>input_sequence_80954
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---------ATGGCGAAGAACCACGGAGCCGCTGCTCTCCTGATCGCGTCCCTGCTCGTGGTGGCCGTCGCCCTCGCCGA
CGCCAGGTTCACCGCGACGCAGATGCAGCGCGGCAGCATTAACGGAGGTACGTCCACGTCAACCGGTCAACATCGTCGTC
CATGATC------------------------TGGCCAAATGTGCTGGAC-------TTGTAACCCTTTGGACGTGTGCCT
GCCTGTCTGTGCGTTTCGCAGTTTATGCATTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGGTGAGCGCGGTG
CAGACGGGTGAGACCTGCTCCTCCCTCGCGGAGAGTGCCGGTCTGACCCAGGAGGACTTCCTGGGCTTCAACCCCAACAT
CAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCGTCCTCTGCCTAA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3A_1_TraesCS3A01G314900
TGAAGGTGGTGGATCATCTTCAACAGGAGGCACTCGTTCTAGGTGGCGAGGTTGCGTACACCGACACCACCCTCCGACTT
GGCACGACACATCCGCTCCCACACCACGAGGCATTGGGCGCCCGAGCCCCGAGGCTCTTTTAGCCACGTTCTAGAGGAAG
GCACGACGTAGGGCGTCCAGCTCACGGAACAGAGCCGACGGCAGGAGCAGAGCCGCCATGGCGTAGGTGGGAAGGGCGTC
GAGGACGGCCTTAAGAAGGACGAGGCGCCCCGCCGGCGAGAGAAGGCGCGCAGCCCATCCTGCGATACTGATCTACACTG
ATCACAATGATCGAGAGTGATAGACAACAATCGCATTTCACACCTTCTTTTTCTTAAAAAAATAAAG-AAAAATCTCTCT
GATCTGTGTACAGGTTGCGTAGTCGTGTCATGCCGTAATATTTCCGCTACTCAGACACCGCAGTCCTCTTTTCTTTTCCT
TTTTGCGGGTTGACTGCAGTCCTCTCTGATCCTACTGTCCTCATCTCTCTGCTTTGCTGCGATCGATTCGTTCTTGTTTC
TCCACTGTCATTGCGCTATCACCAACATGGAGCAAGACAGTTTTTC------------AAACAAAAAAAAGTGAGCAGTG
TGAGTGTAAAGTATTAG-GCCCGGTCAAAATCACATGGCGGTCGAAGAATATTACAGTAGTACAAAGCAGTTCCATAGGA
ATCACAGATGGGATTACCCC-GAGGCCCACCCTG----TGTTATGAACGACATGTCCATCCATGCCGTTCTCAGCATAAG
CAGCATCGCCCGTGCGTCGGACGCCGTCTCCAAGGCCATGGCCGGATTCTCTTCGTCACACT----CTCCACCCTATCGA
CTTTCGAGTGTCGAGC-------TCGTTATGCTATAAAAAGGGCGAGGGCTAAGCT--CTCTCAT--------CACCACC
ACCAAAGCAGAGCCTGACGAGCACCTATCATCCGCTTATA--CATATATCCTTTCTTCGCGTCGGCAGCATCTGCATCTG
C-------AATGGCGAAGAACCACGGAGCCGCTGCTCTCCTGATCGCGTCCCTGCTCGTGGTGGCCGTCGCCCTCGCCGA
CGCCAGGTTCACCGCGACGCAGATGCAGCGCGGCAGCATTAACGGAGGTACGTCCACGTCAACCGGTCAACATCGTCGTC
CATGATC------------------------TGGCCAAATGTGCTGGAC-------TTGTAACCCTTTGGACGTGTGCCT
GCCTGTCTGTGCGTTTCGCAGTTTATGCATTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGGTGAGCGCGGTG
CAGACGGGTGAGACCTGCTCCTCCCTCGCGGAGAGTGCCGGTCTGACCCAGGAGGACTTCCTGGGCTTCAACCCCAACAT
CAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCGTCCTCTGCCTAATACGCCGTT-----GGAT----
---GTACGTG----CGCAGCGTCGTTAAGTTGCTGCTATTTATGCATGAATAAAGGAGGCTAAGTCGCTCTGACGCTCCT
CAATGTGCCT---CCGCCATTATTCGAGTTGAGTGTGGTATTTTTACTTCCCTCACAAAAGGATC--------GAGGTTG
TAGTCC------GTCACTCTGTCTTTGTGCCAGCTTTGGCTTAAAAACCGGTTCAGTTAGTTTAAGCCTGATTACACCAG
---TGCGTTTACCTTGTGTCTCTCTTTACTTGGTTGTTCCTGATTGCCACTGCGTTACTTGGTGTGTCGCTTTAAGTAAA
CTAGACGATACCCCGCGCATTGCTGCGGAAATTGCTTGCACTATATTTTAGTAAGATTAGCAAAAGAGCCCGTGCGTTGC
AACGGGAGAGAAAATAACACATGCTTTTAACCCAATAACCATGACTCAAGACCCTAATTGGTCCACGTCCTTTA------
-------------------------CGGTGGCCTGGGCACTCACACAACGAAAACACATTTGAATGTGGTCAGTCCTAAG
ACGTC---CTCTCTCTCT--------------------------------------CTCTCTCTCAAAAAGATAAGAAAT
ATGTTGTTTTCCCCCGCGAGGTTTCTCAGAGGTGTGCATGCGTGGTTATTGATGTTTCCTTTCCTCTCAATATGGTTTTA
ATAGGTGTTTATTTGTAATTTGGATCGCCGCCAGTACGAACGAAAAACGGACTGTGCACTATATATTAAGTTTGCACCAA
AAATAACATTTTAAAAATATTTAACAGCTAACAATAATATCATATTTAGATTGTACACATTTTTCTAATCAAATTTCATA
TATAACATGTTAAAACCGGAGTTACTATTTAAAATACATGAATAATTTTGTT--------GCTGCTGATTGATTAACCGA
AAAGTCAAA-GATTTTCTGAGAAAATGCAAAAAAAGAGTTCGACTATGATTTAAACATGTACTGTGGATTAATTTACAGA
AAACAATGGGGATTTTTTTTAAATGGCACGACGGTGAACCGACATAAGCACTCCG
>chr3B_297
ATACTGGAG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ACTGAACTACACTG
ACCACACGGATCGAGAGTGATAGATAACAATCGCATTTCACCCCTTCTTTTTCTCAAAAAAAAAAATAAAAAAAATCTGT
TATCTGTTTACAGGTTGCGCAGTCGTGTCATGCCGTAAAATTTCGCCAACTCAGATT--GCAGTCCTCTTTTCTTTTCCT
TTTTGCCGGTTGACTGCAGTCCTCTCTGATGCTAGTGTCCTCCTCTCTCTCTC---CTGCGATCGATTCCTTCTTGTTTC
TCCACTGTCACTGCGGTACCACCAACATGGAGCAAGACAGTTTCAAACA----GAAAAAG----------GTGAGCAACG
TGAGTGTAAAATATTG-TGCCCGGTCAAAATCACACGGCGGTCGAAGAATATTACAGTAGTACAAAGCAGTTCCATAGGA
ATCACAGATGGTATTACCCCAGGG-CCCGGCCTGCAAATGTTAGGAACGACATGT----CCATGCCGTTCTCAGCATAAG
CAGTATCGCCCGTGCGTCGGACGCCGTCTCCAAGGCCATGGCCGGAATCTTTTCGTCACACC----CTCCATCTTATCGA
CTTTCGAGTGTCGAGC-------TCGTTACGCTATAAAAAGGGCGTGGGCTAAGCT--TTCTCAT--------CACCACC
---AAAGCAGAGCCTGACGAGCACCTACTATCCACTTATA--CAT----CCCTCCTCCTCGTCGGCAGCATCTGCATCTG
C-------AATGGCC---AACCACGGAGCCGCCGCTCTCCTGATCGCGTCCCTGCTCGTGGTTGCGGTCACCCTCGCCGA
CGCCAGGATCACCGG---GCAGCTGCAGCGCGGCAGCATTAACGGAGGTACGTCCGCGTCAACCGATCAACA---TCGTC
CATGATC------------------------TGGCCAAATGTGCTGGATTGTAAGTTTGTAACCCTTTGGACGTGTGCCT
G----TCTGTGCGTTTCGCAGTTTATGCATTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGGTGAGCGCGGTG
CAGACGGGCGAGACCTGCTCCTCCCTCGCGGAGAGCGCCGGCCTCAGCCAGGAGGACTTCCTGGGCTTCAACCCCAACAT
CAACTGTGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCATCCTCTGCCTAACGCGCCGTT-----GGAT----
---GTACGTG----CGCATCATCGTCAAGTTGCTGCTACTTATGTATGAATAAAGGAGGCTAAGTCGCTCTGACGCTCTT
CAGTGTGCCT---CCGCCATTATTCGAGTTGAATTTGGTATTTGTACTTCCCTCGCAAAAGGATC--------GAGGTTG
TAGTCC------GTCAATCTGTCTTTGTGCCAGCTTTGGCTTAAAAACCGGTTCAGTTAGTTTAAGCTTGATTACACCAG
---TGCGTTTACCTTGTGTCTCTCTTTCCTTGGTTGTTCCTGATTGCCACTGCGTTACTTGGTGTGTCGCTTTCCGTAAA
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3B_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------CTCTCTGATCCTACTGTCCTC-----TCTCCTTTGTTACGGTCGATTCCTTCTTGCTTC
TCCACTGTCACTGCGCTACCACCAACATGGAGCAAGACAGTTTTTTATTAAACAAAAAAG----------GTGAGCAACG
TGAGTGTAAAATACCA-TGCCCGGTCAAAATCACACGGCGGCCGAAGAATATTACAG---TACAAAGCAGTTCCATAGGA
ATCACAGACGGGATTACCCCCGAG-CCCGGCCTGTAAATGTTAGGAATGACATGT----CCATACCGTTCTCAGCATAAG
CAGTGTCGCCCGTACATTGGACGCCGTCTCCAAGGACATGGCCGGAATCT------------------CCACCCTATCGA
CTTTCGAGTGTCGAGC-------TCATTACGCTATAAAAAGGGCGAGGGCTAAGCT--TTCTCAT--------CACCACC
---AAAGCAGAGCCTGACGAGCACCTACTATCCACTTATA--CAT----CCCTCCTCCTCGTCGGCAGCATCTGCATCTG
C-------AATGGCC---AACCACGGAGCCGCCGCTCTCCTGATCGCGTCCCTGCTCGTGGTGGCGGTCACCCTCGCCGA
CGCCAAGATCACGGG---GCAGCTGCAGCGCGGCAGCATTAACGGAGGTACGTCCGCGTCAACCGATCAACA---TCGTC
CATGATC------------------------TGGCCAAATGTGCTGGATTGTA--------ACCCTTTGGACGTGTGCCT
G----TCTGTGCGTTTCGCAGTTTATGCATTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGGTGAGCGCGGTG
CAGACGGGCGAGACCTGCTCCTCCCTCGCGGAGAGCGCCGGCCTCAGCCAGGAGGACTTCCTGGGCTTCAACCCCAACAT
CAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCGTCCTCTGCCTAACACGCCGTT-----GGAT----
---GTGCGTG----CGCAGCATCGTTAAGTTGCTGGTACTTATGCATGAATAAAGGAGGCTAAGTCGCTCTGACGCTCTT
CCGCATATGCCTCCCGCCATTATTCGAGTTGAGTTTACTATTTGTACTTCCCTCGCAAAAGGATCGAGGATTCGAGGTTG
TAGTCC------GTCACTCTGTCTTTGTGCCAGCTTTGGATTTAAAACTGGTTCAGTTGGTT------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr3A_522
ATCTCTTTTT----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------TTTTCTGCGATCAATTCGTTCTTGTTTC
TCCACTATCACTGCGCTACCACCAACATGGAGCAAGACAGTTTTTC------------AA----------GTGAGCAACG
TGAGGGTAAAATATTAG-GCCCGGTCAAAATCAAACGGCGGTCGAAGAATATTACAG---TACGAAGCAGTTCCATAGGA
ATCACAGACGGGATTACCCC-GGG-CCCGGCCTGTAAATGTTAGGAACGACATGT----CCATGCCGTTCTCAGCATAAG
CAGTATCGCCCGTACATTGGACGCCGTCTCCAAGGCCATGACCGGAACCATGGCGTCACACT----CTCCATCCTATCGA
CCTTCAAGTGTCGAGCTC----GTCGTTACGCTATAAAAAGGGCGAGGGCTAAGCT--T-CTCTT--------CACAACC
---AAAGCAGAGACTAACAAAGCAC--CTATCAGCTTACCCTCAT----CCTTCCTTCGCGTCGGCGGCATCTGCATCTG
C-------AATGGCC---AACCACGGAGCCGCCGCTCTCCTGATCGCGTCCCTGCTCGTGGCGGCGGTCGCCCTCGCCGA
CGCCAGGGTCACCGCGATGCAGCTGCAGCGCGGCAGCCTTAACGGAGGTACGTCAAC------CGATCAACA---TCGTC
CATGATC------------------------TGCCCAAATGTGCTGGATTGTA--------ACCCTTTGGACGTGTGCCT
GACTGTGTGTGCGTTTCGCAGTTTATGCACTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGGTGAGCGCGGTG
CAACAGGGCGAGACTTGCTCCTCACTAGCGGAGGACGCCGGTCTGACCCAGGAGGACTTCCTGGGCTTCAACCCCAACAT
CAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCGTCCTCTGCCTAACACGCCGTT-----GGAT----
---GCACGTG----CGCAGCATCGTTA-GTTGCCGCTACTAC-TTATGAATAAAGGAGGCTAAGTCGCTCTGACGCTCTT
CAGTGTGCCT---CCGCCATTATTCGAGTTGAATTTGGTATTTGTACTTCCCTCGCAAAAGGATC--------GAGGTTG
TAGTCC------GTCACTCTGTCTTTGTGCCAGCTTTGGCTTCAAAATTGGTTCAGTTGGTTTAAGCTTGATTACACCAG
---TGCGTTTACCTCGTGCGTCTCTTTCCTTGGTTGTTCCTGATT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3D_546
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TTCGTTCTTGTTTC
TCCACTGTCACTGCGCTACCACCAACATGGAGCAAGACAGTTTTCAG--AAAAAAGAAAA----------GTGAGCAACG
TGAGTGTAAAATATTAG-GCCCGGTCGAAATCACACGGCGGTCGAAGAATATTACAG---TACAAAGCAGTTCCATAGGA
ATCACAGACGGGATTACCCCCGGG-CCCGGCCTGTAAATGTTAGGAACGACATGT----CCATACCGTTCTCAGCATAAG
CAGTATCGCCCGTGCATTGGACGCCGTCTCCAAGGCCATGGCCGGAACCATGTCGTCACACT----CT----CCTATCGA
CTTTCGACTGTCGAGCTC-----TCGTTACGCTATAAAAAGGGCCGAGGACCAAGCTAT-CTCAT--------CACCACC
---GAAGCAGAGCCTGACGAGCACCTACTATCCGCTTATA--CAT----CCTTCCTTCTCGTCGGCAGCATCTGCATCTG
C-------AATGGCC---AACCACGGAGCCGCCGCTCTCCTGATCGCGTCCCTGCTCGTGGCGGCGGTCGCCCTCGCCGA
CGCCAGGGTCACCGCGATGCAGCTGCAGCGCGGCAGCATTAACGGAGGTACGTCCACGTCAACCGATCAACA---TCGTC
CATGACC------------------------TGGCCAAATGTGCTGGATTGTA--------ACCCTTTGGACGTGTGC--
------------GTTTCGCAGTTTATGCGTTGAC---GAAGGCGGTGCCGGCGCTGACGTGCAACAAGGTGAGCGCGGTG
CAGACGGGCGAGACCTGCTCCTCCCTCGCGGAGAGCGCCGGCCTGAGCCAGGAGGACTTCCTGGGCTTCAACCCCAACAT
CAACTGCGTCAGGATCTTCGTTGGCCAGTGGGTCTGCCTCGACGCATCCTCTGCCTAACACGCCGTT-----GGATCATG
GATGTGCGTG----CGCAGCATCGTTAAGTTGCTGCTACTTATTTATGAATAAAGGAGGCTAAGTCGTTCTGACGCTCTT
CAGTGTGCCT---CCGCCATTATTCGAGTTGAATTTGGTATTTGTACTTCCCTCGCAAAAGGATC--------GAGGTTG
TAGTCC------GTCACTCTGTCTTTGTGCCAACTTTGGCTTAAAAATTGGTTGAGTTGGTTTAAGCTTGATTACCAGTG
TGTTGCGTTTACCTTGTGTGTCTCTTTCCTTG-TTGTTGCTGATTGCCACTGAGTTA-----------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr3D_586
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------ATAGAGCAAGACAGTTTTTCTCA----AGAAAAA----------GCGAGAAACG
TGAAGCTAAAAAATATTTGCTCGGTCAAAATCACACGGCTAAAAATAT------------TACAAAGCAGTTCCATAGGA
ATCACAGATGAGATTACCC--GGG-CCCGGCTTGTAAATGTTAGGAACGACATGT----CCATACC---CTCAGCATAAG
CAGTATCGCCCGTACATTGGA-GCCGTCTCCAAGGCCATGACCGAAACCATGTCGTCACACTCTCCCTCCATCTTATCGA
CTTTCAAGCACCGAGTTCGTTAGTCGTTACGCTATAAAAAGGGCCAGGGCTGAGCT--T-CTCTCCACCACAACACCACC
---AAAGCAGAGCCTAAACAAGCAC--ATATCCGCTTACGCTTAT----CCTTCCTTGGCGTCGGCAT----AGCATCTG
C-------AATGGCC---AACCACGGAGTCGCCGCTCTCCTGATCGCGTCCCTTCTCGTGGTGGCGGTCACCCTCGCCGA
CGCCAGGATCACCGTGAACG---TGCAGCGCGACAGCGTTAACGGAGGTGCGTCCATGTCAGCCAATCAACA---TCATC
CAGTTGATCTGCATGT--------GTAGCAGTGGCCAAATG---------------------------------------
---TGCCTGTACGTTTCGCAGGTTATGCGGCGAACAAGAAGGCGGTGCCGGTGCTGACGTGCAACAAGGTGAGCGCGGTG
CAACAGGGCGAGACCTGCTCCTCGCTTGCGGAGGACGCCGGGCTGACCCAGGAGGACTTCCTGGGCTTCAACCCCAACAT
CAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCATCCTCTGCCTAACACACGGTTCACTTGCAT----
---GGAC-TG----CGCAGCATCGTTA-GTTGCTGCTACTTA--------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr3B_684
--------------------------------------------------------------------------------
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---------------------------------------------TAT------------TACAAAGCAGTTCCATAGGA
ATCGCAGATGAGATTACCC--GGG-ACCGGCTTGTAAATGTTAGGAACGACATGT----CCATACCGTTGTCAGCATAAG
CAGTATCGCCCGTACATTGGA-GCCGTCTCCAAGGCCATGACCGGAACCATGGCGTCACACTCTCCCTCCATCTTATCGA
CTTTCAAGCACCGAGTTCGTTAGTCGTTACACTATAAAAAGG---AGGCATGAGCT--T-CTCTCCACCACAGCACCACC
---AAAGCAGAGCATAAACAAGCAC--ATATCCGCTTA-GCTTAT----CCTTC----------GCGCCGGCAGCATCTG
CATCTGCAAATGGCC---AACCACGGAGTCGCCGCTCTCCTGATCGCGTCCCTTCTCGTGGTGGCGGTCACCCTCACCGA
CGCCAGGATCACCGTGAACG---TGCAGCGCGACAGCATTAAAGGAAGTACGTCCATGTCAACGAATCAACA---TCATC
CAGTTGATCTGCATGTGTAGTACAGTAGCAGTGGCTAAATG---------------------------------------
---TGCCTGTACGTTTCGCAGGTTATGCGGCGAACAAGAAGGCGGTGCCGGCGCTGACGTGCAACAAGGTGAGCGCGGTG
CAACAGGGCGAGACTTGCTCCTCACTCGCGGAGGACGCCGGGCTGACCCAGGAGGACTTCCTGGGCTTCAACCCCAACAT
CAACTGCGTCAGGATCTTCGTCGGCCAGTGGGTCTGCCTCGACGCATCCTCTGCCTAACACACGGCT-----GCAT----
---GGAC-TACGCACGCAGCATCGCTA-TTTGCTGCTACTAC--TATGAATAAAGGAGGCTGGTCGCTATCCGTACA---
-------CCT---CCACCACTACTCAAGTTAAGTTTGGTATTTGCACTTCCCTCGCAAAAGGATC--------GAGGTTG
TAGTCC------GTCAGTCTGTCTTTGTACCAGCTTCGGCTTAAAAATAGGCCCAGCTGGTCGT-GCTTGATT--ACCAG
---TGCGTTTACCTTGTGTGTCTCTTTCCTTGATTGTGCCCGATTACCAGTGCATTACTTTGTGTCTCGCTTT-------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr3A_687
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TACAAAGCAGTTCCATAGGA
ATCGCAGATGAGATTACCC--GGGCCCCGGCTTGCAAATGTAAGGAACGACATGT----CCATACCGTTCTCAGCATAAG
CAGTATCGCCCGTACATTGGG-GCCGTCTCCAAGGCCATGACCCGAACCATGTCGTCACTCTCTCCCTCCATCTTATCGA
CTTTCAAGCACCGAGTTCGTTAGTCGTTACGCTATAAAAAGG---AGGGCCGAGCT--T-CTCTCCACCACAGCACCACC
---AAAGCAGAGCCTAAACAAGCAC--ATATCCGCTTACGCTTCTCTCCAGCACAACACCACCA----------CAGCTG
C-------AATGGCC---AACCACGGAGTCGCCGCTCTCCTGATCGCGTCCCTTCTT---GTGGCGGTCACCCTCGCCGA
CGCCAGGATCACCGTGAACG---TGCAGCGCGACAGCATTAACGGAGGTGCGTCCATGTCAACCAATCAACA---TCATC
CAGTTGATCTGCATATGTAGTACAGTAGCAGTGGCTGAATG---------------------------------------
---TGCATGTACGTTTCGCAGGTTATGCGGCGAACAAGAAGGCGGTGCCGGCGCTGACGTGCAACAAGGTGAGCGCGGTG
CAGCAGGGCGAGACCTGCTCCTCACTAGCGGAGGACGCCGGGCTGACCCAGGAGGACTTCCTGGGCTTCAACCCCAACAT
CAACTGCGTCAGGATCTTCGTAGGCCAGTGGGTCTGCCTCGACGCGTCCTCTGCCTAACACACGGTTCAGTTGCAT----
---GGAC-TA----CGCAGCATCGTTG-GTTGCTGCTACTTATGTATGAATAAAGGAGGCTGGTCGCTATGCGTACA---
-------CCT---CTACCACAACTCAAGTTAACTTTGGTATTTGCATTTCCCTCGCAAAAGGATC--------GAGGTTC
TAGTCTGTCAGTGTCAGTCTGTCTTTGTACCAGCTTTGGCTTAAAATTTGGGTCAGTTGGTCGT-GCTTGATT--ACCAG
---TGCGTTTACCTTGTGTGTCCCTTTCCTTGATTGTGCCTGATTACCAGTGCGTTACTTTGTGTCTCGCT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------
>chr2A_1767
TTTTGGCAAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------ACTAGCAAAAGAGCCCGTGCGTTGC
AACGGGAGAGAAAATAACACATGCTTTTAACCCAATAACCATGACTCAAGACCCTAATTGGTCCACGTCCTTTA------
-------------------------CGGTGGCCTCGGCACTCACACAACGAAAACACATTTGAATGTGGTCAGTCCTAAG
ACGTC---CTT----------------------------------------------TCTCTCTCAAAAAGATGAGAAAT
ATGTTGTTTTCCCCCGCGAGGTTTCTCAGAGGTGTGCATGCGTGGTTATTGATGTTTCCTTTCCTCTCAATATGGTTTTA
ATAGGTGTTTATTTGTAATTTGGATCGCCGCCAGTACGAACGAAAAACGGACTGTGCACTATATATTAAGTTTGCATCAA
AAATAATATTTTAGAAATATTTAATAGCTAACAATAATATCATATTTAGATTGTACATATTTTTCTAATCAAATTTCATA
TATAACATGTTAAAACCGGAGTTATGATTTAAAATATATGAATAATTTTGTT--------GCTGCTGATTGATTAACCAA
AAAGTCAGA-GATTTTCTGAGAAAATGCAAAAAAAGAGTTCGACTATGATTTAAACATGCACTGGGGATTAATTTACAGA
AAACAATGGGGATTTTTTTAAAATGGCAAGACGGTGAACCGACAAAAGCACTCCG
>chr3A_1775
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------AGACTAGCAAAAGAGCCCGTGCGTTGC
AACGGGAGAGAAAATAACATATGCTTTTAACCTAATAACCATGACTCAAGACCCTAATTGGTCCACGTCCTTTA------
-------------------------CGGTGGCCTCGGTACTCACACAACGAAAACACATTTGAATGTGGTCAGTCCTAAG
ACATC---CT------CT--------------------------------------CTCTCTCTCAAAAAGATGAGAAAT
ATGTTGTTTTCCCCCGCGAGGTTTCTCAGAGGTGTGCATGCGTGGTTATTGATGTTTCCTTTCCTCTCAATATGGTTTTA
ATAGGTGTTTATTTGTAATTTGGATCGCCGCCAGTACGAACGAAAAATGGATTGTGCACTATATATTAAGTTTGCACCAA
AAATAATATTTTAGAAATAGTTATCAGCTAACAATAATATCATATTTAGATTGTACACATTTTTCTAATCAAATTTCATA
TATAACATGTTAAAACCGGAGTTACGATTTAAAATATATGAATAATTTTGTT--------GCTGCTGATTGATTAACCGA
AAAGTCAGA-GATTTTCCGAGAAAATGCAAAAAAAGAGTTCGACTATGATTTAAACATGTACTGCGGATTAATTTACAGA
AAACAATGGGGATTTTTTTAAAATGGCACGACGGTGAACCGACAAAAGCACTC--
>chr6B_1775
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AGACTAGCAAAAAAGCCTGTGCGTTGC
AACGGGAGAGAAAAAAACACATACTTTTAACCCGATAACCATGATTCAAGACCCTAATTGGTCCACGTCCTTTATTTTCA
CATGACATCACTTTTCTGTTGCCGACGGTGGCCTCAGCACTCACACAACGAAAACACATTTGAATGTGGTCAGTCTAA--
--GTC---CTCTCTCTCTATATATCTATCTATCTATCTATCTATCTCTCTCGAACACTCTTTCAGAAAAATATGAGCAAT
ATGTTGTTTT-CCCCGCGAGGTTTCTCAGAGGTGTGCATACGTGGTTATCGATGTTTCATTTCCTCTCAATATGGTTTTA
ATGGGCGTTTCTTTGTAATTTGGATCGCCGTCAGTACGAAAGAAAAACGGACTGTGCACTATATATTAAGTTTGCACCAA
AATTAATATTTTAGAAATATTTAACAACTAACAATAATATCATATTTAGATTGTACACATTTTTCTAATCAAATTTCATA
TATAACATGTTAAAACAGGAGTTATGATTTAAAAGATATGAATAATTTTGTTTTAGATAAGCTGCTGATTGATTAACCGA
AAAGTCAGG-GGTTTTCTGA-AAAAATGCACAAAAAAACTCGGCCATTATTTAGACGTCTATTGCGGATTAATTTACAGA
AAACAATGGGGATTTTTT-AAAATGGCACGACGGTGACAAG-CAAAAGCACTCCG
>chr2A_1779
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------TAGCAAAAGAGCCCATACGTTGT
AACGAGAGAGAAAATAACACATGCTTTTAACCCAATAACCATGACTCAAGACCCTAATTGGTCCACGTCCTTTA------
-------------------------CGGTGGCCTCGGCACTCACACAACGAAAACACATTTGAATATGGTCAGTCCTAAG
ACGTC---CT------CT--------------------------------------CTCTCTCTCAAAAAGATGAGAAAT
ATGTTGTTTTCCCCCGCGAGATTTCTCAGAGGTGTGCATGTATGGTTATTGATGTTTCATTTCCTCTCAATATGGTTTTA
ATAGGTGTTTATTTGTAATTTGGATCGCCGCCAGTACGAACGAAAAACGGACTGTGCACTATATATTAAGTTTGCACCAA
AAATAATATTTTAGAAATATTTAACAGCTAACAATAATATCATATTTAGATTGTATATATTTTTTTAATCAAATTTCATA
TATAACATGTTAAAACCGGAGTTACGATTTAAAATATATGAATAATTTTGTT--------GCTGCTGATTGATTAACCAA
AAAGTCAGA-GATTTTCTGATAAAATGTAAAAAAAGAGTTCGACTATGATTTAAACATGTACTGCGGATTAATTTACAGA
AAAGAATGGGGATTTTTTTAAAATGGCACGACGGTGAACCGACAAAAGCACTCCG
>chr2A_1779
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------TAGCAAAAAAGCTCGTGCGTTGC
AATGAGAGAGAAAATTACACGCGCTCTTAACCCAGTAACCATG-CTCAAGACCCTAATAGGCCCATCTCCTTTATTTTCA
CATGGCATCACATTTGTGTTGCCGCG--------------------------------TTTGAATGTGGTCAGTCCTAAG
GCGTCTCTCT------CT--------------------------------------CTCTCTCAGAATAAGATGAGAAAT
ATGTTACTTT-TCCCGCGAGGTTTTTTAGAGGTGTGCATGCGTGGCTATCGATGTTTTCTTTCCTCTTAATCTAGTTTTA
ATGGGTGTTTATTTGCAATTTAGATCGCCGCCGGTACGAAAGAAAAATGGACCATGCACTATAGATTAAGTTTGCACCAA
AAATAACATTTTAGAAATATTTAACAACTAAAAATAACATCACATTTAGATTCTACATATTTTTCTAAACAAATTTCATA
TATAACATGTTAAAATCAGAGTTACGGTTTAAAAGATATGAATAATTTTGTTTTAGATAAACTGCGGATTGATTAACCGA
AAAGTCAGGAGGTTTTCTGT-TAAAA-CAAAAAAATGATTCGGC--TGACTTAAATATGGACGATGGGTTGATT------
-------------------------------------------------------
>SNPs
-S-S---S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--------
-S----SS----------------S----------------S------------S-------S---S------SS---S-
S------S-----------S------------------S-----SS-S-------SSSS---------------------
------S-----------------------------------S-------S-----------------------------
----------S-------S-----------------------------------------SSSSSSSSSS-------SS-
----------S------------------------S--------------------------------------------
------------------------S---SS-------------S-----------SSSS---------------------
---S------------------------------------------S---S-----------------------------
-----------------------------S----------------------------S---------------------
SSS------------------------SS----------------S-SS----S--------------------------
--------------SSSS--------------S--------------------------------S--------------
-------S---------S----S------------------------------------------S------SSS-----
------------------------------------------------S-------------------------------
-S------------------------------------------------------------------------------
--------S--------------------------S--------------------------------------------
----------------------------------------------------------S---------------------
--------------------S-----------------S---------------------------------------S-
--S-------------------------------S--------S----------S-------------------------
-------------------------------------------------------------------S------------
---------------------------S---------------------------------------------SS-----
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-------------------------S----------S-------------------------------------------
-------S------------------------------------------------------------------------
-------------------S------------------------S----------
>forward_989
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GAGCCTGACGAGCACCTATC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>reverse_2035
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GGGCACTCACACAACGAAAA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
