>input_sequence_80957
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATGGTGTCCCACTTCCCCTCACTGGCCGGCCTCCTCGCC
AGCCGCCTGCTGGTTCTCTACGCCACCACGTGGTCCGCAGTCGCTGCCATGTCCATGGCTGTTACGGCTCTCGCGCCCGA
GGATCGCCTATGTCTGGGGCATCGCGTCGGGTTCGCTGCTCACCAAGGCGAGCCCAGCCAGCAAATTTGCCGGAGGCAGC
ATCAGCCTGCCACTTGACGGCTGCCGTATGTGTGGTGTGCTCGCTGTCCTCTTCGTCGGACCATGCCTGACATGGTCGTT
CCGTGCTGGCCTCTTCTGCCGGGCCGTGCCTGACATGGTCATTCCGTTCATGTTCGCTGTCGTGGTGATCACCAGCGTCG
TCGGGTTCACCGCCGCCGTGGGCGTCTGGGAGGACGACAATGAGGTAT-------TGAGGTAG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>chr3D_1_TraesCS3D01G077700
TTTAGCAGTTTGATGATGCGCCTGTTCGATGTGTGTAGCCTTGGCATGATGGATGCTTGTACTAATCTTAGAATGTATTT
TGTATGTAGCCCTGGCATAGATGCTAGTGCTGATCTAGAGTATATATTTAATTAGGTATCCTCTTTGGTCTGAGTGTTCA
TTCTGCGTGTAAATGATCCCTTGTGCCAATGACGGTGTGTCCTGCTTTTCTGGGCAACAAATCTACTGTGTTATAGTGAC
AGCTTTAGAGCTAGAACTGCCTCATGGACCTGCAAAATTGGACATGTAAAATCTACTGTGTTATAGGCGGATTTAGTTCT
TGTACCTGCACTGCAGTTTCTCTATTTGGAAACTGGAAACTGCATAGGAGCAGCTGAGCTGGGGAGGGGAGTAGATCAAA
TTTGACAATTGCAGAGTGCCACCTGCTCTGTTCTCTGACTCTCGCCAATCTTCCACCCAAACACACAAACCCCAACAACT
ACACTATACAGCAAGAAGAAACCTCTCTGCTCAATCAAGTTTACGCTCGCGAGCATGCGTGCAGATTTTCATGAAGAAAG
AAGCATTTTTGGAATGTTGTTTCTGCATGAAAATTTGCATGCATGTTCAGAATTAGTCAATGTTTGTTCCTAACGAAATT
CAGATTTTTTGGATTTTTTTATTATTTTCTTATTTT-ACTCTTCATGAGAGTGCATTTGAGCTCGCGAGCAGAAGGGTAC
TTTCGCTTATCAAGTACTCCCTCCATTTCTTTTTAGTCTGCAAATAAGATTTAGTCAAAGTCAAACTTTGTAAAATTTGA
CTAACTTTATAGAAAGAAATATCAACATTTACTATACTAAGGTTATATGTTATGATAATTAATTTCATCATGCATCTAAT
AATATTAATTTCATAGTGTGAATGTTGATATCTTTTCCTATAAAGCTCGTCAAACTTTATAAAGTTTGACTTTGACCAAA
TCTTATATACGAACTAAAAAGAAATAGAGGGAGTACCTACAATGGTGTCCCACTTCCCCTCACTGGCCGGCCTCCTCGCC
AGCCGCCTGCTGGTTCTCTACGCCACCACGTGGTCCGCAGTCGCTGCCATGTCCATGGCTGTTACGGCTCTCGCGCCCGA
GGATCGCCTATGTCTGGGGCATCGCGTCGGGTTCGCTGCTCACCAAGGCGAGCCCAGCCAGCAAATTTGCCGGAGGCAGC
ATCAGCCTGCCACTTGACGGCTGCCGTATGTGTGGTGTGCTCGCTGTCCTCTTCGTCGGACCATGCCTGACATGGTCGTT
CCGTGCTGGCCTCTTCTGCCGGGCCGTGCCTGACATGGTCATTCCGTTCATGTTCGCTGTCGTGGTGATCACCAGCGTCG
TCGGGTTCACCGCCGCCGTGGGCGTCTGGGAGGACGACAATGAGGTAT-------TGAGGTAGGACAGGTGTAGGTTATG
CCGCTACATCAGTCAAGATGTACTTTCCATTTTT-GAAATTTGTCAGCGGCAACAATGCAGAGTCAAATCTTTCTGAACT
TCTCAGCAAAAAAAAAATCTGAAAGCAGGACGACTACTGATAGCTTCAATCAATAATCCAATCTGAAACGACCGACAAAT
ATAGTTTTTTTGGCAAACAACAACCCTCAAAAGGAAGTTATAGGTAGAAGGAGATTTAGAAGAGTATGCCCTTTAGCATC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CAAGGGAATGTACAGAGATC-TAGCTCCCTCTAGGAAAAGAACTGGCCTCCAAAACCAT
TTTATAGTTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATCTAGCTCCTTTACTGCAAAGGAAGTTATAGGTAGAAGGAGATTTAGAAGAGTATACCCTTTTT
G-TAAGATTATGAGCCATCAGATTGCTAATCCTTGGAATGTGGTCAATCCTCTAAGAACCAA-GCCTAGAAACTAGATTG
AAGAAATCAGCGAATGTAGGTCTT----AAGTTGCAATGTCCTGGACTTCGTGTCGGATCCTTAGCTTTCACCGCTTCCA
GCAACGTCCTGCAATCAGATAAGAAATAGACAGAGTTCCAATTCAAGTATTTGACAGCCTCAAGCGCTAGAAGAAGTCCA
AGTGCTTCAACCTGCTAAACAGAACAAACATTCCCCCAAACAGCTTGAATAAATATGGAATGATTCCTTGATTCGTCCCT
TAAAAATACTCCGAAAGAGGCTTTATCTTGGCTAACTACAGGATTGAATGTTGCACCGA-CATATGCTAAGAAACCTGCA
TGTTGAAAATTCAGACCCCTGTCAATAGTATGTCTTTCTGATTAAATCACTGGAGAGTCTTTTATCTTCTAATTCATCCT
CCAA--TGCACCTGCATTAAGCATTGATTTGGAAGCGTATATTACCTGCATTGGATCCAAAAATTTTCTT----TTCAAA
AAGAAAATCATTTCTAGCTTTCCAAATATTGCATAAAATAGTAAGCATGAACTCTAAACTCTA
>chr3A_167
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTGTAAATGCTCTCTTGTGCCAATGTCGGTGTGTCCTGCTTTTCTGGGCAACAAATCTACTGTGTTATAGTGAG
AGCTTTAGGGCTAGAACTGCCTCATGGACCTGCAAAATTGGACATGTAAAATCTACTGTGTTATAGCCGGATGTAGTTCT
TGTACCTGCACTGCAGTTTATCTATTTGGAATCTGGAAACTGCAGAGGAGCAGCTGAGCTGGGAAGGGGAGTAGATCAAA
TTTGACAATTGCAGAGTGCCACCTGCTCTGTTCTGACTCTCTCGCCAATCTTCCACCCAAACACACAAA-CCCAACAACT
ACACTATACAGCAAGAAGAAACCTCTTTGATCAATCAAGTTTACGCTCGCGAGCACGCGTGCAGAGTTTCATGAAGAAAG
GAGCATTTTTGTAGTGTTGTTTCTGCATGAAAATTTGCATGCATGTTCAGAATTAGCCAATGTTTGTTCCCAAAGAAATT
CAGAATTTTCGGA-TTTTTTATTTTTTTCTGATTTTTACTGTTTATGAGAGTGAATCTGAGCTCGCGAGCAGAAGGGTAA
TTTCGCTGATTAAGTATTTTCTTTGTTTCTTTTTAGTATGCATATAAGATTTAGTCAAAGTCAAACTTTGTAAAATTTGA
CTAACTTTATAGAAAGAAATATTAACATCTATTATACTAAGGTTATATGTTAT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>chr3A_851
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ATGACAATTAATTTCATCATGTATCTAAT
AATATTGATTTCATAGTGTGAATGTTGATGTATTTTCCTATAAACCTAG----------TAAAGTTTGACTTTGATCAAA
TCTTATATACGAACTAAAAAGAAGAA-----AGTACCTACAATGGTGTCCCACTTCCCCTCACTGGCCGGCCTCCTCGCC
AACCGCCTGCTGGTCCTCTACGACACCACATGGTCCGCAGTCGCTGCCATGTCTGTGGCCGTTACGGCTCTCGCGCCCGA
GG-TCGCCTATGTCTGGGGCGTCGCGTCTGGTTCACCGCTCACCAAGGCGAGCCCGCCTGGCAAATTTGCCGGAGGCAGC
ATCAGCCTGCCACTTGACGGCCGTCGTATGTGTGCCTGCTTACCTCTTCG----GTCGGACCATGCCTGACGTGGTCGTT
CTGTGCTGGCCTCT-CTGTCGGGTCATGTCTGACGTGGTCATTCCGTTCATGTTCACTGTCATGGTGATCACCAGCGTCG
TCGGGTTCACCGCC-----GGGCGTCTGGGAGGACGACAATGAGGAGGAGAACACTGAGGTAGGACATGTGTAGGGTATG
CTGCTACATCAGTCAAGATGTACTTTCTAGTTTTTGAAATTTGTCAGCGGCAACAATGCAAAGTCAAATCTTTCTGTACT
TCTTAGCAACCAAAATATCTGAAAGCAGGATGACTACTGC--GCTTCAATCAATAATCCAATCGGAAACGACCGACAAAT
ATACTTTTTTTGGCAAACAACAACCCTCGAAAGAGGGTTCCAGATATTA-----------------------TTAGCATC
CAAGGCAATGTACAGAGGAGGACGTGGGCATAGCCCAGTGGTTGGGGGCGCATGATTGTAAACCTAACGACCAGAGTTCG
ATCCACGTCGGGGACGAATTTCTGGAATTCTCATGAGGGATGCTTCTTCTATATCAAGAAAACCGTGGGTGCTAGTGCCC
ATGGAGTTTCATTTTTTTTTTCAAGGCAATGTACAGAGATC-TAGTTCCCTCTAGGAAAAGAAATGGCCTCCAACGCCAT
TTTATAGTTACAATTGTTGAGGAAATCGTTAACTGATAGCTGCTCGGTCGGCTGGTGAGTAGAGGATTAATAGGCTAATT
GGCAAGTTAATCAGCCATTTAATCAATTAATCGGAAACCTCTCCGAAGAGTCCCCCTCCTCCCGCGACGCTCCCGCGAGC
GTCCGGGAGGAAACCCTAGCGCCGCCGCCTCTCCTCCCCTCCTCCTCTCCCCCCCCCTCGCCGCCGCCGAGGGGCGCGAG
CGGGCGAAGCCCGGTCGTCGCCGGCGGCGGCGGGGCCCCCTCATCTCCTCGCGCGGGGATCTCGGCGCGGGCCGGATCTC
GCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGCGGCTGCGTGATGGGCGGCAAGGCGCGTGGTGGTGCAGGCCGGCGGGCGGGTTTCGGCGGCGGTTGC
TTCTCGGCAGCTCCGGCGAGCCTCCCCTGGCGCTGCGGGTCGTGTGCGACCGGGTCGCGGGCGGCCCCTCTCGCCGCGGC
TCTCTGGTGGAGGGGCGGCGCGGCAGCGGTGGTGGTGGGCGCCCCCGTCCAGTCGGGCCCTTGCGGCTGGACGGCGGAGC
TCGGCGCGGGAAGACCCCCCTGATGGCCTCCCATTTCTGCGGCGGCGGCATATCTGCCATCTCATCCGTCTTCCTCGACA
TCGGGTGGCGGTGGCTGCTCTCCGGCGGGTCCGGCCCTTCGGCTTAGGGGGCGAAACAGGTGGTTTCGGGGGGGAGGCTG
GTTGGGGGATGAGCGTCTTTGGCCATTGGCCATTCCCCCACCTCCCCCTTCCCTCGGGCAGCGTCATGTCGCGGTTCGTC
TCGAGGCAGCGCCCGCCGGCGACTCCAGGAGGCGGTTGGGGGCGTGGATCTGGTCAAAGTCGTGTCCTTTGGGAGTTCTC
GCGGTGGTCTGGTGGCAGGGCGGCGGCCCTGCCGGTGGGAGACGCAGCGGTTGTGGACGGACTGCGCGGCTCGGATGCGG
GCGGGCATCTATGGCCACTCGGGTGGCTTAGCTGCGGGTGGCTGTCGGACCGGGGAGGCGACGGAAGAGTTGAAGCACCG
GAGTACATCACTTGCCCAGTACGCGCTCTGGCCGACGATGATGGCGTCCGCGGACGTCGTGTTCCTCCCTGTAGGCTTCG
TCGTGGTGCTCCTTCTCCTTCCTTCTAGCCCCGGGTGAAAGCTTGATCTTCGGATCGGACGGTGGCGACATTCCGTGGTC
GTACCCCTTCTTGGAGGCATCGTCTTGGAGCCCTCGGTCCGGCGTGGTCCGTCACACTTCTTCCCGGTTCATCGGGCATT
CTGTGGGTGCGTGGTAGTCGTTGAGGGTGTGTGTCGGTGCCCGGCATCCTTGTATCTCGTCTTGGGTGTGTGTGGTGTGC
GTTTGTATCGATGGCTTGGTTGTGGATGTTGGTTGCTTTATAATCTAAAGCGGGGGGAAACCCTTTTTCGGAATCAATTA
ATCGGACGATTTATCGGGTAATCGGCTACTTGGGGACCCTATGAGTAGGGATTAATCGGCAAGTTAACTGGTTAATCAAA
TGGATTCTTGAACAGATCTAGCTCCTTTACTGCAAACGAAGTTATAGGTAGAAGGAGATTTAGAAGAGTATACCTTTTTT
T-TAAGATTATGAGCCCTCAAATTGTTAATCCTTGGAATGTGGTCAATCCTCTAAGAACCAA-GCCCAGAAACCAGATTG
AAGAAATCAGCGAGAGTAGGTCTT----AAGTTCCAATGTCCTGGATTTCGTATTAGATCCTTAGCTTTCGCCTCTTCGA
CCAATATCCTGCAATCAGATAAGAAATAGACAGAGTTCCAATTCAAGTATTTGACAGCCTCAGCCGCTAGAAGAAGTCCA
AGTGCTTCAACCTGCAAAACAGAACAAACAGTCCTAGAAACAGCTTGAATAAATAAGGAATGATTCCTTGTTTCGTCCCT
TAGAAATACTCTGAAAGAGGCTTTATCTTGGCTAACTACAGGATTGAATGCTGCATCGA-CATATGCCACGAAACCTGCA
TGTTGAAAATTCAGACACCTATCAATATTATCGCTTTTTGATTCCAACATTGGAGAGTCTTTTATCTTCTAATTCATCCT
CCAA--TGCACCTGCATTAAGCACTGATTTGTAAGCGTATATTACTTGCATTGGATCCC-AATTTTTCTT----TTCAAA
AAGAATATCATTTCTAGCTTTCCAAATATTCCATAAAGTAGTAAAGATGAACTCTAAACT---
>chr2A_1664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTAGCATC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CAAGACAATGTACAGCGATC-AAGTTCCCTCTAGGAAAAGAAATGGCCTCAAGAGCCAT
TTTTTAGTCAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATCCTGCTCCTTTACTGCAAAGAAAGCTATAACTAGAAGGAGATTTAGAAAAATATGCCCTTTTT
G-CAAGATTATGAGCAATCAGATTGTTGATCCTTGGAATGTGCTCAATCCTGTAACAAGCAA-GACCAGAAACAAGATTG
AAGAAATCAGCAAGAGTGGGTCGT----AAGTTCCAGTGTCCAGGATTTTGAATCAGATCCTTTGCTTTCACCGCCTCCA
CTGATGTCCTGCGGTCAGATAGGAAATAGACAGAGCTCCAATTCAAATACTTGACAGTTTCAGCCGCCAGAAGAAGCCCA
AGTGCTTCAGCCTGCTGAACAAAACAAACATTCCTAGCAATAACTTGAATAAATATGGAATGATTCCTTGATTCGTCCCG
TAGAAATACTCCGAAAGATGCTTTATCTTGGCTAACTATAGGATTGTATGTAGCATCAA-TATATGCTATGAAACATGCA
TGATGAAAATTCAGCTTCCTGTCAATATCATTGCTATTGGCTTCCATATTAGCAATC-CTCTTATCTTCCAACTCATCCT
CCAATATGCACCTGCATTAAGCATCGATTTGGTAGCGTATATAACCAAAATTGGACTCC-AATTTTTCTT----ATTCAA
TAGAAGATCACTTCTAGCTTTCCAAATATTCCACAAAGTAGTAAAGATGATCTCT--------
>chr2A_1664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTAGCATC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CAAGACAATGTACAGCGATC-AAGTTCCCTCTAGGAAAAGAAATGGCCTCAAGAGCCAT
TTTTTAGTCAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATCCTGCTCCTTTACTGCAAAGAAAGCTATAACTAGAAGGAGATTTAGAAAAATATGCCCTTTTT
G-CAAGATTATGAGCAATCAGATTGTTGATCCTTGGAATGTGCTCAATCCTGTAACAAGCAA-GACCAGAAACCAGATTG
AAGAAATCAGCAAGAGTGGGTCGT----AAGTTCCAGTGTCCAGGATTTTGAATCAGATCCTTTGCTTTCACTGCCTCCA
CTCATGTCCTGCGATCAGATAGGAAATAGACAGAGCTCCAATTCAAATACTTGACAGTTTCAGCCGCCAGAAGAAGCCCA
AGTGCTTCAGCCTGCTGAACAAAACAAACATTCCTAGCAATAACTTGAATAAATATGGAATGATTCCTTGATTCGTCCCG
TAGAAATACTCCGAAAGATGCTTTATCTTGGCTAACTATAGGATTGTATGTAGCATCAA-TATATGCTATGAAACATGCA
TGATGAAAATTCAGCTTCTTGTCAATATCATTGCTATTGGCTTCCATATTAGCAATC-CTCTTATCTTCCAACTCATCCT
CCAATATGCACCTGCATTAAGCATCGATTTGGTAGCGTATATAACCAAAATTGGACTCC-AATTTTTCTT----ATTCAA
TAGAAGATCACTTCTAGCTTTCCAAATATTCCACAAAGTAGTAAAGATGATCTCT--------
>chr6B_1664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTAGCATC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CAAGGCAATGTACAGAGATC-AAGTTCCCTCTAGGAAAAGAAATGGCCTCAAGAGCCAT
TTTGTAGTTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATCTTGCCCCTTTACCGCAAAGAAAGCTATAACTAGAAGGAGATTTAGAAAAGTAAGCCTTTTTT
A-CAAGATTATGAGCCATCAGATTGTTGATCCTTGGAATGTGCTCAATCCTGTAACAAGCAA-GACCAGAAACCAGATTG
AAGAAATCAGCAAGAGTAGGTCGT----AAGTTCCAGTGTCCTGGATTTCGAATCAGATCCTTTGCTTTCACCGCCTTCA
CTAAAATCCTGCAATCAGATAAGAAATAGACAGGGCTCCAATTCAAATATTTGACAGATTCAGCCGCCAAAAGAAGCCCA
AGTGCTTCAGCTTGCAGAACGGAACAAACATCTCTAGCAACAACTTGAATAAATATGGAATGATTCCTTGATTCGTCCCT
TAGAAATACTCCAAAAGAGGCATTATCTTGGCTAACAATAGGATTGTATGCAGCATC-AATATATGCTAAGAAACTTGCG
TGATGAAAATCCAGCTCCCTGCCAGTAGCATTGCTATTGGCCTCCATATTAGCAATC-CTCTTATTTTCCAACTCATCCT
CCAG--TGCATCTCCATTAAGCATTGATTTGGTAGCGTATATAACCTGCATTGGACTCC-AATTTTTCTTATTAATTAAA
TAGAAGATCACTTCTGGCTTTCCAAATATTCCATAAAGTAGTAAAGATGATCTCT--------
>chr7A_1664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTAGCATC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CAAGGCAATGTACAGAGATTTAAGTTCCCTCTAGGAAAAGAAATGGCCTCAAGAGCCAT
TTTGTAGTTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATCTTGGTCCTTTACTGCAAAGAAAGCTATAACTAGAAGGAGATTTAGAAAAGTATGCCTTTTTT
TACAAGATTATGAACCATCGGATTGTTGATTCTTGGAATGTGCTCAATCCTGTAACAAGCAAAGACCAGAAAGCAGATTG
AAGTAATCAGCAAGAGTAGGTCA----TAAGTTCCAATGT-CTGGATTTCAAATCAGATCCTTTGCTTTCACCACCTCCA
CTAAAGCCCTGCAATCAGATAGGAAATAGACAGAGCTCCAATTCAAATATTTGACAATTTCGGCCGCCAGAAGAAGCCCA
AGTGCTTCAGCCTGCAGAATAGAACAAACATTCCTAGCAACACCTTGAATAAATATGGAATGATTCCTTGATTCGTCCCT
TAGAAATACTCCAAAAGATGCTTTATCTTGGCTAACTATAGGATCGTATGCATCATC-A-TACATGCTAAGAAACCTACA
TGATGAAAATTCAGCTCCCTGTCAATATCATTGCTATTGGCTTCCATAATAGCAATC-CTCTTGTCTTCCAACTCATCCT
CCAA--TGCACCTGCATTAAGCATTGATTCGGTAGCGTATATAACCTGCATTGGACTCC-ATTTTTTCTT----ATTAAA
TAGAAGATCACTTCTAGTTTTCCAAATATTCCACAAAGTAGTAAGATG---------------
>chr2D_1664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTAGCATC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CAAGAGAATGTACAGAGATC-AAGTTCCCTCTAGGAAAAGAAATGGCCTCAAGAGCCAT
TTTGTAGTTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATCTTGCTCATTTACTGCAAAGAAAGCTATATCTAGAAGGAGATTTAGAACAGTATGCCTTTTTT
G-CGAGATTATGAGCCATCATATTGTTGATCCTTGGAATGTGCCAAGTCCTATAACAAGCA-AGACCGGAAACCAGATTA
AAGAAATCAGCAAGAGTAGGTCGTAATTAAGTTCCAGTGTCCTGGATTTTGAATCAGATCCTTTGCTTCCACCGCCTCCA
CTAAAGTCCTGCAATCAGATAGGAAATAGACAGAGCTCCAATTCAAATATTTGACAGTTGCAACCACCAGAAGAAGACCA
AGTGCTTCAGCCTACAGAACAGAACAAACATTCCTAGCAATAAC-----------TGGAATGATTCCTTGATTCGTCCCT
TAGAAATACTCCGAAAGGGGCTTTATCTTGACTAACTATAGGATTGTATGCAACATC-AATATATGCTAAGAAACCTGCA
TGATGAAAATTTAGCTCCCTGTCAATAGCATTGCTATTGCCTTCCATATTAGCAATC-CTCTTATCTTCCAACTCATCCT
CCAA--TGCACCTGCATTAAGCATTGATTTGGTAGCGTATATAACCTGCATCGGACTCC-AATTTTCCTT----ATTAAA
TAGAAGATCACTTCTGGCTTTACAAACATTC-ATAAAGTAGTACAGATGATCTCTGAACT---
>chr2B_1664
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTAGCATC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CAAGGCATT-TACAGAGATC-AGGTTCCCTCTAGGAAAAGAAATGGCCTCAAGAGACAT
TTTATTGTTAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATCTTGCTCCTTTACTGCAAAGAAAGCTATA-CTAGAAGGAGGTTTAGAAAAGTATGCCTTTTTT
GGCAAGATTATGAGCCATCAGGTTGTTGATCCTTGGAATGTGCTCAATCCTGTAAGAAGCAA-GACCAGAGACCAGATTG
AAGAAATCAGCAAGAGTAGGTCA----TAAGTTCTAGTGTCCTAGACTTCGAATCAGATCCTTTACTTTCACCGTCTCCA
CTAAAGTCCTGCAG--AGATAGGAAATAGACAGAGCTCCAATTCAAATATTTGACTGTTTCAACTGCCAGAAGAAGCCCA
AGTGCTTCAGCCTACAGAACAGAACAAACATTCCTAGCAATAAC-----------TGGAATGATTCCTTGATTCTTCCCT
TAGAAATACT-------------TATCTTGACTAACTATAGGATTGTATGCAGCATC-GATATATGCTAAGAAACCTGCA
TGATGAAAATTCAGCTCCCTGTCAATA-CATTGCTATTGCCTTCCATATTAGCAATC-CTCTTATCTTTCAACTCATCCT
CCAA--TGCACCTGCATTAAGCATTGATTTGGCTGATTATATAACTTGCATTGGACTCC-AGTTTTTCTT----ATTAAA
TAGGAGATCACTTATGGCTTTCCAAATATTC-ATAAAGTAGTAAAGATGATCTCTAAACT---
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS---------S--S------------S-----------------------------------------------S
--------S---------------------------------------------------------S-----S-------
-------------------S-----------S------------S------------------S----------------
----------------------------------SSSS-------------------------------S----------
--------------------------S--S-------------------------S---------S--------------
S----------S-S------------------------------------------S-------------S--S------
----S----S---S---------S------S---------S--S---------S--S----------------------S
-------S--S-----S-SS--SSS------------S----S-------------------------------------
----------------------S-----S--S-----------------------S----------------S-------
------S----------------------S-S------------S--S-SSSSSSSSSS----------------S----
-----------------------SS-SSSSS-------------------------------------------------
-S------------S-------S------S-----------------------SS----S--------------------
--S-----------------S-------S-----S-S------------------SS-SS--------------------
---------------------S-S----------SSSSSS-SS--S-S-SSSSS-----------------S--------
-S------------S---S----S-S--S-----S--------------------S-----S------------------
--------------SSSSS--------------------------SSS-------------------S-------S----
-S-------------------------S-S------------------------------S---------------S---
---S-----SS----S--------------S--------SSS---------------------S----------------
---S------------------------S----SSS---SS--S--SS-SSSSSSSSSSSSSSSSSSSSSSS--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S-----------------S-----------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S----------------------------------------S------S------
-------------SS------------------S------------------S--S------------------------
S---S----------------------------------------------------------S----------------
----------------------------------SSS-------------------------------------------
--S----------------------------------------------------S------------------------
-------------------------------SS----S-----SS----S------------------------------
----------------------------------------------------------SS--S-----------------
-----S------------------------S------S-------S--------------SSS
>forward_30
----------TGATGATGCGCCTGTTCGAT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_1304
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CCGTGCCTGACATGGTCATT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_31
-----------GATGATGCGCCTGTTCGATG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_3954
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---------------------------------GCAATGTCCTGGACTTCGTG---------------------------
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---------------------------------------------------------------
