>input_sequence_81248
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-------------------------------------------------------------------------ATGGAGC
GTTCTTCTTCCTCGCTCGCCC---------------------------GCAGCAGCGTCGCCCTCCTGCTGCTGCTGGCT
CTCCTACTCTGTTCTTTGGCGTGCTCGGCCGCGGTCCAAGG----TATGCGTTTCGCTCAAACAACTGATCACTTCTTTC
TGCGTATGCTTGGCCGGATTGATGAATCGACGTGTGCATGCACGCAGTTTCTCTGGACGGAAGCCGCGAGGGGCAACGTC
CTCCAGCACCCTGGGCCTCAGGCGCAAGGTCGAAGTACTGCCCAGGCTGCAGCGACGACGGCGTCCCTCCGCCGCCGG--
-------CTGCAAGTACGTCGGCACTTGCGCCTCACCGCAAGACCCTGGGGATTGCTGCGATGATCC---CTTCCACAGT
TCCACGCGTGCCACCGACACCGATGCTAGATGATCTGTTCTTTTGA----------------------------------
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>chr7B_1_TraesCS7B01G045700
ACGCAGCCGCTCCGGGGGGGCATAGAAGAAGTACGACAGGAGGAAGGACACGCCATCGCAAGAGAAGCAATCGGCGACGA
ACGGCACGACGACCCAAACGGTGCCGGGGTCGGTAAGAGCAGGGAACTCCGAGGGGTCGAAGGCGACTCCAGAAAGGAAA
GAAGCAACGACACAGGCGCGGAAGGCGATACCTGAACGAGGGACAAGGTCAACGGTGGTGGCGCGGGGCGGCAGGACAGG
GCGCCCGTCAGCAGCAGAGCGGTCCGGGCTGCGGACAAGGAGCGGAGCCGGCGGCCTCTCCGGCGCTCCATCGGCGCCGG
CTAGGCCCAAGTCGAGAGCAGGAGGTGGCGTGGGTGGTGTGGCGGCGGGATCGGCGCCGCCCGGCGAGTCGCCAGGCGAG
TCGCGGGAGCCCATCAGTCGCCACGGGCACTTTTCTCAAATGTTAACCGGGGTGAGCTCCAAAAATCCGCACAACGTCAA
-ATATGGAGGCTCGGGGCTAGGTTTGAAGCGCCCTCTAAAAATTATGTTGATCCGGGGTGGGATGACGACTCTACTAAAA
TAGTA----TTTTTGATCGAAATCATTTCAATTGCGGTTATTACCACAATCAAACAATTATAACGACTCTGCTAAAGTTC
TTCTA-----ACACAGCGCTCGCGTCTTTTTTCTCCATCGCTGGTAG------GTGGGCTGTCCCTTCCTCACAGTTGTG
ACAGGAGACAACATTTATTTGGAGAAACACGCATCATTCACACATCACGCTCAGTCCATTACAGACAACAGTACACACAC
ATGGGCACACGGTAT-------ACAGTATACACACGAGTGCCTATCACTACAGCACACCATGTTGACCGAGGGACGACTC
TGACCATTTATAATCCCGTGGAGTCTCATACGAATCCAAGACTACATCGCCAGACAACCTTCTCTACGCGAATAGTTCCT
TCCCTATATAAAA----------CAAAGATATTGAGAATAGCCGACAGAGAAGCTGGACACGATCACACGAGGATGGAGC
GTTCTTCTTCCTCGCTCGCCC---------------------------GCAGCAGCGTCGCCCTCCTGCTGCTGCTGGCT
CTCCTACTCTGTTCTTTGGCGTGCTCGGCCGCGGTCCAAGG----TATGCGTTTCGCTCAAACAACTGATCACTTCTTTC
TGCGTATGCTTGGCCGGATTGATGAATCGACGTGTGCATGCACGCAGTTTCTCTGGACGGAAGCCGCGAGGGGCAACGTC
CTCCAGCACCCTGGGCCTCAGGCGCAAGGTCGAAGTACTGCCCAGGCTGCAGCGACGACGGCGTCCCTCCGCCGCCGG--
-------CTGCAAGTACGTCGGCACTTGCGCCTCACCGCAAGACCCTGGGGATTGCTGCGATGATCC---CTTCCACAGT
TCCACGCGTGCCACCGACACCGATGCTAGATGATCTG--TTCTTTTGATGATGATGATCAGACGGCTTAAAAGTCAAAGC
AGAGAAATCTAAGCT-AGCCTTTACCACCCAGACAATGTTGCATGTTGGCTCTCCAAACTAATTGTAAGCGGAAGTTTTG
CCTTTGGCCGACA----CCATCTTGTGGTAT----TAGAGCAACTCTAGCAGCAAGAGCCTTCATATTCTCTAGGTCGTC
AAAATAATCACTAATATGATGTTTTTGAGTGAAAATAACACGATAAGAGATTCGCCATCCAGCCTCATATCATCATAATT
TATGGAGGGTGCTCCATATCGAGCCCACATGTCTTCATATTTGGAGGCTGGGGGTTGGTTTGAAGCGCGCTCCATCCATC
AATCGTCCACATGTGAGGAACGTATCATCTTCCTCCTCAACCTTCGACGTGGACCATCTTTTGTCCCTACTAATGGTGCA
GTGACCATGGCATCAGGAAACGTGCCAATTAATGGTTGACACCGTGTGCCAACTACTCGTGGCCACTCCCGCCACATTTC
TTGGT-GCCCACCATGTTTATATGTTACCTACCATTTGTGAATATAAAATGGTCATCGCCATGGTTGAAAAGCTCACAGC
CTGCACTGCCAACACAGTTGCCCATAGCCCCTTTCTCC-TTTATGACATCATGTTGCTTCCCCTGTGAACAGATTTTGGC
TAGATTGGGTGCCGCTCGAGGAGGGG-------------------------------GGATCGACTTTATGTCCTAGAGG
CCGCGTGGGAGGATCCTTCCCTTGATGAGTGCCCTGATTAGAATCCCATAACACAT------------GATATCCAGCAC
TAGAATGTGCAGATCCCGTATGAGTAGGAGAGGGCTCGCCCAAGAAACTCATATCGGGCACCACATGCTTTCCATCGCAT
CTCTGTTAAGGAGGTGTGGGATTAGCGCCACGCCGCCCACACCTCGATCGTTCGGCTCGACAAAATCTTCAAGCGTAGCA
ACGCCAAGAAGGCGCTGCAGATGGAGAGTGACCGCACCATTTGGCTCTATTACAAGGCATAA
>chr7D_449
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------------------------------------------------GGTGTGAGCTCCAAATATCCCCACAACCGTCA
GATATGGAGGCTCGGGGCTAGGTTTGAAGCGCCCTCTAAAAATTATGTCGGTCGGGGGTGGGATGATGACTCTACTAAAA
CAGCAGTATTTTTTTATCAAAAACATTTTAATAGCGGTTAATATGACAATCAAACAATTATAACGACTCTGCTAAAGTTC
TTCTAATATAACACAGCACTCGCGTCTTTTTTCTCCATCGCTGGTAA------GTGGGCTGTCCCTTCCTCACAGTTGTG
ACAGGAGACAACATTTATTTGGAGAAATACGCAGCATTCACACATCACGCTCAGGCCATTACAGACAACAGTACACACAC
ATGGGCACACGGTAT-------ACAGTAGACACACGAGTGCCTATCACTACAGCACACCATGTTGACCGAGGGACGACTC
TGACCATTTATAATCCCGTGGAGTCTCATACGAATCCAAGACTA-ATCGCCAGACAACCTTCTCTGCGCGAATAGTTCCT
TGCC--TATAAAA----------CAAAGATATTGAGAATAGCCAACAGAGAAGCTGGACACGATCACACGAGGATGGAGC
GTTCTTCTTCCTTGCTCGCCC---------------------------GCAGCAGCGTCGCCCTCCTGCTGCTGCTGGCT
CTCCTACTCTGTTCCTTGGCTTGCTCGGCAGCGGTCCAAGGTATATATGCGTTTTCCTCAAACAACTAATCACTTCTTTC
TATGTATGCCCCGCCGGATTGATCAATCGACGTGTGCATGCACGCAGTTTCTCTGGACGGAAACCGCGAGGGGCAACGAC
CTCCGGCGCCCTGGGCATCAGGCGCGAGGTCGAAGTACTGCCCAGGCTGCAGCGACGACGGCGTCCCTCCGCCGCCACCG
CCGCCGCCTGCAACTACGTCGGCACTTGCGCCTCACCGCAAGACCCTGGGGGTTGCTGCGAGGATCC---CTTCCACGAG
AAC--------------CACCTATACTAGATGATATATATTGTTTTGTTGATGATGATCAGACGGCT-AAGAGTCAAAGC
AGAGAAATCTGAGCTAAGCCTTTACGACCCAGACA-TGTTGCATGTTCGCTCTCCAAATTAATTCTAAGCGGAAGTTCTA
CCG----TGACCGACACCCATCTTGTGGTAC----TAGAGCAACTCC--------GAGTCATCGTATTGGCTCGATCGTC
ATTATAATCATTAATATGACGATTTTGAGCAAAAATAATGCTCTAAGAGAGTCGCCATCGC-------------------
------------TTCATATCA-----------------------------------------------------------
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>chr7A_615
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-----------------------------------------------------------ATAACGACTCTGCTAAAGTTT
TTCTAA-----CACAGCGCTCGCGTATTTTTTCTCCATCGCTGGTAGTCGTAGGTGGGCCGTCCCTTCCTCACAGTTGTG
ACAGGAGACAACATTTATTTGGAGAAGTACGCAGCATTCACACATCACGCTCAGGCCATTACAGACAACAGTACACACAC
ATGGGCACATGGCACACTGTACACAGTATATACACGAGCGCCTATCACTACAGCACACCATGTTGACCAA-GGACGACTC
TGACCATT-ATAATTCCGTGGAGTCACGAACTAATCCAAGACAACGTCGCCAGACGACCTTCTCTGCGCGAATAGTTCCT
TCCC--TATAAAGCAAGCACGCGCAAAGACATCGAGAATAGCCGACAGAGAAGCTCCCATAAGT------AGCATGGAGT
GTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCGGGCACGCGGCAGCGGCATCGCCCTCC------TGCTGGCT
CTCCTACTCTGTTCCTTGGCGTGCTCGGCCGCGGTCCAAGG----TATTCGTTTCCCTCGAACAACCAACCATTTCTTTC
TGCGTATGCTTGGCCGGATTGATCAATCGACGTGTGCATGCACGCAGTTTCTCTGGACGGAAACCGCGAGGGGCAACGAC
CTCTGGCGCCCTGGGCATCAGGCGCGAGGTCGAAGTACTGCCCAGGCTGCAGCGATGACGGCGCCACTCCGCCGCCACCG
CTGT---CTGCAACTACGTCGGCACTTGCGCCTCACCGCAAGACCCTGGGGGTTGCTGCGAGGATCCTCCCTTCCACGAG
AAC--------------CACCTATACTAGATGATATATATTGTTCTGTTGATGATGATCAGATGGCT-AAGAGTCAAAGC
AGAGAAATCTGAGCAAAGCCTTTACGACCCAGACA-TGTTGCATGTTGGCTCTCCAAATTAATTCTTAGCGAAAGTTCTA
CTACCCTTGACCGACACCCATCTTGTGGTATATATTAGAGCAACTCC--------GAGTCATCGTATTGGCTCAATCGTC
ATTATAATCATTAATATGACGATTTTGAGCAAAAATAACGCTCTAAGAGAGTCGTCATCCAACCTCAGATAGTCATAATT
TATGGAGGGCGTTTCATATCAAACCCGCAAGTCTTCATATTTTGACACTAGGT----GTTTGGAGTGTGCTCCATCCATC
AACCAACCGCATGTGAGCGCT-----------CTCCTCACCCTTTCGCGCGGCCCATTTTTTGTCCCTACCAATGGCGCC
GTAGACGGTCA-------------------------TGACAACGTGTGTCAACTGCTCGCGGCCACTCCCGGCACATTTT
TCCAACGCCCGCCATATTTTTCCGTCACCCACCATTCACGACTGTAAAAAGGTCGTTGCCATGGTTGAATAGCTCACAAC
CTCCACTGACAACACAGTTGCCTATAGCCCCTTTCATCATTCATGTCGTCATGCCGCTTCCCATGT-----------GGC
CAGAATGGGTGTCGCTCTTGGAGGAGCAGGTGATGGAAGAGGAGCAAGCAGAGAGGAGGATCAACATTATGTGCTAGAGG
CCGCGCAGGAGGATCCTGCCCTTGATGAATGTGTGGGTTGGAATCTCATAACACACTCCACTTTTAAGGATATCCAACAC
GGGAACGTACATATCCCGTATGAGCAGGAGAGGGCTCGCCCATGCAACTCATATCGGACACCACATGTTTCCCCTCACAT
CTCTGTTAAGGATGTGTGGGATTAGTACCATGCCTCCCATGCCTCGATCGTCCACCCTGACAAAATCTTCAAGCATAGCT
ATGCCGGGCAGGCATTGCTGGTGGAGAGCCGCCATGCCATCTGGCTCTATTACAA-------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S------------S----S------SSSS-
------------------------------------------------S-S--S------------S-------------
S--S----------S---S---S-----S---S-------S--SS-----------------------------------
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---------------------------S-----S--------------------S-------------------------
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-----------------------------------------------------------------S--------------
----SS--------------------------------------------------------------------------
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--------------S----------------------------------------S-----------S------------
-----------------------S--------------------------------------S---------------S-
----S--S--------S--------S--------------------------------------------------SS--
-------------S-------------------------------------S---------S---------------SSS
SS-SSSSSSSSSSSSSS----S--S---------S-S----S-----S-------------------S--S---------
----------S--------------S---------S----------------------S-----S------------S-S
--SSSSSSSSS-S---------------------------------SSSSSSSSS---S-S--S----SS--S-S-----
-SS-------S--------S-S-------SS--------S-SS-------S----------S-----S--SS--------
---------S-S-S------S-S---S--S------------S--SS--S--SSSSS-----S--S-S------------
--S-SS--S--------SSSSSSSSSSSSSSS-------S----SSS--S--S----S------------S-----S--S
--SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S------S-----S----S-----------S-------S
-SSSS-----S----S---S-SS--S---S------SSS--S-S-----S----S-S------------S--------S-
--S-----S-------------S------------SS----S---S-S-----SS-------S---SSSSSSSSSSS---
S---S------S-----SS-----S-------------------------------------S--S------S-------
-----SS----------S----------S--SSSS-S--S-----S---------S--------------------S---
SS---S--S--S------------S-----------------S-S------------S---------S--S--S--S---
------------S------------SS---S---S----SS----------S-SS-SS----------------S----S
-S---SS-S----SS---S-S-------SSS--SSS----S--------------SSSSSSS
>forward_210
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------------------------------CCTGAACGAGGGACAAGGTC------------------------------
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>reverse_2050
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-------------------------------------------------TGGTCATCGCCATGGTTGAA-----------
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