>input_sequence_81247
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------------------------------------------------ATGGATCTAATCG-GCGGTGCGCAAAGGCGAT
CAATGGAGGATGGCAACATCAACCGGACAGGAGGGACAAAGGCAAGGGCGGCACTCCTTACCCCACGCTCAGCAAGTGTG
C-AAATGGATGAGGCGCTCATGAGGCTCGAGATCTTCGAAGAGAAGGCAACCTTGTTGGTGATCAACGACCTGGAAGAGG
AAGGTGATTTGAAGTGGTTGCTGGCAGTTAAAGTTTTGCACCGCACGTTACTCCACGTCCAGACGATCTTCATCGTTTTA
CGCCTGGCCTAGGACAACCCAAGGGGCTCGATTGCTCGGTTGCTAGAAAAAAACACATGTTTGCTGAAGAGTTCGAAACC
AAGCGGGTCGTGATCATGTTTGGGAGAGCTTGCCATGGCATATTAGCAAGAACACTGTGA--------------------
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-------------------------------------------------
>chr7A_1_TraesCS7A01G179000
CGCAAGTAGAGTTTTTTTTTCCTTTTTTAATATTGTAGATCAATTTATTTAAAACATTTTATCTCTTAAATCATGCGTTC
AAATTTTAAACCGTTTTCATCGTTGAATTCATCGCGTCGAGATCTTCAAAATTAGATCTTGTATTAATAGGTTTTGATGA
ACTGTTCTTTCACGAAAAAAAACAGACGAACATCTAAAAAGAAAAAGAAAGACCGACCATGCCATTTTTTCCCTTTTCTA
AAGTCATTTTCGAGACACACGGCCGCGTCTCCCGCAGAACCAAATCCGTGCCTCTTACGTAATGAAAAAAATTGAATTTT
TTTCCGTTTCTGATAGGCACAACCATGCCTCTTGTGGAAGG-AAAAAACGTATTTTTCTTGTTTTCGAGAGGCATGACCG
TGCCTCTCGCTGAAGGAAAAATATGAGTTTTTTT-GTTTCCAAGAGGGACGACTCCCGCGAAAGAAAAAGAAAACATGTT
TTTTTGC---AAAAAATATTAGTCCAAAAGCTAAGAAAGACTGGTTGAAAACCAAAAAGCCAGAAACAGCCAAAAAAATT
CTAAAAAGCCAAAAACACGTGCCGATTTTTTTAGAAAA--TCCGGAGGGAGCACCCAGAGCGCGACACGTGACGGCGGCT
GAGTGGTCTCAGCCCACCGCAAGTGACCCTTGGGGAGGCTCCCGAACAAGCGTTCCTCAATTAATTGCCCTCTAGTTCTC
CCTTTGCACCGCGAGTCAGTATTGTTGTACTCATCTA-TTTTTCTACTTCGTGTATAAAATATGTCCTTAGTCATGTTTT
CAAAAATTAGGACGGACACAACCGGTCCGTGTTACTTTTCCGTTTTTCCTGAACTCCTAAAAACCTACTCCCTCCGTTCA
GAATTACTTGTCGCGAAAATGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTCCGAGACAAATAATTTCGA
ACGGAGGGAGTATTTGGCGGCTAGGGCGGCGGTGGACTGGCGACGCTCATGGATCTAATCG-GCGGTGCGCAAAGGCGAT
CAATGGAGGATGGCAACATCAACCGGACAGGAGGGACAAAGGCAAGGGCGGCACTCCTTACCCCACGCTCAGCAAGTGTG
C-AAATGGATGAGGCGCTCATGAGGCTCGAGATCTTCGAAGAGAAGGCAACCTTGTTGGTGATCAACGACCTGGAAGAGG
AAGGTGATTTGAAGTGGTTGCTGGCAGTTAAAGTTTTGCACCGCACGTTACTCCACGTCCAGACGATCTTCATCGTTTTA
CGCCTGGCCTAGGACAACCCAAGGGGCTCGATTGCTCGGTTGCTAGAAAAAAACACATGTTTGCTGAAGAGTTCGAAACC
AAGCGGGTCGTGATCATGTTTGGGAGAGCTTGCCATGGCATATTAGCAAGAACACTGTGATCTTAGAGGAATTAGTAGTA
CACCCGTGCGTTACTACGGACTACAATGCATA------------------------------------------------
--------------------------------------------------------------------------------
-CAAATAAATCACCCAAATAGTCATATCCAAGATCAAATCTTATTCCTCATACATCCGAGCATGTTAGGACATTAAG---
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--------CAAGCTCCACAAAATTTAACCGTCTGGATAGTCCCT-C----------------------------------
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--------------------------------------------------------CGGGCTACAATGCATACAAATAAA
TCACACAAATGGTCATATCCAAGGTCAAATCTTATTCCTCATACATCCGAGCATGTTAGGACAT----------------
--------------------------------------------------------------------------------
---------------------------------TAAGCAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNN-------------------------------------------------------------------
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-A------------------------------------------------------------------------------
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---CGACGCACACTTACCTTTCTTGTCGGACATTCCACCTACCGCTCGGATTCCCGTCTTAACAGGACATTTCACGCTGG
GGCCCTCGTTATTAACTCTTGAAGCAACCAACAACCCTTCTATCCTAACCAAAAAATTGTACGGCTTGATGAAAATAATA
TATGGACCGCTCGCTCATGCTGTTTGTTGCAAAGGATCTCACATGAAATGTTATACATATGTCACATTGGTTCACTATCC
TATCTATAATGCCGTGACAGTAGTTTAGAAACTCTCCTAGCACTCCAAATACCGGCAACAAAATCACCAAATATATAGCA
TCCGCAGCTACCATGAAATAGGACACTAAACAACATTTGCAGCAAGTAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACAGAACTGACAAATGTGACTAACTCTGTAAGAAGCTTTGCCTTCAGAACC
TAAAAATGGTTTAACCCCATCACTACTTCAGCCGCTCTCTGATCTCAAT
>chr7D_16
---------------TTTTTCCTTTTTTAATATTGTAGATCAATTTATTCGAAATATTTTATATCTTAAATCATGCGTTC
AAATCTTAAACTGTTTACATCGTTGGATTCATCGCGTCGAGATCTTCAAAATTAGATCCCATATTAATAGGTTTTGATGA
AAAATTCACGG------AAAAAATGACGAACAAATCACACGAAGAGCAC---------------TTTTTTCTCTTTTCTA
AAGCCATTTCCGAGACACGCGGCCATGCCTCTCGCAGAAGCAAATCCGTGTCTCTCACGTAATGAAAAAAATACA--TTT
TTTCTGTTTCTGATAGGCACGGCCATGCCTCCCGCGGAAGGAAAAAAACGTATTTTTTCCCTTTTTGAGAGGCACGGCCG
CG---------GAAGGAAAAATATGAGTTTTTTTCGTTTCCAAGAGGCACGGCTCTCATGAAAGAAAAA-AAAACATGTT
TTTTCGAAAGAAAAAAAATTAGTACAAAAGCTAAGAAAGACC-GTGGAAAACCGAAAAGCCGAAAAAAACCAAAAAACAT
CAAAAAAGCCAGAAACACGTGCCGAAAATTAAAAAAAAATTCCGGAAGGAGCGCTAAGAGCGCGACACGTGGTGGCGGCT
GAGCGCTCTCAGCCCACCTCAAGTGACCCTTGGGGAGGCTCCTTTG----------------------------GTTCTC
CCTTTGCACCGCGAGTCAGTATCGTTGTACCCATCTAGTTTTTCTACTTCGCGTATAAAATATGTCCTTAGCCAAGTTTT
CAAAAATTAGGACGGATACAACCGGGCCGTGTTACTTTTTCGTTTTTCCTGAACCCCTAAAAACCTATC-----------
--------------------------------------------------------------------------------
--------------TGGCGGCTAGGGCGGCGGTGGACTGGCG---CTCACGGATCTGATCGCGCGGGGCGCAACAGCGAT
CAACGGAGGATGGCAACATCAGCCGGTCAAGAGGGACAA-GGCAAGGGTGGCACTCCTTACCCCACGCTCAGCAAGTGTG
CAAAATGGAGGAGGCGCTCGTGATGCTTGAGATCTTCGAAGAGAAGGCAACCCTGTTG----------------------
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-------------------------------------------------
>chr5B_1423
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------------------------------------------------------------------------TAGTAGTA
CACCCATGCGTTGCTACGGGCTACAATGCATA------------------------------------------------
--------------------------------------------------------------------------------
-CAAATAAATCACACAAATGGTCATATTCAAGGTTAAATCTTATTCCTCATACATCCGAGCATGTTAGGACATTAAG---
--------------------------------------------------------------------------------
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--------CAAGCTCCACAAAATTTAACCGTCTGGATAGTCCTCCC----------------------------------
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--------------------------------------------------------CGGGCTACAATGCATACAAATAAA
TCACACAAATCGTCATATTCAAGGTCAAATCTTATTCCTCATACATCCGAGCATGTTAGGACAT----------------
--------------------------------------------------------------------------------
---------------------------------TAAGCAAGCTCCACAAAATTTAACCGTCTGGATAGTCCGGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNT------------------------------------------------------------------------GG--
----------------------------------------------------------TCCCAACACGAAAACCCCACCC
CA------------------------------------------------------------------------------
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---CGACGCACACTTACCTTTCTTGTCGGACATTCCACTTACCGCTCGGATTCCCGTCTTAACAGGACATTTCTCGCTGG
GGCCCTCGTTATTAACTCTTGAAGCAACCAACAACCCTTCTATCCTAACCAAAAAATTGTACGGCTTGATGAAAATAATA
TATGGACCGCTCGCTCATGCTATTTGTTGCAAAGAATCTCGCATGAAATGTTATACATATGTCACATTGGTTCACTATCC
TATCTATAATGCCGTGACAGTAGTTTAGAAACTCTCCTAGCACTCCAAATATCGGCAACAAAATCACCAAATATATAGCA
TCCGCAACTACCATGAAATAGGACACTAAACAACATTTGCAGCAAGCAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACAGAAATGACAAATGTGACTAACTCTGTAATAAGCTTTGCCTTCAGAACC
TAAAAATGGTGTAGTCCCATCACTACTTCAGCCGCTCTCTGATCTCAAT
>chr5B_1423
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGTAGTA
CACCCGTGTGTTGCTACGGGCTACAATGCATA------------------------------------------------
--------------------------------------------------------------------------------
-CAAATAAATCACACAAATGGTCATATCCAAGGTTATATCTTATTCCTCATACATCCGAGCATGTTAGGACATTAAG---
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------CAAGCTCCACAAAATTTAACCGTCTGGATAGTCCCCCC----------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CGGGCTACAATGCATACAAATAAA
TCACACAAATGGTCATATTCAAGGTAAAATCTTATTCCTCATACATCCGAGCATGTTAGGACAT----------------
--------------------------------------------------------------------------------
---------------------------------TAAGCAAGCTCCACAAAATTTAACCGTCTGGATAGTCCGGACCCCCC
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACCCATATATTATCCCAACATGCGG--
----------------------------------------------------------TCCCAACACAAAAACCCCACCC
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---CGACGCACACTTACCTTTCTTGTTGGACATTCCACTTACCGCTCGGATTCCCGTCTTAACAGGACATTTCTCGCTGG
GGCCCTCGTTATTAACTCTTGAAGCAACCAACAACCCTTCTATCCTAACCAAAAAATTGTACGGCTTGATGAAAATAATA
TATGGACCACTCGCCCATGCTGTTTGTTGCAAAGAATCTCACATGAAATGTTATACATATGTCACATTGGTTCACTATCC
TATCTATAATGCCGTGACAGTAGTTTAGAAACTCTCCTAGCACTCCAAATACCGGCAACAAAATCACCAAATATATAGCA
TCCGCAGCTACCATGAAATAGGACACTAAATAACATTTGCAGCAAGCAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACATAACTGACAAATGTGACTAACTCTGTAAGAAGTTTTGCCTTCAGAACC
TAAAAATGGTATAGTCCCATCACTACTTCAGCCGCTCTCTGATCTCAAT
>chr5B_1423
--------------------------------------------------------------------------------
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------------------------------------------------------------------------TAGTAGTA
CACCCGTGCGTTGCTACGGGCTACAATGCATACAAATAAATCACACAAATGGTCATATCCAACGTCAAATTTTATTCCTC
ATACATCCGAGCATGTTAGGACATTAAGCAAGCTCCACAAAATTTAACCGTCTGGATAGTCCCCCCAGGCTACAATACAT
ACAAATAAATCACACAAATGGTCATATCCAAGGTAAAATCTTATTCCTCATACATCCGAGCATGTTAGGACATTAAGCAA
GCTCCACAAAATTTAACCGTCTGGATAGTCCGGTCTTCGGCCCTGGAATACGGAGAGAAGAACGAGCTGCACGTCGTCGC
ACTTTGCCCTGGTCTGGTCTTCGGCCCTCTGTTGCAGCATGTGGCGGTCAATACCAGCAGCAAGGTCCTCGTCTACATGA
TAAAAGGTTCCACTCCTCAGCTCATCTATCACAAGGATACATAATCATTTTGTACATTGCACATCACATGTGGTTAGAGG
TTAGTACTTTTGGTAACCAAAGCCGGTTGTTTTCCTTCCATTTTGCTGTTTTTGTTGTCGAAGTGCAGCAGAGCGATGAA
GTTCAGAACAAAAATTGACACCGGAGGAGCTCCTCGGCTTTTATATTAATAGTGTAATAAAACACCCCCGGTTTTAATGA
AGTTCAGAGAATGACCTTTTAAAATACACATCCTTGTGCCTAATGTAGTTCCATCATATGTCCGATCGCAGGAGGCCCTG
ACACGATGAACGACAAGTTCTTTCCCATCGTAGACGTTCGCGATGTTGCCGACGCATTGCTCCTGTTGTACAACAAGGCA
GGGCCATCTGAGAGATACATATGCTCACTGGACCAAATGGACCTAAAGGATTTGCTGGCAATCATGAAGAACATGTACCC
TAGCTACACTTATGCAGACAAGTAAGTGCCATGGCATCAAGACTATCAACACCATGTCATAGCTTGCTTATCATATACTA
CGAAGGATTTTCATTACGAAATTTTGGGTTGGCAGGATGGTTGATGTGGACTTTAACGTCGGAGTCACTTCGGACAAGCT
GAACAATTTAGGGTGGAAACCAAGGAAGATGGAGGAGACACTCGTGGATTGTATCGAGTCCTATGAAAAAGCAGGGCTTC
TTGGGGTTACAGACGACGAACCATGCCGGCTTCCATTCATCTACCGAATGCCGCCTATCCAGGAATGAGAATGATCCCAT
AATTGTGCCATTGATTCTGCATTTGGCCTGAAACATCATGAAATGTGTTTTGCAAAAATAAGCACGGGTTAGGTCTCTAT
TTCTCGACTCCTCCACTAGTCCATTCAGGATGGATGCAAATGTAAAAATTGTGCATTCGTGCTCACTTCCGTCAAGAGAA
AGCGGACTCTGGAGGAGTACTCTAAAAGTAGTGACTGCAGAGTTATGAACACTAGTAGTACACCCGTGCGTTGCTACGGG
CTACAATGCATACAAATAAATCACACAAATGGTCATATCCAACGTCAAATTTTATTCCTCATACATCCGAGCATGTTAGG
ACATTAAGCAAGCTCCACAAAATTTAACCGTCTGGATAGTCCCCCCAGGCTACAATACATACAAATAAATCACACAAATG
GTCATATCCAAGGTAAAATCTTATTCCTCATACATCCGAGCATGTTAGGACATTAAGCAAGCTCCACAAAATTTAACCGT
CTGGATAGTCCGGTCTTCGGCCCTGGAATACGGAGAGAAGAACGAGCTGCACGTCGTCGCACTTTGCCCTGGTCTGGTCT
TCGGCCCTCTGTTGCAGCATGTGGCGGTCAATACCAGCAGCAAGGTCCTCGTCTACATGATAAAAGGTTCCACTCCTCAG
CTCATCTATCACAAGGATACATAATCATTTTGTACATTGCACATCACATGTGGTTAGAGGTTAGTACTTTTGGTAACCAA
AGCCGGTTGTTTTCCTTCCATTTTGCTGTTTTTGTTGTCGAAGTGCAGCAGAGCGATGAAGTTCAGAACAAAAATTGACA
CCGGAGGAGCTCCTCGGCTTTTATATTAATAGTGTAATAAGACACCCCCGGTTTTAATGAAGTTCAGAGAATGACCTTTT
AAAATACACATCCTTGTGCCTAATGTAGTTCCATCATATGTCCGATCGCAGGAGGCCCTGACACGATGAACAACAAGTTC
TTTCCCATCGTAGACGTTCGCGATGTTGCCGACGCATTGCTCCTGTTGTACAACAAGGCAGGGCCATCTGAGAGATACAT
ATGCTCACTGGACCAAATGGACCTAAAGGATTTGCTGGCAATCATGAAGAACATGTACCCTAGCTACACTTATGCAGACA
AGTAAGTGCCATGGCATCAAGACTATCAACACCATGTCATAGCTTGCTTATCATATACTACGAAGGATTTTCATTACGAA
ATTTTGGGTTGGCAGGATGGTTGATGTGGACTTTAACGTCGGAGTCACTTCGGACAAGCTGAACAATTTAGGGTGGAAAC
CAAGGAAGATGGAGGAGACACTCGTGGATTGTATCGAGTCCTATGAAAAAGCAGGGCTTCTTGGGGTTACAGACGAAGAA
CCATGCCGGCTTCCATTCATCTACCGAATGCCGCCTATCCAGGAATGAGAATGATCCCATAATTGTGCCATTGATTCTGC
ATTTGGCCTGAAACATCATGAAATGTGTTTTGCAAAAATAAGCACGGGTTAGGTCTCTATTTCTCGACTCCTCCACTAGT
CCATTCAGGATGGATGCAAATGTAAAAATTGTGCATTTGTGCTCACTTCCGTCAAGAGAAAGCGGACTCTGGAGGAGTAC
TCTAAAAGCAGTGACTGCAGAGTTATGAACACTAGTAGTATACCCGTGCGTTGCTACGGGCTACAATGCATACAAATAAA
TCACACAAATGGTCATATCCAAGATCAAATCTTATTCCTCATACATCCGAGCATGTTAGGACATTAAGCAAGCTCCACAA
AATTTAACCGTCTGGATAGTCCCCCCATGCTACCATGCATACAAATAAATCACACAAATGGTCATATCCAAGGTAAAATC
TTATTCCTCATACATCCAAGCATGTTAGGACATTAAGCAAGCTCCACAAAATTTAACCGTCTGGATAGTCCGGTCTTCGG
CCCTGGAATACGGAGAGAAGAACGGGCTGCACGTCGTCGCACTTTGCCCTGGTCTGGTCTTCGGCCCTCTATTGCAGCAT
GTGGCGGTCAATACCAGCAGCAAGGTCCTCGTCTACATGATAAAAGGTTCCACTCCTCAGCTCATCTATCACAAGGATAC
ATAATCATTTTGTACATTGCACATCACTGGGGCTGGAAAAAAAGCTCGAAGCTCGCGAGCTAAATGAGTAGCTCGTGACT
CGGCTCGAATCGGCTCGAACTCGAAGAATAACGAGGCAAGCCGAGCTTTAGTTTAAGATCGTTTATAGACCAAGTTAAAC
GAGCCAATCTCACGAGTACTCGTGTAACTCGTTAGGCTCGGTACAAAAGATCAGCCACTCCCAATACAAAAAAAGATCAG
CCATTCAGCACCCTATGTCCCAGGCACACAACACAAGGCCTAGCCGTTGAAGGCCCAGACTCATGCGTTACAAGCAAATT
ACTATTGTTTAGTGATATATATGTTTAATATATACATAGTCATTTTATAATATATGAGCGTTTTATGTTCATATCTTTAA
TGAGCTTAACAAGCTAAAAGAGCCAGCTTGCGAGTTATACGAGTCGAGCCAATCTTGGATTTGAGCTCGTTATAACAACG
AGTCGAGTCGAGCTAGCTCGTTAACGAAACGAGCTCTAGCGAGTCGAGCCGAGCTGGCTCGACTCGGCTCGAATTCCAGC
CCTACACATCACATGTGGTTAGTGGTTAGTACTTTTGGAAACCAAAGCCGGTTGTTTTCCTTCCATTTTGCTGTTTTTGT
TGTCGAAGTGCAGCAGAGCGATGAAGTTCAGAACAAAAATTGACGTCGGAGGAGCTCCTCGGCTTTTATATTAATAGTGT
AATAAGACACCCCCGGTTTTAATGAAGTTCAGAGAATGACCTTTTAAAATACACATCCTTATGCCTAATGTAGTTCCATC
ATATGTCCGATCGCAGGAGGCCCTGACATGATGAACAACAAGTTCTTTCCCATCGTAGACGTTCGCGATGTTACCGACGC
ATTGCTCCTGTTGTACAACAAGGCAGGGCCATCTGAGAGATACATATGCTCACTGGACCAAGTGGACCTAAAGGATTTGC
TGGCAATCATGAAGAACATGTACCCTAGCTACACTTATGCAGACAAGTAAGTGTCATGGCATCAAGACTATCAACACCAT
GTCATAGCTTGCTTATCATATACTACGAAGGATTTTCATTACGAAATTTTGGGTTGGCAGGATGGTTGATGTGGACTTTA
ACGTTGGAGTCACTTCGGACAAGCTGAAGAATTTAGGGTGGAAACCAAGGAAGATGGAGGAGACACTCGTGGATTGTATC
GAGTCCTATGAAAAAGCAGGGCTTCTTGGGGTTACAGACGATGAACCATGCCGGCTTCCATTCATCTAACGAATGCCACC
TATCCAGGAATGAGAATGATCCCATAATTGTGCCATTGATTCTGCATTTGGCCTGAAACATCATGAAATGTGTTTTGTAA
AAATAAGCACGGGTTAGGTCTCTATTTCTCGACTCCTCCACTAGTCCATTCAGGATGGATGCAAATGTAAAAATTGTGCA
TTTGTGCTCACTTCCGTCAAGAGAAAGCGGACTCTGGAGGAGTACTCTAAAAGCAGTGACTACAGAGTTATGAACACTAG
TAGTACACCCGTGCGTTGCTACGAGCTACAATGCATACAAATAAATCACACAAATGGTCACATCCAAGGTCAAATCTTAT
TCCTCATACATCCGAGCATGTTAGGACATTAAGCAAGCTCCACAAAATTTAACCGTCTGGATAGTCCCCCCGGGCTACAA
TGCATACAAATAAATCACACAAATGGTCATATCCAAGGTAAAATCTTATTCCTCATACATCCGAGCATGTTAGGATATTA
AGCAAGCTCCACAAAATTTAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCGACGCACACTTACCTTTCTTGTTGGACATTCCACTTACCGCTCGGATTCCCGTCTTAACAGGACATTTCTCGCTGG
GGCCCTCGTTATTAACTCTTGAAGCAACCAACAACCCTTCTATCGTAACCAAAAAATTGTACGGCTTGATGAAAATAATA
TATGGACCGCTCGCTCATGCTGTTTGTTGCAAAGAATCTCACATGAAATGTTATACATATGCCACATTGGTTCACTATCC
TATCTATAATGCCGTGACAGTAGTTTAGAAACTCTCCTAGCACTCCAAATACCGGCAACAAAATCACCAAATATATAGCA
TCCGCAGCTACCATGAAATAGGACACTAAACAACATTTGCAGCAAGCAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACATAGCTGACAAATGTGACTAACTCTGTAAGAAGCTTTGCCTTCAGAACC
TAAAAATGGTGTAGTCCCATTACTACTTCAGCCGCTCTCTGATCTCAAT
>chr3B_1423
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGTAGTA
CACCCGTGCGTTGCTACGGGCTACAATGCATA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------CAAATAAA
TCACACAAATGGTCATATGCAAGATCAAATCTTATTCCTCATACATCCGAGCATGTTAGGACATTAAGCAAGCTCCACAA
AATTTAACCGTCTGGATAGTCCCCCCGGGCTACAATGCATACAAATAAATCACACAAATGGTCATATCCAAGGTAAAATC
TTATTCCTCATACATCCGAGCATGTTAGGACATTAAGCAAGCTCCACAAAATTTAACCGTCTGGATAGTCCGGACCCCTC
CCCCCTCCCAAATC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CAACCCATATATCATCCCAACATGCGG--
----------------------------------------------------------TCCCAACACAAAAACCCCACCC
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CGATGCACACTTACCTTTCTTGTTGGACATTCCACTTACCGCTCGGATTCCCGTCTTAACATGACATTTCTCGCTGG
GGCCCTCGTTATTAACTCTTGAAGCAACCAACAACCCTTCTATCCTAACCAAAAAATTGTACGGCTTGATGAAAATAATA
TATGGACCGCTCGCTCATGCTGTTTGTTGCAAAGAATCTCACATGAAATGTTATACATATGTCACATTGGTTCACTATCC
TATCTATAATGCCGTGACAGTAGTTTAGAAACTCTCCTAGCACTCCAAATACCGGCAACAAAATCACCAAATATATAGCA
TCCGCAGCTACCATGAAATAGGACACTAAACAACATTTGCAGCAAGCAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACATAACTGACAAATGTGACTAACTATGTAAGAAGCTTTGCCTTCAGAACC
TAAAAATGGTATAGTCCCATTACTACTTCAGCCGCTCTCTGATCTCAAT
>chr2A_1423
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGTAGTA
CACCCGTGCGTTGCTACGGGCTACAATGCATA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CAAATAAA
TCACACAAATGGTTATATCCAAGGTCAAATCTTATTCCTCATACATCCGAGCATGTTAGGACATTAAGCAAGCTCCACAA
AATTTAACCGTCTGGATAGTCCCCCCGGGCTACAATGCATACAAATAAATCACACAAATGGTCATATCCAAGGTCAAATC
TTATTCCTCATACATCCGAGTATGTTAGGACATTAAGCAACCTCCACAAAATTTAACCATCTGGATAGTCCGGACCGCCC
CCCCCA--CAAATC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CAACCCATATATTATCCCAACATGCGG--
----------------------------------------------------------TCCCAACATGAAAACCCCACCC
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CGACGCACACTTACCTTTCTTCTCGGACATTCCACTTACCGCTCGGATTCCCGTCTTAACAGGACATTTCACGCTGG
GGCCCTCGTTATTAATTCTTGAAGCAACCAACAACCCTCCTATCCTAACCAAAAAATTGTCCGGCTTGATGAAAATAATA
TATGGACCGCTCGCTCATGCTGTTTGTTGCAAAGGATCTCACATGAAATTTTATACATATGTCACATTGGTTCACTATCC
TATCTATAATGTCGTGACAGTAGTTTAGAAACTCTCCTAGCACTCCAAATACCGGCAACAAAATCACCAAATATATAGCA
TCCACAGCTACGATGAAATAGGACACTAAACAACATTTGCAGCAAGCAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACAGAACTGACAAATGTGACTAACTCTGTAAGAAGCTTTGCCTTCAGAACC
TAAAAATGGTGTAGTCCCATCACTACTTCATCCGCTCTCTGATCTCAAT
>chr2D_1884
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-A------------------------------------------------------------------------------
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---CGACGCACACTTACCTTTCTTGTCGGACATTCCACTTACCGCTCGGTTTCCCGTCTTAGCAGGACATTTCTCGCTGG
GGCCCTCGTTATTAACTCTTGAAGCAACCAACAACCCTTCTATCCTAACCAAAAAATTGTACGGCTTGATGAAAATAATA
TATGGACCGCTCGCTCATGCTGTTTGTTGCAAAGAATCTCACATGAAATG-TATACATATGTCACATTGGTTCACTATCC
TATCTATAATGCCGTGACAGTAGTTTAGAAACTCTCCTAGCACTCCAAATACCGGCAACAAAATCACCAAATATATAGCA
TCCGCAGCTACCATGAAATAGGACACTAAACAACATTTGCAGCAAGCAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACAGAACTGACAAATGTGACTAACTCTGGAAGAAGCTTTGCCTTCAGAACC
TAAAAATGGTGTAGTCCCATCACTACTTCAGCCGCTCTCTGATCTCAAT
>chr5A_1884
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-A------------------------------------------------------------------------------
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---CGACGCATACTTACCTTTCTTGTCGGACATTCCACTTACCGCTCGGATTCCCGTCTTAACAGGACATTTCTCTCTGG
GGCCCTCGTTATTAACTCTTGAAGCAACCAACAACCCTTCTATCCTAACCAAAAAATTGTACGGCTTGATGAAAATAATA
TATGGACCGCTCGCTCATGCTGTTTGTTGCAAAGAATCTCACATGAAATGTTATACATACGTCACATTGGTTCACTATCC
TATCTATAATGCCGTGACAGTAGTTTAGAAACTCTCCTAGCACTCCAAATACCGGCAACAAAATCACCAAATATATAGCA
TCCGCAGCTACCATGAAATAGGACACTAAACAACATTTGTAGCAATCAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACAGAACTGACAAATGTGACTAACTCTGTAAGAAGCTTTGCCTTCAGAACC
TAAAAATGGTGTAGTCCCATCACTACTTCAGCCGCTCTCTGATCTCAAT
>chr5B_1884
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-A------------------------------------------------------------------------------
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---CGACGCACACTTACCTTTCTTGTTGGACATTCCACTTACCGCTCGGATTCCCGTCTTAACAGGACATTTCTCGCTTG
GGCCCTCGTTATTAACTCTTGGAGCAACCAACAACCCTTCTATCCTAACCAAAAAATTGTACGGCTTGATGAAAATAATT
TATGGACCGCTCGCTCATGCTGTTTGTTGCAAAGAATCTCACATGAAATGTTATACATATGTCACATTGGTTCTCTATCC
TATCTATAATTCCGTGACAGTAGTTTAGAAACTCTCCTAGCACTCCAAATACCGGCAACAAAATCACCAAATATATAGCA
TCCGCAGCTACCATGAAATAGGACACTAAACAACATTTGCAGCAAGCAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACAGAACTGACAAATGTGACTAACTCTATAAGAAGCTTTGCCTTCAGAACC
TAAAAATGGTGTAGTCCCATCACTACTTCAGCCGCTCTCTGATCTCAAT
>chr3D_1884
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-A------------------------------------------------------------------------------
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---CGACGCACACTTACCTTTCTTGTCGGACATTCCACTTACCGCTCAGTTTCCCGTCTTAGCAGGACATTTCTCGCTGG
GGCCCTCGTTATTAACTCTTGAAGCAACCAACAACCCTTCTATCCTAACCAAAAAATTGTACGGCTTGATGAAAATAATA
TATGGACCGCTCGCTCATGCTGTTTGTTGCAAAGAATCTCACATGAAATGTTATACATATGTCACATTGGTTCACTATCC
TATCTATAATGCAGTGACAGTAGTTTAGAGACTCTCCTAGCACTCCAAATACCGGCAACAAAATCACCAAATATATAGCA
TCCGCAGCTACCATGAAATAGGACACTAAACAACATTTGCATCAAGCAATCAATTTATGCACCAAGCACACTGAGCAGAA
GCAACAAGCTATCAAGATTTCTTCTACTCACAGAACTGACAAATGTGACTAACTCTGTAAGAAGCTTTGCCTTCAGAACC
TAAAAATGGTGTAGTCCCATCACTACTTCAGCCGCTCTCTGATCTCAAT
>SNPs
SSSSSSSSSSSSSSS----------------------------------SS---S-------S-----------------
----S------S----S--------S--------------------------------SSS-------------------
-SSS---SSSSSSSSSS-----SS--------SS-S-S-S---S-SS-SSSSSSSSSSSSSSSS-------S--------
---S-----S--------S-----SS-S---S-------S----------S----S----------------SS-SS---
----S---------------SS---------SS-S----------------------SSSS----S--------S-S---
S-SSSSSSSSS------------------------------------S---S---S-SS----------S----------
----S-S---------S------S-----------------SS--S-------S-------SS---S-S--------SS-
-S---------S-------------SSS--SS-S------------S-----S-SS---------------SS-------
---S-S------------S-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
----------------------S-------S--------------------S-------------------S--S-----
----------------S--------S-------------S--------------S------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS----------------------------SSS----S------S---------S------SS-----
---S-----------------S----S--S---------S--------S-------------------------------
---------S---------S---S---S------------------------S-----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
------------S------S------------------------------------------------------------
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-------------S-----S------------S-S---------------------------------------------
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-------------------------------------------S------------------------------------
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------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
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--------------------------------------S-----------------------------------------
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----------------------------------------------S---------------------------------
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----------S--SS----------------------------------
>forward_743
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---TTGCACCGCGAGTCAGTATT---------------------------------------------------------
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>reverse_7295
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--------------CCCCATCACTACTTCAGCCG---------------
