>input_sequence_81367
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-------------ATGGTCTCGTCAATGAAGCACTGCAGATATCAGGCC---GAGGTGC------CATTGTCCCTCTCGC
TCTCCCTCGGCGCCGTGACTGGACGGAACAAGAAGACACGCC---GCAGTGCAGACGGCGAGTTCGTGTGCAAGACGTGC
AGCCGCTCCTTCCCGTCGTTCCAGGCGTTGGGCGGACACCGGACAAGCCACCTGCGCGGCCGCCACGGGCTCGCGCTCGG
ACTCGCCGCCGGGAC---CGATCTGCCGGCGACCAAGAAGGCCACGGAGCAGAAGCAGGCGCACCAGTGCCACGTCTGCG
GGCTCGAGTTCGAGATGGGGCAGGCGCTGGGCCGCCACATGCGTCGGCACCGCGAGCAGGAGGCCGCCACCACGGCGCAT
GCGCCTCCCGTTCTGCTACAGCTCTTCGTCTAG-----------------------------------------------
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-------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G478000
CTTTTTTATTTAACACTGAAAAAGT--TTTTTTCCTATTTGACACAAGTTTTAAATTTTATTTTTCATATGACATTTTCG
TCTATTTTGAGCCTAAATGACATTTGAAAAGACTCTTTTGTCCCTCATATGGTATGTGTGTGGGGGGCAATAGCGCGCGC
ACACAGCATCAG-TGCGAGGGCAGAAACACACACGCAACAACACATACACATGCACCAACACACAACGC--ACGCG--CA
CACACATGCAACAACGCGCGCGCGCA------------------------------------------------------
----------------------------------------------------------TGCACACACACGCAGCAGCACA
CACGCAGGCAGCACATAGGCACACAACCGCACACGCACACGCGCGCGCACGTACACACGTAGTAGCAAACACACGCAGCA
GCACACAT-------GCA---GC---AGCAGCACACACGCAGGCAGCACATAGGCACACAACAACACAC----ACATACA
CGCA--CGCACGTACACACGCTGCAGCAAACACACACGCAGCAGCAA--------ACACACAGGCA---GCAGCGCACAT
GCACACACACATGCAGCAGCAGCACACATGTGCGCGTGCACCCACACACGCAACAGCACACGCGCGC--GTGCACACACA
TATCACATGAAGGGCAAAATCGTCTTTTCAGGTGTCATTTAGGCTTAAAATGGACAAAAATGTCGTATAGGGAATAAAAT
TTAGGACTAGTGTCAAATAGAAAAGAAAATTTTTT-CCAGTATCAAATAAGGAATCAAATTTTAAGACAGTATCAAATAA
GGAATTTTTCTCCAAGTCGTGCCTCCTACC-TCAGACGTCAAGAGCGACGTGGTGTACACGTGACGCACCT------TGC
TGCTATCTGCCAGTAGTAGTACTCCATCC--ATAGAATAAAAGGCCAAAAATCCACGGAACCGAGCCACATCCACAGC--
---CAATTCCC--GAGCTCTTCCGAGTGACTGAATCCATTCCACATCTCA---------TCACGCCCATCGTTTCACAAT
TCGC---------ACAGACGCGCCAACTCTCGTTGAGCCAGCCCATA---TCGCATTTGCCT------------------
------CGCGCCCATGGTCTCGTCAATGAAGCACTGCAGATATCAGGCC---GAGGTGC------CATTGTCCCTCTCGC
TCTCCCTCGGCGCCGTGACTGGACGGAACAAGAAGACACGCC---GCAGTGCAGACGGCGAGTTCGTGTGCAAGACGTGC
AGCCGCTCCTTCCCGTCGTTCCAGGCGTTGGGCGGACACCGGACAAGCCACCTGCGCGGCCGCCACGGGCTCGCGCTCGG
ACTCGCCGCCGGGAC---CGATCTGCCGGCGACCAAGAAGGCCACGGAGCAGAAGCAGGCGCACCAGTGCCACGTCTGCG
GGCTCGAGTTCGAGATGGGGCAGGCGCTGGGCCGCCACATGCGTCGGCACCGCGAGCAGGAGGCCGCCACCACGGCGCAT
GCGCCTCCCGTTCTGCTACAGCTCTTCGTCTAGCTCTAGCTTGTTCGATATGGATACACATCAAGTGCGGGTTTACTCGT
TCGTCTATATGCCGTTGGTCTTGGTTCATTCTTTCATTTTTCTACGCTTATGTAAATATTTACGACTCGTTTATTCGTTT
ATTATATATATAGAGACTATATGGGCGTTGATTTCTGGAACATGGTTCCACGGAACCCCTTATGAATAGTCCATTCTGAA
AAAAACACTAAAAAAATTAGGATCCTGATAAGTGCCGAATGTCAGATACAAGCATATGACAATTCAGAACATTTTTAACA
CCAAGTTTAATGACGTGAGGATGACAACTTTAGTTGCCAAGTATGAGAGCTTTCATGCTTTAATTTATTTTTGCCAGAAA
ATTGCCGTGTGACACTGAAAATTGCCACCAGAAAACATCAGCGCCAGAGTGCCACACACCTGACTTGTGAGACTAATTAT
TTGGGAAAATTTAAAATACCTGATATATTTTTCGTAACGTACATGGTCAACTGATATACTCGCATATGAAGTTTCATGAA
GAAATGACATTTGTGGTAATCTCGAATATTTTTTGGCATCTCCCGGAAAAAAGATTATTTTTTGGTAAAATCAAAGCTAT
ATTCGGAAACACTATCCGAAGCTATTTTCTTCACTATGGAACACCCAGGTGTCATTTCAGTAGGGATTTTCCCTACTGTA
GTTGGTCAAAAAAAGTTTGATACCCAAAATTTTTAGGTTTCTTAAAAAGATTCCTAGTTATGTTTTAAAAAACTTAGTAT
TCACATTGATGTGTGTGGAACGATAGTCACCTATATGTATATGTTTTTTCTTGCGGGTGACCTATATGTATATGTTACAT
TGTTTTTTTCCAGAGACTATATATGTTACACTGCCCAAGTTAAGTATCCGGCGTGCACGCATGCGTATCCAAAGACCCGT
GCAAACCAACATGTATTTTGTTAGTTAAGCATCAATCTCTTCTTCCTACATGCACTATATTTCCTAAAAAGAT
>chr6A_1
CTTTCTTATTTGACATTGGAAAAAAAATTCTTCCCTATTTGAAACAAGTTTTAAATTTTATTTCCTATATGACATTTCCG
TCCATTTTGAGCCTAAATGACACTTGAAAAGACTTTTTTGCTCCTCATATGGTATGTGTGTGGGGGGCAATAGCGCACAC
ACGCAACATCAGGTGCGAGGGCAGGAGCACACACGCAACAACACATACACATGCACCAACACACA---C--ACGCG--CA
CACACACGCAACAACACGCACGCGCACGTGCACAC--ACA--CACGCAAACACACGCACGCGCACGTGCACACACACACA
TACACACGC--ACACACACGCC--------------GCAACA------CACATGCACGCGCACACACACGCAGCAACACA
CACACACA-------------CATA----------CACA-----------------------------------------
-CACACAC-------ACACACGGAATAGCAGCACACACGCAGGCAGCACATAGGCACGCAACGGCACAC----ACAC---
-GCGCGCACGT------------------ACACACGC--A-----------------------------GCAGCACACAT
GCACACACACATGCAGCAGCAGCACACATGTGCGCGTGCACCCACACACGCAACAGCACACACGCGC--GCACACACACA
TACCGCATGAGGGGCAAAATCGTCTTTTCAGGTGTCATTTAGGCTTAAAATGGACGGAAGTGTCGTATATGGAATAAAAA
TTAGGACTGGTGTCAAATAGGGAAGAAAAACTTTT-TCAGTGTCAAATAAGGAACTAGATTTTAAGACAGTGTCAAACAA
GGAATTTTCTCT--------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr5A_6
-----TTATTTGACACTGGAAAAGTTTTTCTTCCCTATTTGACACAAGTTCTAAATTTTATTCCCTATATGACATTTCCG
TCCATTTTGAGCCTAAATGACACATGAAAAGATTCTTTTGCCCCTCATGTGGTATGTGTGTGAGGGGCAATAGCGCACGC
ACGCAGCATCAG-TGCGAGGGAAAGAGAACACACGCAGCAACACATACACATGTACCAACACACA---CGCACGCG--CG
CACACACGCAACAACACGCACGCGCACGTGCACACACACA--CACGCAACAACATGCACGCGCACGTGCACAC-------
-AC----------------ACACACGCACACACGCGGCAACA------CACATGCACGCGCACACACACGCAGCAACACA
CACGCACACAGCACACACACAT--------------ACA-----------------------------------------
-CACACAC-------GCA---GC---AGCAGCACACACACAGGCAACACATAGGCACGCAACAACACAC----ACACACA
CGCGCGCGCACGTACACACGCAGTAGCAAACACACAC--T-----------------------------ACAGCACACAT
GCACACA---------------CACACATGTGCGCGTGCACCCACACACGCAACAGCACACACGTGC--GCGCACACACA
TACCGCATGAGGGGCAAAATCGTCTTTTCAGGTGTCATTTAGGCTTAAAATGGACAGAAGTGTCGTATAGGGAATAAAAT
TTAGGACTAGTGTCAAATAGGGAAGAATAACTTTT-CCAGTGTCAAATAAGGAACCAGATTTTAAGACAGTGTCAAATAA
GGAATTTTCTC---------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr5A_6
-----TTATTTGACACTGCAAAAGTTTTTCTTCCCTATTTGACGCAAGTTCTAAATTTTATTCCCTATATGACATTTCCA
TCCATTTTGAGTCTAAATGACACCTGAAAAGACTCTTTTACCCCTCATGTGGTATGTGTGTGAGGGGCAATAGCGCACAC
ACGCAGCATCAG-TGCGAGGGCAGGAGCACACACGCAGCAACACATACACATGCACCAACACACA---CGCATGCG--CA
CACACACGCAACAACACGCACGCGCGCGTGCACACACACA--CA------------------------------------
------------------------------------GCAACA------CACATGCACGCGCGCACACACGCAGCAACACA
CACGCAGGCAGCACATAGACACGCAACAGCACGCGCGCA-----------------------------------------
-CGCACAC-------ACACACGC---AGCAG----CACGCAGGCAGCACATAGGCACGCAACAGCACGC----ACACACA
CACGCGCGCATGTACACACGCAGTAGCAAACACACACGCAGCAGCACACATGCACACACACATGCAGCAGCAGCACACAT
GCACACACACATGCAGCAGCAGCACACATGTGCGCGTG-----ACACACGCAACAGCACACACGTGC--GCGCACACACA
TACCGCATGAGGGGTAAAATCGTCTTTTCAGATGTCATTTAGGCTCAAAATGGGCGAAAGTGTCGTATAGGGAATAAAAT
TTAGGACTAGTATCAAATAGGGAAGAAATTTTTTTTCCAGTGTC-AATAAGGAACCAGATTTTAAGACAGT---------
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>chr2A_6
-----TTATTTGACACTGGAAAAGTTTTTCTTCCCTATTTGACACAAGTTCTAAATTTTATTCCCTATATGACATTTCCG
TCCATTTTGAGCCTAAATGACACATGAAAAGACTCTTTTGCCCCTCATGTGGTATGTGTGTGAGGGGCAATAGCGCACGC
ACGCAGCATCAG-TGCAAGGGCAAGAGAACACACGCAGCAACACATACACATGTACCAACACACA---C--ATGCG--CA
CACACACGCAACAACACGCACGCGCACGTGCACAC--ACA--CACGCAACAACATGCACGCGCCCGTGCACAC-------
-AC----------------GCA--------------GCAACA------CACATGCACGCGCACACACACGCAGCAACACA
CACGCACGCAGCACACACACAC--------------ATA-----------------------------------------
-CACACACACACGCAGCA---GC---AG-----CACACACAGGCAGCACATAGGCACGCAACAGCACAC----ACAC---
-GCGCGCGCACATACACACGCAGTAGCAAACACACAC--T-----------------------------GCAGCACACAT
GCACACACACATGCAGCGGCAGCACACATGTGCGCGTGCACCCACACACGCAACAGCACACACGCGC--GCGCACACACA
TACCGCGTGAGGGGCGAAATCGTCTTTTCAGGTGTCATTTAGGCTCAAAATGGACAGAAGTGTCGTATAGGGAATAAAAT
TTAGGACTAGTGTCAAATAGGAAAGAATAACTTTT-CCAGTGTCAAATAAGGAACCAGATTTTAAGACGGTGTCAAATAA
GGAATTTTCTC---------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr2A_6
-----TTATTTGACACTGAAAAAAAAATTCTTCTCTATTTGACACAAGTTCTAAATTTTATTCCCTATATGACATTTTCG
TTCATTTTGAGCCTAAATAACACATGAAAAGACTCTTTTACCCCTCATGTGGTATGTGTGTGAGGGGCAATAAGGCACGC
ACGCAACATCAG-TGTGAGGGCAAGAGAACATACGCAGCAACACATACACATGTACCAACACACA---CGCACGCG--CA
CACACACGCAACAACACGCACGCGCACGTGCACAC--ACA----CGCAACAACATGCACGCGCACGTGCACAC-------
-ACACACGC--ACACACACGCA--------------GCAACA------CACATGCACGTGCACACACACGCAGCAACACA
CACGCACGCAGCACACACACAT--------------ACA-----------------------------------------
-CACACAC-------GCA---GC---AG-----CACACACAAGCAGCACATAGGCACGCAACAGCACAC----ACAC---
-GCGCGCGCACGTACACACGCAGTAGCAAACACACAC--T-----------------------------GCAGCACACAT
GCACACACACATGCAGCTGCAGCACACATGTGCACGTGCACCCACACACGCAACAGCACAC----GC--GCGCGCACACA
TACAGCATGAGGGGCAAAATCGTCTTTAAAGATGTCATTTAGGGTTAAAATGGACAGAAGTGTCGTATAGGAAATAAAAT
TTAGGACTAGTGTCAAATAGGAA-GAATAACTTTT-CCAGTGTCAAATAAAGAACCAGATTTTAAGACAGTGTCAAATAA
AGAATTTTCTCT--------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr3A_6
-----TTATTTGACACTAGAAAAGTTTTTCTTCCCTATTTGACACAAGTTTTAAATGTTATTCCCTATATGACATTTTCG
TTCATTTTGAGCCTAAATGACACCTGAAAAGACTCTTTTGCCCCTCATGTGGTATGTGTGTGGGGGACAATAGCGCACAC
ACGCAGCATCAG-TGCGAGGGCAGGAGCACACACGCAGCAACACATACACATGCACCAACACACA---CACATGCG--CA
CACACACGCAACAACACGCATGCACGCGTGCA------CACACACGCAACAACACGCACGCACGCGTGCACAC-------
-ACACAC----ACGCACACGCA--------------GCAACACACATGCACACACACACACACACACACGCAGCAACACA
CACACACAGGCAG--------CATA----------CACA-----------------------------------------
-CACACAC-------GCA---GC---AGCAGCACACACACAGGCAGCACATAGGCACGCAATAGCACACACACACAC---
-GCGTGCGCACGTACACACGCAGTAGCAAACACACACGCA-----------------------------GCAGCACACAT
GCACACACACATGCAGCAGCAGCACACATGTGCGCGTGCACCCACACACGCAACAGCACAC----GCACGCGCACACACA
TACCACATTAGGGGAAAAATCGTCTTTTCGGGTATCATTTAGGCTCAAAATGGACGGAAGTGTGGTATAGGGAATAAAAT
TTAGGACTAGTGTCAAATAGGGAAGAAAAAAATTT-CAAGTGTCAAATAAGGAACCAGATTTTGAGACAGTGTCAAATAA
AGAATTTTCTCAAG------------------------------------------------------------------
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-------------------------------------------------------------------------
>chr3A_6
-----TTATTTGACACTGGAAAAGTTTTTCTTCCCTATTTGACACAAGTTCTAAATTTTATTCCCTATATGACATTTCCG
TCCATTCTGAGCCTAAATGACACATGAAAAGACTCTTTTGCCCCTCATGTGGTATGTGTGTGAGGGGCAATAGCGCACGC
ATGCAGCATCAG-TGCGAGGGCAAGAGAACACACGCAGCAACACATACACATGTACCAACACACA---CGCACGCGCACA
CACACACGCAACAACACGCACGCGCACGTGCACAC--ACACACACGCAACAACATGCACGCGCACGTGCACAC-------
-ACACACGCGCACACACATGCA--------------GCAACA------CACATGCACGCG--CACACACGCAGCAACACA
CACGCACGCAGCACACACACACATA----------CACA-----------------------------------------
-CACACAC-------GCA---GC---AGCAGCACACACACAGGCAGCATATAGGCACGCAACAGCACAC----ACAC---
-GCGCGCGCACGTTCACACGCAGTAGCAAACACACAC--T-----------------------------GTAGCACACAT
GCACACACACATGCAGCTGCAGCACACATGTGCGCATGCACCCACACATGCAACAGCACACACGTG--CGCACACACACA
TACGACATGAGGGGCAAAATCGTCTTTAAAGGTGTCATTTAGGCTCAAAATGGACAGAAGTGTCGTATAGGGAATAAAAT
TTAGGACTAGTGTCAAATAGAGAAGAATAACTTTT-CCAGTGTCAAATAAGGAACCAGATTTTAAGAGAGTGTCAAATAA
GGAATTTTT-----------------------------------------------------------------------
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>chr1A_6
-----TTATTTGACACTGGAAAAGTTTTTCTTCCCTATTTGACACAAGTTCTAAATTTTATTCCCTATATGACATTTCTG
TCCATTTTGAGCCTAAATGACACCTGAAAAGACTCTTTTGCCCCTCATCTGGTATGTAGGTGGGGGGCAATAGCGCACAC
ATGCAGGATCAG-TGCGAGGGCAGGAGAACACACACAGCAACACATACACATGCACCAACACACA---CTCACGCGCACG
CACACACGCAACAACACGCATGCGCATGTGCACAC--ACACAT--GCAACAACACGCACGCGCACGCGCACAC-------
-ACACACGC--AACAACATGCACGTGCACATGCAC----ACA------CACACACACGCACACACACACGCAGCAACACA
CACGCACGCAACACACACACAT--------------ACA-----------------------------------------
-CACACAC-------GCA---GC---AGCAGCACACACGCAGGCAGCACATATGCACGCAACAGCACACACACAC-----
---GCGCGCACGTACATACACAGTAGCAAACACACAC--T-----------------------------GCAGCACACAT
GCACACACACATGCAGCAGCAGCACACATGTGCGCG-----CCACACACGCAACAGCACACAC--GC--GCGCGCACACA
TACCGCATGAGGGGCAAAATCGTCTTTTCAGGTGTCATTTAGGCTCAAAATGGACAGAAGTGTCGTATAGGGAATAAAAT
TTAGGACTAGTGTCAAATAGGGAAGAAAAACTTTT-CCAGTGTCAAATAAGGAACCAGATTTTAAGATAGTGTCAAATAA
GGAATTTTCTCC--------------------------------------------------------------------
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>chr5D_741
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------------CAAGTCGTGCCTCCTACC-TCGGACGTCAAGAGCGACGTGGTGTACACGTGACGCACCT------TGC
TGCTACCTGCTAGTAGTAGTACTCCATCT--ATAGAATAAAAGGCCAACAATCCACGGAGCCGAGCCACATCCACAGC--
---CAATTCCTCTGAGCTCTTCCAAGTGACTGAATCCATTCCACATCTCA---------TCTCGCCCATCGCTTCACAGT
TCGC---------ACAGACGCGCGAACTCTCATTGAT------CATA---TCGCATTTGCCT------------------
------CGCGCCGATGGTCTCGTCGATGAAGCACTGCAGAGATCAGGCC---GAGGTGC------CACTGTCCCTCTCGC
TCTCCCTCGGTGTCGTGGCTGACCGGAACAAGAAGATGCGCC---GCAGTGCGGACGGCGAGTTCGTGTGCAAGACGTGC
GGCCGCTCGTTCCCGTCGTTCCAGGCGCTGGGCGGGCACCGGACAAGCCACCTCCGTGGCCGTCATGGGCTTGCCCTCAG
CCTCGCCCAGGGTTCCG------AGCCGGCGACCAAGAAGGCCACGAAGCAGAACCTGGCGCACCAGTGCCACGTCTGCG
GGCTTGAGTTCGAGCTGGGGCAGGCCCTAGGCGGCCACATGCGCCGGCACCGCGAACAGGAAGCCACCACCATGGCGCAG
GCGCCGCCCGTTCTGCTACAGCTCTTCGTCTAGCTCTAGCTGGTTCGATAAGGATAGACATCTAGTGCCGGTTTGCTGGT
TCATCTATGTGCGCGATTGG------------------------------------------------------------
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-------------------------------------------------------------------------
>chr5B_748
--------------------------------------------------------------------------------
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-------------------TGGCTCCAACCTCCAGACGTCAACAACGACGTGGTGTACACGTGACGACGCGCCTGGCTGC
TACCACCTGCGAGTACTAGTACTCCGTCCGTCTAGTATAAAAGGCCAACAATCCACGGAACCCAACCACATCCACAGC--
---CAATTCC---GAGCTCTTCCGAGTCCCTGAATCCATCTCTCATCTCC---------TCCATC-GTTC----------
---C---------ACAGACGCACGAGCTCTCGTCGAG------CAGGCCATACCGGACTG------GCTA----------
--GCCGAGCTCCGATGGTTTCCTCAATGAAGCAGTGCAGAGATGAGGCCCAGGAGGTGC------CCCTGTCCCTCTCGC
TCTCCCTCGGCGTCATGGCCGACCGCAGCAAGAAGCAGCGCCGCGGCGGCGCAGATGGCGAGTTCGTCTGCAAGACGTGC
AGCCGCGCCTTCCCGTCGTTCCAGGCGCTGGGCGGGCACCGGACTAGCCACCTCCGCGGCCGCCACGGGCTAGCGCTCGG
CCTCACTTCAGGGTC---CGATCAGCCGGGGACCAAGAAGACGACGGACCAGAAGCAGGCGCACCAGTGCCACGTCTGCG
GGCTGGAGTTCGAGATGGGGCAGGCGATGGGCGGCCACATGCGCCGACACCGCGAGCAGGAGGCCGCCACCACGGCGCAG
GCGCCGCCCGTTCTGCTCCAGCTCTTCGTCTAGC----------------------------------------------
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-------------------------------------------------------------------------
>chr5A_757
--------------------------------------------------------------------------------
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----------------------------CC-CCAGATGTCAACAACGACGTGGTGTACACGTGAGAACGCGCTTGGCTGC
TACCACCTGCGAGTACGAGTACTCCATCCCTCTAGTATAAAAGGCCAACAATCCACGGAACACAACCACACATCCACGAG
ACACAATTCC---GAGCTCTTCCGACTGACTGAATCCATCTCCCATCTCC---------TCCATC-GTTC----------
---CGCGGATCGCACAGACACACCAGCTCTCGTCGAG------CAGCCCATACCGGACTA------GCTAGCTGCCTGGC
TAGCCCCGTGCCGATGGTTTCCTCGATGAAGCACTGCAGAGATCAGGCCCAGGAGGAGC------CCTTGTCCCTCTCGC
TCTCCCTCGGCGCCATGGCCGACCGCACCAAGAAGCAGCGCCGCGGCGTCGCTGCCGGCGAGTTCGTGTGCAAGACGTGC
AGCCGCGCCTTCCCGTCGTTCCAGGCGCTGGGCGGCCACCGGACCAGCCACCTGCGCGGCCACAACGGGCTCGCGCTTGG
CCTCGCTGCCGGGTC---TGATCAGCCGGGGACCAAGAAGACCACGGACCAGAAGCAGGCGCACCAGTGCCACGTCTGCG
GGCTGGAGTTCGAGATGGGCCAGGCGCTCGGCGGCCACATGCGCCGGCACCGCGAGCAGGAGGCCGCCACCACGGCGCAG
GCGCCGCCCGTTCTGCTCCAGCTCTTCGTCTAGC----------------------------------------------
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-------------------------------------------------------------------------
>chr5D_762
--------------------------------------------------------------------------------
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----------------------------------GACGTCAAGAGAGACGTGGTGTACACGTGACGACGCGCCCGGCTGC
TACCACCTGCGAGTACTAGTACCCCATCCCTCTAGTACAAAAGGCCAACAATCCACAGAACCCAACCACATCCACAGC--
---CAATTCC---GAGCTCTTCCGAGTCCCAGAAGCCACCTCCCATCTCC---------TCCATC-GTTT----------
---CGCAGTTCGCACAGACCTACGTAGTACCATCGAG------CTCG---TACCGGACCAGGACCAGCTA----------
--GCCGCGCGCCGATGGTTTCGTCGATGAAGCACTGCAGAGATCAGGCACCGGAGGTGC------CTCTGTCCCTCTCGC
TCTCCCTCGGCGCCATGGCCGACCGCTCCAAGAAGCAGCGCC---GCGGCGCAGACGGCGAGTTCGTCTGCAAGACATGC
AGCCGCGCCTTCCCGTCGTTCCAGGCGCTGGGCGGCCACCGGACCAGCCACCTGCGCGCCCGCCATGGGCTCGCGCTAGG
CCTCACTGGCGGGTC---CGATCAGCCGGCGACCAACAAGGCGACGGACCAGAAGCAGGCCCACCAGTGCCACGTCTGCG
GGCTAGAGTTCGAGATGGGGCAGGCGCTGGGCGGCCACATGCGCCGGCACCGCGAGCAGGAGGCCGCCACCACGGCGCAG
GCACCGCCCGTTCTGCTCCAGCTCTTCGTCTAG-----------------------------------------------
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-------------------------------------------------------------------------
>chr5A_826
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------CATCA--CTAGTATAAAAGGCCAACAATCCACGGAACCCAACAACATCCACAAC--
---CAA-------------TTCCGAGTCCCAGAATCCACATCTCATCTCC---------TCCATCAGTTC----------
---C-------GCAGAT-CGCACGAACTCTCGTTGAG------CAGCTCATACCGGACTA------GCTAGCT-------
-AGCCGCGCGCTCATGGTTTTGTCTATGAAGCACTGCAGAGATCAGGCCCAGGAGGTGC------CCTTGTCCCTCTCGC
TCTCCCTCGGCGCCATGGCCGACCGCACCAAGAAGCAGCGCCGCGGCGTCGCTGCCGGCGAGTTCGTGTGCAAGACGTGC
AGCCGCGCCTTCCCGTCGTTCCAGGCGCTGGGCGGGCACCGGACAAGTCACCTGCGCGGCCGCCACGGGCTCGCGCTCGG
CCTTGCCGCCGGGATCAATGAGCCGTCGTCGACCAAGAAGACGGTGGACCAGAAGCAGGCGCACCAGTGCCACGTCTGCG
GGCTTGAGTTCGAGATGGGCCAGGCGCTCGGCGGCCACATGCGCCGGCACCGCGAGCAGGAGTCCGCCACCACGGCGCAG
GCACCGCCCGTTCTGCTCCAGCTCTTCGTCTAGC----------------------------------------------
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-------------------------------------------------------------------------
>chr5B_836
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--------------------------------------------------------------------------------
------------------------------------ATAAAAGGCTAACCCTGCACGAT-CCGAGCCACATCCACAGC--
---CAATTCC---GAGCTCTTCCGAGTGACTGCATCCATCTCTCGTCTCCCTCTCCCACTCCATC-GTTC----------
---C-------GCAAAGAACTACGAACTCTTGTTGAG------CAAA---TATCCGACTAGCCACGA-------------
------------CATGGTTTCGTCAATGAAGCATCACAGAGATGAGGCC---GGCGCTTCCTCGTCCCTCTCCCTCTCGC
TGGCCCTCGGCGCCGTGGCCGACCGAAGCAAGAAGATGCGCCGCGGCGGCGTGGACGGCGAGTTCGTGTGCAAGACGTGC
GGCCGCTCGTTTCCGTCATTCCAGGCTCTGGGCGGGCACCGGACAAGCCACCTGCGCGGCCGCCACGGGCTCGCGCTCGG
CCTCGCTGCCGGGTC---CGATAAGCCGGCGACCAAGAAGACCACGGACCAGAAGCAGGCGCACCAGTGCCACATCTGCG
GGCTCGAGTTCGAGATGGGGCAGGCGCTTGGCGGCCACATGCGCCGGCACCGTGACGAGGCGGTCGCCACCACGGCGCAG
GCACCCCCCGTTCTGCTCCAGCTCTTCGTCTAGCT---------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>SNPs
----S------S-----------------S--S------------------------------SSS--------------
--S-------------------S-----------------S-----------------------------------S---
--S---------------------S-S--------------------------------------SSS------------
------S--------S---S------------------------------------------------------------
---------------------------------------------------------------------------S----
------------------S--------S----S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S------S-------------------------------------------------S------------------S---
---S-----------------S-S----------------------S---------------S-----------S-----
-------------------------------------------------------------S--------S---------
--S-------S------------------------------------------------S--------------------
-----------------------------------------S------------S--S-------------S--------
---------SS---------------------------------------------------------------------
-----S----S-------------------------------------S-------------------------------
----------S--------------------------------------------------S---------S------S-
-------------------------------------SSSSSS-------------------------------------
----------------------------------------S---------------------------------------
-----------------S---SS-------------SS------------------------------------------
---------------------------S-------S--------------------------------------------
S----------------------S--------------------------------------------------------
--------------------------------S----------S-----------------------------------S
-----S-----------------------------------S--------S-----S-----S-----S-----S--S--
--S-----S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_228
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ACATGCACCAACACACAACG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>reverse_1992
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TGCCAGAAA
ATTGCCGTGTG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
