>input_sequence_81136
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----------------------------------------A--------TGGTTGTGT------GTGATCATACTGGGAA
ACTTATTCGAGCTCAAGCACGGTGGTATGAATATGCTAGTTCTGCCCGGATGATGGAGGCAATGGCAAT-----ATTGGA
TGCTGTGAATCTGGCTTCAGATATGGGATGGAGGGGAATCTTGGTTGAAAGTGACGCCCTTGAAGTGGTGAACCTGTGGA
AATCTCAGGATTTTGCAAAAGCTGATATAGTGAGGCCTCTTCAGGAGATCAAGGAGCCAGGCGGGAACTTCATTAGTTTT
TCTATTTCTTTTGTAAGAAGAGAAACCAATATGGCTGCTCATCTTACTGCTAAACACGCTAGTGAGGTTCGCAGGAGGTG
TCTCTGTATCAATATTGTTCCACAATTCCTCCGTGATGTTATTGGCCGTGAATGTATTACCACTGAGTAA----------
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>chr2D_1_TraesCS2D01G219000
CGGGAAAGACTTTATGAATGCCACGAAACCAAAAGGATCATCTCACAATTGGCGAGCCGTATTATTTGGCAGGGAAGCTC
TAAAACTCGGTTTGATCAAGAGGATGGGAGAAGGGGACTCGATCAATGTTTGGGAGATCCATGGATTCCAGACAACTTCG
GGTACAAAGCTATAGTTAAACCCACGCATGCAATGATCACACAAGCAAATGAGCTCCTCAAGGAGGATAATCGTAGCTGG
GATGTTTAGGCTGTCAAGATGAACTTTGTTCAGATTGATGCTGAAGCTATTTTACGCATCCCAATTAACACTGGAGAGGA
TTTCTGGGCATGGCAACCGGATAAGCGTGGGCAATTTTCTGTACGTTCAGCATACAAACTCCTGATTGAACACCATGGCA
GATCAGGTGGTGCTTCTAGCTTGTCGAATGGACTTGGCCTGTATGGAAAATCTTATGAGGTTGGAGGTGCCACCAAAGGT
TAGATGCTTCTGTTGACGAGTGATCAAGGGGTTTATACCTTGTCGGGCTGTCCTTAGAGATCGCCATGTCGAACACATAC
CTTTCTGCGAGGACTGTGGAGACGATGAGACCATGCAAACATGCTCTGTTCGGATGTACTTGGGCTCAGCAGTTCTGGGA
CCACGTCAAGGGGAGGACTGGAGTTAAACTTCCTATGCTCCACCCTAACACTTGGGCACTACAGTAGATATTATTCAGGG
GAACTTAATCAGCAGAAGGGAAGCTTGTATCATCTTGTGTGGCGCCTGGGTAGTCTAATCCGAACGAAATGCTCGGCATC
ATGCTGAACAGGTCCGAACAGTTGATCAATCAATCTGTTGGACCATTGATATAGCTGCAGATTTATCCTTGCTTGGAAAA
GAACAGGCGGCTCCTACACTGCGTGTGCTAGAATGCTGGAAACCACTGCCACATGAGTGTCTCAAAATCAATACTGGGCA
TGCCCAGTTCCAGGAACTACTCGGGCAAGGGAGTACTGGCA--------TGGTTGTGT------GTGATCATACTGGGAA
ACTTATTCGAGCTCAAGCACGGTGGTATGAATATGCTAGTTCTGCCCGGATGATGGAGGCAATGGCAAT-----ATTGGA
TGCTGTGAATCTGGCTTCAGATATGGGATGGAGGGGAATCTTGGTTGAAAGTGACGCCCTTGAAGTGGTGAACCTGTGGA
AATCTCAGGATTTTGCAAAAGCTGATATAGTGAGGCCTCTTCAGGAGATCAAGGAGCCAGGCGGGAACTTCATTAGTTTT
TCTATTTCTTTTGTAAGAAGAGAAACCAATATGGCTGCTCATCTTACTGCTAAACACGCTAGTGAGGTTCGCAGGAGGTG
TCTCTGTATCAATATTGTTCCACAATTCCTCCGTGATGTTATTGGCCGTGAATGTATTACCACTGAGTAATTAATAAAGC
TCCAAATTATAAAATAAAAATAAAAAAACCTCAGCAGGCAGCGTCGTCTTGAGGACTGAGGCTGTCAAGCTCGCATTGGT
GCTGCTCATTGCACGAGGGAAGAGGCAAGCCAAAGGCCAGAAATATAGGCTGTGGTTCAGCAACTCAGTAAGCTGAATCT
GAGAGTCTGAACCGAGTTGATATGGAGGTGTCCTTCCGGAACTTCATTGCCATGAGGTCTTTTGTGATAGTAAGCTGGAG
GAGGTTACTGATCCAGTTACTAATGGAACATGTCCATATTAATTAATTAGTCACTTTACCAGTGATCTCATCATTTCATG
GTTAATGTATCGGTTTCTTGACCTCTGTGATGCTGAAAGCTTGTGTATGAGATCAGGTGAACGGTTGGTTCTCTAGGTTA
GTGTCATGAATGTAGAATTTGTAAGACATTAGATGCAGCAGTTGAGCATTTGTAATGTAACTTTGAAAGCTTTGTAGTGC
TAATCTCAATTAACGGCTTGCACTAGGAAATATCAAGGACAACCCTATCCGTATGTTGTAGAACCATAGAAACAATAGAA
CTACCTAGTTGATATCAACAGTGAAATCTCGCTGATTTGGTAAACTGTATACAGTATTCTTTTTGGAGTTAAAACTGAGT
AAATAAAAGAAGAAAAAGCAAGTTGGTAGCAACAGGAGTACTACTGAAGTGGTGATCTGGACTGTACTGAAGCACATTAG
TCATCAACTTTAAAAAATTGAATCTTAGCATAATCTCTGGAGAATACTAGAGTTATTGCATCCCAATTCGGGAGCTTTTA
CAAGGACACCAACAAATCAACAACGAACTGTAAAAGGAATGGAAGTATTTCAAGTAATTCCAATTCAGGAGCCTTTACAA
CACCGCACCGTTCGGCATACAACAATAGATCGGCTCTAGCCCAGCCATGCACCTAGCGATTACTCCTCGTTATCGCCTAC
AAGCAACGGCGGCTGATCGCCCATGACCGA
>chr1A_582
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---------------------ACGACGAGACCGCAT-ATCACGCCCTATTCAGATACATTTGCGCTCAGCAATTTCAAGA
CCAGGTCAAGGAAAGGACTGGAGTTAGAATCCCTATGCTCCACCCTGATACTTGGTCAATCGAC-----ATTATTCAGGG
AAACTTGATCAGTAGAAGGGAAGCTTGCATCATTTTGTGTGGCGCTTAGGCAGTCTGGTCCGAAAGAAACACGCAGCGTC
ATGATGAACATGTCTGAATAATTAATCAATCAGTTCGATGGACCATTGATATAGCTGCAGATCTTTCCCAGTTGGGCAAA
GAGCATGTGGCTCCTACACGGCGTGTTCCAGAGTGTTGGAAAGTACCACCAATTGAGTTCCTCAAAATCAATATAG---A
TGCCTAGTTCCATGAGTTACTCGGGCAAGGGGACACTGGACGTCTGGAGTGGTTGTGTGCGCGCGTGATCATACTGGGAA
ACTTATTCGAGCCCAAGCACAATGGTATGAACATGTTAGTTCTGCCTGGATGATGGAAGCAATGGTGATATTGCATTGGA
TGTTGTGAATCTGGCCTCGGATTTGGGATGGAGGCGAATACTGGTTGAAAGTGATGCACTTGAAGTAGTGA-CCCGTGGA
AAACTCAGGATCTTGGAAGAGTTGATATAGCAAAGCCTCTTCAGGAGATTAAGGAGCTATGTGGGACCTTTATTAGCTTT
TCTATTTCTTTTGTAAGAAGAGAAGCAAATATGGCTGCTCATCTCAGTGCTAAGCAGGCTAGTGAGGTACATAAAAGGTG
TCACTGGATCAATTTTGTTCTAGAATTCCTTCGTGATGTTATTGCCCGTGAATGTATTACCCATGAGTAATCAATAAAGC
TCCGAATTCCAAAAAAA---------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS----S------SSSSS-S--S--S--S---S---SS-S---S--------S--SSSS--
---S-------SS-------------S-S-S---------------S-S------S--S-SS-SSSSSS-----------
S-----S-----S--------------S-----S-----------S-S--S-----SS------S----SS-S-S--S--
---S------S---S---S-S--S--------S-SS-S------------------------S-S---SS-S-S--S---
--S--S-S-----------S------S-S---S--S------SS--SS---SS-----SS-------------SS-SSS-
----S-------S--SS--------------SSS-----SS---------------------------------------
------------S-------SS---------S---S----------S----------S-------SS-------------
--S------------S--S---S-----------S----SS-------------S--S--------S----S--S-----
--S--------S---S--S--S--------SS-S---------------S-------S-S-S----S---S-----S---
------------------------S-S-----------------S-S------S--S-----------S-SS-SS-----
--S---S------S------S-S-------S-------------S----------------SS--------S--------
---S----SS----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_118
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------------------AGAGGATGGGAGAAGGGGAC------------------------------------------
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>reverse_1349
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--------------------------------------------------------------------TCGCAGGAGGTG
TCTCTGTA------------------------------------------------------------------------
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>forward_544
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--------------------------------------------GGGCTGTCCTTAGAGATCGC----------------
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>reverse_1502
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-------------------------------------------------------------CTGTCAAGCTCGCATTGGT
G-------------------------------------------------------------------------------
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