-TTCTAAAAGAATTTCCCACTAAGTAGTGGAATTCCTACTCCATGCAAACTAATT----T
T-ATATTCTTTTTGGATGGAACTTCATAGGATC-TCAGTCTT--TTGTAAACCGTTTTCTATGGTTGTTTTGTAGGCTCA
GAAGCCAAGACCTGTGAGGTAGCTAGCAGGATCTATACGACA-ATAGCATGTAGGATGGATCCATGTGCTAAAGCTTGCC
ACAAGGAGGGCTTTACCAAGGGGTTATCTTACATATACCCACCATTTACAATCATTTGTATCTACCAAAAAGAGTGTTAA
ACAAAGAAAAAGTTGCAATTCGCATAGGATGTGTGATGTAACAAAT-AATAAGGTTGGGTAGTATGATGAATTGATAATG
AGCAATGATAGAAGTTGAGTCCATAGCAAATATTCCTTAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr4A_628
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTAAATG
TCAACATTATTATACTCCATAAATTTGGTGATTCATGTCTTCT-TTCAGAATGACTTCCTGTAGACAAAGCGACATCTTG
TAGATGCAATATTAAAATTGTAGCCTGCAGGTAGAAGTCAAATGTCTACAGTATTATACTCCATAAATTCGGTGGTTCGT
GTCTTATTTAGAAAAAC-TTCCATGGAGATATAGCCACATCTTCAAGATGTAATAT-AAGAATTGCAACATGGATATCTT
CTAAATAGAATCACAT-ATCTTATCTTTGACTTTTGTTAGGTCTTATCTTTTTAGGCTATAAGATATGGCA-TAGCCTAT
CTCGATGTGCATTTATTCCATGCTCGCTTATTTGCTTTCGTGAATATCCATTGCTGAAGACATGGGAGTCATCAAAGTGC
CAAGCCTATTATGCATGCTACTGCTCATGCCACTTGTTTTAGTTCCTGGTAAAAATTATTTGAAAATTACACATGAAGAA
CAAGGCACTTCCTTCATGCAATCTTTTAC--ATTTCCCGGTCATATCTGATATTTATACTCCATGCTACTTCTTT----C
T-TTCTTGTTTCTTCATGGAAGATTGTAGAATC-TAATTTTGTGA-GTGCACCATATCATGTGATTGTTTCATAGGGTCG
GAAGCCAAGACCTGCATTGTACATAGCAGGACCTACCAGACTAATATTATGCAAGGTGGATCCATGTGTTGAGGCATGCA
ACAAGGAGGGATTTACTGCAGGGTTCTATGGACCCTA----CCCCGTTTAATAGTTTGTTTTTGACAAAAAGAATGTTGA
TAAAA-ATTATGCTGCAACTATCGT----------ATGTAACAAAT-AATATGCTTATGTAGCATGATGAA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr4A_628
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TTAAATG
TCAACATTATTATACTCCATAAATTTGGTGATTCATGTCTTCT-TTCAGAATGACTTCCTGTAGACAAAGCGACATCTTG
TAGATGCAATATTAAAATTGTAGCCTGCAGGTAGAAGTCAAATGTCTACAATATTATACTCCATAAATTCGGTGGTTCGT
GTCTTTTTTAGAAAAAC-TTCCATGGAGATATAGCCACATCTTCAAGATGTAATAT-AAGAATTGCAACATGGATATCTT
CTAAATAGAATCACAT-ATCTTATCTTTGACTTTTGTTAGGTCTTATCTTTTTAGG--------------------CTAT
CTCGATGTGCATTTATTCCATGCTCGCTTATTTGCTTTCGTGAATATCCATTGCTGAAGACATGGGAGTCATCAAAGTGC
CAAGCCTATTATGCATGCTACTGCTCATGCCACGTGTTTTAGTTCCTGGTAAACATTGTTTGAAAATTACACATGAAGAA
CAAGGCACTTCCTTCATGCAATCTTTTAC--ATCTCCCGGTCATATCTGATATTTATACTCCATGCTACTTCTTT----C
T-TTCTTGTTTCTTCATGGAAGATTGTAGAATC-TAATTTTGTGA-GTGCACCATATCATGTGATTGTTTCGTAGGGTCG
GAAGCCAAGACCTGCATTGTACATAGCAGGACCTACCAGACTAATATTATGCAAGGTGGATCCATGTGTTGAGGCATGCA
ACAAGGAGGGATTTACTGCAGGGTTCTACGGACCCTA----CCCCATTTAATAGTTTGTTTTTGACAAAAAGAATGTTGA
TAAAA-ATTATGCTGCAACTATCGT----------ATGTAACAAAT-AATATGCTTATGTAGCATGATGAA---------
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>chr2A_900
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--------------------------------TTTTTTAGGTCTCATCTTCCCAGGCTATATGCTATATATCTGGCCAAT
TTTGATGTGCATCTCTTCCAAGCTTTCTTTTTG------------ATTGTTTTCTGAAGACGTGGGAGTTGTCAAGGTGC
CATGCCTATTATGCCTGCTACTGCTCATGCCTCTTCTTTTAGTTCCAGGTAAGCGTTGTCTGAAAAATCCATAAGAAGAA
AAAGGCACTTCCTCGGTGCACTTTTATAC--TGTTGCCACTCATATGTGAAATTTTTAATCCATGCTACTTCTTT----C
TGTTCTTGTTTCTATGTGGAACGTCGTATGATC-TAATTTTTTAT-GTACATCATATTGTGTGGATGTTTTGTAGGCTTG
GAAGCCGAGACCTGCACCTATGAGTGCAGGACCTATGACACT-CTTCTATGCAAGACGAGTAAATGTGTTGAGGCCTGCC
ACAAGGAGGGCTATACCAGTGGGTTTTCTTACCTATTC---CCCAA------AATTTGTTACTGCCAAAAAGAGTGCTGA
ATAAGAAATATCCTGCAATTGTTGTAGGATGTGTGATGTAACAAAAAAATAAGGTTTTGTACTATGATTAATTGATAATG
AGAAATGGCCGAAGTTGCGGCTCGGCCAAACATTCCATACTTTTTTGTCATAAAGTACAAAGATGGATGCTCAAGGTATA
GGAAGTTCTAACACATGTTAAAGTGCTAAAAAATCACATGGTAGCAAGAATTGGAGATGTGATTACTTTGATCACAACCG
TCCACCAATTTCTTTCA---TATCATCTTATCTAGTGTATGTTCTTCCCTTCGGTG------------------------
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---------------------------------------------
>SNPs
-------------------------------------SS----S------------------------------------
--------------------------------------------------------------------S-----------
---------S---------S----------S-------------------------------------------------
-----------S-----------------S-------------------------S------------------------
---------------------------S-------------------------------------S--SS----------
----------------------------S--S------------------------------------------------
--------------------------------------------------------------------------------
------------------S-----------------------------------------S-------------------
----------------------------------------------------------------------S---------
-------------------S------------------------------------------------S-----------
----------------------------------------------------------------S---------------
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-----------------------------------S--------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
----------------------------------------------------------S---------------------
-----------------------------------------------------S-------------------S------
-----------------S---S----------------------------------------------------------
----------------------S---S-----------------------S------------------S----S-----
--------------------------------------------------------S-------------S---------
--S--------------------------------------------------------------S--S-----------
--------------S-S-----------S-----------------------------S----------------S----
---------------S--------------S------------------------S------------------------
------------------------------------------------------S------S------S-----------
---S--------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_270
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---------ACGCCCGGTTACACTCTAAAT--------------------------------------------------
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>reverse_2273
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--------------------------------ATAGCGTGGGAGGAGACCTT----------------------------
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---------------------------------------------
