>input_sequence_81185
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---------------------------------------------------ATGTCGTCGCTCGCGGTCGGCCGCGGGCT
GGACCTGGACTTGGAGTTGGGGAACTGGTTCGCGGGTCTCTTCTCTGGGCCGGAGCTTGCGGCGGCGGAGCTGCTGCTGC
AGCTCAGCGTTCTCAGAGAGGCGGAGGCGGAGGCGAAGGCGAAGGCGGAGCCCACCAAGTCCTCGCGGTGTTCGGCGGGC
TCGCGCTGCGAGGGGCTGTCCGTCGAGGCAGAGGAGCGGGTCGTCGAGGAGATTCCAGCGTCGGCGTCCACGGGA---CT
GGACAGGCGGGCGAGGAAGAGGTACCGCCTGCTGTCGGAGCTCTACGCCGACACGATCCTCGC-----------------
-------GAAGAAGAGGAGGAAGACGCACCACGACCACGGCGGGCCGTCATCG------GAGTCCAAGGAGACGAGGTAC
GGCGGAGACTACTAG-----------------------------------------------------------------
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>chr5B_1_TraesCS5B01G333100
GGTGGGAAGGGGATCTCTCTGTTTTTCTGCAGGCATGACGTGCATGGGGTTACGGAGAGTCGGAGACGCATCTGGGGGAG
GGGGAAGATGCATCCAACGGTTATAGAAAGGTCAATCGGACGGCGGGGGACTGAACCGGTCGAGGGAATCCGCCGGTCGA
CCAGCGCGACTCTATGTACATTGCTTCGGTTGCAACCGGCACAG----GAGTGCACAAGATGACAAGAGTACAGGATCCA
AGTGGCTTT-GGATGCGGGAGTACACGTACGCCCAGACCCCACGCGCTTTCGGGTTTGCGTTCAAGACGTACGGCGCCTG
GCGAAGACCTCGACGACCGCGCTAAGCAAACCGCAAAAGCAAAAGCTCAGAGGAGAAA------GGCGACGGCGACGGCG
ACTCCGACGCCATACAGCAGCAGTTCGCAGTTCCTTGCAGGAAACAAAATTTGGTGCAATCTCCGATTTTTTTCAGACAA
CGACGACTTCGCATGTGCTACGTTGCTGTATCTGCTTTTCGTCTAAAAATCGCTTTGCGTATGCATGGTTAC--TACTGC
TCACCGGCTACTCGATTACCATTTCTCATTTTTCACGTACGACTTCATCCTTAACACTCCCTCCGTCTCAAAATAAGTGT
CTTGAGCTTAGTATAAATTTGTACTAGAGTTAGTTTAAAGTTGAGACATTTATTTTGGGACGGAGGAAGTAGTATAGACA
CAATTTTTTTAGACAGGATCCTGAACTGTATACCACATAAGAAACTGCTCAGTGGCCATTCAGCAACACACGCTTGGCAG
AGA--------CGTGCGTATGCGCATTGCACACACAACGACCCAGCCGGCTCGTAACCACGGTGGCGTCTCGGCTATAAA
GCCGCGCGTG----------------------------------------------------------------------
------------------------------------------------------------CAGCCCACGCCCATAACCCG
TTTCTTCTCATCCGCACCCACCCATCCCCG------AGTCCCC--GAGAACAAAAAAAAAAGT------------TATTC
CGATTCGCTCCTCCTCCCGCGAAGCAACTGGTCTGCCGGCGCCAGCCAACCATGTCGTCGCTCGCGGTCGGCCGCGGGCT
GGACCTGGACTTGGAGTTGGGGAACTGGTTCGCGGGTCTCTTCTCTGGGCCGGAGCTTGCGGCGGCGGAGCTGCTGCTGC
AGCTCAGCGTTCTCAGAGAGGCGGAGGCGGAGGCGAAGGCGAAGGCGGAGCCCACCAAGTCCTCGCGGTGTTCGGCGGGC
TCGCGCTGCGAGGGGCTGTCCGTCGAGGCAGAGGAGCGGGTCGTCGAGGAGATTCCAGCGTCGGCGTCCACGGGA---CT
GGACAGGCGGGCGAGGAAGAGGTACCGCCTGCTGTCGGAGCTCTACGCCGACACGATCCTCGC-----------------
-------GAAGAAGAGGAGGAAGACGCACCACGACCACGGCGGGCCGTCATCG------GAGTCCAAGGAGACGAGGTAC
GGCGGAGACTACTAGA--------GAGGAGAGAAAGTACTA-----------CTTACACGGGTATAAAATGGCTCTTGTG
TAATTACGCCGTGGTTTCCCCCTGTCCCCAACGCCGTGGTCCTGCAT-GGTTAGCGCCTCCAGTTTTGAATTTGAAATTT
GAATCTGGGTT----CCGAGATCTCCAAACATTAGAGCTC--------CAAAAGGGTTCCCTCCTCCACGATTTGAATTT
GAATCTTTCT------------------------TCTCTCTCTCTCTCTCTCTCAACTTGACAAGCATGTGTGACTAT-T
AAGGACCCTAATAACTGGCATTCGCTCCCCAACTTGACAAGACCGGAGTTGACCCATCAGGCTGGTTGTAATGGGGAGTA
TCATATACTAGTATCATGCATATGATACTAGTGTATGATACTACCTCCCTAATGCATAGTATTATATATTAGTATCATGT
AGTACTCTATTTATTGTCATGCATGACACAAAGTAGCATAGCATTTAATATGATACGGTATCATGATATGATACTACATC
CTCTTTTTCTTCATTTAATGCTATGACACCTCATCAAAATTGTCTAGTTGGCGCGCATGATACTAACTATGATACTATCA
TTACGACCAGTCTCATGATGCGGGAATGGACAGCCCAAAAGAGTA---GTATATGAGTACCATAGTTGTATGTATAGTTT
GCTTGCAAGCGCACGCCAGTGATCTTGGCATACTCTAACCGTGCTTTTCATGATGTTTTTGTGCTAATTTTCTCCAAAAA
ATAGGATGCAATTTTTTTTCTTCCTTTCAACATATGCTTGTCGTAATGTTCATGGA---TTCTTGAATGATACATGGGCA
GTTCCAGCTCCAAAGCTAGCTACTCCCTCCGTTTCTAAATATAAGACCATTTAGGGTAGTCTATATCTTGGCAAGTAGAT
AGCTTGATCTTATCTTGGCAAGTTGAAGCAATATTTATACGCAAGACTAGAGTTGTTGTTAATTAGAGTATGAACACATG
AAAGCTTTATGTTAGTCACCTTTTTTGAGGTGTACGTA
>chr5A_176
GTACAT--------------------------------------------------------------------------
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---------------------TGCTTCGGTTGCAACCGCCACAGGAGTGAGTGCACGAGATGACAAGAATACAGGATCCA
AGTGGCTTTTGGATACGGGACTACACGTACGCCCAGGCCCCACACGCTTTCGGGTTTGCGTTCAAGACGTACGGCGCCCG
GCAAAGACCTCGACGACCGCGCTAAGCAAACCGCAAAAGCAAAAGCTTAGCGGGGAAAGGCGACGGCGACGGCGACGGCG
ACTCTGACGCCATACAGCAGCAGTTCGCAGTTCCTTGCAGGAAACAAAAATTGGTGCCATCTCCGA-TTTTTTCAGACAA
CGACGGCTTCGCATGTGCTACGTTACTGTATCTGCATTTCGTCTAAAA-CCGCTTTGTGTATGCATGGTTACTGTACTGC
TCACCGGCTGCTCGATTACGATTTCTCATTTTTCACGTCCGACTTCATCCTGAATATACTACGTCGACCAATAT------
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---TTTTCTTAGACGGGATCCTGAACTGTATGCCACATAAGAAACTGCTCAGCGGCCATTCAGCAACACACGCTTGGCAG
AGAGCCAGAGACGTGTGTATGCACATTGCACACACGACGACCCAGCCGGCTCGTAACTACGGTGGCGTCTCGGCGAGCAT
TACTAATAGAATCCTTAAATCCTCAAATCTTCGCTAGCGTTTTAAGGGTTCAAAAATGATCTTATTATGCACTTTTACAG
GTTAAAAAACAGGAGTAAAGATTAGAGCCATCAAACCCATCCTTATAACGGAATATTTTACAGCCCACGCCCATAACCCG
TTTCTTCTCATCCGCACCCACCCATCCCCG------AGTCCCCCCGAGAACAAAAAAAAAAGT------------AATTC
CGATTCGCTCCTCCTCTCGCGAAGCAACTGGTCTGCCGGCGCCAGCCAGCCATGTCGTCGCTCGCCGTCGGCCGCGGGCT
GGACCTGGACTTGGAGTTGGGGATCTGGCTCGCGGGTCTCTTCTCTGGGCCGGAGCTTGCGGCGGCGGAGCTGCTGCTGC
AGCTCAGCGTTCTCGGAGAGGCGG------------AGGCGAAGGCGGAGCCCACCAAGTCCTCGCGGTGTTCGGCGGGC
TCGCGCTTCGAGGGCCTCTCCGTCGAGGCAGAGGAGCGGGTCGTCCAGGAGATTCCAGCGTCGGCGTCCACGGA---GCT
GGACAGGCGGGCGAGGAAGAGGCACCGCCTGCTGTCGGAGCTCTACGCCGACACCATCCCCGCGAAATCCGATGCCGCCG
C---GAAGAAGAAGAGGAGGAAGACGCATCACGACCACGGCGGGCCGTCATCG------GAGTCGAAGGAGACGAGGTAC
GGCGGAGACTACTAGA--------GAGTAGAGAGAGTACTA-----------CT-ACACGGGTATAAAATGGCTCTTGTG
TAATTACGCCGTGGTTTCCCCATATCCCCAACGCCGTGGTCCTGCCAAGGTTAGCGCCTCCAGTTCTGAATTTGAAATTT
GAATCTGGGTTCCGACCGAGATCTCCAAACATCATGAGCTCATCACCACAAAAGCGTTCCCTCCTCAACGATTTGAAATT
GAATCGTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGTTGTTTGTCCGAC-----CACGTGTGATTAT-T
AATGCTTGGTTT----------------CCAATTTGAGAAGACCGGAGTTGATACATCC---------------------
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---------------TGATGTGGGACTGGACAGCCCAAAAGAGTACTAGTATATGAGTACCGTACTCGTATGTATAGTTT
GCTTGCAAGCGCACGCCATTGATCTTGTCATACTCTAACCGTGCTTTTCATGATGTTTTTGGGCTAATTTTATCCAAAAA
AGTATGTAAAAGA----TTATTTTTTTCAACATATATTTGTCGA--TGTTCATGGCTTCTTCTTGAATGATACGTAGGCA
GTTCCAGCTCCAAAGCT---------------------------------------------------------------
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>chr5D_177
TACATT--------------------------------------------------------------------------
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---------------------TGCTTCGGTTGCAACCGCCACAGGAGTGAGTGCACAAGATGACAAGAGTACAGGATCCA
AGTGGCTTTTGGATGCGGGACTACACGTACGCCCAGACCCCACGCGCTTTCGGGTTTGCGTTCAAGACGTACGGCGCTCG
GCGAAGACCTCGACGACCGCGCTAAGCAAACCGCAAAAGCAAAAGCTTAGCGGAGAAA------GGCGACGGCGACGGCG
ACTCCGACGCCATACAGCAGCAGTTCGCAGTTCCTTGCAGGAAACAAAAATTGGTGCCATCTCCGA-TTTCTTCAGACAA
CGACGGCTTCGCATGTGCTAAGTTACTGTGTCTGCTTTTCGTCTAAAA-TCGCTTTGCGTATGCATGGTTGC--TACTGC
TCACCGGCTACTACAGT---ATTTCTCAATTTTCATGTACGACTTCATCCTGAATATACTACGCAGACGCATAT------
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---TATTTTTAGACAGGATCCTGAACAT-----CACATGAGAAACTGCTCAATGGCCATTCAGCAACACACGCTTGGCAG
AGA--------CGTA-----------TGCACACACGACGACCGAGCCGG-------------TGGCGTCTCGGCTATAAA
GCCGCGCGTG----------------------------------------------------------------------
------------------------------------------------------------CAGCCCACGCCCATTACCCG
TTTCTTCTCATCCGCACCCACCCATCCCCG------AGAACA---------AAAAAAAGTAGT------------AATTC
CGATTCGCTCCTCCTCTCGCGAAGCAACTGGTCTGCCGGCGCCAGCCAGCCATGTCGTCGCTCGCCGTCGGCCGCGGGCC
GGACCTGGACTTGGAGTTGGGGATCTGGTTCGCGGGTCTCTTCTCTGGGCCGGAGCTTGCGGCGGCGGAGCTGCTGCTGC
AGCTCAGCGTTCTCGGAGAGGCGA------------AGGCG------GAGCCCACCAAGTCCTCGCGGTGTTCGGCGGGC
TCGCGCTGCGAGGGCCTCTCCGTCGAGGCAGAGGAGCGGGTCGTCGAGGAGATTCCAGCGGCGGCGTACACGGA---GCT
GGACAGGCGGGCGAGGAAGAGGCACCGCCTGCTGTCGGAGCTCTACGCCGACACGATCCCCGCGAAATCCGCTGCCGCCG
C---GAAGAAGAAGAGCAGGAAGACGCACCACGACCACGGCGGGTCGTCATCG------GAGTCCAAGGAGACGAGGTAT
GGCGGAGACTACTAGA--------GAGTAGAGAGTAGAGCGAGTACTACAGTCT-ACACGGGTATAAAATGGCTCGTGT-
-AATTACGCCGTGGTTTTCCCCTATCCCCAACGCCGTGGTCCTGCAT-GGTTAGCGCCTCCAGTTTTGAATTTGGAATTT
GAATCTGGGTT----CCGAGATCTCCAAACATCAGAGCTC--------CAAAAGCGTTCCCTCCCCCACGATTTGAATTT
GAATCATTCT------------------------TCTCTCTCTCTAGTTGTTTGTCCGAG-----CGCGTGAATTATTAT
AAGGACCCTAATAACTGGCGTTCGCTCCCCAACTTGACAAGACCGGAGTTGATCCATCA---------------------
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---------------TGATGTGGGACTGGACAGCCCAAAAGAGTA------TATGAGTACCGTAGTCGTATGTATAGTTT
GCTTGCAAGCGCACGCCAGTGATCTTGGCATACTATA-------------------------------------------
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>chr5D_847
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-------------------------------------------------------------------TCTAGGCTATAAA
GCCGCGCGTG----------------------------------------------------------------------
------------------------------------------------------------CAGCCCACGCCTCCGGCCCG
TTTCTTCTCATCCGCAGCCATCCACCCACAGCCAAAAG-------------AAAAAAAGAAATCTTTTCAAAAAAAAATC
CGATTCGCTCCTCCTCTCGCGAAGCAACTGGTCTGCCGGCGCCAGCCACCCATGTCGTCGCTCGCTGCCGGCTACGGGCT
GGACTTGGACCTGGAGTTGGGGATCTGGTTCGCGGGCCTCTTCTCGGCGCCGGAACTGGCGGCGGCTGACCTGCTGCTGC
AGCTCAGCGTACTCGGAGAGGCGG------------AGGC------------CACGAAGCCCTCGCGGTCTTCGGCCAGT
TCGTGCTGCGAGGGCCTCTCCGTCGGGGTGGAGGAGCGGGTCTTCGAGGAGACCCCGTCGTCGCCGTCCACGGAGCTGCT
GGACGCGAGGGCGAGGAAGAGGTACCGCCCGCTGTCAGAGCTCTACTCCGACACGATCCCGCCGACCTCCGCCGCCGCCG
CCGTGAAGAAGAAGAGGAGGAAGACGCACCACGACCACCGCGGGGCGTCATCGTCATGGGAGTCGGAGGCCACGAGGTAC
GGCGGAGACTACTAGACTACTAAAGAGTAGAGG--------------------T-ACACAGGTAGAAGACGGCTCTTGTG
TAATTACCGCC---------------------------------------------------------------------
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>chr5A_847
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-------------------------------------------------------------------TCTAGGCTATAAA
GCCGTGCGTG----------------------------------------------------------------------
------------------------------------------------------------TAGCCCACGCCTCCGTCCCG
TTTCTTCTCATCCGCAGCCATCCATCCACAGCCAAAAGAAAA---------GAAAAAAGAAATCCTTT--AAAAAAAATC
CGATTCGGTCCTCCTCTCGCGAATCAACTGCTCTGCCGGCGCCAGCCACCCATGTCGTCGCTCGCCGCCGGCTACGGGCT
GGACTTGGACCTGGAGTTGGGGATCTCGTTCGCGGGCCTCTTCTCGGCGCCGGAGCTAGCGGCGGCGGACCTGCTGCTGC
AGCTCAGCGTACTCGGAGAGGCGG------------AGGC------------CACGAAGCCCTCGCGGTCTTCGGCGAGT
TCGTGCTGCGAGGGCCTCTCCGTCGAGGTGGAGGAGCGGGTCTTCGAGGAGACCCCGTCGTCGGCGTCTACAGAGCTGCT
GGACACGAGGGCGAGGAAGAGGTACCGCCCGCTGTCAGAGCTCTACTCCGACACGATCCCGCTCACCGCCGCCGCCGCCT
CCGTGAATAAGAATAGGAGGAAGACGCACCACGACCACGGCGGGGCGTCATCGTCATGGGAGTCGGAGGCGACGAGGTAC
GGCGGAGACTACTAGA--------GAGTAGAGG--------------------T-ACACAGGTAGAGGACTGCTCTTGTG
TAATTACCGCGTTGTTTCCCCCT---------------------------------------------------------
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>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS-----------------S-----------------------------------------
--------------------S---------------------------------------------------------S-
-----------------------------------------------S--S-----------------------------
-------------------------------------------------S-------S--------S-------------
-----S------------------S-----------------------S-------------------------------
-------------------S-------------------------------S--S-SS-SSSS-SSSS---S--SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS----------------------------S------------------------------------------------
---------------S------S------------S---------------------S----------------------
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---------------------------------------------------------------------------S----
----------------S-------------------------------S----------------S--------------
-----------------------S--------------------------------------------------------
--------------S---------SSSSSSSSSSSS--------------------------------------------
--------------S--S-------------------------------------------------------SS-----
-----------------------------------------------------------S--------------------
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---------------------------S-----S--------------------S-------------------------
-----------------------S--------------------------------------------------------
--------------------------------S---------------------S-------------------------
-----S---------------------------------------SSS-S-S-SSS-SS-SSSSS--S------S-----
-------------------S--------------------------------S------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----S----S-----------------------------------S----S-------------
-------------------------------------------------------------S---------S--------
-SSSSS-SS--SSSSSS--S--SS-----------SS------SSS---------S-----------------S-S----
-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_20
GGTGGGAAGGGGATCTCTCT------------------------------------------------------------
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>reverse_2205
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--------------------------------------------TAGTTGGCGCGCATGATACT----------------
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