>input_sequence_81312
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------------------------------------------------------------------ATGCTGGAGGGCAA
GGCGGTGGTGGAGGACACGGACATGCCGGCGCGGATGCAGGCGGCGGCGACGTCGGCCGCCTCCCGCGCGCTCGACCTCT
TCGACGTCGACGACTGCCGCGCCATCGCCGGCCACATCAAGACGGTGCGTTCCCTC-CCCGTTCCGCCGTCTCCCCCTCT
CTCCGTTGATTGGTTCG-TCGCCGTCGCTGAGGATCCATCGCTTCCGCGCGTGCAGGAGTTCGACCGGCGGTACGGCGTG
GGGTGGCAGTGCGTGGTGGGCGCCAGCTTCGGGTGCTTCTTCACCCACTCCAGCGGCACCTTCATCTACTTCTCCCTCGA
GCGCCTCACCTTCCTCCTCTTCAAGGCCGCCCCCGTCGCCTTCGCGACCTCCTGTGATTCGTCGGCGGTATCTTGA----
--------------------------------------------------------------------------------
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------------------------------------------------
>chr7D_1_TraesCS7D01G056400
ATTACTAGTTTGCAGTGTCACCAAAAAGTACGAATACGCCTCCTATTCCAAAT-CCTAGTTGCCACCAAAGGTGTTCTCC
ACGCCGCCACCTCGGTCGCCTTCCCCTCCCTCGTCCGGTGGCCTCGGCGGCGACAAGAGGAGTGAGGACCTGTCTGTTTC
AT-TTTTTTCCTTTTCTTAGAATTTGTTCCCGTGGCAGCATCAATGAGGTGGTGGCAACAATGTCGTGTTAGAATAAGGT
CGCTCTGGCCTCTCCCTATCTCGACGACGTCCCATCCAGTGGCACCGAAGGGCATGTGGGAGTTTGTGTCTCTAGATA-T
TTTGGCTTTCTTCGGATCTTGACAGTTGATGTGCCTATCGAGGAGAACAATTTGCTGGCTTTGGTTGATGCGACTTCGAC
ATCTTCTTCCATGTTGTTCCCGGGCATGGTGATGGAT-------------------------------------------
--------TGATGCTTG---------------------AACAAATGTTTGTTCGGTGACTTCTAGATCTCGTTTCAAGCG
TTGAGCAACTATTGTGGTCTTTAAAGCCGGGTACAATGAGGGCATTCGTATCTGTCCATTTCCTTTACTGTTGGTAAGGT
GTAATTTTTAATCTCCGGCTGGTGACAATCAATGGC--AAGAACAACATAAAATAGTATGATTTTCAATGTAGTTTTATG
TTTTACTTGTCGTGATGTATCTGGTTGTCTCTTTATTGTACCGATCATTTTTC-TTTTTCATTGGTT-------ATTATG
ACGTCTCTTAAA-AAAACAATCACAATTTTTTTCCA--CGACTTCCTCTGAAAAA--------AATTAGAAAGATAAGAT
T-CCCTAAAAAGGAGGACCTTCCTGCAAACCCGGAGGTAAATGCAGAGCAACAGCCACCCACCTCCTCCTCACCGTCTTC
CGTCCGT-----TCCCTGAGATTCCTT-CCCCCCACTCGCTCACCGTCTCCCCCATTTCCTCCAAGAATCAAGGAAGCGG
CCAACCACCAC---GAACCAGCACCGGGAGGGAGACCTGCCGCCGCCGGGAAGAGAAGAGAAGAGAATGCTGGAGGGCAA
GGCGGTGGTGGAGGACACGGACATGCCGGCGCGGATGCAGGCGGCGGCGACGTCGGCCGCCTCCCGCGCGCTCGACCTCT
TCGACGTCGACGACTGCCGCGCCATCGCCGGCCACATCAAGACGGTGCGTTCCCTC-CCCGTTCCGCCGTCTCCCCCTCT
CTCCGTTGATTGGTTCG-TCGCCGTCGCTGAGGATCCATCGCTTCCGCGCGTGCAGGAGTTCGACCGGCGGTACGGCGTG
GGGTGGCAGTGCGTGGTGGGCGCCAGCTTCGGGTGCTTCTTCACCCACTCCAGCGGCACCTTCATCTACTTCTCCCTCGA
GCGCCTCACCTTCCTCCTCTTCAAGGCCGCCCCCGTCGCCTTCGCGACCTCCTGTGATTCGTCGGCGGTATCTTGATCTG
CTCCTGTCCAA--CCAACCCTGCAGAGTCTCATTCGTT------GGCGATGACGGATTGA----GCGTCGAGAAGTGGAA
GGGCAAGGCCTCGTTCAGAATCAGAATCAGAGTTCATACCTGTATGCTCTGCTGAACGCGAACCATCCAGATTTTGTACA
TAGACCATGCTCAG----TAAATTGCAGGGTGTTGCCAATCTCCTTGATGTTATCTTTGTTCTAGATTCTGCCGATCTCA
ACTCGTGAAGATGCCACATTTCGTTCGTTTGATCCTAACATTCAG--TTCAGTTTGTTCCGCCCGAAATTAGGGAA----
-TACAATATGTCTGTCCTCGATCGCGATTCAAATCAGCCAATGTGAATGTGGTTGCCTCTGTATTTTGTTT----AATAA
TCAGTAGGTCCGTTGTGTCTGATAGATGTTCAAGTTGCCGTCGCATCCGACTTGATATGACCCACCGCTGATTCCCCACG
T--------CTGCACGACTGCACCAGACGGTTCTGTGACCTCTAGTCCGACAACCGATTCACTGCCGGCAGGATTCATGG
CTGGCAGGTGCCGCTGTTGAGCTGTCATGGAGGATGCATTTGGCCTCAGGTCACCCGAGCGGCA----------------
--------------------------------------------------------------------------------
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------------AAATTTCATGTTTTGACCGTTCTCGCGTACCAATTCAGGATCTGATCCCGGTTGGATTTTTTTTGGAT
TTGACTCTTTTTCTTACCGCCAGAGGTGCTGGCGGTAGGGTTAGACAGCCTCCCGCCAGGGAACCTGGCGGTAGGGTACT
AATCCACGTCAGCATGTGGAGACGGTGACGGCCGACGTCCCCCTCCGTCGCGCCCTACCGCTAGGGTCCTTGGCGGTAGG
CTGTCTAACCCTACCGCTAGCATCCCTGGCGGTAGGGTGCGAGCAGTTATTTCGCCCGAGACCCGTGCCCCTGCCCATTT
CCCCACCCCTCCCCCTCCCCCGTCGGCAG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------TTTCATCTCCCCCCTCGCCCCTCTCTCCCTCTCTCATCTCCTTCACTCT
CCCCCTCCGACTTCACCGTTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>chr4A_1
ATTCCTTGTTTGCAATGTCATC-AAAAGTACGAATACGCCTCCTATTTCAAAACCCCAGTCGCCGCCAAAGGTGTTCTCG
ACGCAGCCGCCTTAGCCGCCCTCCTCTCCCCCGTCCGGTGGCCTCGGTGGCGGCAAGAGGAGTGAGGACCTGTCTATTTC
AAATTTTTTTCTTTTCCTAGGTTTTGTTCCCGTGGCAGCATCGATGAGGTGGTGGCAACGATATCGTGCTAGAATAAGGT
CGTTGTGGCCTCTCACTACCTCGACGACGTCTCATCCAATGGCACCAAAGGGCATGTGGGAGTTTGTGTCTCCAGATTTT
TTTGGCTTTCTTCGGATCTTAACAGTTGATGTTCCTATCGAGAAGAACAATTGGTTGGCTTTGGTTTAGCTGACTTCGAC
ATCTTCTTT-ATGTTGTTCCCAGGCATGGTGATGGAT-------------------------------------------
--------TGCAAGCTATACTACAAGGGGTGATGCTCTAACAAATGTTTGGTTGGCAATTTGTATATCTCGTTTCGAGCG
GCAAGCAACTATTGCAGTCTTTAAAGTCTGATAGAATGAGGGCATTTTTAGGTGTCCATTTCCTTTACTGTTGGTTAGGT
GTAATTTTTAATCTCCGGTTGGCGACAATCAATGGC--AAGAACAACATAAA-TAGTATGATTTTTATTGTAGTTTTATT
TTTTACTTGTCATTATGTATCTGGTTGTCTTTTTATGGGACTGGTAATTTTCT-TTTTCCTTGATAATTATAAGATTAAA
AAGTCTCCTTAA-AAAAGAATCCCAATTTGTTTTTAGGCAACTTCCTCTGATTTTTCTTTCAGAAA-AGAAATATAAGAT
TCCCTTAAAAAGGAGAACCTTCCAGCAAACCCGGAGGTAAAAGCAGAGCAATAGCCACCGACCTCCTCCTCACCTTCTTC
CGTCCGT-----TCGCAGAGATTCCTT-CCCCC-ACTCGCTCAACGTCTCCTCCATTTCCTCCAAGAATCAAGGAAACGG
CCAACCACCAC---GAACCAGCACTGCGG-------------------------GAAGGGA--AGAATGCTGGAGGGCAA
GGCGGTGGTGGAGGACACGGACATGCCGGCGAGGATGCAGGCCGCGGCGACGTCGGCCGCCTCCCGCGCGCTCGACCTCT
TCGACGTCGACGACTGCCGCGCCATCGCCGGCCACATCAAGACGGTACGACATCCTTGCGCCCGC-CCATCTCCTCATCT
ATCCATTAATTGGTTGGTTCGTCGTCGCTGAGGATCCATCGTTTCCGCGCGTGCAGGAGTTCGACCGGCGGTACGGCGTG
GGGTGGCAGTGCGTGGTGGGCGCCAGCTTCGGGTGCTTCTTCACCCACTCCAGCGGCACCTTCATCTACTTCTCCCTCGA
GCGCCTCACCTTCCTCCTCTTCAAGGCCGCCGCCGTCGCCGCCGCGGCCTCGTGTGATACGTCGGGGATATCTTGATCTG
CTGCTGTCCAGCTTCAATCCTGAAGAACCTCATTCGTCGTCGTCGGCGACGAGGGATTCG----GCCTCCAGACGTGGAA
GGGCAAGGGCTCGTTCAGAATCAGAATCATAGTTCATACCTGTATGCTCTGCTGAACTCAAACATGCCAGATTTTGTACA
TAGATCATGGATGCTCACTAAATTGCAGAATGTTGCCAATCTCCTCGGTGTTATCTTC----------------------
----------GTTCTACATTTCCTTCGGTTGATCGTAACATTCAGGTTTCAGTTTGTTGCGCCCGAAATTAGGAAA----
-TACAATATGTCTGTCCTCGATCGCGATTCAAATCAACCAATGT------GGTTGCCGCTGTATTTTTC-CAATGAATAA
TCAGTAGGTCCGTCGTTTCTGATAAATGTTCACGTTGCCGTCGCATCCGACTTGATATGACCCACGTCTGATTCCCCACG
T--------CTGCAC-----------------------------------------------------------------
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------------------------------------------------
>chr7A_359
--------------------------------------------------------------------------------
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-----------------------------------------GGAGAACAATTGGATGGCTTTGGTTAAA-CGACTTCGAC
ATCTTCTTCCATGTTGTTCGCGGGCATGGTCCGGCTTTTCCAACTCTCGGGACCAATGATGATGAATTGCAAGCCATACT
AAATAGGATGATGCTTC---------------------GACAAATGTTTGTTCGGCGATTTCTAGATTCCGTTTCAAGCG
CCGAGTGGCTATTGCAGTTTTTAAAGTCCGGTACAACCAGTGAGCTTGTAGGTGTTCATTTTCTTTATTGTTGGTTAGGT
GTAATGTTTAATCTCGGGCGGGCAACAATCAAAATCAGAAGAAGAAAATG-AATAATATGATTTTCATTGTATTTTTATT
TTTTACTTGTCGTTATGTGTCCGGTTGTCTTTTTATTGTACTGACTATTTTTTATTTTTCTTGATAATTATCAGATTAAA
ACTTCTCTTAAAGAAAACAATCACATTTTTTTG---GGCGACTTCCTCTTAAAAA--------AAT-AGAAATACAAGAT
T-CCCTAAAAAGGAGGACCTTCCTGCAAACCCGGAGGTAAAAGCAGCGCAACAGCCACCCACCTCCTCCTCACCGTCTTC
CGTCCGTTCCGTTCCTTGAGATTCCTTCCCCCC-ACTCGCTCAACGTCTCCTCCATTTCCTCCAAGAATCAAGGAAGCGG
CCAACCACCAC---GACCCAGCACCGGGAGGGAGACCTGCCGCCGCCGGGAAGAGAAGAGAAGAGAATGCTGGAGGGCAA
GGCGGTGGTGGAGGACACGGACATGCCGGCGCGGATGCAGGCGGCGGCGACGTCGGCCGCCTCCCGCGCGCTCGACCTCT
TCGACGTCGACGACTGCCGCGCCATCGCCGGCCACATCAAGACGGTGCGTTCGCTTTCCCGTTCCGCCGTCTCTCCCTCT
GTCCATTGATTGGTTCG-TCGTCGTCGCTGAGGATCCATCGTTTCCGCGCGTGCAGGAGTTCGACCGGCGGTACGGCATG
GGGTGGCAGTGCGTGGTGGGCGCCAGCTTCGGGTGCTTCTTCACCCACTCCAGCGGCACCTTCATCTACTTCTCCCTCGA
GCGCCTCACCTTCCTCCTCTTCAAGGCCGCCGCCGTCACCGCTGCGACCTCCTGTGCTTCGTCGGGGATATCTTAATCTG
CTCTTGTCCAGCTCCAATCCCGGAGAGTCTCATTCGTC------GGCGGCGAGGGATTCG----GCGTCGAGACGTGGAA
GGGCAAGGCCTCGTCCAGAATCAGAATCAGAGTTCATACCTGTATGCTCTGCTGAACTCAAACCTTCCAGATTTTGTACA
TAGACCATGCACAG----TAAACTGCAGAATTTTGCCAATCTCCTTGATGTCATCTCTGTTCTAGATTCTGCCGATCTCA
ACTCGTGAAGGTGCCACATTTCGTTCGTTTGATCCTAACATTCAG--TTCAGTTTGTTGCGCCCGAAATTAGGGAA----
-TACAATATGTCTGTCCTCGATCGCGATTCAAATCAGCCAATGT------GGTCGCCCCTGTATTTTTC-T----AATAA
TCACTAGGTCCGTCGTGTCTGATGAATGTTTAAGTTGCCGTCGCATCCGACTTGATATGGCCCGCGTCTGATTCCCCAAG
TCTGCACGACTGCAC--------CAGACGGTTCTGTGACCTCTAGTCCGACAACCGATTCACTGCCGGTGGGATTCGTGG
CTGGCAGGTGCCGCTGTTGAGCTGTCAGGGAGGATGCATTTGGCCTCAGGCCACCGGAGC--------------------
--------------------------------------------------------------------------------
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>chr4A_567
--------------------------------------------------------------------------------
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-TAATTTTTAATCTCCGGCTAGCGACAATCAATCGC--AAGAAGAACATT-AATAGTATGATTTTCATTGCAGTTTTATT
TTTTACTTGTCGTTATGTATCTGTTT-TTTTTTTGTTGCACTGATCATTTTTT-TTCTTTTTATTG-----CAGATTAAG
ACGTCTCTTAAA-AAAACAATCACATTTTCTTTTCTTTTTGC-------------------------------ATAAGAT
T-CCTTAAAAAGGAGGACCTTCCTGCAAACCCGGAGGTAAAAGCAGCGCAATAGCCACCCACCTCCTCCTCACCGTCTTC
CGTCC-----GTTCCCTGAGATTCCTTCCCCCT-ACTCCCTCAACGTTTCCCCCATTTCCTCCAAGAATCAAGGAAACGG
CCAACCACCACCACGAACCAGCACTGCGG-------------------------GAAGGGAAGAGAATGCTGGAGGGCAA
GGCGGTGGTGGAGGACACGGACATGCCGGCGCGGATGCAGGCGGCGGCGACGTCGGCCGCCTCCCGCGCGCTCGACCTCT
TCGACGTCGACGACTGCCGCGCCATCGCCGGCCACATCAAGACGGTAAGACATCCTTCCACCCGC-CCATCTCCCCATCT
CTCCATTGATTGGTT----CGTCGTCGCTGAGGATCCATCGTTTCCGCGCGTGCAGGAGTTCGACCGGCGGTACGGCGTG
GGGTGGCAGTGCGTGGTGGGCGCCAGCTTCGGGTGCTTCTTCACCCACTCCAGCGGCACCTTCATCTACTTCTCCCTCGA
GCGCCTCACCTTCCTCCTCTTCAAGGCCGCCGCCGTCGCCGCCGCGGCCTCGTGTGATACGTCGGGGATGTCTTGATGTG
CTCCTGTCCAGCTCCAATCCTGAAGAGTCTCATTCGCCGTCGGCGGCGACGAGGGATTCGGTCGGCCTCGGGACGTGGAA
GGGCAAGGGCTCGTTCAGAATCAGAATCACAGTTCATACCTGTATGCTCTGCTGAACTCAAACATGCCAGATTTTGTACA
TAGACCATGGATGCTCACTAAATTGCAGAATGTTGCCAGTCTCCTCTGTGTTATCTTC----------------------
----------GTTCTACATTTCGTTCGGTTGATCGTAACATCCAG--TTCAGTTTGTTGCGCCCGAAATTAGGAAATACA
GTACAATATGTCTGTCCTCGATCGCGATTCAAATCAGCCAATGT------GGTTGCCGCTGTATTTTTC-TAATGAATAA
TCAGTAGGTCAGTCGTTTTTGATAAATGTTCAAGTTGCCGTCGCATCCGACTTGATATGACCCACGTCTGAATCCCCACG
T--------CTGCAC--------CAGACGATTCTGCGACCCCTAGTCCGACAACCGATTAATGGCGGCCAGGATTCTGTG
AA---AGGTGCCGCTGTTGAGCTGTCAGGGATGCATTCGACTGTGGCGTTTACTCTGGCGTGCATCTTCCATTTTATTAA
GATTAAATACAATATGTAATTAGGGGGAAATCTCCTCTTGTCCAAAGGGCCGCGCGGTTGATCCCGCAACCGAAAATCTG
CTCTTGCCCAAATAGCCGTGCGGTTGATCCCGCAACCGACGCCTCTCTCCTCTCAGTTTGGAACCGACGTTTCCTTCTAG
ATCGTGGCGTCCCTTCAGCATGTATATATTGTACTTTCAACCGATCAATAGATAAAGATTTCTATTCGATCTCAAACACG
TTATCACACACGCTGGAACTACCAAGAGCAAATAGAGAAAGGAGAGGGAAGAAGCGGGCAACTCGCCGACGTTCTCTACG
GGGACAATCCGATGAAAGAGGAATTATGCCTTATGGACAGTAGTACCACAAACTCCATATTGAAGGAGATGAAATGTTTT
CAAACTCTGAAAGAAGATTAATGAAGATATTTTAACTATCCTAGACGCGATATGGTGATTGTTGGCACTGGATGTGCCAT
ACTTACCCTCCCAAGTGGTACACAAGTGACAATTGAGGATGCTTTATTGTATCTCGATTCTTCACGTACCCTTATCAGTT
ATCGAGATATCTGTAAAAGTGGGTTTCATATTGAAGCCCTGGAAGACAACAAAGAGGAGTATCTACTCTTTAGCACAGAT
CACATATATGAAAAAAGGTACATCAGAAAATTCCTTCTCTATCGTCTGGTTTTTACTATACATACATCAAACACGTAGAA
CATGTTGCATACAAAGTAACTTTTCAGAATGTTAACGCGTTCCAAACCTGGCATGATCGCCTAAGCTATCCCGGAATCGG
AATGATGAGAAAAACTACTAGCAATTCCATTGGTCATAATTTGCTTGAGTCAAAATTTCCTCAATCTTCATACTTTTGTG
TGCACATCTTGTGGAACGGGAAAACCAATTTTGGGGTCCTTACACCTCAAAATACAAGCTGAACCACTTCAATTTCTTAA
ATGTATTCAAGGAGACATTTATGGTCTCATTCAACCATTATCTGGACCTTTCAGGTACTTCATGGTTCTCGTTGACCCAT
CGACAAAGATGGTCACATGTGTGTCTTTTATCCATACGGAACCATGCATTTTCCAAGATAACGAGGCAAGTAATTAAGTT
GCAAGCCCATTATCCAGAAAGTCGAATTAAGTCAATTCGAGTGGAGAATGCCGCAAAATTCTCCTCACATACTTTCAATG
ATTATTTCGTGGCTTTGGGGATTGAAGTTTAGCACTCTATTCCATATGTCCATACACAAAATGGTTTGGCTGAATCATTG
ATTAATAAGATCAAACTCACTGCAAGACATTTGTTGATGAATTGCAACTTGCCAACCTCTTGTTGGGGTCATGTTGTTTT
ACACACTGCTAACTTGATATAAATATGGCAGCATTTCCCATATCACAGTATTTCCCCTCTGCAATTGGTACGTGTAAATC
CTCCTAGTATTTCCCATCTGCTTAAGTTCGGATGTGCTGCATACATCCCGATCTCACCACCACAACGGACATCTACGGGC
CCACACATGAAACTGCAGATCTATGTGGGGTGCAAATCGCCGTCCTTATCAAGTACCTGGAACCCCTTACAGGGGTTCCG
TTCACGACCCGTCACGCTGATTGCATATTTAATGAGGAGCATTTTCTGGCATTAGGGGGAGCTTTCAAGTGCCAGAAAGA
ATGCCCGGAACTAGATTGGAATGCTCAAGCCATTTCATCCTCTGATCCACGTACACAAGAGATTGAACTCCAAGTTCGAA
AAATCATTAGTTTGCAACATATTGCAAATAATCTGCCAAATTTATTTACTGGTCTAAAAGGTGTTACAAAATCCTTAGAT
TCGGCCAGGAATGTGTCCGAAAGAGTGGAAGTGCCAATAAAAATCACTCAACTCCCTATTCCTAAAAAGAGGGGGAGTAG
TACAGCCTCGAACCTAGAGCATGCTTCTAGCAAGCAGCAAAGGAAACCGAGGAGGTACGGCGTGGGCTGGCGGTGCGTGG
TGGGCGCTAGCTTCGGGTGCTTCTTCACCCATTCCAGCGGCACCTTCGTCTACTTCTCCCTCGAGCACCTCACCTTCCTC
CTCTTCAAGGCCGCCGCCGCCGCGGCCTCGTGTGATGCGTCGGCGATATCTTGATCTGCTCCTGTCCAGCCAATCTGGAG
AGTCTCATTCGTCGACGATGAGGGATCCGGCCTCAAGACGTGTAAAGGCCTAAGGACAAGGCCTTATTCAGAATCAGAAT
CAGAGTTCATACCTGCATTCATGCTCTGCTGAACTCAAACGTGCCAAATTTTGTACATAGACCAGGCTCACCAAGTTGCA
GAATGTTTCCAATCTCCTTGATGTTATCTTGCTTCTACATTCTGCCGATTTCAGTTTGTGATGGTGGCGCATTTCGTTCG
GTTGATCCTAGTATTCTGTTCAGTTTGTTCCGCCCGAACTTAGGAAAT
>SNPs
---S--S-------S-----S-S------------------------S----S---S---S---S--------------S
----S---S---SS-S----S---S-----S----------------S----S----------------------S----
-S-------S------S---SS--------------------S----------------S--S-----S-----------
--S-S---------S---S------------S------S-------S-------------------------S----S--
--------------------S-----------S-------------------S-S-----------S-SS----------
--------------------------------------------------------------------------------
----------------S--------------------------------------S--S---------------------
SS------------SS----------S-S-----------------S---SS-----------------------S----
----------------------S--------------------------------------------S-----------S
-------------S----------------S----------S----------S-------S-SSSSS-----------S-
---------------------------------S--------------------------------S-----S-------
-----------------------------------------S--------------------------------------
---------------------------------S---------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S--S------------------------
----S----------------S-------------------S--------------------------------------
--------------------------------------------------------------------------------
-------------------------------S--------SS-----------------------S-S------------
----------S------S----S--------------S-----------S--S-----SS-------------S------
---------------------------------------------------------S-S----S---------------
----------S-----------------SS--------------------------------------------------
----------S-----------------------------------------------S---------------------
--------------------------------------------SSSSSS-------S---------SSS----------
-------------S----------S----------------------------------------SS-------------
---------------SSSSSSSS-----------------------------------------------------S---
---------------------------S---------------------------S----S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------S-SSS-S--SS--SS---SS-----S----SS-S--SSSSSSSS--SSSSSS--SSSSSSSSSSS
SSSSS-SSSSSSSSSSS-SSSSS-SSSSS-S-SSSSSSSS--SSSSSSSSSSSSSSSSSSSS-SSSSS-SSSSSSS-SSS
SSSS--SS-SSSSSSSS--SS-SSSSS-SSSSS-SSSS-SSS-S--SSSSSSSS-S-S-SSS-SSSSSSSSSSSSS-SSS
S---S-SSSSSS-SSSS-SSSSSSS--SSSSSS-SSS-SSSSSSSSSSS--SS-SSSSSSSSSS--S-S-S-SSS-SSS-
-SS--SSSS-SSS-SSSSSSSSSSSSSSS---------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------S--S-SS-S--S---S-SSSS--------SSS--S---SSSSS-SSS
-S-SSSSS-S-SS-SS-SSSS-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>forward_272
--------------------------------------------------------------------------------
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------------TCCCTATCTCGACGACGTCC------------------------------------------------
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>reverse_1481
--------------------------------------------------------------------------------
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----------------------------------------TTCGCGACCTCCTGTGATTC--------------------
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>forward_1253
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---------------------------------ACATCAAGACGGTGCGTTCC---------------------------
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------------------------------------------------
>reverse_3165
--------------------------------------------------------------------------------
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--------------------------------------------AGTTATTTCGCCCGAGACCC----------------
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------------------------------------------------
