>input_sequence_81092
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--------------------------------------------------------ATACCCCACGCA------------
--CACAATAGACCTCCCACATATATCTGAAGTAGTAATAAGTAGTAAGACGCAGATGACCTCTCAGAAGACATCATGGCC
GGAGTTGGTGTACATGCCGGCGACGCCGGCAGTGATGACCATCAACAGCGAGAGACCTGACTTGACGACGGAGGTGCTCC
AGATTGGGATCAGCCCAAGCCCGCCGGAGTTCGACTCGACACGTGTCTGCGTCTTCCTCGACCCACGAGACAAGCTTGGC
CTTGTTGCAGCCGTCCCCGTCGTTGGCTAGATCCAACGGAGCGTTTCTCTTAAGCAATACATAGCAGAGTTGAAACAAAC
GGGGCCGGTTGGCGATATGCCCCGGCAGGGATCATATATGTAGCTCATCGTGTCGTTCTTACATTATGGTTTTTCTAATA
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>chr1D_1_TraesCS1D01G022200
CGACGCGCTTAATGTCTCCATGGCGAGCCTTTTTTTGGCCATAGCCAAGTATGCTGGGTACTCGGCTTCGGGCTGGGATT
CCTGTAGTGCAAGGTGCTCATTAA-TTT--TTTGTTAGGTAAACAGTAGGAAATAACATGTACCGTAATTCTTATAAAAA
CATAGTGAACAAGCTGTAAGAAAAAAAAAACTAAAAGGCAGACAACAAATATTTAGCATTATGCTCATGTCCTTACTTTG
TAATAATAGT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TATGCAGCCAGCTTCTTGAAGTTTGTGAGTCTATTTCCGGCATTGGCAGATGGTTCTGGATTTTG
CTCTATATAATATTTGGAAAATATTTGTTATGTTTTGATT-TGAGAAAAAATGT-TTCTAGTGATCATTTACCCTG--TT
GTGTAAAGTTATTGTATTGTTAGAAATATAGAGAAAAATGT---TAAGGGTATTGTGCACCAGGGGCCGGGAAAGGGCAG
AATAGGAAGGAAAAATGAGTTGGTCCGGGCTTTGTATTATAC-ATTAGCTAATAAAGAAATGGGAACAAATCTTTCATTG
TTGAATGGACAAATTAATATGTGGCGCAATGCGTTTCGGCTGTAGGGTGTACGGTTTAAACGGGATGTAGCTTGGTTTGC
ATGTTCTGCA-ATGTAACTCATGAGGCAAGTTTCCCAATACTAGCATT---------------AGGAAAACAGTCCAATC
TTGCTCAGTAGTTGAATTTGCCAACTTCCCCTCAAAGAAAAAATCCGAATGCCCATCAGCCCCTTAATGTGCCTTAGCCA
TCT-TTTCTTATTCACAAAATGATCTCTCTTTTGGCATAAGATTCTCCCGAATAACATAGTGATTCATGCCTAGGGTGAA
CAGCCCGGCTGTTTTGTGAGCAAACGATCTATCCAGAAGTGCAGTGATAACATCGAAGCATCACTTGGTCCTACCGGCCG
GCTTTGTATACATGCTAA------------------------------AATCAGC-------------------------
--------ATGACACCAAGCCTATAAATCCTTGCGATATCAGAGAGCTTTGCAGCCATACCCCACGCA------------
--CACAATAGACCTCCCACATATATCTGAAGTAGTAATAAGTAGTAAGACGCAGATGACCTCTCAGAAGACATCATGGCC
GGAGTTGGTGTACATGCCGGCGACGCCGGCAGTGATGACCATCAACAGCGAGAGACCTGACTTGACGACGGAGGTGCTCC
AGATTGGGATCAGCCCAAGCCCGCCGGAGTTCGACTCGACACGTGTCTGCGTCTTCCTCGACCCACGAGACAAGCTTGGC
CTTGTTGCAGCCGTCCCCGTCGTTGGCTAGATCCAACGGAGCGTTTCTCTTAAGCAATACATAGCAGAGTTGAAACAAAC
GGGGCCGGTTGGCGATATGCCCCGGCAGGGATCATATATGTAGCTCATCGTGTCGTTCTTACATTATGGTTTTTCTAATA
AATGGTCCGCTAAATAAGTGGTAGGGCAAGTATTAGCGGAAGAGAATTTCCGTGTGACCTTTGAACGATAGTTCCTCCCC
AACAGTGCTCCTGTGTGCACTCTCGCTTTTGGCGCTGCCACGTAAATATAGTGCAGGCGTCGGCCGCACGTTCGCCGTGT
GTATGTCCGCGCTTCTGAGTCAAAACCAGCCGACTCAGTTGCTGGGTGAAGAATGTTGCATAGCCTACGTGAAAATCAAA
GAGGAGAGCTCAGCCTATAAATCCATTGCAATACGAGAGACGTGTGCAACCACACCGCAAGGTATATCTGCAGCAGTAGT
AGGAACACACAAGATGAGCTCT-GGAAGACGTCTTTGCCGGAGTTGGTGGGCATGCCGGCGACGCTGGCGGTGATGACCA
TCAACAGCCAGAAGCCAGACTTGATGGCCGAGGTGCTCCAGATTGGGATCAGTCCAAGCCCGCCCAGCTTCGACTCGACA
CGTGTCTGTGTGTTCCTCGACCAACGAGACAAGCTTAGCCTTGTTGCAGCCGTCCCTGTCGTTGGCTAGCTACATAGCTG
TGTTTTTCTAAGGAAGCTACATGGTAGAGTTTATCTAT--AACCTCCTTAGAGACGGGGTGGTTAACGAT----ATGCCC
TGCTGGCGATC---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATATATGTAGCTGTATGTGTCGTTTTCTGTGC
TTATGGTTTTTGGAATAAATGGTTTCACAGAATAAGTTGTAGGGTCCAGCATACAATTCATTT-----------------
----------------------------------AGGAAATTGCATGTTCTCAATAGTTTTGTTGATTGATAATGGTGTT
TTATTTCATCATAAATATATGTGAGACATATCTTTTCCATTACCCCATGG----GAATGATCATCATACGAAAGCATTTC
CTCAATAAAAATAACAA------------------ATCCTATGGAGCACACATATGGTATAGAGCACCTTACAGGCGCTA
CAGAGCGCTCGCCATCTGATCCGGA-TGTTGCTGAGTGTACTCATTGTAATATATTACGGTGAGATGTGGTTTGATGGAA
-------------------------------------------------
>chr1B_1
CGAAGCGCTTAATGTATCCGTTAAAGG-CTTTTTTGGGCCTTAGCAATGTATGTCGGGTACTTAGCTTCGA-CTGCGATT
CTTGTAGTGCAAGGAGCCATTAATTTTT--TTTGTGAAGTAAACAGTAGGAAATATTGCATACTGCAAT--TTGTACAAA
CAAACTTAACAAACTGTAAGAAAAGAAA--CTAAAAGGTGGACAACAAATATTTAGCATTGTGCTCATGTCCTAGCTATG
CAATAATAGT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TATGCAGCCAACATCTAAAAGTTTGTGTGTATAATTCCAGCATTGACAGATGGTTCTGGATTTTG
CTCTATATACTAT-TAGAAAATAATGGTTATGTTCTG-ATATGTGAAAAATCATGTTTTAGTGATCATTTACCTTT-TTT
CT-TAAAGTTATTGTATTGTCAGAAATTTCAAGGAAAATGTTAATAAGGGTATTGTACACCAGGGACCGGGAAAGGGCAG
A-TAGGAAGGAAAAAATGAGTAGGTT--------TATCGTACTGTTATCTAATAAAGAAATGGGAAGAACACTTCAATTG
TTGAATGGACAAATTAATATGTGGCCCAATGCGTTCTGGCTGTAGGGTGTACGGTTTAAACCGGATGTAGTTTAGTTTGC
ATGTTCTGCA-ATGTAACTCACAAGGCAAGTTTCTCAATCCTATCGTTAGAAAGACATCTAGGAGTAAAACAATCCAACT
TTGCTCAGTAGCTGAATTTACCAACTTCCCCTCAATGACCAAAGCTAAATACCAACTGGG-CCCTAATTTGCCTTAACCA
TCT-TTTTTTATTCTCGAAATGATCTATTTTTTGGCATAAGATTCTCCAGAATAACATAGTGATTCATGCCTAGGGTGAA
CAGCCCGGCTGTTTTGTGAAGAAACGATCTATCAAGAAGTGCAGTGATAAAATCGAAGCATCACCCGATCCTGCCGGCC-
------------TGCTAA------------------------------ATTAAGC-------------------------
--------ATGACACCAAGCATTTAAATCCTTGAGACATCCGAGAGCTTTGCAGCCACACCCCACGCA------------
--CGCAA-AGACCTCACACATATATCTGAAGTAGTAATAAGTAGTAAGACACAGATGACCTCTCAGAAGACATCATGGCC
GGAGTTGGTGTACATGCTGGCGACGCCAGCAGTCATGACCATCAATAGCGAGAGACCGGACTTGACGACGGAGGTACTCC
AGATTGGTACCAGCCCAAGCCCACCGGAGTTCGACTCGACACGTGTTTGCATCTTCCTCGACCCACGAGACAAGCTTGGC
CTTGTTGCAGCCGTCCCCGTCGTTGGCTAGCTCCA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TAGCAG
AGTTTCTTTTATGGAG-TACATAGCAGAGTTC---TACTATA-TCCCGTAGAAACAGGCCTGTTGGCCATATG----CCC
CGGTGGGGTTC---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATATATGTAGCTCATCGTCTCGTTTTTACA--
TTATGGCTTTTCTAATAAATTGTCTACAGAATGAGTGG-TAGGGTCAGGTAT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr1B_8
-------CTTAACGTCTCCATGCCAAGCC-TTTTTTGGCATTAGGCGAGTATGCTGGGTACTCGGCTTCGGGCTGTTATT
CCTTTAGTTCAAGATGCTCATTAGTTTTATTTTGTGAGGTAAATAGTAGGAAATAATACATACTGCAAT--TCTTAAAAA
ATAAGTTAATAGACTGTAAGAAATGAAAT--TAAAAGGTGGACAACAAATATTTAGCATCATGCTCATGTC-TTGCTATG
AAATAATACAGTACATAGTTTGCCGAGTACGTGGTTTTAGAGTCTCAGCAAATGCAGACTGGACGTCACGAAGCCGTCAA
CTGTAGATGGCCTTGCCACGTGGCTCGTCTTTACCGGGTGCCACATCCGCGATCTCGGCATACTCTCTATAAGCCGAGTT
CCTTCGTCTAAGCCGAGCGTCACCTTGAGGGGCTCGGTAAATTCTCCCATATGCCGTGGCCCCTAGTGTGTGCTGAGACG
CGTACTCGGCTTAGATGCCTTTTGCCGTGATCCCGTGTTCTCGTACTCGGCAAAGACAAAAGAGCTCTGTAACAGCGATA
TTTCCAGTAGTGAGCTATGCATCCAACATCTTAAAGTTTGTGTGTATATTTCCGGCATTGGCGGATTGTTTTAGATTTTG
CTCTGTATAATATCAGGAAAATATAGGTCATGCTCTG-TT-TGAGAAAAATCGT-TTCTAGCTATCATTTACCTTT-TTT
GCGTAAATTTAATCTATTTTTAGAAATATCATGGAAAAGGT---AAAGGGTATTGTGCAATAGGGAACTGGAAAGGGCAG
AATAGGAAGGAAAAATGAGTTTGTGTGA-CTTTGTATTATAC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>chr1B_251
--------------------------------------------------------------------------------
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------------------GCAGCCAACATCTTAAAGTTTGTGTGTATATTTTCGGCATTGGCGGATTGTTCTGGATTTTG
CTCTGTATAATTTCTGGAAAATATAGGTCATGCTCTG-TT-TGAGAAAAATCGT-TTCCAGCTATCATTGACCTTTGTTT
GCGTAAAGTTAATCTATTTTTAGAAATATCTTGGAAAAGGT---AAAGGGTATTGTGTAATAGGGAACTGGAAAGGGCAG
AATAGGAAGGAAAAATGAGTTTGTGTGA-CTTTGTATTATACTAGAGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATATAC-CCCTAATGCGCCTTAGCCA
TCT-TTTTTCATTCACAAAATGATCTATTTTTCGGCATAAGGTTCTCCCAAATAAGATAATAATTCATGCATCTACTAAA
CAGCCCGGCTATTTTGTGAGCAAACGATCTATCCAAAAATGCAGTGATAACATCGAAGCATCACCGGGTCATGCCGGCCG
GCTTTGTATGCATGCTAA------------------------------ATTAAGCTTTTTTTTTTGTTGCGGGAATGCTA
AATAATGCTTGACACCTGGTCTATAAATACTTGCGATATCAGAGACTTTTGCAGCCACACCACACCC-------------
---GAG--AGCCCTCGCACACATTTCTGAAGTAGTAAGTAGTA---ACACACAAATGAGCTCTCGGAAGACATCCTGGCC
GGAGTTGGTGGGCGAGCCGGCGACACCTGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGACGACGGAGGTGCTCC
CGATTGGGTCCAGCCCAAGCCCGCCTGGGTTCGACTCGACACGTGTCTGTGTCTTCCTCGACCCACGAGACAAGCTTGGC
CGTGTTGCAGCCGTCCCCGTCGTTGGCTAGCTC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr1B_430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------TAAGGGTATTGTACACCACGGACCGGAAAAGGGCAG
AATAGGACAGAAAATTGGGTTGGTGCAGGCTTTCTATTATACTATTAACTAATAAAGAAATGGGAAGAGCACTTACATTC
TTGAATGGACAAATTAATATTTGGCGCAATGCGTTTCAGCTGTATGGTGTACGGCTTAGAGCGTATGTAGCTGGGTTTGC
ATGTTATGCA-GTGTAACTTGG--------------------------------------AGAAGGAAAACAATCCAAAT
TTGCCCATTAGCTGAACATGCCAACTTATCGTCAAAGACAAAAGCCAAATGCCAATTAGG-CCTGAATGTGCCTTAACC-
-ATC-TTTTTATTTAAAAAGTGATCTATTTTTCGGTATAAGTGTCTCCTGAATAATATAGTAATTCATGCCTCGACTAAA
CAGCCCGGCTGATTTGTGAACAAACGATCTATCCAGAAGTGCAGTGATAACATCGAGGCATCACCCAGTCATGCCGGCCG
GCTTTGTATGCATGCTAATTAAGATTTTTTTTTTG-CGGGAATGCTAAATTAAGC-------------------------
--------TTGACACCTAGTCTATAAATCCTTGCGATATCAGAGACCTTTGCAGACACACCACACCCA------------
--CGAG--GGCCCTAGCACATATATCTGAAGTAGTAATAAGTAGTAACACACATATGAGCTCTCCGAAGACATCCTGGCC
GGAGTTGGTGGGCGAGCCGGCGACACCGGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGACGACGGAGGTGCTCC
CGATTGGGACGAGCCCAAGCCCGCCGGGATTCGACTCAACGCGTGTCTGCGTCTTCCTCGACCCACGAGACAAGCTTGGC
CGTGTTGCAGCTGTTCCAGTCGTTGGCTAG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr1B_505
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------TAG-ATTACCTAATAAAGAAATGGGAACAACTCTTTTTTTT
TATAATGGCCAAATTAATATGTGGTGGAATGCGTTTGGGCAGTCGAGAGTACAGTTTAAACCCGATGCAGCCGGGTTTCC
ATGCTCTTCATATATAACTCATAAGGAAAGTTTCTCTATCATATCATGAGAAAGAAACGAGAAGG--AAATAATCTAACT
TTGCTCACTAGCAGAATGTGCCAACTTTCTCTGAAAGACAAAAACAACATGCCAATTAAC-CAAACATGTGCATTATACA
TATATTTTTTATTCACAAAAGTATTTATTTTTTAGCATAAGGTCCTCCCGAATAATTTAATGATTCATGCCTCGAGTAAT
CAGCCTCGTTGTTTTGTGAGCAAACGATCTGTCCAGAAGTGA------AACATTGGAGCATCACCCGGTCATGCCGGCCT
TTTTTCGGTATGCATG----------------------------------------------------------------
---------------CTAGCCTATAAATCCACTGCAATAT-GAGAGACTTGCAACCACACCGCACGCATAGCCCTCATAT
ATCGAT---------------ATATCTCAAGCAATAGTAGGAACACACA---AGATGAGCTCTGGGAAGACGTCGTGGCC
AGAGTTGGTGGGCATGCCGGCGACACCAGCAGTGATGACCATCAACAGCCAGAGGCCTGACTTGACGACCGAGGTGCTCC
AGATTGGGATAAGTCCAAGCCCACCTGGGTTCGACTCGACACGAGTCTGTGTGTACCTCGACCCACGAGACAAGCTTGGC
CTTGTTGCAGCCGTCCCCGTCGTTGGCTAGATACA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TAGCAG
AGTTTTTCTGAGGAGGCTACATGGCATGGTGA---TAT--TATCCCCTTAGAAACGGGGCGGTTGGCGAT----ATAACC
TGCGGGCGATC---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATATATGTAGCTGTTTGTGTCGTCTTTTGTGC
TTATGGCTTGG----TGAATGGTTTCATATATTAAGCG-TATGGTCCAGTATACAATTTATTT-----------------
----------------------------------AGGAAACAGCATGTTCTCAATACAATTGTTGATTGATAATGGTGTT
TTATTGA---------------------TATCTTTTCCTTTACCCCTTGTTAAAGGAAAATCATCATACGAAAGCATTTC
CTCAATAAAAATAACAATGTTTTGGATCTATGAAAATCCTATGGAACACACGTACAGTATAGAGCACCTTCCTGGTGCTA
TGGAGCGCTGGCCATCTGATTCGGAGTGTTGCTGCGTGTACTGGTTGTAATATATTTCAGTGAGAATTGGTT--------
-------------------------------------------------
>chr1A_542
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TTT
TTTAATGGACGAGTTAATATATGGTGGAATGCATTTGGGCTGTCGAGGGTACAGTTCAAACCGGATGCAGCCGGGTTTGC
ATGCTCTTCATATATAACTCACAAGGCAAGTTTGTCTATCATATCGTTAGA--------AGAAGG--AAACAATCTAACT
TTGCTCATTAGCTGAATGTCCCAACTTTCGCTCAGAGACGAAAACAAAATGCCAAA------------GTGCCTTATCCA
TATATTTTTTATTCACAAAAGGATTTATTTTTTGGAG--AGGTCCTCCTGAATAATTTAATGATTCATGCCTCGAGTAAT
CAGCCTCGCTGTTTTGTGAGCAAACGATCTATCCAAAAGTGA------AACATTGGAGCATCACCCGCTCATGCCGGCCT
TTTTTCTATATGCATG----------------------------------------------------------------
---------------CTAGCCTATAAATCCATTGCAATAT-CAGAGACTTGCAACCACACCGCACGCAGAGTCCTCATAT
ATCGAT---------------ATATCTCAAGCAATAGTAGGAACACACA---AGATGAGCTCTGAAAAGACGTCGTGGCC
GGAGTTGGTGGGCGTGCCGGCGACACCAGCGGTGATGACCATCAACAGCCAGAGGCCTGACTTGACGACCGAGGTGCTCC
AGATTGGGATCAGTCCAAGCCCACCTGGGGTCGACTCGACACGAGTCTGTGTGTACCTCGACCCACGAGACAAGCTTGGC
CTTGTTGCAGCCGTCCCTGTCGTTGGCTAGGTATA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TAGCAG
AGTTTTTCTGAGGAGGCTACATGGCAGGGTGA---TCT--TATCTCCTTAGAAACGGGGCGGTTGGCGATATATATAACC
TGCGGGCGATC---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATATATGTAGCTGTTTGTATCGTTTTCTGTGC
TTACGGTTTGG----TGAATGGTTTCACATAATAAGTGCTATGGTCCAGTATACAAATCATAT-----------------
----------------------------------AGGAAATTGCATGTTCTCAATAAAATTGTTGATTGATAATGGTGTT
TTATTGAA-CATAAATATATGGGAGACATATCTTTTCCATTATCCCTTGTGAAAGAAAAATCATCATATGAAAGCATTTC
CTCAATAAAAATAACAATGTTTTGGATCTATGCAAATCCGATGGAACGCACGTACAGTATAGAGCACCTTCCTGGAGGTA
TGGAGCGCTGGCCATCTGATCCGGACTGTTGCTGCCTGTACTGCTTGTAATATATTTCAGTGAGATTTGCTTGGAT----
-------------------------------------------------
>chr1A_750
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CCTGAATGTTCCTTAACC-
-ATCTTTTTTATTTACAAAGTGATCTATTTTTCGGCATAAGTGTCTCCTGAATAATATAGTAATTCATGCCTCGACTAAA
CAGCCCGGCTGATTTGTGAGCAAACGATCTATCCAGAAGTGCAGTGATAACATCGAAGCATCACCTAGTCATGCCGGCCA
GCTTTGTATGGATGCTAAGTAAGATTTTTTTTTTCCCGAGAATGCTAGATTAA---------------------------
----------GACACCTAGCCTATAAATCCTTGCGATATCAGAGACCTTTGCAGCCACACCACACGCA------------
--CGAG---------------ATATCTGAAGTAGTAATAAGTAGAAACACAGAGATGAGCTATCTAAAGACATCCTGGCC
GGAATTGGTGGGCGAGCCGGCGACACCGGCAGTGATGACGATTAACAGCCAAAGGCCCGACTTGACGACGGAGGTCCTTC
CGGTTGGGACCAGCCCAAGCCCACCAGGGTTCGACTCGACGCGTGTCTGCGTCTTCCTTGACCCAAGAGACAAACTTGGC
CGTGTTGCAGCCGTCCCTGTCGTTGGCTAGCT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr1B_830
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------ATTCATGCCTCGAGTAAT
CAGCCTCGTTGTTTCGTGAGCAAACGATATATCCAGAATTGA------AACATTGGAGCATCACCCGGTCATGCCGGCCC
TTTTTCTGTATGCATG----------------------------------------------------------------
---------------CTAGCCTATAAATCCAATGAAGTAT-CAGAGACTTGCAACCATACCACACGCAGAGCCTTCGTAT
ATTGAT---------------ATATCTAAAGCAATAGTCGGAACATACA---AGATGAGCTCTGGGAAGACGTCGTGGCC
AGAGTTGGTGGGCATGCCGGCGACACCAGCGGTGATGACCATCAACAGCCAGAGGCCTGACTTGACGACCGAGGTGCTCC
AGATTGGGATCAGTCCAAGCCCACCTGGGTTCGACTCGACACGAGTCTGTGTGTACCTCGACCCACGAGACAAGCTTGGC
CTTGTTGCAGCCGTCCCCGTCGTTGGCTAGATACA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TAGCAG
AGTTTTTCTGAGGAGGCTACATGGCAGGGTGA---TAT--TATCCCCTTAGAAACGGGGCGGTTGGCGATATA----ACC
TGCGGGCGATC---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATATATGCAGCTCTTTGTGTCGTCTTTTGTGC
TTATGGCTTGG----TGAATGGTTTCATATAATAAGTG-TATGGTCCAGTATACAATTTATTT-----------------
----------------------------------AGGAAACAGCATGTTCTCAATACAATTGTTGATTGATAATGGTGTT
TTATTGA---------------------TATCTTTCCGTTGACCCTTTGTGAAAGGAAAATCATCATACGAAAGCATTTC
CTCAATAAAAATAACAATGTTTTGGATCTATGAAAATCCTATGGAACACACGTACAGTATAGAGCACCTTCCTGGTGCTA
TGGAGCGCTGGCCGTGTGATTCGGAGTGTTGCTGCGTGTACTGGTTCTAATATATTTCAGTGAGATTTGGTTGGAT----
-------------------------------------------------
>chr1B_1089
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------CC
GGAGTTGGTGTACATGCCGGCGACGCCGGCAGTGATGACCATCAATAGCGAGAGACCGGACTTGACGACGGAGGTACTCC
AGATTGGTACCAGCCCAAGCCCACCGGAGTTCCACTCGACATGTGTCTGCGTCTTCCTCGACCCACGAGACAAGCTTGGC
CTTGTTGCAGCCGTCCCCGTCGTTGGCTAGCTCCA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TAGGAG
AGTTTCTTTTATGGAG-TACATAGCAGAGTTC---TACCATA-TCCCGTAGAAACAGGCATGTTGGTCATATG----CCC
CAGTGGGGATC---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATATATGTAGCTCATCGTCTCGTTTTTACA--
TTATGGTTTGTCGAATAAATGGTCTACTGAATCAGTGG-TATGGTCAAGTATACAGTTCAGTTTTTTCAACACGAATTCA
TTTGCGAAATTGCTGGTTCGCCCTCACCGAGTCAAGGAAATTGCTTCACCGACGA-------------------------
----------------------------------------------TAGTTTCTGCACGACCATCAAATGATAGTTCCTC
CGCGACAGCGCTCCTCTGGGCACTCTCGCTGTTGGCGCTGCCACGTAAGAATCATA------------------------
---------------------CAGGCGTTGGCTGCACGTTCGTCGTCGTGTGTATATCAGCGCTCCTGAGTAAAATCCAG
CCGACTCAGTTGCTGGGTGAAGAAAGTTGCATAGGCTACGAGATAATCA
>chr1B_1713
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TATATCTCAAGCAATAGT
AGGAACACACAAGATGAGCTCTGGGAAGACATCATGGCCGGAGTTGGTAGGCATGCCGGCGACACCAGCTGTGATGACCA
TCAACAGCCAGAGGCCTGACTCGACGACCGAGGTGCTCCAGATTGGGATCAGTCCAAGCCCACCTGGGTTCGACTCGACA
CGAGTCTGTGTGTACCTCGACCCACGAGACAAGCCTGGCCTTGCTGCAGCCGTCCCTGTCGTTGGCTAGATACATAGAAG
AGTTTTTCTGAGGAGGTTACATGGAAGGGTGA---TGT--TA-CCCCTTAGAAATGGGGCGGTTGGCGATATA----ACC
TGTGGGCGGTTATGTATGTATAACATGTTACATGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGC
TTATGGTTTGGTGAATGGTTTCACATAATACATGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGC
TTATGGTTTGGTGAATGGTTTCACATAATACATGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGC
TTATGGTTTGG----TGAATGGTTTCACATAATAAGAG-TATGGCCCGGTATACAATTCATTT-----------------
----------------------------------AGGAAATTGCATGTTCTCAATACAATTGTTGATTGATAATTGTGTT
TTATCGG-TCACAAATATATGTGAGACATATCTTTTCCAATACCCCTTGTGAAAGAAAAATCATCATACGAAAGCATTTC
CTCAATGAAAATAACAATGTTTTGGATCTATGAAAATCCTATGGTACGCGCGTACAG--TAGAGCACCTTCCTGGCGCTA
TGGAGCGCTGGCCATCTGATCCAGAGTGTTGCTGCGTGTACATGTTGTAATATATTTCAGCGAGATTTGGTTGGAT----
-------------------------------------------------
>chr1B_1713
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TATATCTCAAGCAATAGT
AGGAACACACAAGATGAGCTCTGGGAAGACATCATGGCCGGAGTTGGTAGGCATGCCGGCGACACCAGCTGTGATGACCA
TCAACAGCCAGAGGCCTGACTCGACGACCGAGGTGCTCCAGATTGGGATCAGTCCAAGCCCACCTGGGTTCGACTCGACA
CGAGTCTGTGTGTACCTCGACCCACGAGACAAGCCTGGCCTTGCTGCAGCCGTCCTTGTCGTTGGCTAGATACATAGAAG
AGTTTTTCTGAGGAGGTTACATGGAAGGGTGA---TGT--TA-CCCCTTAGAAATGGGGCGGTTGGCGATATA----ACC
TGTGGGCGGTTATGTATGTATAACATGTTACATGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGC
TTATGGTTTGGTGAATGGTTTCACATAATACATGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGC
TTATGGTTTGGTGAATGGTTTCACATAATACATGTAAGGTTACATGTAATATATGTAGCTGTTTGTATCTTTTTTTGTGC
TTATGGTTTGG----TGAATGGTTTCACATAATAAGAG-TATGGCCCGGTATACAATTCATTT-----------------
----------------------------------AGGAAATTGCATGTTCTCAATACAATTGTTGATTGATAATTGTGTT
TTATCGG-TCACAAATATATGTGAGACATATCTTTTCCAATACCCCTTGTGAAAGAAAAATCATCATACGAAAGCATTTC
CTCGATGAAAATAACAATGTTTTGGATCTATGAAAATCCTATGGTACACGCGTACAG--TAGAGCACCTTCCTGGCGCTA
TGGAGCGCTGGCCATCTGATCCAGAGTGTTGCTGCGTGTACATGTTGTAATATATTTCAGCGAGATTTGGTTGGAT----
-------------------------------------------------
>SNPs
---S------------------S-S---------------S----------------------------------S----
-----------------------S-----------S--------------------S-SS---S-S---SS--S------
--S---S-----S-----------S---SS--------SS----------------------------------S--S--
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S-S----S---------S--S----------------------------------
-------------S-----------S--------S--S------------SS---------------------S-S----
-----------------------------SS--S-------------------------------S--------------
------------------------S--------------------------------------------S----------
-------------------------------------------------------------S------------------
----------------------S-----------S----S---S----------------------------S-----SS
-----------S--------------------------S----S--S------S--S---S-------------------
-------S------------------S-S---------------------------------------------------
----------------------------------------------------------------S-------S-------
-------------------------------------------------S-S----------------------------
--------------------------------------------------------------------------------
---S---S-------S----------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------SS----S----
------------------------------S--S-S------------S--------------S-SS--S----------
------------S---S----S--S-S----------------------------------S--SS-S------------
--S----------S--------S-----------S-S------S-------------------------S--------S-
S--------S--------------S------SSSS-----S-S---------S------S----SS----------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-----------S-----------------S-------SS----------S------------------------------
--------------------------------------------------------SSS---------------------
-----SS---------------------------------------S--S-------S----------------------
---------------------------------------------S-----S---S--------------S-S-------
SS-------S------------------------S-------SS------------S-S-------S-----S---SS-S
-------------------------------------------------
>forward_23
---CGCGCTTAATGTCTCCATGG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_1747
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GAGTTGAAACAAAC
GGGGCC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_1716
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CCGTCGTTGGCTAGATCCAA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_3050
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CGCCATCTGATCCGGATGTT---------------------------------------------------
-------------------------------------------------
