>input_sequence_81218
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--------------------------------------------ATGGCCCGCACGAAGCAGACGGCGCGCAAGTCCACC
GGCGGCAAGGCGCCGAGGAAGCAGCTGGCGACCAAGGCGGCGCGCAAGTCGGCCCCGGCCACCGGCGGCGTGAAGAAGCC
CCACCGCTTCCGCCCGGGCACCGTGGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTCATCCGCAAGC
TCCCCTTCCAGCGCCTGGTGAGGGAGATAGCGCAGGACTTCAAGACCGACCTCAGGTTCCAGTCCTCCGCCGTCTCCGCC
CTGCAGGAGGCCGCCGAGGCGTATCTGGTGGGGCTCTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGCGTCAC
CATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGGGAGCGCGCCTAG-------------------------
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>chr7A_1_TraesCS7A01G102900
AGTATTTGATGTCGCAAAAAACAAAAAAATATTGTATAAAGAGGCTTGAGTGGATAAAAAAATGCCTCCAAAACAAAGCA
TTCTACTCCCTCTGTTCCGAATTACTTGTCTTGGATTTGTCTAGATACGGATGTATCTAGGCTCATTTTAATGCTAGATA
CCTCCGTATCTAGACAAATCTAATACAAGTAATTCGGAACGGAGGGAGTAGAAAATTAGTACAAGGATACAAACCCTGCA
AAATTCGCATGAAGCTCCTTTGAATCAAAAAAAAAAAAACTCGTATGTGCATTTTTACATCCCACCCACGGATCCACTAC
ACAGCACACCTCACCCCAGCCAATCACGTCACGCCGACCCCCACCCCACGGATCGCCCCCCACGATCCGCGTGCTCACCC
CGAAACCCGATCGCAACCGTCCATTCCCCTCCGATCCAACGCCCCAAACTTCGTCTCCCTCCTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTATTTAAACCCGCGCCTCACCACCAGACCACACCACAGCTCAAATCCCACGCAGGCGAAG
CA--CCCACTCAAACCCTAGCCTCCTCC--CCACTCCATCTCCGATGGCCCGCACGAAGCAGACGGCGCGCAAGTCCACC
GGCGGCAAGGCGCCGAGGAAGCAGCTGGCGACCAAGGCGGCGCGCAAGTCGGCCCCGGCCACCGGCGGCGTGAAGAAGCC
CCACCGCTTCCGCCCGGGCACCGTGGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTCATCCGCAAGC
TCCCCTTCCAGCGCCTGGTGAGGGAGATAGCGCAGGACTTCAAGACCGACCTCAGGTTCCAGTCCTCCGCCGTCTCCGCC
CTGCAGGAGGCCGCCGAGGCGTATCTGGTGGGGCTCTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGCGTCAC
CATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGGGAGCGCGCCTAGGTTTGGCCGTAGCAGTTCGTGTCTT
GCGATCTGGTTGTACTAAGGAAATGT----GCTGGGTTTCTCTGTAGTGTTGATAAG-----------------------
-CTTTCCAGATGT--TCTGACGCTGAAATGAAATGGT-AATGAAAAGTTCAGTTATCTTTTGATGCAATTTTGTCCCATG
TGTGTTATTTGTTTCTCTTGACCCCTGGTAATTAGATGATTGGAGAGCTCTCATGACTTGAGCTAGGAAACATATGACCT
GCTACTTAGATAATTGAAAAACACCACATATGGGGTTGAAGAACGGATGCTGTAACTAAATTTGTCCCTTGGATTTGGTG
TCTTGGTTCTGCTCTGTTTATTTTGTTTGTGTTGCCCTTAGATTCAGTTATCTTCTGATGGCAAAGGAAAGTTCAGTTAT
CTTCTGATGCAATTTCGTCCCCTGCTGCCATTTGTTTTTCTTGATCCCTGGTAATTAGATGATCGATAAACTCATGACTT
AGATGACTGGAAATTGAAAAAC-------------------AATTGACTTAACATCGTCCCTT-GATTCGGTGATTCTGT
---TCTGCTCTGTTATTGTGTTTGTGTTGTTGTAAGATTCAGTGCTCTGTTTCCTATCAGGTGAATTTTGTGCAGTGTAC
TAGGCCGATTGTCAGTCCATTTTCTACCTGCCACTCTGAGAAGCCAATAGCAGCAGAGCTTGGGGGCAGGGTGAGATGGA
GATGGTGTGGATTCCGGTTCTGTTCAAACCATTGCCGAGTGCATATGGCAATGAGAG-GAGCACATTGCCTCTGATATCA
CCAAGGTGAAA--CTTATATCCATTTTTGTTGGTCCTTGCTGTGCAACAAGTGCTTCTCCGCACTAG-------------
---CAGTTCAGGCAAATATGGGAATGTTCAGAAACCATTTTTGGTTCATAACTTTACCAGCAATGCATGGATTTGAGTCC
CATATATGGA-TTTTGTCTAGTCAAAGGATCATAATAAGTTGAAGTTATTTCTCTTAATACCATCCAGCTTTCCCTTGCT
ATATTTGCA-----------------------------------------------------------------------
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>chr4A_297
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--------------------------------------------------------ACACCCCACCCACGGATCAGCTTC
ACACCACACCTCGG-CCAGCCAATCACGTCACACGAAACACCCTCCCACGGATCGCCCCCCACGATCCGCGTGCTCACCC
CTAAACCCGATCCCAGCCGTCCATCTCCTCCCGATCCAACGCTCCAAACTTCGTCTCCCTCCTCCAGCCCGCGCCTTC--
-CCCCCAAAATTTCCCCGACCCGCGCCCACCCCTCGC------C------------------------------------
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--------------------TATTTAACCCCGCGCCTCACCACCAGACCACACCACAGCTCAAATCCCCCACCGGCGAAG
CATCC------AAACCCTAGACTCCTCC--CCCCACCAGCTCCGATGGCCCGCACGAAGCAGACGGCGCGCAAGTCCACC
GGCGGCAAGGCGCCGCGGAAGCAGCTGGCGACCAAGGCGGCGCGCAAGTCGGCCCCGGCCACCGGCGGCGTGAAGAAGCC
CCACCGCTTCCGCCCGGGAACCGTGGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTCATCCGCAAGC
TCCCCTTCCAGCGCCTCGTCCGTGAGATCGCGCAGGACTTCAAGACCGACCTCCGCTTCCAGTCCTCCGCCGTCTCCGCC
CTGCAGGAGGCCGCCGAGGCGTACCTGGTGGGGCTCTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGCGTCAC
CATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGCGGGGAGCGCGCCTAGGTTTGGCTGTAGCAGTTCGTGTCTT
GCGATCTGGTTGTA---AGGAAATGTGCTGGCTGGGTTCCCATGTAGTGTTGATATGATCTTTCTTCTCGTCTCTGGTGA
TCTTTCCTGATGTAGTGTGATGCTGAAACGAAATGGC-AATGAAAAGTGCAGTTATCTTCGGATGCAAATTTGTCCTGTG
-GTGTCATTTCTTTGCTGCTTAATTGTTTTAATCATGT------------------------------------------
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----------------------------------------------CTTGCTGATTAGATGGTTGAAGAACACATGTCCT
GAATTAGTGTTGCACTGATGGGATTGAACAATGCATGATCTAATTGATTTAACACTGTCGCTTGGATTTGGTGATTCTGT
TAATCTGCTCTGTTATTTCTTCTTGGTTGCTGTGAGATTCAGTTGTCTTTTTCCTATCAGGT-AATTTTGTACACTATGC
AAGGCAGATTGTCTTTCCATTTTCACCTT----------------------------------GGGCAGGTTGAGAAGGA
GATGGACTGGATTCCTGATCTGTTGAAACCATTGCCAGGTGCATATGGCAATGAACATGAGCACAGTGTGTCTGATATCA
CCAAGGTGAACTTCTTGTATCCAATTTTGTTTGTCCTTGCTTTGCAGTTCTATAGAGATATACAGTGGCAATCAGATCTC
TTTCAGTTTAGGCATCTACGGGAACGTTCAGAAACAATTGCCTCTTCATAACTTTACTAGCAGTGCATGGGTTTGGGTCC
CGGGTGTGGATTTTTGTCTAGTCAAAGGATCAGCAGTGGA--AAATATTTTTTCTGAATACGATGTGTGCTGGGTGTCTC
--TAGTGTTGATATGATGCTTGCTGTCTGGTGATCTTTCTTTCCTGCGTTGTGACGCTGAAATGAAGTGGCAACGAAAAC
TTCAGTTC-TATGATGCAAATTTGTCCTGTCGTCTCATTTGTTTGCAGCTTAATTTTTTTGGTCATCTCCTGCTAACAAG
ATGATGAAAAAAAAATACATGACCTGAACTAATGTTGTACAGATGGTATTGAACACTATTATATTTTGGTTTAACATTGT
CGCTTTGATTTTGGTGATTCTGTCGGTCTGCTCTGTTATA--TTGTTTGGCTGCTGTGATATTCAGTTGTCTTTTCTCCT
TCTGGAAAATTATGTACGTGCGACTCAGAAGCGAATAGCAGCAGAGCTCGGGGGCAGGATGCCACGGTGAGAAGTAGTGG
ATTCCTGCTGTTAAAAAACATTGCCAGGGTGTACATTGCCTCTGATATCGCCAAGCTGAACTTCTCATATCCATTTTTGT
TGGTCCTTGCTGTGCAACAAGCGCTTCTCCGCACTAGCAGTTC
>chr7D_336
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---------------CCAGCCAATCACGTCACAGGAATCCCCATCCCGCGGATCGCCCCCCACGATCCGCGTGCTCACCC
CGAAACCCGATCGCAGCCGTCCATCTCCCTCTGATCCAACGCCCCAAACTCCGTCTCCCTCCTCCAGCCCGCGCCTTCTG
CCCCCAAAATTTTCCCCATCCCCCGCCCACCCCTCCCCCCCATC------------------------------------
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--------------------TATTTAACCCCGCGCCTCACCACCAGACCGCAGCACAGCTCAAATCCCCCACCGGCGAAG
CATCCCCACTCAAACCCTAGCCTCCTCCACCCCCTTCAGCTCCGATGGCCCGCACGAAGCAGACGGCGCGCAAGTCCACC
GGCGGCAAGGCGCCGAGGAAGCAGCTGGCGACCAAGGCGGCGCGCAAGTCGGCCCCGGCCACCGGCGGCGTGAAGAAGCC
CCACCGCTTCCGCCCGGGAACCGTCGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTCATCCGCAAGC
TCCCCTTCCAGCGCCTCGTCCGTGAGATCGCGCAGGACTTCAAGACCGACCTGAGGTTCCAGAGCTCCGCCGTGTCCGCC
CTCCAGGAGGCCGCCGAGGCGTACCTGGTCGGGCTGTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGCGTCAC
CATCATGCCCAAGGACATCCAGCTCGCACGCCGCATCCGTGGGGAGCGCGCCTAGGTTTGGCCGTAGCAGTTCGTGTCTT
GCGATCTGGTTGTA---AGGATGTGT----GCCGGGTTTCACTGTAGTGTTGATATGATGTTTG-----GTCTGGTGAGA
TCTTCCCTGATGC--TGTGACCCTGAAATGGAATCGCGAATGAAAAGTTCAGTTATCTTATGCATGTC---TGTCATGTG
-GTGTCATTTGTTTCCTGCGTAATTGTTAATATCATCT------------------------------------------
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----------------------------------------------CCTGTTAATTAGATGACTGAAAAACACATGACCT
GAACTATTGTTGC--------------------------------------ACACTGTGGCTTGGATTTGGTCATTCTGT
TAGTCTGCCCTGTCATTTCTTCTTGGTTGCTGTGAGATTCAGTGGTATTTTTCCTATCAAGT-AATTTTGTACACTATGA
AAGGCAGATTGTCATTCCATTTTCTACCTGTCGAGAAGGCAAGAGGGCTTGGCTGCTTGA----GGCAGGATGAGAAGGA
GATGAAATGGGTTCCTGATCTGTTGAAACCATTGCCGGGTGCATATGGCAATGAACACGAGCACAC--TGTCTGATATTA
CCAAGGTGAACTTCTTGTATCCAATTTTGTTTGTCCTTGCTTTGCAGTTCTATAGAGATGTACAGTGGCAATCAGATCTC
TTTCAGTTTAGGCATCAATGGGAATGATCAGAAACAATTGCCTGTTCATAACTTTACTGGCAGTGCATGGATTTGGGTCC
CGGGTATGGA-TTTTGTCTAGTCAAAGGATCAGCAGTGGA--AAATATTTTTTCTGAATATGATGTGTGCTGGGTGTCTC
TGTAGTGTTGATATGATGCTTGCTGTCTGATGAT------TTCCTGCGTTGTGACGATGAAATGAAGTGGCAATGAAAAG
TTCAGTTCTTATGATGCAAATTTGCTCTGTGGTCTCATTTGTTTGCGGCTTATTTTTTTT-GTCATCTCCTGCTAACAAG
ATGATGAAAAAAAAATACATGACCTGAACTAATGTTGTACAGATGGTATTGAACACTGTTAAACCTTTGA----------
---------TTTGGTGATTCTATTGGTCTGCTCTGTTATATTTTGTTTGGCTGCTGTGATATTCAGTTGTCTTTTCTCCT
TCAGGAAAATTATGTACCTGCGACTCAGAAGCCAATAGCAGCAGAGCTCGGGGGCAGGATGCCACGATG---AGTAGTGG
ATTCCTGCTGTTAAAAAACATTGCCGGGGTGCACATTGCCTCTGATATCGCCAAGGTGAACTTCTCGTATCCATTTTTGT
TGGTCCTTGCTGTGCAACAAGTGCTTCCCTGCACTAGCAGTTC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--------------SS--S-
---S--------SSS-----------------S-SS-S-----S------------------------------------
---------------S--------SS--------------------------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS-------S----------------------------------------S-S-S-------
--------------------------------S-----S-----------------------------------------
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------------------S-------------------------------------------------------------
----------------S--SS-S-----S---------------------------------------------------
-----------------------S--------------------------------------------------------
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--------------SSS-----------------------S--------------S------------------------
-------S--------S-------------------S----------------------S--------S-------SS--
S----S---------SSSS-SSSSSSSS---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S------------S--S----S------S-
SS--S-S--SSSSSSSS-SSSS-------------------------S------SS---S--------S-----------
-----------------SSS-S-SS----S---S----------S---S-------------S--------S--S-S-S-
S----S--------S---------------S-SSSSS-SS---SSSSSSSSSSSSSSSSSSSS-------S-----S---
-----SS--------S-S------S------------S----------------SSS--------S--SS----------
----------S-----S------S-------S---------S----SSSSSSSSSSSSSSSSSSSS--------------
--------S-----SS-------------------S---SSSS--------------S----S------------S----
-SSS----------------------------SS-SSS-SSS--S-SS---S---S-----S--SSSSSS-SSSSS-SSS
SSSSS--SS-----------------------------------------------------------------------
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>forward_324
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----------------------------------------------------------------CCCACGGATCCACTAC
ACAG----------------------------------------------------------------------------
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>reverse_1846
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-----GATGCAATTTCGTCCCCTGC-------------------------------------------------------
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