>input_sequence_81027
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------------------------------------------------------------ATGAGTGTAGAAATCCTTGA
TGGCAAGACCGTCCAGAGCTTCGTCGAGGACGAAGGCGCCTTCCACTCATCCGTGGACAGCCGGTTTGCGGCCCTCGACA
CCAACCATGATGGCCTGCTGTCGTACTCCGAGATGGCCCAGGAGCTCATGAGCCTCAGGGTTCTTGAGAAGCACTTTGGC
GTTGATGAGTCCGCCATGAGCCGTGGTGAGCTTGTCGAGCTTTACCGTGGCCTGTTTGCGAGGTTCGACCGAGACGGCAA
TGGCACGGTGGACCTTGAGGAGTTCCGGGCTGAGATGAAGGAGGTGATGCTCGCTGTGGCTAACGGGCTCGGCTTCCTGC
CGGTGCAGATGGTGGTCGAAGAAGGCAGCTTTCTGAAGGTGGCTGTGGACCGGGAGCTGGCCAAAGCAACTTGA------
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>chr5B_1_TraesCS5B01G260800
TGGCCTCCTTGCAAGCGTCATGGTGGAAACCCTCTCTAGCTCGTGGTGGGCTACCCGTGATAGATCGGGATCGAAGAAAA
GCTAATCTTTGACTTGGTGAGCGCTAATGGTAGCGCATGTGGACGTCGTTCTCTTCCTTGGAAGCGTTGCCATTTCCCCC
TTCCCCTAGCAGCCTTGGTTCACTCAGTGTGGCGCGCTCGGTGAGTTTAGGACCAAGCTACTCTTTGGTGTGCATGCTCA
TGATCCTCCCATGGCTACCGTTGTGTTGCGGCGAGCTCCGTGCTCCTGGTGGTTGTGGTTCATCTTTGCTTAATAATGAC
GTAAGATGCCTCCCCAACATTGCTAGTCGTTTCAAATTTCCACGGCGGAACTCCTGGTCAAGGTTCGTGTTTGGCTATAA
CACTCATTGATTGTATTGCACCGTGGGGTTCGATACGCATGCCGGTGCAGTGCGTTAGGCTGCTTGTAAAGTCTTGGTAT
TGTGATCCCTCGACGACATCCCACATCTCCTTGAGGCTCTCGTGGTGAAGGACAAATGGTTAGAGCAGGTGCATTTTCAT
ATTCACGTTAATTCGGTACTTTATGGCTCAAATAATA-AATTGGGACAAAGTTAGTTGCTCCATTGCCAAAGCTGGGTGG
ACCAGAGAC-----TTTTCTT---AGATTTCGCAAATGACGGCTTCAAAC-AATTCAATATCACAACAGCTAGCATCTGC
CAAAGTATTCATTGCCCATAGCATACAACATACC-----AAAAACCACAGGCCGCTTCTCACCACCGAAGCTAGTGATAG
CAGTTGGCAACACGCCAAC-----ATAGCACTGAAATGCCCCAAAACCGCAGGCTGCTTCTGACCAGGACGAAACCAGTT
AGCAGTTGGCAACATGGCACTGAAATATCCATGAAAAACCATCTGCTAAGTAGCCTACTTAAACAGCAAACACCAGCTTC
ACACTCCCTCAGAGCCAAACCAGAACACAACTTTGCCACATCCACATCCTGAGAAACAACATGAGTGTAGAAATCCTTGA
TGGCAAGACCGTCCAGAGCTTCGTCGAGGACGAAGGCGCCTTCCACTCATCCGTGGACAGCCGGTTTGCGGCCCTCGACA
CCAACCATGATGGCCTGCTGTCGTACTCCGAGATGGCCCAGGAGCTCATGAGCCTCAGGGTTCTTGAGAAGCACTTTGGC
GTTGATGAGTCCGCCATGAGCCGTGGTGAGCTTGTCGAGCTTTACCGTGGCCTGTTTGCGAGGTTCGACCGAGACGGCAA
TGGCACGGTGGACCTTGAGGAGTTCCGGGCTGAGATGAAGGAGGTGATGCTCGCTGTGGCTAACGGGCTCGGCTTCCTGC
CGGTGCAGATGGTGGTCGAAGAAGGCAGCTTTCTGAAGGTGGCTGTGGACCGGGAGCTGGCCAAAGCAACTTGAAGAAAC
TGCTTGGAACGACTTTCCAGAATCAGGAGGCTGCATGTTCACGAATTGTAACTTTTATTCTGCCAATTTTGTTGTGCTAC
AACTACACCGGTGCTAGTTATTTGTACTTAATAAGTGAAACAGAAGCCACAACATCAGTTTAATTTACAAAATGACAAGC
TATTTATGTAAAGGGAAATGTTGTAAATCTATGTTTGTGGATGCCTAC-----------CAAACTAGCAGTTTTAGAATT
TGGGTGTTTTGTTTTCACTCCAGAAGCTGATTATGTTATGACGACTGAAAATTCAGAAACAATATGTTCAGAAGAGTCAC
CAAGAAGAATCAGATTAACACAAATTGAATCAACCGCATATATCAAAATTCAAGAAAGTGCATTTCAATTCAACACCACA
TGTTAGTACGAAAGAGAAGTTAACAGAGTTTTGCTACAAAGAAATTAACTGAAGAAAAGTATGCACCGATTGCAGAACTG
GTAGCAACTTTACATTACCAGCACCAGAGCTAACACTGTCAGAATAGCTCATCAACTGATATTGTGTTGTCTTCCGTCTG
CTTCATCTGCTA-CTCACAGGTCTCATGCATAATTTACTCAACATGCCGTTTCTAGACCTGCAGAATGTAAGCCATTGGA
CGAAAGAAGAACCCATGCTGCCCTTTCTGAATAAAGTTTAACACCTCCCAAAATGTTCTTTTGCTAATAGATCAATCCTG
ATGTGCAATTTGGCACCTGCAAATTTAGGTATAACATACACCGCCAGTAATCCAGATCCATGCTCTGGATAACAACTTCA
AAAACTTGAAGAACTGTTAGATGATGGCAACGAAGAACCGAGCCATATACTGCTAATACTGCTGCTGTGGCATTGTCCGA
AACGCCAATACAATCGC-AACCCATGAGCTCAATCGTTCTTCTCCTCGAGCTCACCTTCAAAAGCATCATGATTGATCTC
CAATGGAGAATCTTTGATCTCCAATGACCTCAGGAAGTTAAAGTAGG
>chr5A_529
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------------------------------------------------AGGATAAATAGTTAGAGCGGGTGCATTTTTGT
ATATGCCTTAATTC-GTACTTTGTGGTTCAAATAATATAATTGGGACAAAATAAGTTGCTCCATTGCCAAAGCTGGGTGG
ACCAGAGAC-----TTTTCTTCTAAGATTTCGCAAATGGCGGCTTGAAACAAATTAAATATCACAACAGCTAGCATATGC
AAAAGTATTCAT-GCCCATAGCATACAACATACT-----AAAAACCACAGGCCGCTTCTCACCGCCAAAGCTAGTGATAG
CAGTTGGCAACATGCCAATATAGTATAGCACTGAAATGCCCCAAAACCACAGGCTACTTCTGACCATGACGAAACCAGTT
AGCAGTTGGCAACATGGCACTGAAATATCCATGAAAAACCATCTGCTAAGTAGCCTATTTAAACAGCACACACCTGCTCC
ACATTCCCTCAGAGCCATACCAGAACACAACTTTGCCACATCCACATCCTGAGAAACAACATGAGTGTAGAAATCCTTGA
TGGCAAGACCGTCCAGAGCTTCGTCGAGGACGAAGGCGCCTTCAACTCATCGGTGGATGGGCGGTTTGCGGCCCTCGACA
CCAACCATGATGGCCTGCTGTCATACTCCGAGATGGCCCAGGAGCTGATGAGCCTCAGGGTTCTTGAGAAGCACTTTGGC
GTTGACGAGTCCGCCATGAGCCATGGTGAGCTTGTCGAGCTTTACCGTGGTCTGTTTGCGAGGTTCGACCGAGACGGCAA
TGGCACGGTGGACCTTGAGGAGTTCCGGGCTGAGATGAAGGAGGTGATGCTCGCTGTGGCTAACGGGCTCGGCTTCCTGC
CGGTGCAGATGGTGGTCGAGGAAGGAAGCTTTCTGAAGGTGGCTGTGGACCGGGAGCTGGCCAAAGCAACTTGAAGAAAC
TGCTTGGAACGACTTTTCAGAATCAGGAGGCTGCATGTTCACGAATTGTAACTTTTATACTGCCAATTTTGTTGTGTTAC
AACTATACCGGTGCTAGTTATTTGTACTTAATAAGTGAAACAGAAGCCACAGCATCAGTTTAATTGACAAAATGACAAGC
TAGTTATGTAAAGGGAAATGTTGTGAATCTATGTTTGTGGATGCCTACATGAGAAATATCAAACTAGCAGTTTTAGAATT
TGGGTGTTTTGTTCTCACACCAGAATCTGATTATGTTATGACGACTGAAAATTCAGAAATAATATGTTCAGAACAGTCAC
CAAGAAGAATCAGATTAACACAAACTGAATCAACCGCGTATATCGAAATTCAAGAAAGTACATTTCAATTCAACACCTCA
TGTTAGTAC-AAAGAGAAGTTCACAGAGTTTTGTTACAAAGAAATTAACTGAAGAAAAGTATGTATCGGTTGCAGAATTG
GTAGCAACTTTACATTACCAGCACCAGAGCTAACACTGTCAGAATAGCTCATCAACTGATATTGTGTTGTCTTCCGTCTG
ATTCATCTGCTA-CTCACATGCCTCATGCATATTTTACACAAGATGCCGTTTCTAGACCTGCAGAATGTAAGCCATTGGA
CGAAAGAAGAACCCATGCTGCCCTTTCTGAATGAAGTTTAACACCTCCCAAAATGTTCTTTTGCTAATAGAGCAATCCTG
ATGTCCAATTTGGCACCTGCAAATTTAGGTATAACATACACCGCCAGCAATCCAGAT------TCTGGATAACTACTTCG
AAAACTTGAAGAACTGTTAGATAATGGCAACGAAAACCCGAGCCATATACTGCTAATACTGCTGTTGCGGCATTGTCCGA
AACGCCAATACGATCGC-AACCCATGAGCTCAATCCTTCTTCTCCTCGAGCTCACCTTCGAAAGCATCATCATTGTTCTC
CAATGGAGAATCTTTGATCTCCAGTGACCTCACGAAGTTAAAGTAGG
>chr5D_529
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------------------------------------------------AGGACAGATAGTTAGAGCGGGTGCATTTTCGT
ATTCGCTTTAATTC-GTACTTTGTGGTTCAAATAATATAATTGGGATAAAATAAGTTGCTCCACTGCCAAAGCCGGGTGA
ACCACAGACTTTTTTTTTCTC---AGATTTCGCAAATGACCGCTTGAAACAAATTAAATGTCACAACAGCTAGCATCTGC
AAAAGTATTCAT-GCCCATAGCATACAACATACTGTACTAAAATCCACAGGCCGCTTCTCACCACCGAAGCTAGTGATAA
CAGTTGGCAACATGCCAATATAGTATAGCACTGAAATGCCCCAAAACCACAGGCTACTTCTGACCGGGTCGAAACCAGTT
AGCAGTTGGCAACATGGCACTGAAATATCCATGAAAAACCATCTGCTAAGTAGCCTATTTAAACAGCACACACCAGCTTC
ACATTCCCTCAGAGCCAAACCAGAACACAACTTTGCCACATCCACATCCTGAGAAACAACATGAGTGTAGAAATCCTTGA
TGGCAAGACCGTCCAGAGCTTCGTCGAGGACGAAGGCGCCTTCCATTCATCCGTGGACGGCCGGTTTGCGGCCCTCGACA
CCAACCATGATGGCCTGCTGTCGTACTCCGAGATGGCCCAGGAGCTCATGAGCCTCAGGGTTCTCGAGAAGCACTTTGGC
GTTGATGAGTCCGCCATGAGCCGTGGTGAGCTTGTCGAGCTTTACCGTGGCCTGTTTGCGAGGTTCGACCGAGACGGCAA
TGGCACGGTGGACCTTGAGGAGTTCCGGGCTGAGATGAAGGAGGTGATGCTCGCTGTGGCTAACGGGCTCGGCTTCCTGC
CGGTGCAGATGGTGGTCGAGGAAGGCAGTTTTCTGAAGGTGGCTGTGGACCGGGAGCTGGCCAAAGCAACTTGACGAAAC
TGCTTGGAACGACTTTTCAGAATCAGGAGGCTGCATGTTCACGAATTGTAACTTTTATTCTGCCAATTTTGTTGTGTTAC
AACTACACCGGTGCTAGTTATTTGTACTTAATAAGTGAAACAGAAGCCACAACATCAGTCTAATTTACAAAATCACAAGC
TATTTATGTAAAGGGAAATGTTGTAAATCTATGTTTTTGGATGCCTACATGAGAAATATCACACTAGCAGTTTTAGAATT
TGGGTGTTTTGTTTTCACTGCAGAATCAGATTATGTTATGACGACTGAAAATTCAGAAAGAATATGTTCAGAACAGTCAC
CAAGAAGAATCAAATTAACACAAAATGAATCAACCGCGTATATCCAAATTCAAGAAAGTACATTTCACTTCAACACCTTA
TGTTAGTAA-AAAGAGAAGTTTACAGAGTTTTGTTACAAAGAAATTAACTGAAGAAAAATATGTATCGGTTGCAGAATTG
GTAGCAACTTTACATTACCAGCACCAGAGCTAACACTGTCAGAATAGTTCATCAACTGACATTGTGTTGTCTTCCGTCTG
ATTCATCTGCCTGCTCAAATGTCTCATGCATAATTTAGTCAAGATGCCGTTTCTAGACCTGCAGAATGTAAGCCATTGGA
CGAAAGAAGAACCCATGCTGCCCTTTCTGGATAAAGTTTAACACCTTCCAAAATGTTCTTTTGCTAACAGATCAATCCTG
ATGTGCAATTTGGC----------------ATAACATACACCGCCAGTAATCCAGATCCATGCTCTGGATTACTACTTCA
GAAACTTGAAGAACTGTTAGATAATGGCAACGAAAAACCGAGCCATATACTGCTAATACTGCCTATGCGGCATTGTCCGG
AACGCCAATATGATCACAAACCCATGAGCTCATTCGTTCTTCTCCTCGAGCTCACCTTCGAAAGCATCATCATTGTTCTC
CAATGGAGAATCTTTGATCTCCAGCGACCTCAGGAAGTTAAAGTAGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S--------S-----------S-
----S-S-------S-------S---S-----------------------S-S---------------------------
---------------------------------------------S---------S------------------------
S-----------S--------------------S----------------------------------------------
------------S-----S-----------------------------S------S------------------------
---------------------------------------------------------S----------S-----------
---S----------------------------------------------------------------------------
----------------------------------------------------------S---------------------
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-------------------S------------------------------------------------------------
----------------S-----------------------------------------------------------S---
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-------------------------S---------------------------------S-------------S------
------------------------S------------S------S--------------S-----------------S--
---------S-----------S-----------S-----------------------------S-S--S--------S--
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S------------------S----------------------S-------------------------------------
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-------------------------------------------------------------------------S------
----------------------S-----------S-----------------------------S--S------------
-----------S-----------------------------------------------S----------S----S----
-----------------------S-----------------------
>forward_395
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-------------------------------------------------------GGTCAAGGTTCGTGTTTGGC-----
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>reverse_2332
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-----------AATCGCAACCCATGAGCTCA-------------------------------------------------
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