>input_sequence_81144
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-------------------------ATGATACTACGAGATCACGTGGGAGCAGTCATTTTCGCGTCTTGCAGGTTCCTCC
CGAGATGTGCAAGTCCTCTTGAGGCTGAATTATCAGCCTGCATGGAGGGAGTTACCCTGGCTCTCGAGTGGAGCATGGCG
CCTCTCGTCTTGGAGATGGACTGTGCTGCTGCAGTAAGCATGATTAAGGAAACATCATTGGACAGATCCCCCAATGCGTC
TCTTGTTGGAGAGATTAAGAGGAAGCTAGCTGTAGGTAGGGAGCATGCAATCAGGTTGATTCCTAGAGAGCAAAACGGTA
CCAGTCATGCCCTTTCGCAAATGGGATGCTCGATCCCACGTACGGCCGTCTGGCTGCGTTCGGCACCTGACGAGATTGTT
GGTTTATGTAAGCAAGACTGTGGCGAATCCACTTGA--------------------------------------------
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-----------------
>chr3A_1_TraesCS3A01G184100
GAAAGGGCTTTTGTGGCGGGTCGGCAATGGAGAGAAGATCCGCATCTGGAGGGATCCGTGGATACCACGACCGACGTCCT
ATCGACCTATCTCTGTGCGTGGGACTTGCCGGCTACGGAGGGTGGCTGACTTGCTGGACGATGCTGGACGATGGCGTGAT
GATCTACTCCGCCAATACTTTCGATCGATGGACGTGGACTGGATCCTGACGATCAAGCCTAGCCCGCATCAGCTCGACGA
TGTCCTCGCCTGGGGCCCTGATCCCCGTGGCCTCTTCAGTGTAAGGAGTGCGTACAAGCTCGCCTTGGAGGAAAAAACTC
GCACCAATGCGTGCGCCACGAGCAGGGCACCGGACGGCACGCGTGCCGTCTGGAAGGCAGTGTGGGGGTGCCC-TGCTCC
CCCCAAGGTATGCGTTTTTGCATGGCGCGTTGCTACAAATTCTCTAGCCACTTTGGAAAATAAGCTTAAGCGAACTTTAG
CGATATCTGACATATGCTCCCTGTGTGGTATGGAACGCGAGGACACATTTCATGCCCTCTGCAGATGTCCGAGGGCACGA
GCTCTTTGAACGGCAATGGCGAAAACATGGAGTATGCCATGTGTGGATGACATCAACAACACTGGAACTGAGTGGATTCT
TCATCTCCTTGACGGCTGCAGCAACGATGAGCGCCTCCCAGTGATCATGACACTCTGGAGGAATTGGCATGTACGCAATG
AAATATACCATGAAAAGCCGGCGCCACCTGTGGAAGCATCGCAAAGGTTCCTAAGCAGCTACATCGACATTCTGCTTGGG
TTGCAGCAACATCC------------------------------------------------------------------
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------------------------------------------------------------------------------CG
AGGCCGACATCACCAAAGGAAAGATGGTTATCTCATACGATCACTCAAGATCCAAGGGCAAACGTGAAGTGACCGTGGCT
TCCTGTACCAGGCCGCCTGAGCAGTGGAGCAAGGCACCAGAGGGCTGGGTAAAGCTGAACGTCGATGGAGCATGGCGGGA
AGCTGATGGAACCGGTGGCCCGGGGATGATACTACGAGATCACGTGGGAGCAGTCATTTTCGCGTCTTGCAGGTTCCTCC
CGAGATGTGCAAGTCCTCTTGAGGCTGAATTATCAGCCTGCATGGAGGGAGTTACCCTGGCTCTCGAGTGGAGCATGGCG
CCTCTCGTCTTGGAGATGGACTGTGCTGCTGCAGTAAGCATGATTAAGGAAACATCATTGGACAGATCCCCCAATGCGTC
TCTTGTTGGAGAGATTAAGAGGAAGCTAGCTGTAGGTAGGGAGCATGCAATCAGGTTGATTCCTAGAGAGCAAAACGGTA
CCAGTCATGCCCTTTCGCAAATGGGATGCTCGATCCCACGTACGGCCGTCTGGCTGCGTTCGGCACCTGACGAGATTGTT
GGTTTATGTAAGCAAGACTGTGGCGAATCCACTTGAGTAATGAAATGATCCTTTCGCAAAAAAAAAAATAATCAGCCACC
ACATCACCAGAATTAGTCCAAAAATATTAAAGGGTCCAGAAAAATTTGAAATCTTTCCCAAAAAAGAGCAATACCATGCG
GATAATTCAAGGAAAGTTTGAAACTTTTTTCCCAAATAGAATAAAAAGTACATATTCAGGACCATTTTATTGTCAAAA--
---TGACC--AAACAATTAAATTTTCCAGAATATTTTGAAAAAAATCCTTA----------GTCACGCTAATCATTTTGT
GAAAATTTGAGCTT-TTTCGCAAACGTAATAAAAATACATATCGAGGACCATGTTTGGTCAAAATTTAACGACGAAATAA
ACTGTCCATACAAAATTGAAAATATTCTAAAACTAAACACTGTCATGCTAATTATTCTGAGAAAGTTTGAAACTTCTTTG
CCAAATAGAATTAGAAATACAACTAAAATCAAGCAAAGATGGAGAGGATATATATTTTCCAAGTATTTGTTAATCTATTT
GGCAAAAAAACTCG--AACTTACCCAAAATGATCAGCGTGGCAAGGCTCATTTTGGGAATGTTTTCAATTTTTTCCAGAC
AATTTTATATTTTGGACATTTTTTGACCAAAAATGGTCTGGGATATGCATTTTCGTTGTGTTTTTATTTTTTTTGGCAGA
AACTTTTGAATTTCGCCACAATGATCAGCATGGCAGTTTTAATATTTTAAACTGTTTTCAGTTTTTTTGGACAATTTTAT
TTTTTTGGTTTGACCAAAAATGGTCCTAAATATGTATTTTTGTTCTATATTTCGTTTTGTTTAGCAAAACAATAATGTCC
GCATGGTGGGGCTCATTTT-TTTAGGTTTTTCAATTTGTTCTGGACACTTTCATTTTTTGGGTCAAATATTAATGATATG
GCGGCTTACTAGGCGGTCAAGTCTTCAATACATGTCAAAACCTGCCAGAAAGTTGGAGTTCAGAGTTTAGAGTTGTAATA
TAAATTGTATTGGAGTT
>chr2A_1
GAAAGGGCTTCTGTGGCAGGTCGACAATGGAGAGAAGTTCCGCGTCTGGAGGGATCCGTGGCTACCACGACCGACGTCCT
ATCGACCTATCTCCGTGCGTGGGACTTGCCGGCTACGAAGGGTGGCTGACTTGCTGGACGATGCTGGACGATGGCGTGAG
GATCTACTCCGCCAATACTTTCGATCGATGGACGTGGACTGGATCCTGACGATCAAGCCCAGCCCGCATCAGCTCGACGA
TGTCCTCGCTTGGGGCCCTGATCCCAATGGCCTTTTCAGTGTAAGGAGTGCGTACAAGCTCGCCTTAGAGGAAAAAACTC
GCACCAATGCGTGCGCCACGAGCAGGGCACCGGACGGCACGTGTGCCGTCTGGAAGGCAGTGTGGGGGTGCCC-TGCTCT
CCCCAAGGTACGCGTTTTTGTATGGCGGGTTGCTACAAATTCTCTAGCCACTTTGGAAAATAAGCTTAAGCGAACTTTAG
CGATATCTGGCATATGCTCCTTGTGTGGTATGAAACGCGAGGACACATTTCATGCCCTCTGCAGATGTCCGAGGGCACGA
GCTCTTTGGACGGCAATGGCGAAAACATGGAGTATGCCATGTGTGGATGACATCAACAACACTGGAACTGAGTGGATTCT
TCATCTCCTTGACGGTTGCAGCAACGATGAGCGCCTCCCAGTGATCATGACACTCTGGAGGAATTGGCATGTACGCAATG
AAATATACCATGACAAGCCGGCGCCACCTGTGGAAGCATCGCGAAGGTTCCTAAGCAGCTACATCGACATTCTGCTTGGG
TTGCAGCAACATCCCGAGGTGTCAGGAAACCCAGGAGGATCCCATGCTGGCTGTTTTTGGTGGGATTCAAGGGGCTCTCC
CATGTAAATATTTGGGATTGCCTCTAGGTGTCAGGAAACCCAGGAGGGCCGAGGTGCAGCCGGTTCTGGACAAGATGGCG
GGAAAGCTATCGCCTAGGAAGGGTAGATTGCTAAACAGGATGGGAAGACTGGTTTACATCAACTCGGTGGTCACCAGCAC
GGCCATTTACTTCTTAACAGCCTTCCAACCGGATAAATGGTTCATTAGAAAGGTGGACAAACTCAGGAGAAATTTCCTAT
GGGAAATTGAAGAAAGAGCGGCTGGAGGCAAGTGTCTTGTAAACTGGAAGCGGGCCTGCTCCCCCAAGATTGTTGGTGGG
TTAGGTATCAAGAACATCGAGTGTTTCAGCCGGGCCTTTCGCTTGAGATGGGAATGGCTCAGATGGGATGACGTCGATCG
GCCGTGGAAAGGATCTCCTACTCCGTGCGACGCCATTGATAGACAGTTGTTCTCGAGCTGCTCCTCTATTCAGTTGGGTG
ATGGGCAGCTTGCGCTGTTCTGGATGGATAGATGGATGCATGGGGAGGCCCCTTATGTGATTGCACCGGAGATCTTCAAG
CTGGCGCGTTTTAAAAGAATTACTGTCAAAGAGGCTTTGACAAACGGCCGGTGGATGCAAGGTCTACAAAGAATGAACAA
CGAGGAGCAGCTAGCACAATTTGTCAGAATTTGGGAGGAGGTTCAGCAGGTGAGCCTTTCGGAGGCAAAGGATGTGATCA
GGTGGTCACTCACGGCAAACGGCTCCTACTCTGCATGCTCTGCCTATGCCATCCAGTTTGCGGCCGGGATCGAGCAGCTG
GATCTTGAGAGAATATGGAGATGCAAGATGGAGGGGAAGGTCAAATTCTACCTTTGGTTACTCCTGCAGAACAGAAATTG
GACGGCGGATAAATTATTAGCGCGGAATTGGCCACATAATGATCGATGCAAGTTGTGTGATCAAGAGGCTGAATCTGCAA
TGCATTTGACGCTGGGGTGTTCTTTTGCAAAGGAAATATGGTTCCACTTCCAGGGATCTAACAGTAGGATGTGGCGTATT
GCGTCTTCGGCTAGCTCGATTACAGATTGGTGGAGAAGACTATGCTCCGGACGCGGTCCGAAGAACAAGGTACAGGAGGA
TATCACGTTGGCGGCCTACATCGCCTGGCACCTGTGGAAGGAACGCAACAGGAGGATCTTTCAGCAAAAGGAATTAACTG
TGTTCATGTTGGCTGATTTAATCAGCGATGATGTAAAATTATACGTTGGGGCAACTGGTCAGGGTCAGGTTATTGCATAA
AACCTGCCCTGTGAGAAACATTAAGTGTTCCTGAACAGTCCCTATCTTATCCGGGAACATGTTCCAGAAGGATGTTGTAC
TGCTTGATTTTTCCTCTCTTCCATTATAATGCAAAAGCAGAGCTCCTGCTATTCCCGTCAAAAAAAAAAGCAACATCCCG
AGGCCGACATCACCAAAGGAAAGATGGTTATCTCATACGATCACTCCCGATCCAATGGCAAACGTGAAGTGACCGTGGCT
TCCTGTACCAGGCCGCCCGAGCAGTGGAGCAAGCCACCAGAGGGCTGGGTAAAGCTGAACGTCGATGGAGCATGGCGGGA
AGCTGATGGAACCGGTGGCGCGGGGATGATACTCCGAGATCACGTGGGAGCAGTCATTTTCGCGTCTTGCAGGTTCCTCC
CGAGATGTGCAAGTCCTCTTGAGGCTGAACTATCAGCGTGCATGGAGGGAGTTACCCTGGCTCTCGAGTGGAGCATGGCG
CCTCTCGTCCTGGAGATGGACTGTGCTGCTGCAGTAAGCATGATTAAGGAAACATCATTGGACAGATCCCCCAATGCGTC
TCTTGTTGGAGAGATTAAGAGGAAGCTAGCTGTAGGGAGGGAGCATGCGATCAGGTTGATTCCTAGAGAGCAAAACGGTA
CCAGTCATGCCCTTTCGCAAATGGGATGCTCGATTCCACGTACGGCCGTCTGGCTGCGTTCGGCACCTGACGAGATCGTT
GGTTTATGTAAGCAAGACTGTGGCGAATCCACTTGAGTAATGAAATGATCCTTTCGCAAAAAAAAAA-------------
--------------------------------------------------------------------------------
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-----------------
>chr6B_1
GAAAGGCCTTCTATGGCGCGTGGGCAATGGAGAGAGGATCCGCATTTAGCGTGACCCATGGATTCCAAGGCCGACGTCGT
ATCGGCCAATCACAGTGCGTGGCACATGTCGTCTGCGACGTGTGGCTGACCTTCTGGATGACCATGGCCGATGGAAGGTG
GAGCTGCTTCACCAATACTTCCAGGCTCCTGATGTGGAGTACATCCTTGCGATCAAGGCAAGCCCACGAGGACTGGATGA
CGTCCTCTCCTGGGCGCCGGACGGCCGCGGCATCTTCAGCGTGAGAAGCGCGTACAAGCTTGCTCGAGAGGAGCAAACCA
GCACCACCGCGTGCGCCACGAGCAGGGCACCGGATGGCACTCGTGCCGTCTGGAAGACAGTGTGGGGGTGCCC-TGCTCC
CCCCAAGGTACGTGTATTTGCATGGCGTGTTGCGACAAACTCTTTGGCTACCCTAGAAAACAAGAAGAAGAGAAAGCTCG
AGATTTCTGATATTTGTTCTTTGTGCGGAATGGAATGAGAGGATACATTCCATGCTCTTTGCAGATGTCCCATGGCGCGG
ACACTATGGACGGCAATGGCAAA---------------------------------------------------------
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-----------------
>chr6A_5
----GGGCTTGTGTGGCGAGTGGGCAACGGTGCGAGTATCCGCATATGGCGGGACCCCTGGATCCCGCGGCCCACGTCTT
ATAGGCCAATCACGGCGCGTGGCACATGCCGGCTCCGGCGAGTGTCAGAACTCCTTGACGACAACGGCCGATGGCGGGTA
GGTCTCCTTCAACAATTCTTCACCATCCCGGATGTGGAATGCATCTTGTCGATCAAAACCAGCCCGCAAGGACTGGATGA
CGTCCTAGCTTGGGCCCCTGACACCCGCGGCATCTTCACTATACGCAGCGTGTACAACCTTGCCCTGGAAGGGCGAACCA
GCACCACCGTGTGCTCCACGAGGAGGGCACCGGACGACACTCGTGCCGTCTGGAAGGCAGTGTGGGGGTGCCC-TGCTCC
CCCGAAGGTACGAGTATTTGCATGGCGTGTTGCAACGAACTCGCTGGCCACTCTTGAAAATAAGCTTAAGCGAAAGCTCG
AGGTCTCTAATATTTGTGTTTTTTGTGGAATGGAGCGGGAGGACACATTCCATGCCTTATGCAGGTGTCCCTTGGCGCGG
CGATTATGGATGGCGATGGCGAGCACATGGAGCATGCCAAAGGTGGATTCCATCGCCAACATAGGCCCAGAATGGATTAT
TCATCTGCTGGATGGGTGTAGCGATGTTGAACGCTTACCAATTATAATGACCCTATGGCGGAACTGGTAAGTTAGAAATG
AAGTCTATCATGAGAAGTCGGCGCCTCCCGTTGATGCATC----------------------------------------
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-----------------
>chr6A_5
----GGGCTTGTGTGGCGAGTGGGCAACGGTGCGAGTATCCGCATATGGCGGGACCCCTGGATCCCGCGGCCCACGTCTT
ATAGGCCAATCACGGCGCGTGGCACATGCCGGCTCCGGCGAGTGTCAGAACTCCTTGACGACAACGGCCGATGGCGGGTA
GGTCTCCTTCAACAATTCTTCACCATCCCGGATGTGGAATGCATCTTGTCGATCAAAACCAGCCCGCAAGGACTGGATGA
CGTCCTAGCTTGGGCCCCTAACACCCGCGGCATCTTCACTATACGCAGCGTGTACAACCTTGCCCTGGAAGGGCGAACCA
GCACCACCGTGTGCTCCACGAGGAGGGCACCGGACGACACTCGTGCCGTCTGGAAGGCAGTGTGGGGGTGCCC-TGCTCC
CCCGAAGGTACGAGTATTTGCATGGCGTGTTGCAACGAACTCGCTGGCCACTCTTGAAAATAAGCTTAAGCGAAAGCTCG
AGGTCTCTAATATTTGTGTTTTTTGTGGAATGGAGCGGGAGGACACATTCCATGCCTTATGCAGGTGTCCCTTGGCGCGG
CGATTATGGATGGCGATGGCGAGCACATGGAGCATGCCAAAGGTGGATTCCATCGCCAACATAGGCCCAGAATGGATTAT
TCATCTGCTGGATGGGTGTAGCGATGTTGAACGCTTACCAATTATAATGACCCTATGGCGGAACTGGTAAGTTAGAAATG
AAGTCTATCATGAGAAGTCGGCGCC-------------------------------------------------------
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-----------------
>chr4A_5
----GGGCTCCTTTGGCGGGTGGGCAATGGCGAGCACATCCGCATATGGCGTGACCCGTGGATCCCGCGGCCTACCTCCT
ACCGGCCTATCACGCAGCGAGGGACTTGCCGACTCCGGCGTGTGTCTGAGCTGCTTGATGAGAATGGCCGGTGGCGGGTG
GACCTCCTCCAGCAACACTTCATCGCCCCTGACGTGGACTACATCTTGACGATCAAAACGAGCCCACGACGGCTACCGGA
CGTCCTCTCCTGGGCTCCGGACATACGTGGCATCTTCAGCGTCCGGAGCGCGTACAAGACCGCTCTAGACGAGCGAACCA
GCACCACTGCGTGCGCCATGAGCAGGGCACCGGACGGCACTCGTGCCGTCTGGAAGGCAGTGTGGGGGTGCCC-TGCTCC
CCCTAAGGTACGAGTTTTTGCATGGAGAGTTGCGACGAATTCTTTGGCCACACTTGAAAATAAATGCAAACGGACACTTG
AGATTTCTAACACATGTGCTTTATGTGGCTTGGAATGCGAGGATACATAGCATGCCCTCTGCAGATGCCCACTGGCCAGG
CATCTTTGGACGGAGATGGCGCGAATCTGGAGCATGCCCAAGGTAGAGACCAA--TCAACACCGGACCGGAGTGGATCCT
CCACCTGCTGGACCGTTGTACTGATGAGGAGAGGCTTCCTATGATCATGACGCTTTGGCGTAACTGGTACGTGCGGAATG
A-------------------------------------------------------------------------------
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-----------------
>chr5D_191
--------------------------------------------------------------------------------
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------------------------------GACATGGAATGCATCTTGGCGATCAAGGCTAGCCCACGAAGGATGGAGGA
TGTCCTATCATGGGCGCCGGACACGCGGGGCAAGTTCAGTGTCCGCAGCGCATACAAGACCGCTCTCGAGGAGCGGACTA
GCACCACCGCGTGCGCCACGAGCAGGGCACCGGACGGCACTCGTGCCGTCTGGAAGGCAGTGTGGGGGTGCCC-TGCTCC
CCCTAAGGTACGAGTTTTCGCATGGAGAGTCGCGACGAACTCTCTGGCAACGCTTGAAAATAAACATAAACGTACACTGG
AGGTGTCTAATATATGTGCTTTATGTGGTTTGGAATGCGAGGATACATACCACGCTCTATGCCGTTGTCCGTTGGCCCGA
CAGCTATGGACGGCGATGGCGCGTACATGGAGTATGGCCAAGCTGGAGACCGTCGTCAACACTGGGCCGGAGTGGATCAT
CCACCTGCTGGACCAATGCAAGAACGAGGAGAGACTACCTGTGGTGATGACACTTTGGCGGAGCTGGTATGTACGTAATG
AAGTATACCA----------------------------------------------------------------------
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-----------------
>chr1D_191
--------------------------------------------------------------------------------
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------------------------------GACATGGAATGCATCTTGGCGATCAAGGCTAGCCCACGAAGGATGGAGGA
TGTCCTATCATGGGCGCCGGACACGCGGGGCAAGTTCAGTGTCCGCAGCGCATACAAGACCGCTCTCGAGGAGCGGACCA
GCACCACCGCGTGCGCCACGAGCAGGGCACCGGACGGCACTCGTGCCGTCTGGAAGGCAGTGTGGGGGTGCCC-TGCTCC
CCCTAAGGTACGAGTTTTCGCATGGAGAGTCGCGACGAACTCTCTGGCAACGCTTGAAAATAAACATAAACGTACACTGG
AGGTGTCTAATATATGTGCTTTATGTGGTTTGGAATGCGAGGACACATACCACGCTCTATGCCGTTGTCCGTTGGCCCGA
CAGCTATGGACGGCGATGGCGCGTACATGGAGTATGCCCAAGCTGGAGACCGTCGTCAACACTGGGCCGGAGTGGATCAT
CCACCTGCTGGACCAATGCAAGAACGAGGAGAGACTACCTGTGGTGATGACACTTTGGCGGAGCTGGTATGTACGTAATG
AAGTATACCACCACAATCCTGCACCACC----------------------------------------------------
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-----------------
>chr7D_191
--------------------------------------------------------------------------------
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------------------------------GACATGGAATGCATCTTGGCGATCAAGGCTAGCCCACGAAGGATGGAGGA
TGTCCTATCATGGGCGCCGGACACGCGGGGCAAGTTCAGTGTCCGCAGCGCATACAAGACCGCTCTCGAGGAGCGGACCA
GCACCACCGCGTGCGCCACGAGCAGGGCACCGGACGGCACTCGTGCCGTCTGGAAGGCTGTGTGGGGGTGCCC-TGCTCC
CCCTAAGGTACGAGTTTTCGCATGGAGAGTTGCGACGAACTCTCTGGCAACGCTTGAAAATAAACATAAACGTACACTGG
AGGTGTCTAATATATGTGCTTTATGTGGTTTGGAATGCGAGGACACATACCACGCTCTATGCCGTTGTCCGTTGGCCCGA
CAGCTATGGACGGCGATGGCGCGTACATGGAGTATGCCCAAGCTGGAGACCGTCGTCGACACTGGGCCGGAGTGGATCAT
CCACCTGCTGGACCAATGCAAGAACGAGGAGAGACTACCTGTGGTGATGACACTTTGGCGGAGCTGGTATGTACGTAATG
AAGTATACCACCACAAACCTGCACCACC----------------------------------------------------
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-----------------
>chr5D_210
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CGATCAAAGCCAGCCCACGGCGGCTGGACGA
CGTCCTAGCATGGGCTCCAGACTCGCGAGGTATATTCAGCGTACGAAGCGCCTACAAGACCGCTCTAGAGGAGCGGACCA
GCACCACCACGTGCGCCACTAGCAGGGCACCGGACGGCACTCGTGCCGTCTGGAAGGCAGTGTGGGGGTGCCCCTGCTCC
CCCGAAGGTACGAGTCTTTGCATGGAGGGTTGCGACAAATTCTTTGGCTACACTTGACAATAAATGTAAACGTAAACTTG
AGGTCTCTGACACGTGTGCTTTATGTGGGTTGGAACGCTAGGACTCTTTCCACGCCCTGTGCAGCTGTCCACGGGCGAGG
TGTCTGTGGAGGGCGATGGCACAAACATGGAGCATACCCATGCTAGAAGCCATCACCAACACAGGTCCCGAATGGATCAT
TCATCTGCTCGATGGTTGCAGCCCTGAAGAACGCCTTTCTGTGATCATGACTTTATGGCGGAACTGGCATGTGAGGAATG
AGATATACCACCACAAACCGGCGCCGCCGGTAGAAGCTTCTACCAAATTCTTAGGTGGCTACATCGAAACTCTTCT----
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-----------------
>chr3B_1444
--------------------------------------------------------------------------------
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--------------------------------------------------------------------TAATCAGCCACC
ACATCACGAGAATTAGACCCAAAAAAATAAAGGGTCCAGAAAAATTCGACATCTTTCCCAAAAAAGAGCAATACCATGCG
GATAATTCAAGGAAAGTTTGAAACTTTTTGCGG-AATAGAATAAAAAATACATATTCGGGACCATTTT-TTGTCAGAA--
---TGACCGAAAACAATTAAATTTTCCAGAATAGTTTGAAAAAAATCCTT----------TGTCATGCTAATCATTTTGT
GAAAATTTGAATTT-TTTCGCAAAACTAATAAAAATACATATTGAGGACCATTTTTGTTCAAAATTTGACAACAAAATAA
ACTGTCCATACAAAATTGAAAATATTCTAAAACTGAACACTGTCATGCTAAATATTCTGAGAAAGTTTGAAATTTCTTTG
CCAAACAGAATTAGAAATACAACTAAAATCAAGAAAAGATGGAGAGGATATGTATTTTCCTAGTATTTGTTAATCTATTT
GGCAAAAGAAAATCA-AACTTACCCAAAATGATCAGCGTGGCAAGGCTCATTTTGGGAATGTTTTCAATTTTTTCTAGAC
AATTTTATATTTTGGACAATTTTTGACCAAAAATGGTCTGGGATATGCATTTTCGTTGTGTTTTTATTTTGTTTGGCGAA
AACTTTCGAACTTCGCCACAATGATCAGCATGGCAGGTTTAATTTTTTAGACCGTTTTCAGTTTTTTTGGACAATTGCAT
TTTTTTTGTTTGACCAAAAATGATCCTAAATATGTATTTTTGTTTT-------------TTTCGCAAAAAAATAATGTCC
ACATGGTGGGGCTCATTTTTTTTAGGGTTTTCAATTTGTTCTGGACACTTTCATTTTTTGGGTCAAATATTAATGATATG
GCGGCTTACTAGGCGGTCAAGTCTTCAATACATGTCAAAACCTACCAGAAAATTGGAGTTCTGAGTTTAGAGTTGTAATA
TAAATGGTATTGGAGTT
>chr3D_1444
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--------------------------------------------------------------------TAATCAGCCACC
ACATCACCAGAATTAGACAAAAAAAAAGAAAGGGTCCAGAAAAATTTGAAATCTTTCCCAAAAAATAGCAATACCATGCA
GATAATTCAAGGAATGTTTGAAACATTTTTGCCAACTAGAATAAAAAATACATATTCAGGACCATTTT-TGGTAAAAAAA
AATTGACC--AAACAATTCAATTGTCCAGAATAATTTGAAAAAATCCTTAAAGTTAACACTGTCATGCTAATCATTTTGT
GAAAAAATGAAAAAATTTCACAAACGTAATAAAAATACATATTGAGGACCATTTTTGGTCAAAATTTGACAAAGAAATAA
ACTGTCCATACAAAATTGAAAATATTCTAAAACTGAACA-TGTCATGCTAATTATTCTGAGAAAGTTTGAAACTTCTTTG
CCAAACAGAATTAGAAATACAACGAAAATCAAGCAAAGATGGAGAGGATATGTATTTTCCTAGTATTTGTTAATATATTT
GGCAAAAAAAAATCAAAACTTTGCCAAAATGATCAGCATGGCAAGGCTCATTTTGGGAATGTTTTCAATCTTTTCTAGAC
AATTTAATTTTTTGACAATTTTTTTACCAAAAATGGTTTGGAATATGCATTTTCATTGTGTTTTTATTTTGTTTGGCAAA
GGGATTCAAACTTTCCCACAATGATCCGCATGGCAGTTTTATTTTTTTAGCCCATTTTTCA-TTTTTTGGACAATTTCCT
TTTTTTGATTTGACCAAAAATTGTCCTAAATATGTATTTTTGTTGTATATTTTGTTTTGTTTCACAAAACGAAAATGTCC
GCATGGTGGGGCTCC--TTTTTTTGGTTTTTCAATTTGTTCTGGACACTTTCATTTTTTGGGTCAAATATTAATGATATG
GCGGCTTACTAGGCTGTCAAGTCTTCAATACATGTCAAAACCTTCCAGAAAGTTGG------------------------
-----------------
>SNPs
----------S---------------------------------------------------------------------
-------------S-----------------------------------------------------------------S
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----------S----------------S----------------------------------------------------
--------------------S-----------------------------------------------------------
--------S-----------------------------------------------------------------------
---------------S----------------------------------------------------------------
-------------S----------------------------S-------------------------------------
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----------------------------------------------SS-------S------------------------
-----------------S---------------S----------------------------------------------
-------------------S-------------S----------------------------------------------
-----------------------------S-------S------------------------------------------
---------S----------------------------------------------------------------------
------------------------------------S-----------S-------------------------------
----------------------------------S-----------------------------------------S---
-------------------------------------------------------------------S------------
----------------S-------S-S-----------------------------------------------------
-----------------------------------------------S--------------------S-----------
---------------------------------S-------------------------------S--------------
----------SS------------------------------S---------S--------------S--S---------
----------------------------------S---------------------------------------------
-----S---------------------------------------------S--------S-------------------
----------SSSS-------------------------------------------------------------S----
----------------------------------------------------------------------S-------S-
------S---S--------------------------------S-----S--S------------------------S--
--------------------------------------------S-------S---------S-----------------
--------------------------------------------------------------------------------
-------------------------------------------S-----------------S------------------
-----S-----------
>forward_2434
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---------------CCTGAGCAGTGGAGCAAGG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>reverse_3611
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TTTCGCCACAATGATCAGCA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
