>input_sequence_80973
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-------------------------------------------------------ATGTTGAGGATGCAGCAGCAGGTGG
AGGGCGTGGTGGGCGGCGGCATCGTGGCCGAGGCGGAGGAGGCGGCGGTGTACGAGCGGGTGGCTCGCATGGCCAGCGGC
AACGCCGTGGTCGTCTTCAGCGCCAGCGGCTGCTGCATGTGCCACGTCGTCAAGCGCCTCCTGCTTGGCCTGGGAGTCGG
CCCCACCGTCTACGAGTTGGACCAGATGGGCGGCGCCGGGCGGGAGATCCAGGCGGCCCTGGCGCAGCTGCTGCCCCCCG
GACCCGGCGCCGGCCACCACCAGCAGCCGCCGGTGCCCGTGGTGTTCGTCGGCGGGAGGCTCCTGGGAGGCGTGGAGAAG
GTGATGGCGTGCCACATCAACGGCACGCTCGTCCCGCTCCTCAAGGACGCCGGCGCGCTCTGGCTCTGA-----------
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>chr2A_1_TraesCS2A01G251700
TGGGACGTGAAGGAGGTGACGATGGGCGTGACGGCGTTTGGTGGCAGTGGGGCCGAGGAGTCAAACGGCGGCTGAGGGGG
ACGTCGTGCTGTCGGCTTGTCGGCTGCCGTGACGATCGACGCTTGTCTTGTCACGTCGTGTCCATGCTTCGTTCCCTTCC
TCCCTCCCTCCCTCCGTATAGTCGGCGTTCAAATTCTTGGCCTGCAGATACATGTAAATTCCTAAGT-------------
----------------------------------------------TTGAAGGCACATTGGTTCATTATA----------
---AAGAAAATAGTTTTGCTGACCGAGACTTCGTTATATCTCAGTTGATGTTATTTTTCTTTAATTTTGCATGAAGATTC
GTACAAAAAATATATTTTCAGTTTTTTTTCTCTTTTTCTTCTTACATACTACTGTATATCATTTGAGTGAGACTTGGTTA
AGTCTCAGTCGACTGAGACCTAACCACACCCTAAAAGAAAAGAGTACTATTAATTGATTTTGCTGATGTGCCACAACATG
AGTAGATTAGGCGGCCGTGCATGCATGC-----------TAGGATCGGCTC---GCCATGCCATGCATC-CATCCATCTT
TCGGCCATCCCTTTGCTTTTTTCCTTCTCCTCGTCTACGGACAAAAGCTACTACCGCATAGCTCTTTAGCTTGCTCCTCG
CTTTACTCTCTATCTCATCTCTTGTAACCGTAGTGGAATGGGGTGGAGTAGTGGTGGTCAGAGTGTGCCGGGTTCGTTGC
GGAGCTCGCGACAGGCTCTGCCAAAAGCGATCCATGTCTCTTTGACTCCCCACACCCCACCCCCGTATACTCCCTTCCCT
TCTCCCATCACACTTCCATTCGAGAGACACACACACACACCCTTCGACCTGTCCG--CCTCTCCTATATAAACGCACGTC
CACCGCTCCCTGTTTTCTTCATCCTCGTTCCCTTGCACTGCGCCAACAAACAATTAACTAC------ACTCTCACTAGCT
AGCTAGGCGAGGCTAGGCCGGCGAGGGAGAAGGAGAAGGAGAAGTAGGCGCCAAGATGTTGAGGATGCAGCAGCAGGTGG
AGGGCGTGGTGGGCGGCGGCATCGTGGCCGAGGCGGAGGAGGCGGCGGTGTACGAGCGGGTGGCTCGCATGGCCAGCGGC
AACGCCGTGGTCGTCTTCAGCGCCAGCGGCTGCTGCATGTGCCACGTCGTCAAGCGCCTCCTGCTTGGCCTGGGAGTCGG
CCCCACCGTCTACGAGTTGGACCAGATGGGCGGCGCCGGGCGGGAGATCCAGGCGGCCCTGGCGCAGCTGCTGCCCCCCG
GACCCGGCGCCGGCCACCACCAGCAGCCGCCGGTGCCCGTGGTGTTCGTCGGCGGGAGGCTCCTGGGAGGCGTGGAGAAG
GTGATGGCGTGCCACATCAACGGCACGCTCGTCCCGCTCCTCAAGGACGCCGGCGCGCTCTGGCTCTGAGCC-------G
CATTGCTTTGCTGTCTCGCCGGCCGGCCGGAACTGATGATGGTGGTGATCAACGACGGCGTTTACTTTGTGTGTTGGTCG
TCTTTTCTTTTCTTTTCTTTTCTTTTCATGTGCCGTGCCTGTGCCTGTGGCT----------------------------
------GTGCGATGGATGGACGCGTGCGTGCAATGCATGGTGTGTTGAGCTTCACTGGCTAGTGAGATGTAGATATAATT
AACAAGGAAAGCTTAATTAGCCTTGTCAGTTGCGTGTGTTTGTGTTTTGTTTTTTTAGGTGATGGTTATCTAGCACGTAC
TAGTTCGTTACAGAGTCAGAGTGGAGTGGAAGGATACTTAGCCATCAGATGAGATCAGACCAACAATGTAATGCAATGCA
ATGAAGCCTAGCAAGCTAGCATGCACATGGCGTTATTATTATCCTGAGATAAATCAAGTATCTGTCCACCGTAAACCATA
CATACTATCATCTCTATCCATGTTCGTGTATATACTTTTCGAAAAATGTTCGTGTATACTGCTACTACTCAATTGGACGT
TTTGATGGG--TACATGCATCGCATTCGCATGCATACTTGTAC---TACTCCTAGTAGAGGAAAAATAATCCTAATAAGA
GTATAATAGTTGAAGGTGTAGTACGTAGCATTTTGTTGGTGGAAAATTGAATTTT-------------------------
-----GAATTGATGGAAAGTGGGAAGATGCGTCCACAGAAGGTGATGCACGCGACTGTCCGTAGTAGAGG----------
-ACCGGTACGTACGCACGCAGTCGCAGATGCCAGACGCATGCAGCAGCAGATCAGAGCCGCATGAAACGTGACTTGCCTT
T-TTTTTGGAGGGCTTGGTTCAAAGGCGTGATGT-----AGCATAGCATGCATGCATGAAGCGGTTGCCGTGAGATGCTT
TAACCTCACTGTACCGGCTAGTTTTTAGCACATTTTTACTTTTTTGTTGCTCATGGCCGGTAAGAAT-CTGAGGTTAGCT
-AAGACTAGATGCCGCTGGCAAGCAAGCA--CGGTTCGTGTGACGA
>chr2D_1
TGGGACGTGAAGGAGGTGACGATGGGCGTGACGGCGTTTGGTGGCAGTGGGGCCGAGGAGTCAAACGGCGGCTGAGGGGG
ACGTCGTGCTGTCGGCTTGTCGGCTGCCGTGACGATCGACGATTGTCTTGTCACGCCGTGTCCATGCTCCGTTC----CC
TCCCTCCCTCCCTCCGTATAGTCGGCGTTCAAATTCTTGGCCTGCAGATACATGTAAATTCCTAGTAC------------
TTAGAATTCGCCTGTAAATCGAGATGGACAATATTTTCTGAGAGCGTTAAAGGCCCATTGGTTCATTATA----------
---AAGAAAAGGAG------------------------------------------------------------------
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--------------------------------------------------TAACTGATTTTGCTGATGTGCCACAACATA
AGTAGATTAGGCGGCCGTGCATGCATGCATGCTACGGAGTAGGATCGGCTC---GCCATGCCATGCATTGCATCCATCTT
TCGGCCATCCCTTTGCTTTTT-CCTTCTCCTCGTCTACGCACAAAAG---CTACCGCATAGCTCTTTAACTTGCTCCTCG
CTTTACTCTC------ATCTCTTGTAACCGTAGTGGAATGGGGTGGAGTAGTGGTGGCTAGAGTGTGCCGGGTTCGTTGC
GGAGCTCGCGACCAGCTCTGCCAAAAGCGATCCATGTCTCTTTGACCCCCCACACCCCACCCCCGTATACTCCCTTCCCT
TCTCCCATCACACTTCCATTCGAGA------CACACTCACCCTTCGACCTGTCCG--CCTCTCCTATATAAACGCACGTC
CACCGCTCCCTGTTCC--TCATCCTCGTTCCCTTGCACTGCGCCAACAAACAATTAACTAC------ACTCTCACTAGCT
AGCTAGGC-----TAGGCCGGGGAGGGAGAAGGAG------------GCGCCAAGATGTTGAGGATGCAGCAGCAGGTGG
AGGGCGTGGTGGGCGGCGGCATCATGGCGGAGGCGGAGGAGGCGGCGGTGTACGAGCGGGTGGCTCGCATGGCCAGCGGC
AACGCGGTGGTCGTCTTCAGCGCCAGCGGCTGCTGCATGTGCCACGTCGTCAAGCGCCTCCTGCTTGGCCTGGGGGTCGG
CCCCACCGTCTACGAGTTGGACCAGATGGGCGGCGCCGGGCGAGAGATCCAGGCGGCGCTGGCGCAGCTGCTGCCCCCCG
GACCCGGCGCCGGCCACCACCAGCAGCCGCCAGTGCCCGTGGTGTTCGTCGGCGGGAGGCTCCTGGGCGGCGTGGAGAAG
GTGATGGCGTGCCACATCAACGGCACGCTCGTCCCGCTCCTCAAGGACGCCGGCGCGCTCTGGCTCTGAGCCGCGAGCTG
CATTGCTTTGCTGTCTCGCCGGCCGGCCGGAACTGATGGTGGTGGTGATCAACGACGGCGTTTACTTTGTGTGTTGGTCG
---------------TCTTTTCTTTTCTTGTGCCGTGCCTGTGGCTGTGGCT----------------------------
------GTGCGT---------------------TGCATGGTGTGTTGAGCTTCACTGGCTAGTGAGATGTAGATATAGTT
AACAAGGAAAGCTCAATTAGCCTTGTCAGTTGCGTGTG-------TTTGTTTTTGTAGGTGACGCTTATCTAGTTAGA--
-----------------------GAGTGGAGGGATACTAGCCATC------AGATCAGACCAACAATGTAATGCAATGAC
-----GCCTAGCAAACTAGCATGCACATTGTGTTATTATTATCCTGAGATAAATCAAGTATCTGTCCACCGTAAACCATA
GACACTATCATCTCTATGCATGTTCGTGTATACTGATGC-------------------------GTACTCAATTGGACGT
CTTGATTGGTATACATGCCTCGCAGTCGCATGCATACTTGTAGTAGTACTCCTAGTAGAGGAAAAATAATCCTAATAAGA
GTATAGTTGTTGAAGCTGTA----GTAGCATTTTGTTGGTGGAAAATTGAATTTT-------------------------
-----GATTTGATGGAGAGTGGGAAGACGCGTCCACAGAAGGTGATGCACGCGACTGTCCGTAGTAGAGTAGTACGCTGG
TACCGGTACGTACGCACGCAGTCGCAGATGCCAGACGCATGCAGCAGCAGAGCAAAGCCCCATGAAACGTGACTTGCCTT
TTTTTTTTGGAGGCTTGGTTCAAAGGCGTGAGGTAGCTTTAACCTCA---------------------------------
----CTCACTGTACCGGCTTGTTTTTAGCAGACG----CTTTTTTGTTGGTCATGGCCGGTAAGAATGCTGAGGTTAGCT
-AAGACTAGATGCCGCTGGCAAGCAAGCACT--GTTCGTGTGACGA
>chr2B_1
TGGGACGTGAAGGAGGTGACGATGGGCGTGACGGCGTTTGGTGGCTGTGGGGCCGAGGAGTCAAACGGCGGCTGAGGGGG
ACGTCGTGCTGTCGGCTTGTCGGCTGCCGTGACGATCGACGCTTGTCTTGTCACGCCGTGTCCATGCTCCGTTC----CC
TCCCTC--------CGTATAGTCGGCGTTCAAATTCTTGTCCTGCAGATACATGTAAATTCCTACAGTAGTACTACTACT
TTAGAATTCGCCTGTAAATCAAGATGGACATTATTTTCTGAGAGCGTTGAACGCCCATTGGTTCATTATATTATAGGAGT
ATAAAGAAAAGGGG------------------------------------------------------------------
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--------------------------------------------------TAATTGATTTTGCTGATGTGCCACGACAGG
AGTAGATTAGGCGGCTGTGCATGCATGCATGCTAGGATCGCCTCGCCATGCCATGCCATGCCATGCATC-CATCCATCTT
TCGGCCATCCCTTCGCTTTTT-CCTTCTCCTCGTCTACGCACAAAAG---CTACCGCATAGCTCTTTAACTTGCTCCTCG
CTTTACTCTC------ATCTCTTGTAACCGTAGTGGAATGGGGTGGAGTACTAGTGGTCAGAGTGTGCCGGGTTCGTTGC
GGAGCTCGCGACCGGCTCTGCCAAAAGCGATCCATGTCTCTTTGACTCCCCACACCCCAC-----------CCCTTCCCT
TCTCCCATCACACTTCCGTTCGAGA------CACACACACACACCCTGTCCGCTTCTCCTATCCTATATAAACGCACGTC
CACCGCTCCCTGTTTTCTTCATCCTCGTTCCCTTGCACTGCGCCAACAAACAATTAACTACACTCTCACTCTCACTAGCT
AGCTAGGC-----TAG---------------------------------GCCAAGATGTTGAGGATGCAGCAGCAGGTGG
AGGGCGTGGTGGGCGGCGGCATCGTGGCGGAGGCGGAGGAGGCGGCGGTGTACGAGAGGGTGGCTCGCATGGCCAGCGGC
AACGCGGTGGTCGTCTTCAGCGCCAGCGGCTGCTGCATGTGCCACGTCGTCAAGCGCCTCCTGCTTGGCCTGGGAGTCGG
CCCCACCGTGTACGAGTTGGACCAGATGGGCGGCGCCGGGCGGGAGATCCAGGCGGCCCTGGCGCAGCTGCTGCCCCCCG
GACCCGGCGCCGGCCACCACCAGCAGCCGCCGGTGCCCGTGGTGTTCGTTGGCGGGAGGCTCCTGGGCGGCGTGGAGAAG
GTGATGGCGTGCCACATCAACGGCACGCTCGTCCCGCTCCTCAAGGACGCCGGCGCGCTCTGGCTCTGAGCCGCGAGCTG
CATTGCTTTGCTGTCTCGCCGGCCGGCCGGAACCGA---TGGTGGTGATCAACGGCGGCGTTTACTTTGTGTGTTGGTCG
-----TCTTTTCTTTTCTTTTCTTTTCTTGTGCCGTGCCTGTGCTGTGGCTGTGCGTGGGCGATGGATGGACGCGTGCGT
GCGTGCGTGCGT---------------------TGCATGGTGTGTTGAGCTTCGCTGGCTAGTGAGATGTAGATATAATT
AACAAGGAAAGCTCAATTAGCCTTGTCAGTTGCGTGTG-------TTTGTTTTTGTAGGTGATGCTTATCTAGTTAGA--
-----------------------GAGTGGAGGGATACTAGCCATC------AGATCAGACCAACAATGTAATGCAATGAC
-----GCCTAGCAAGCTAGCCTGCACATCGTGTTATTATTATCCTGAGATAAATCAAGTATCTGTCCACCGTAAACCATA
CATACTATCATCTCTATGCATGTTCGTGTATACTGCTAC-------------------------CTACTCAATTGGACGT
TTTGATGGGTATACATGCCTCGCACTCGCATGCATACTTGTACTA---CTCCTAGTAGAGGAAAAATAATCCTAATAAGA
ATATAGTTGTTGGAGGTGTA----GTAGCATTTTGTTGGTGGAAAATTGAATTTTTTTTCGAGGGTACAAGGAAAATTGA
TTTTTGAATTGATGGAGAGTGGGAAGATGCGTCCACAGAAGGTGATG--------------------------------G
TACCGGTACGTACGCACGCAGTCGCAGATGCCAGACGCATGCAGCAGCAGAGCAAAGCACCATGAAACGTGACTTGCCT-
--TTTTTTTTAGGCTTGGTTCAAAGGCGTGAGGTAGCAGAGCATAGCATGCATGCATGAAGCGGTTGCCGTGAGATGCTT
TAACCTCACTCTACCGGCTAGTTTTTAGCAGACG----CTTTTTTGTTGGTCATGGCCGGTAAGAATGCTGAGGTTAGCT
AAAGACTAGATGTCGCTGGCAAGCAAGCATACGGTTCGTGTGACGA
>SNPs
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-------------------------------------------------------S------------S-----SSSS--
----------------------------------------------------------------SSS-------------
------------------------------------------------------S-------------------------
----------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------
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---------------------S-----------------S-------SSS------------------S-----------
----------SSSSSS----------------------------------------------------------------
------------S-------------------------------------------------------------------
-------------------------SSSSSS-------------------------------------------------
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--------SSSSS--------S-------------SSSSSSSSSSSS---------------------------------
----------------------------S---------------------------------------------------
-----S--------------------------------------------------------------------------
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-------------------------------------------------------------------S------------
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--------------------------------------S-----------------------------------------
SSSSS----------------------S----------------------------------------------------
-----------SSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------
-------------S------------------------SSSSSSS---------S---------S--------SSS-SSS
SSSSSSSSSSSSSSSSSSSSSSS-------S-------SSS-SSSSSSSSS---------------------------SS
SSSSS-----------------------S-S-------------------------------------------------
-----------------S--------------SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
------------------S-----S-------------------------------------------------------
-----S-S------------SSSS--------------------------------------------------------
----------------S----------------------------------------------------S----------
---------------------------------------------------S--S----S--------------------
-------S-SS--------------------S------------------------------------------------
------------------------------S-SSSSSS-----------S------------------------------
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>forward_157
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---------------------------------------------------------GTGTCCATGCTTCGTTCCCT---
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>reverse_1707
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--------------------------CGTGCAATGCATGGTGTGTT----------------------------------
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