>input_sequence_80968
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-------------------------ATGAACTTCCACGACGTCCACACGCTCCAGCAGGCGCTGGACGTCGCCCCGCCGC
CTCGTCTTCGCACGGCACAAGACCGTGTGGAACACGCTGAGCAGCAGCGCCGCATCCTCGTCGCCCATGAGGACGAGC-G
GGTCATGGCGGAGTGGCGCCAGCGCCACCCAGA-GGACGTCACTTACGAGCAAGCCTACTGGGCAAGGCGCCGCGAGGAG
GAGACGCAAAGGCGCCGCGATGAGCGGTTGGACAGACGTTGGCAGAAGGCCCTGGCATTATCGCAGTGCGAAATCGTTGA
GAATGGTGGGCAGACGATCTTTACGTCTGATGATGATCATTTGGACGACATGTGGCTCGATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGATGATGATGATGACGACGACGAGT-G-CGAGTAG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr1B_1_TraesCS1B01G436000
TGTTGGCTGCGGCATTACAATATCAACGGAGTATGGGCGGGTGGTCGAGCTGCTCAGCACGCGGTCAAAGCACCATGTGC
TTAGGGATGGTGTGGAGCTTGGGTGGCGGCTGGCGGAGCTGCCGGAAGGAGAGGAGGTGGCGTGGAAGGCCCTTGCTGAA
TTCTGGTCGGAAACCGTCGTTTGCATCGCCGCTTCCTGTGACGACATGGACGAGCATGCAGAGGCCATTGCCCGGGGCGG
GGAGCTGATAACGCTCCTATGGGCGTTGCTTTACCATGTCGGGAGTGTTGACAACGCAACAACTGCTGCCACTCATGGTG
TTGCTGATGATGTTGTTTAAGTGTGCAGCATACAATTGTACATGCGTGTACTTACTCTTCCTTTTGTTATAACATTGAAA
GTTTTTGTGTGTAGTGCTCCCAGTTTGAACAGCATGTAATGATCTTTTTAGTTCTTCAAAGAGTTTATAGTTGTTACTGT
GACAACGTCGGCGATCATCAGTGTCCAAGAGGAGGTTGCGTAGAATGACCTAGACGGCTCCTGGTCAGAGATGATCATCA
GGATCGCCGTTGGAGCATCTCCAACAGCCGCGCCAAAAGGCGTGCA----CGGTAAACCGAGTTTTTAGTGCGCGCGGGA
CGTTTCGGCGCGCTCCAGCGGTGGAGGGAAAGTCGCGCGCGCGGGAAAAGGCGGCAGCTCACGCGCTATTTTTGGCGCAC
CGCTTCCGGTGCGCCTTTAAATTGCGGCGCTTGCCGCGCGCCTATACCACACACTTCTCTTCCT----------------
-----------------------CTTCCGCTGCCACGCGTGCCACCGCTCCAGCGCCCCGCCA----------------C
CGCCGCGCCGTCGAGGAGCGTCGGGCTACCGCGGCGTCCGCCAGCGCCCCAACGGCGGGTTCTACTCCAAGATACGGTCC
GG------CGAACTCCAGCTCGGCCTCGGCACCTTCAAGACGGCGCACGAGGTCGCCCGCGTGTACGACGCGGCGGCGTG
GCGCCTAGGCAGGCCGTGCCCGCAGATGAACTTCCACGACGTCCACACGCTCCAGCAGGCGCTGGACGTCGCCCCGCCGC
CTCGTCTTCGCACGGCACAAGACCGTGTGGAACACGCTGAGCAGCAGCGCCGCATCCTCGTCGCCCATGAGGACGAGC-G
GGTCATGGCGGAGTGGCGCCAGCGCCACCCAGA-GGACGTCACTTACGAGCAAGCCTACTGGGCAAGGCGCCGCGAGGAG
GAGACGCAAAGGCGCCGCGATGAGCGGTTGGACAGACGTTGGCAGAAGGCCCTGGCATTATCGCAGTGCGAAATCGTTGA
GAATGGTGGGCAGACGATCTTTACGTCTGATGATGATCATTTGGACGACATGTGGCTCGATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGATGATGATGATGACGACGACGAGT-G-CGAGTAGG--CTATAGTTGCGTAT
GTAATTGCATTATCTAGTAAATGTTT--TTATGTCGT-----------TGCACTATCTAGTA------------------
--------GTTTT----TATCTATCTATGCTATGGAACTATGT-------------------------------------
-----------------------AAAATATCTATGTATCGTC-TTTT-CTATCTATGAATTTTATTTATCG--TTTTATT
-AAAAAAAT-GTACGCAATGTTTAGCGCGCGCTGCATTTTAGCGCGGCCGCTGGAGCTACACGCGCGTGC----TCAATT
TTGACGCGGCTGCTGGAGCCAGCGCT----GCCG----CGCCAAACCAGACGAACGGCGCGCGGCAAATGCTTTTTTTGC
ACGCGGCGCGTTGCGCTGGTGTTGGAGATGCTCTTAGGGCTGTTTGTATCGTTTGTAACCTCAACTACCTGTGTCTATCT
CGATGAAGGCCAAGCATTTTTTTTCTGTCGATACAACGCTGTGTATATTCTTGTACAACATTGTTTCATACTTTCAGTTG
GCTTTGTAAGAGCATCTCCAGCCGTTGGCACCCCCAAGAATATCACCGAACCAAAAAAGTTGGTGTCTTGGGGGTCATCC
GGCGAAATTCGGCGAAATAAAGAGGGCATCTTTCCAGTCACACCCCACCCCAAGCAAAAGTTTGTGAGGAGAATGATTAA
GTGTGCCAAGAAAAAGGACATGTGGTGAGACACGATTCGCCAAAACGTTCGCCGGCGCCCCCAAGAGACCCCCAGCGCGC
CGGGTTTCGCCTGGGTTTGCTGGCGCTATTTTGACGTCCTGGGGGGCGTTGGGGGCATGGCTGGGCCGTTTTTCGGCGAA
AAGTGTCGTCCGAGCCTAAAACCGAGCCTAAAAAGGTGTCTTGGGGAGGCTAGTGGAGATGCTCTAAAGTGGGCCTGCGT
AGGGACTCTCATCAGATTATATTTTGGTTTTGTATTTTCTGTAGCATGGGCAGCCGGGATGTTGCAAAAATAAAATGTAA
GCGAAAAGTGCAATAGTGATGAAGGTAAAAGGGTTGTACATGAGTTGGGGCAACATACTGAAAGTG
>chr1A_25
------------------------AATGGACTATGGGCGGCTGGTCGAGCTGCTGAGCATGCGGTCAAAGCACCATGTGC
TTAGGGATGGTGTGGAGCTTGGGTGGCGGCTGGCGGAGCTGCCGGAAGGAGAGGAGGTGGCGTGGAAGTCCCTTGCTGAG
TTCTGGTCGGAAACCGTCG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTTGCATCGC
CGCTTCTTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TGACGACATGGACGAGCATGCGGAGGCCATTGCCCGG----
--------------------------------------------------------------------------------
------GGCGGAG-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AGCTGATAACGCTCCTATGGGCGTTGCTT-------TACCATGTCGGGAGTGTTGA
CGATGCAACAACTGCTGCCACTCATGGTGCTGCTGATGATGTTGTTTAAGTGT-G-CTGCGTACAATTGTACGTGCGT--
--------ACTTGCTCTTCC-TTTTG--TTATGACAT-----------TGAAAGCTTTTGTGTGTCGTGCTCCCATTTTG
AACAGCATGTAAT----GATCTTTTTAGTTTTTCAAAGAGTTTATAGTTGTTACTGTGACAACGTCGACGATCATCAGTG
TCCAAGAGGAGGTTCCGTAGGGGAAAATATCTAGTGATACCAAGCTTTAGGTGATACCATGATACAAGATCCTGGCGCAG
AATGACCTAGA---------------------------------------------------------------------
------CGGCTCCTGGTCA-------------------------------------------------------------
------------------------GAGATGATCATCAGTATCGCC-----------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr6A_573
--------------------------------------------------------------------------------
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------------GAGCATCTCCAACAACCGCGTCAAAAGGCGCGTGCACGCGATAAACCGAGATTTTAGCGCGGGCGGGA
CGTTTCGGCGCGCTCCAGCGGTGGCGGGAAAGTCACGCGCGGGGGAAAAGGCGGCAGGTCGCGCGTTATTTTTGGCGCAC
CGCTTTTGGCGCGCCTATAAAATGCGGCGCTCGCCGCACGCCTATCCCACACACTTCTCTTTCTCTTTCGCTGCCACGCG
CGCCTCCACCACTTCATCGGTTGCTTCCGTTGCCATGCGCGCCACCGCTCCAGTGCCTCGCCACCGACGCGTCACCATGC
TGCCGCGCCGCCGAGAAGCTTCGGGCTACCGCGGCGTCCGCCAGCGCCCCAACGGCGGGTTCTACTCCGAGATACGGTCC
GG------CCAACTCCGGCTCGGCCTCGGCACCTTTGAGACAGCGCACGAGGCCGCCCGCGCGTACGACGTGGCGGCGTG
GCGCCTAGACAGGCCCCGCCAGTAGATGAACTTCCACGATGTCCACACGCTCCAGCAGGCGTTGGACGTCGCCCCGCCAC
CTCGTCTTCACACGGCACAAGACCATGTGGAGCATGCTGAGCGGCAGCGCCGCCTCCTCGTCGCCCATGAGGACGAGCGG
GGTCATGGCGGAGTGGCTCCAGCGCCACCCGGA-GGACATCACCTACGAGCAAGCCTACTAGGCAAGGCGCCGCGAGGAG
GAGACGCAAAGGCGCCGCGATGAGCAGTTGGACAGGCATCGGCGAAAGGCCCTGGCACTATCATAGTGCGAAATCGTTGA
GAATGGTGGTCAGACGATCTTTACGTCGGATGATGATCGTTGGGACGACATGTGGCTCAATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGACGATGACGAGGACGACGACGACT-G-GGAGTACG--CTGTAGTTGCGTAT
GTAGTTGCACTATCTAGTAG-TTTT-----------TATCTATGTCCTTGCACTATCTAGTA------------------
--------GTTTT----TATCTATCTATGCTATGGAACTATGT-------------------------------------
-----------------------AAAATATCTATGTATCGT-TTTTT-CTATCTATGAATTTTATTTATCG--TTTTATT
-AAAAAA-T-GTACGCAATGTTTAGCGCGCGCTGCATTTTAGCGCGGCCACTGGAGCTAC--GCGCGTGC----TCAATT
TTGACGCGTCTGCTTGAGCTAGCGCTGCCGGCCG----CGCCAAACCAGGCGAACGACGCACTGCAAATGTGTTTTTTGC
GCGCGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr7D_575
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------GCATCTCCAACAACCGCGCCAAAAGACGCGCGCGTG--GTAAACCGAGTTTTTAGCGCGCGCGGGA
CGTTTCGGCGCGCTCCAGCGGTGGCGGGAAAGTCGCGCGCGCGGGAAAAGGCGGCAGGTT--GCGCTATTTTTGACGCAC
CGCTTCCGGCGCGTCTATAAAATACGGCGCTCGCCACGCGCCTATTCCACACATTTCCCTTCCTCTTCCGCTGTCACGCG
CGCCTCCATCGCTTCCTCGGTTGCTTTCGCTGCCACGCGCGCCACCGCTCCAGCGCCCAGCCACCGACGCGCCACCATGC
CGCCGCGCCGCCGAGGAGCGTCGGGCTACCGCGGCGTTCGCCAGCGCCCCAACGGCGGGTTCTACGCCGAGATACGGTCC
GG------CCAACTCCGGCTCGGCCTCGGCACCTTCGAGACGGCGCACGAGGCCGCCCGCGCGTACGACGCGGCGGCGTG
GCGCCTAAGCAGGCCACGCCCGCAGGTGAACTTCCACGACGTCCACACGCTCCAGCAGGCGCTGGACGTCGCCCCGCCGC
CTCGTCTTCACACGGCACAAGACCGTGCGGAGCACGCTGAGCGGTAGCGCCGCCTCCTCGTCGCCCATGAGGACGAGCGG
AC-CATGGCGGAGTGGCGCCAGCGCCACCCGGA-GGACGTCACCTACGAGCAAGCCTACTAGGCAAGGCGCCACGAGGAG
GACACGCAAAGGCGCCGCGACGAGCGGTTGGATAGGCGTCGGCGAAAGGCTCTGGCGATATCGCAGTGCGAAATCGTTCA
AAATGGTGGGCAGTCGATCTTTTCGTCTGATGACGAACGTTGGTTGGACATGTGGATCGATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGACGATGACGATGACGACGACTACT-G-GGAGTAGG--CTGTAGTTGCGTAT
GTAGTTGCACTATCTAGTAT-TTTT-----------T-----------TGCATTATCTAGTA------------------
--------GTTTT----TATCTATCTATGCTATGAAACTATGT-------------------------------------
-----------------------AAAATATCTATGTATCGT-TTTTT--TATCTATGAATTTTATTTTATTGTTTT-ATT
-AAAAAAAT-ATACGCAATGTTTAGCGCGCGCTGCATTTTAGCGCGGCCGCTGGAGCTAC--GCACGCGC----TCAATT
TTGACGCGTCTGCTGGAGTCAGCGCT----GCCGGCCGCGTCAAACCAGGCGAACAGCGCGCGTCAAATGCGTTTTTTAC
GCGCGGTGCGTTGCGTGGCTGTTGGAGATGCTCTTAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr5D_781
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CTTCCGCTGCCACGCGT-------------------GCCACCGACGCGCCACCATGC
CGCCGCGCCGCCGAGGAGCGTCGGGCTACCGCGGCGTCCGCCAGCGCCCCAACGGCGGGTTCTACTCCGAGATACGGCCC
GG------CAAACTCCGGCTCGGCCTCGGCACCTTCCAGACGGCGCAAGAGGCCGCCCGCGCGTACGACGCGGCGGCGTG
GCGCCTAGGCAGGCCGCGCACGCAGATGAACTTCCACGACGTCCACACGCTCCAGCAGGCGCTGGACGTCGCCCCGCCGC
CTCGTCTTCGCACGGCACAAGAGCGTGCGGAGCACGCTGAGCGGCAGCGCCGTCTCCTCGTCGCCCATGAGGACGAGC-G
GGTCATGGCGGAGTGGCGCCAGCGCTACCCGGA-GGATGTCACCTACGAGCAAGCCTACTGGGCAAGGCGCCGCAAGGAG
GAGACGCAAAGGCGCCGCGATGAGCGGTTGGACAGGCGTCGGCGGAAGGCCCTGGCGTTATCGCAGTGCGACATCGTTGA
GAATGGTGGGCAGATGATCTTTACTTCTGATGATGATCGTTGGGACGACATGTGGCTAGATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGACGATGACGATGACGACAACGACT-G-GGCGTAGG--CTGTAGTTGCGTAT
GTAGTTGCACTATATAGTAG-TTTTTATCTATGTCGT-----------TGCACTATCTAGTA------------------
--------GTTTT----TATCTATCTATGTTATGGAACTGTGT-------------------------------------
-----------------------AAAATATCTATGTATCGT-TTTTT-CTATCTATGAATTTTATTTATCG--TTT-ATT
-AAAAAAAT-GTACGCAATGTTTAGCGCGCGCTGCATTTTAGCGCGGCCGCTGGAGCTAC--GCGCGCGCG--CTCAATT
TTGACACGTCTGCTGGAGGCAGCGCTACCGGCCG----CGCCAAACCAGGCAAACGGCGCGCGGCAAATGCGTTTTTTGC
GCGCGGCGCGTTGCGCGGCTGTTGGAGATGCTCT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr1D_781
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CTTCCGCTGCCACGTGCGCCACCGCTCCAGCGCCCCGCCACCGACGCGCCACCATGC
CGCCTCGCCGCCGAGGAGCGTCGGGCTACCGCGGCGTCCGCCAGCGCCCCAACGGCGGGTTCTACTCCGAGATACGGTCC
GG------CCAACTCCGGCTCGGCCTCGGCACCTTCGAGACGGCGCACGAGGCCGCCCGCGCGTACGACGCGGCGGCGTG
GCGCCTAGGCAGGCCGCGCCAGAAGATGAACTTCCACGACGTCCACACGCTCCAGCAGGCGCTGGACGTCGCCCCGCCGC
CTCGTCTTCGCACGGCACAAGACCGTGCGGAGCACGCTGAGCGGCAGCGCCGCCTCCTCGTCGCCCATGAGGACGAGC-G
GGTCATGGCGGAGTGGCGCCAGCGCCACCCGGAGGGACGTTACCTACGAGCAAGCCTACTGGGCAAGGCGCCGCGAGGAG
GAGACGCAAAGGCGCCGCGATGAGCGGTTGGACAGGCGTCGGCGGAAGGCCCTGGCGCTATCCCAGTGCGAAATCGTTGA
GAATGGTGGTCAGACGATCTTTACGTCTGATGATAATCGTCGGGAAGACATATGGCTCGATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGACGATGACGACGACC----------G-GGAGTAGG--TTGTAGTTGCGTAC
GTAGTTGCACTATCTAGTAG-TTTTTATCTATGTCGT-----------TGCACTATCTAATA------------------
--------GTTTTTATCTATCTAT----GCTATGGAACTATGT-------------------------------------
-----------------------AAAATATCTATGTATCGT-TTTTT-CTATCTATGAATTTTATTTATCG--TTTTATT
-AAAAAA-A-ATACGCAATATTTAGCGCGCGCTGCATTTTAGCGCGGCCGCTGGAGCTAC--GCGCACGTG--CTCAATT
TTGATGCGTCTGCTGGAGCCAGCACTGCCGGCCG----CGCCAAACCAGGCGAACGGCGCGCGGCAAATGCGATTTTTGC
GCGCGGCGCGTTGCGCGGCGGTTGGAGATGCTCTAAGG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr4D_781
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CTTCCGCTGCCACGCGCGCCACCGCTCCAGCGCCCCGCCACCGCCGCGCCACCATGC
CGCCGCGCCGCCGAGGAGCGTCGGGCTACCGCGGCGTCCGCCAGCGCCCCAACGGCGGGTTCTACTCCGAGATACGGTCC
GG------CCAACTCCGGCTCGGCCTCGGCACCTTCGAGACGGCGCACGAGGCCGCCCGCGTGTACGACGCAGCGGCGTG
GCGCCTAGGCAAGCCACGCCCGCAGATGAACTTCCAGGACGTGGACACGCTCCAGCAGGCGCTGGACGTCGCCCCGCCGC
CTCGTCTTACCACGGCACAAGACCGTGCGGAGCACGCTGAGCGGCAGCGCCGCCTCCTCGTCGCTCAGGAGGACGAGC-G
GGTCATGGCAGACTGGCGCCGGCGCCACCCGGA-GGACGTCACCTACGAGCAAGCCTACTGGGCAAGGCGCCGCGAGGAG
CT------------------------GTTGGATAGGCGTCAGCGGAAGGCCCTGGCGTTATCGCAGTGCGAAATCGTTGA
GAATGGTGGGCAGACGATCTTTACGTCTGATGATGATCGTTGGGAGGACATGTGGCTCGATACCTCGGACGAGACCAGCG
AGG--------------------ATGGCGATGATGATGACGACGAC------T-G-GGAGTAGG--CTGTAGTTGCGTAT
GTAGTTGCACTATCTAATAG-TTTTT--TTATGTCGT-----------TGCACTATCTAGTA------------------
--------GTTTT----TATCTAT----GCTATGGAACTATGT-------------------------------------
-----------------------AAAATATCTATGTATCGT-TTTTT-CTATCTATGAATTTTATT-ATCG--TTTTATT
AGAAAAAAT-GTATGCAATGTTTA-CGCGCGCTGCATTTTAACGCGGCCGCTGGAGCTAC--GCGCG--CG--CTCAATT
TTAACGCGGCTGTTGGAGCCAGCGCTGC---CCG----TGCCAAACCAGGCGAACGGCGCGTGGCAAATGCGTTTTTTGC
GTGCGGCGCGTTGCGCGGCTGTTGGAGATGCTCTTA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr1D_782
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TTCCGCTGCCACGCGCGCCACCGCTCCAGCGCCCCGCCACCGACGCGCCACCATGC
CGCCGCGTCGCCGAGGAGCGTCGGGCTACCACGGCGTCCGCCAGCGCCCCAACGGCGGGTTCTACTCCGAGATACGGTCC
GG------CCAACTCCGGCTCGGCCTCGGCACCTTCAAGACAGCGCACAAGGCCGCCCGCGCGTACGACGCGGCGGCGTG
GCGCCTAGGCAGGCCGCGCCAGCAGATGAACTTCCACGACGTCCACACGCTCCAACAGGCGCTGGACGTCGCCCCGTCGC
CTCGTCTTCGCACGGCACAAGACCGTGCGGAGCACGCTGAGCGGCAGCGCCGCCTCCTCGTCGCCCATGAGGACGAGC-G
GGTCATGGCGGAGTGGCGCCAGCGCCACCCGGAGG-ACGTCACCTACGAGCAAGCCTACTGGCCAAGGCGCCGCGAGGAG
GAGACGCAAAGGCGCCGCGATGAGCGATTGGACAGGCGTCGGCGGAAGGCCCTGGCGCTATCGCAGTGCGAAATCGTTGA
GAATGGTTGTCAGACGATCTTTACGTCTGATGATGATCGTTGGGAGGACATGTGGCTCGATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGACGATGACGATGACGAC------T-G-GAAGTAGG--CTGTAGTTGCGTAT
GTAGTTGCACTATCTAATAG-TTTTTGTCTATGTCGT-----------TGCACTACCTAGTA------------------
--------GTTTTTATCTATCTAT----GCTATGGAACTATGT-------------------------------------
-----------------------AAAATATTTATGTATCGT-T-TTT-CTATCTATGAATTTTATTTATCT--TTTTATT
-AAAAAA-ATGTACGCAATGTTTAGCGCGCGCTGCATTTTAGCGCGGCCGCTGAAGCTAC--GCGCG--CG--CTCAATT
TTGACGCGTCTGCTGGAGCCAGCGCTGCCGGCCG----CGCCAAACCAGGCGAACGGCGCGCGGCAAATGCTTTTTTTGC
GCGCGGCGCGTTGCACGGCTGTTGGAGATGCTCT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr5A_799
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CCACCGCTCCAGCGCCCCGCCACCGCCGCG--------C
CGCCGTGCCGCCGAGGAGCGTCCGGCTACCGCAGCGTCCGCCTACGCCCTAACGGCGGCTACTACTTGGAGATACGCTCC
GG------CGATCTTCGGCTTGGCCTCGGCACCTACAGGACTGCGCGCGAGGCCGCCTGCACGTACGACGCGGCGGCGTG
GCGCCTAGGCCGGCCGCGCGGGCAGATGAACTTCCAAGATGTGTACACGCTCCAGCAGGCGCTCGACGTCGCCCCGCCGC
CTCGTCTGAACACGGCACAAGACCGTACGGAGCACGCCGAGCGGCAGCGCCACCTCCTCGTCGCCCAGGAGGACGAGC-G
GGTCATGGCGGAGTGGGGCCGGCGCCACCCGGAGG-ACGTCGCCTACGAGC----CTACTGGGCAAGGCGTCGCGAGGAG
GATACGCGAAGGCGCCGCGAGGAGCGGTTGGACAGGTGTCGGCAGAAGGCATTGGCGAATGCGCAGCCCGATCTCGTTGC
AGCAGGTGGGAGGTCGTTTTTCACGAAAGACGATGATCGTTGGTTGGACATATGGCTAGATATCTCGGACGACATCGCCG
AGG--------------------ATGATAATGATGAT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr5D_821
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
CGCCGCGCCGCCGAGGAGCGTCGGGCTACCGCGGCGTCCGCCAGCGCCCCAACGGCGGGTTCTACTCCGAGATACGGTCC
GG------CGAACTATGGCTCGGCCTCGGCACCTTCGAGACGGCGCACGAGGCCGCCCGCGCGTACGACGCGGCGGCGTG
GCGCCTAGGCAGGCCGCGCCCGCAGATGAACTTCCACGACGTCCACACGCTCCAGCAGGCGTTGGACGTCGCCCCGCCGC
CTCGTCTTCGCACGGCACAAGACCGTGCGGAGCACGCTGAGCGGCAGCGCCGCCTCCTCGTCGCCCATGAGGACGAGC-G
GGTCATGGCGGAGTGGCGCCAACGCCACCCGGAGG-ACGTCACCTACGAGCAAGCCTACGGGGCAAGGCGCCGCGAGGAG
GAGACGCAAAGGCGCCGCGATGAGCGGTTGGAAAGGCGTCGGCGGAAGGCCCTGGCGTTATCGCAGTGCGAAATCGTTGA
GAATGGTGGGCAGACGATCTTTACGTCTGATGATGATTGTTGGGACGACATGTGGCTCGATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGATGATGATGATGACGACGACGACT-G-GGAGTAGG--CTGTAGTTGCGTAT
GTAGTTGCACTATCTAGTAG-TTTTTTTTTATGTCGT-----------TGCACTATCTAGTA------------------
--------GTTTTTATCTATCTAT----GCTACGGAACTATGT-------------------------------------
-----------------------AAAATCTCTATGTATCGTTT-TTT-CTATCTATGAATTTTATTTACCG--TTTTATT
-AAAAAA-T-ATACGCAATGTTTAGCGCGCGCTGCATTTTAGCGCGGCCGCTGGAGCTACACGCGCG--CG--CTCAATT
TTAACGCGGCTGCTGGAACCAGCGCTGCCGGCCG----CGCCAAACCAGACGAACGGCGCGCGGCAAATGCATTTTTTGC
GCGCGGCGCGTTGGGCGGCTGTTGGAGATGCTCT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr7D_821
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
CGCCGCGCCGCCGAGGAGCGTCGGGCTACCGCGGCGCCCGCCAGCGCCCCAACGACGGGTTCTACTCCGAGATACGGTCC
GG------CGAACTCCGGCTCGACCTCGGCACCTTCGAGACGGCGCACGAGGCCGCCCGCGCGTACGACGCGGCGGCGTG
GCGCCTAGGCAGGCCACGCCCGCAGATGAACTTCCACGACGTCCACACGCTCCAGCAGGCGCTGGACGTCGCCCCGCCGC
CTCGTCTTCGCACGGCACAAGACCGTGCGGAGCACGCTGAGTGGCAGCGCCGCCTCCTCGTCGCCCATGAGGACGAGC-G
GGTCATGGCGGAGTGGCGCCAGTGCCACCCGGAGG-ACGTCACCTACGAGCAAGCCTACCGGGCAAGGCGCCGCGAGGAG
GAGACGCAAAGGCGCCACGATGAGCGGTTGGACAGGCGTCGGCGGAAGGCCCTGACGTTATCGCAGTGCGAAATCGTTGA
GAATGGTGGGCAGACGATCTTTACATCTGATGATGATCGTTGGGACAACATGTGGCTCGATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGATGATGATGATGACGACGACGACT-GGG-AGTATG--CTGTAGTTGCGTAT
GTAGTTGCACTATCTAGTA---TTTTTTTTATGTCGC-----------TGCACTATCTAATA------------------
--------GTTTTTATCTATCTAT----GCTATGGAACTATGT-------------------------------------
-----------------------AAAATATATATGTATCGT-T-TTTTCTATCTATGAATTTTATTTATTG--TTTTATT
AGAAAAA-T-GTACGCAGTGTTTAGCGCGTGCTGCATTTTAGCGCGCCCGCTGGAGCTAC--ACGCG--CGCGCTCAATT
TTGACGTGGCTGCTGGAGCCAGCGCTGCCGGCCG----CGTCAAATCAGGCGAACGGCGCACGGCAAATGCATTTTTTGT
ACGCGGCGCGTTGCGCGGCTGTTGGA--TGCTCTTAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr6D_821
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
CGCCGCGCCGCCGAGGAGCGTCGGGCTACCGCGGCGTCCGCCAGCGCCCCAACGGCGGGTTCTACTCCGAGATAGGTCCA
GCCGAGGCCGAGCTCTGGCTCGGCCTCGGCACCTTCGAGACGGCGCACGAGGCCGCCCGCGCGTACGACGCGGCGGCGTG
GCGCCTAGGCAGGCCGCGCCCGCAGATAAACTTCCAGGACGTGGACACGCTCCAGCAGGCGCTGGACGTCGCCCCGCCGC
CTCGTCTTACCACGGCACAAGACCGTGCGAAGCACGCTGAGCGGCAGCGCCGCCTCCTCGTCGCCTAGGAGGACGAGC-G
GGTCATGGCGGACTGGCGCCGGCGCCATCCGGAGG-ACGTCACCTACGAGCAAGCCTACTGGGCAAGGCGCCGCGAGGAG
GAGACGCAAAGGCGCCGCGAGGAGCGGTTGGACACGCGTCGGCGGAAGGCCCTGGCGTTATCGCAGTGCGAAATCATTGA
GAATGGTGGGCAGACGATCTTTACGTCTGATGATGATCGTTGGCAGGACATGTGGCTCGATACCTCGGACCAGACCAGCG
AGG--------------------ATGGCGATGATGATGATGATGACGACGACT-G-G-AGTAGG--CTGTAGTTGCGTAT
GTAGTTGCACTATCTAGTAG--TTTTTTTTATGTCGT-----------TGCATTATCTAGTA------------------
--------GTTTTTATCTATCTAT----GGTATGGAACTATGT-------------------------------------
-----------------------AAAATATCTATGTATCAT-T-TTTTCTATCTATGAATTTTATT-ATCG--TTTTATT
AAAAAAA-T-ATACGCAATGTTTACCGCGCGCTGCATTTTAGCACGGCCGCTGGAGCTAC--GCGCG--CGCTCTCAATT
TTGACGCGGCTGCTGGAGCCAGCGCTGCCGGCCG----CGCCAAACCAGGCGAACGGCGCGCGGCAAATACGTCTTTTGC
GCGCGGCGCGTTGCACGACTGTTGGAGATGCTCTTA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr3A_821
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
CGCCGCGCCACCGAGGAGCGTCGGGCTACCGCGGTGTCCGTCAGCGCCCCAACGACGGGTTCTACTCCGAGATACGGTCC
GG------CGAACTCCGGCTCGGCTTTGGCACCTTCGAGACGACGCACGAGGCCGCCCGCGCGTACAACGCGGCGGCGTG
GCGCCTAGGAAGGCCGTGCCCGCATATGAACTTCCACGACGTCCACACGCTCCAGCAGACGCTGGGCGTCGCCCCACCGC
TTCGTCTTCGCACGGCACAAGATCGTGCGGAGCACGCTGAGCGGCAGCGCCGCCTCTTCGTCGCCCATGAGGATGAGC-G
GGTCATGGCAGAGTGGCGCCAACGCCATCCGGATG-ACGTCACCTACGAGCAAGCCTACTGGGCAAGGCGATGCGAGGAG
GAGACGCAAAGGCCCCGCGATGAGCGGTTGGACAGGCGTCAGCGGAAGGTCCTGGCGTTATCGCAGTGTGAAATCGTTGA
GAATGGTGGGCAGACGATATTTACGTCTGATGATGATTGTTGGGACGACATGTGGCTCGATACCTCGAACCAGACCAGCG
AGG--------------------ATGGCGATGATGATGATGACGACGACGACCGG-G-AGTAGG--CTGTAGCTATGTAT
GTAGTTGCAT--TCTAGTAG--TTTTTTTTATGTCAT-----------TGCACTATCTAGTA------------------
--------GTTTTTATTTATCTAT----GCTATGAAATTATGT-------------------------------------
-----------------------AAAATATCTATGTATCAT-TTTCT--TATCTATAAATTTTATTTACCG--TTTTGTT
AAAAAAA-T-ATACGCAATGTTTAGCGCGCGTTGTATTTTAGCGCCGCCGCTGAAGCTAC--ACACG--CGCTCTCAATT
TTGATGCGGCTGCTGAAGCCAGCGCTGTCGACCG----CGTCAAGCCAGGTGAACGACGCACGGCAAATGC-TTTTTTGC
GCGCGGCGCGTTGCGTGGCCGTTGGTGATGCTCTTAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>chr1A_833
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------CGAGGAGCGTCCGGCTACCGCGGCGTCCGCCTGTGCCCCAACGGCGGCTACTACTCGGAGATACGCTCT
GG------CGATCTCCGGCTCGGCCTCGGCACCTACGGGACGGCGCACGAGGCCGCCCGCGCGTACGACGCGGCGGCGTG
GCGCCTAGGCCGGCCGCGCGGCCAGACGAACTTCCAAGATGTGTACACGCTCCAGCAGGCGCTCGACGTCGCCCCGCCGC
CTCGTCTGAACATGGCACAAGACCGTGTGGAGCACGCCGAGCGGCAGCGCCGGCTCCTCGTCACCCAGGAGGACGAGC-G
GGTCATGGCAGAGTGGCGCCGGCGCCACCCGGAGG-ACGTCGCCTACGAGCAGGTCTACTGGGCAAGGCGCCACGAGGAG
GACACGCGAAGGCGCCGCGAGGCGCGGTTGGACAGGCGTCGGCGGAAGGCATTGGCGAATGCGCAGTCCGATCTCGGTGC
AGCAGGTGGGCAGTCGTTCTTCACGCCGGACGATGATCGGTGGCTGGACATCTGGCTAGATACCATGGACGACACCGCCG
AGG--------------------ATGATAATGGTGATGATGA--------------------------------------
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------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSS--S---S---------S-------------S----S--------------------
--------------------------------------------------------------------S----------S
-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS--------------S---------------S--S-----------------------S----------
------------------------S--------------------------------S--S-------------------
---------S------S----S---------S-------------S----------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------S-----------
----------------S-----------------------------------S---------------------------
--------------------------------------------------------------------------------
-------------------------------S----------S----------S--------------------------
------------------------------S------------S------------------------------------
-----------------------------------S---S----------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------S-----------
---S---------------SS-S---------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-S-------------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_300
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----------------------------------------GGGAGTGTTGACAACGCAAC--------------------
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------------------------------------------------------------------
>reverse_2341
--------------------------------------------------------------------------------
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--------------------TGGCGCTATTTTGACGTCCT----------------------------------------
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------------------------------------------------------------------
