>input_sequence_80921
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GGAACAGGCCCTCCGCGACCAGGCGCCGGCCAGGGCGGCGGGGCGCAGGCCGACGCGGTTCACGGCTCTGGAGCTCGCGG
CGGCCGAGCAGCTCCTTCACCTCAGCGAGAGCAGCTGCTCCTCGGGCGCCGCCTTCACGCCGCTAGGATCGGGGATCGCC
GCGTCGGCGGCCTGCTCCTCCTCCTCGCCACGCTCCGTCAACGCTGCGCCCGCCGCAACCGCGCGCGACCCCGTCGTGGG
CATCGGCGCGGATCGCGAGGAGGAGGACGACGAGCAGGAGCTGGGCGGGAGGCCGCGGGTGAGCAGGAGGTACCGCTCGG
TAGCGGAGTTGTACGACGCTACGGATCCTGCTGGAGCGCGGCGGAGGAAGGGCAAGGCCGTCGCCGGCGGCACAACGGCG
GAGAGGAGGAAGTAG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>chr7A_1_TraesCS7A01G272700
TGTAGTTCATACTCCCTCCATTTTAAAATATAGTGCGCCCGCGTTTCCCGAGGTCAAACTTTGACCATAAATTTAACAAA
CGAGACCGACTGTGGCGGGAGAAAAAATTACATAATTAAAAACTTCTTTTGAATACGAATTCACTGATATAACTTTTGCT
TCCGCTGCAATCGGTTTTGCTAGTTAAATTTACGGTCAAAGTTGAAGTACGGGGATAGACGAAACACTACATTGTGGAAT
GGAGGGAGTATTAGAATCTTAAAAAAAAGACTTTTAGGAAGGAGGGAGGGAGTATGTGCGTATGAAGCGTCTACGGAGCG
TGTGTGTGTAACGTGTTAAACAAAACATTTTGGAACATA-GAAGAATAGTG-TGTTGCTAGTCCTCGGCCCTACCGAGTA
CCTGGTCGATTACCCACCACGTGAAGTGCGGTGAGATGACGTGGCAGCTATATACCCCTCCCAGTTATCTCGTCCACAGA
AATATCACACGAATCTCATTAGCATTTGCGCGCCGGCAGCCATCTTTCGCATAGCCCCTCAAAGTTATACTCGTACATAG
TTCTACATACGCGTA---CTAATTTCTACTGCTGCCTATTCTACAAAATGGAACTTTTGGCAGTGTCTTTATGTGGAGAG
ATTTGCTAATCGTGTCCCACGGGATGCGACTGACATCCAGTAAAAGAAAAAAAAATCTTGAACAG-CAACTGACATCGAA
AGTGGAGCACTACGCTTAGCCTGCACTCAACGAAAAACAAAGTACGCTCAG-----------------------------
---CCCCCTTGGGTTTCTTGTAATTCTGCAAGCACCCCGGTCGAAGTCGGTTTCGTAGTGCCCAGTCACGGCGCAGAAAT
ATCACACGATTAACCTTAGCCCAACAAAATAAAAATGAAAATTAGAGTGGGAGAGAGGCAGAGAGGCACACGAAATTAAC
CGGAGTCCAACCCACCCCACGCCGGGCGCGACCTAGGAAGCAAACCACCGGCCAGGCCACAACCGCCGTCCGCCGGGGAT
GGAACAGGCCCTCCGCGACCAGGCGCCGGCCAGGGCGGCGGGGCGCAGGCCGACGCGGTTCACGGCTCTGGAGCTCGCGG
CGGCCGAGCAGCTCCTTCACCTCAGCGAGAGCAGCTGCTCCTCGGGCGCCGCCTTCACGCCGCTAGGATCGGGGATCGCC
GCGTCGGCGGCCTGCTCCTCCTCCTCGCCACGCTCCGTCAACGCTGCGCCCGCCGCAACCGCGCGCGACCCCGTCGTGGG
CATCGGCGCGGATCGCGAGGAGGAGGACGACGAGCAGGAGCTGGGCGGGAGGCCGCGGGTGAGCAGGAGGTACCGCTCGG
TAGCGGAGTTGTACGACGCTACGGATCCTGCTGGAGCGCGGCGGAGGAAGGGCAAGGCCGTCGCCGGCGGCACAACGGCG
GAGAGGAGGAAGTAGAAAGAGATCAGGGGGTCACTCTTGCCTGTAATTATGGGCTGCTGTTAGCAGGGACTAGTAGCCTG
GTGTAGAGAACGAAGAGAAGCTTTGCTTCTGCTTCTGCTTCTTCTCCGGTGTACGTATGTGTATCGCATAGATCAAGAAA
TAGTGATCTTCTCTTCACAAGAG---GAGTCACAAGGGTAGTTAGTTAGGAGCTTAATCAGGTGTAAATTATTATGCATC
GAG--CTAGTCTTGAATAAACCAGGATGAATACCTTGTGCTTGGATCGATTTGCAGGCAGCAGAGACTCCATTGAATCTA
CGTACTTTCATCTGAATTACAACAACTGTAGTGATTTATCACGGAGCCTTTTCTCCCCCTTGGTGAT-TTTTAACATTGT
ACTGTACTGTAGTGATTTATCACGGCGCTTTTAGACTTGAAATGGAATCTGATTTGTTCTTGCTTGGTGGTTTTTAGAAG
AGCCAGCCGAGGGCGTCTATTCCACCGATTCAATCTTC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TACGTATTACTAGTACAAACGATCAGCTTTCCAATGG
GCGAAATGACGGCAGGCCGTACGACGAAACGAGTAGCTAGCTCCGGGCGTATACAGCCTGATCGAGGTCGGCGTCCAGGA
G----------------GCAGGACATGGCAGACGTTGGTGTTCGTCCCGAGCGACTGCAGCACACCAAGCCATCCA----
-----TGCCTAGTGGAAAACTGGGTATCACCGTTCGATCCTCCACCGTCCACAGTTCGTCCACACCAAGTCGTCCGCATC
GTAGTTCCACAATCTCAAAGCGCTTAAGGGTCATTCAGGAAGGTAGCCAGAAAGACAAACATAGGCTACGAGGGGTTCGG
TCTGGATGAAATTGGGGCGGCAAGCCCATCAATCCAAATCCCACGAAAAAAATGACCAAGCTAACGATCGATCTACGTGT
GCTGTGAACGGGATTGCGAGGGGGAAAAAAGGCGGCTGAACTGCATCAGAAACAGATGCATGGTATGAGATGTAGTACTC
CAGTCCAGTAG
>chr7D_290
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GAGGATGTGCGTATGAAGTGTCTACGCAGCA
TGTGTCTGTAACGTGTTAAACAAAACATTTTGGAACGTA-GAAAGAATAGATTATTGCTAGTCCCCGGCCCTACCGAGTA
CCTGGTCGACTGCACACCACGTGAAGTGCGGTGAGATGACGTGGCCGCTATATACCCCTCCGAGTTACCTCGTCCACAGA
AATATCACACGAATCTCATTAGCATTTGCGTACCGGCAGCCATCTTCCGCATAGCCCCTCAAAGTTATACATAGCTCGCA
AGTCGAATACGCGTA---CTAATTTCTACCGCTGCATATTCTATAAAATGGAACTTTTGGCAGCGTCTTTATGTGGAAAG
ATTTGCTAATCTTGTCCCACATGATGTGACTGACACCCAGTAATTTTTCTCT---TCTTGAACAGCCAACTGACATCGAA
AGTGGACCAT--------------------------------TACGCTCAG-----------------------------
---GCCCCTTGGGTTTCTTGTAATTCTGAATGCACCCCGGTCGAAGTCGGTTTCGTAGTGCCCAGTCACGGCGCAGAAAT
ATCACACGATCAACCTTAGCCCAACAAAATAAAAATGAAAATTAGAGTGGGAGAGAGGCAGAGAGGCACACGAAATTAAC
CGGAGCCCAACCCACCCCACGCCGGGCGCGACCTAGGAAGCAAACCACCGGCCAGGCCACGACCGCCG-------GGCAT
GGAGCAGGCCCTCCGCGACCACGCGCCGGCCAGGGCGGCGGGGCGCAGGCCGACGCGGTTCACGGCTCTGGAGCTCGCGG
CGGCCGAGCAGCTCCTCCACCTCAGCGAGAGCAGCTGCTCCTCGGGCGCCGCCTTCACGCCGCTAGGATCGAGGACCGCC
GCGTCGGCGGCCTGCTCCTCCTCCTCGCCTCCCTCCGTCAACGCTCCGCCTGCCGCAACCGCGCGCGACCCCGTCGTCGG
CCTCGGCGCGGATCACGAGGAGGAGGACGACGAGCAGGAGGTGGGCGGGAGGCCGCGCGTGAGCAGGAGGTACCGCTCGG
TAGCGGAGTTGTACGACGCTACGGATCCGGCTGGAGCGCGCCGGAGAAAGGGCAAGGCCGTCGCCGGCGGCACAACGGAG
GAGAGGAGGAAGTAGAAAGAGATCAGGGGGTCACTCTTGCCTGTAATTATGGGCTGTTGTTAGCAGGGAGTAGTAGCCTG
GGGTAGAGAACGAATAGAAGCTTTGCTTCTGCTTCTGCTTCTTCTCCGGTGTACGCATGTGTATCGCGTAGATCAAGAAA
TAATGATCTTCTCTTCACAGGAG---GAGTCACTAAGGTAGTTAGTTAGGAGCTTAATCAGGTGTAAATTATTATGCATC
GAGAGGTAGTCTTGAATAAACCAAGATGAATACCTTGTGCTTAGATCGATTTGCAAGCAGCAGAGACTCCATTGAATCTA
CGTACTTTCATCTGAATTACAAC---TGTAGTGATTTATCACGGCGCCTTTTCTCCTCATTGTAGTGATTTTAACACTGT
ATTGTACTGTAGTGATTTATCACGGCGCTTTCAGACTTGAAATGGAATTTGATTTGTTCTTGCTTCGTGGTTTTTAGAAG
AGCCAGCCGAGGGTGTCTATTCCACCTGTTCAATCTTCTACTCCCTCTGTAATGAAATATACTCCCTCCTTTCATCTATA
TAGGGCCTAATGCGTTTTTCGAGGCTAACTTTGATCAAATGTTAGAGTAATAATATATGACATGCAATTTACACAAAGCA
TACCGTCAAATACGTATGTGAAAGGAGCTTTCAATGATATAATTTTTACATTATACATCTCATGCACTATTAATCTTGTC
AATAGTTAAAGACGGTCTTGAAAAATGAATTAGGCTCTATACAGATGGAAGGAGAAAGTAAGAGTGTTTAGATCATTAAA
GTAGTCATCTAAACGCTCTTATATTATTAGTTTACGGAGGGAGTACGTATTACTAGTACAAACGATCAGCTTTCCAATGG
GAGAAATGACGGCAGACCGTACGATGAAATGAGTAGCTAGCTCCGCGCGTATACGGCCTGATCGAGGTCGGCGTCCAGGA
G----------------GTC----------------GGTGTTCGTCCCGAGCGACTGCAGCACAT---------CA----
-----TGCCTAGAGGGAAACTGGGTATCACGGTTGGATCCTCCATCGTCCACAGTACGTCCACACCAAGTCTTCCGCGTA
GTAGTTCCACCATCTCAAAGCGCTTAAGGGTCATTCAGGAAGGTAGCCAGAAAGACAAAGATAGGTTTCGAGGGGTTCGG
TCTGGATGAAATTGGGGCGGCAAGCCCATCAAACCAAATCCCACGAAAAAAAAGACCAAGCTACCGATCGATCTACGTGT
GCTGTCAACGGGATCGTGAGGA--AAAAAAGGCAGCTGAACTGCATCAGAAACAGATGCATGGTATGAGATGTAGTACTC
CAGTCCAGTAG
>chr7B_336
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TTAACCATAGCATTTTGGAACGCAGGAAGAATAGTG-TATTGCTAGTCCCGGGCCCTACCGTGTA
CCTGGTCGATTGCACACCACGTGAAGTGCGGTT-GATGACGTGGCATCTATATACTCCTCCGAGTTATCTCGTCCAC-GA
AATATCACACGAATCTCGTTAGCATTTGCGTACCGGCAGCCATCTTCCGCATAGCCCCTCAAAGTTATACATAGCTCGCA
GGTCGAATACGCGTAGTACTAATTTCTACTGCTGCAGATTCTACAAAATGGAACTTTTGGCAGTGTTTTTATGTGGAAAG
ATTTGCTAATCATGTCCCACATGATGCGACTGACATCCAGTAA---AAAAAAAAATCTTGAACAG-CAACTGACATCGAA
AGCGGACCAC--------------------------------TACGCTCAGCCTGCACTCAAAGGAAAATAAAGTCCGCT
CAGCCCCCTTGGCTTTCTTGAAATTCTGCATGCACCCCGGTCGAAGTCGGTTTGGTAGTGCCGAACCACGGCGCAGCGAC
--CACACGATTAACCTTAGCCCAACAAAATAAAAATGAAAATTAGAGTGAG--------AGAGAGGCACACGAAATTAAC
CGGAGCCCAACCCCT-CCACGCCGGGCGCAACCTAAGAAGCAAACCACCGGCCAGGCCACAACCGCCG-------GCCAT
GGAGCAGGCCCTCCGCGACCACGCGCCGGCCAGGGCGGCGGGGCGCAGGCCGACGCGGTTCACGGCTCTGGAGCTCGCGG
CGGCCGAGCAGCTCCTCCACCTCAGCGAGAGCAGCTGCTCCTCGGGCGCTGCCTTCACGCCGCTAGGATCGGGGACCGCC
GCGTCGGCGGCCTGCTCCTCCTCCTCGCCTCGCTCCGTCAACGCTACGCCCGCCGCAACCGCGCTCGACCCCGTCGTCGG
CTTCGGCGCGGATCACGAGGAGGAGGACGACAAGCAGGAGGCGGGCGGGAGGCCGCGGGTGAGCAGGAGGTACCGCTCGG
TAGCGGAGTTGTACGGCGCTACGGATCCGGCTGGAGCGCGCCGGAGAAAGGGCAAGGCCGTCGCCGGCGACCCAAGGGAG
GAGAGGAGGAAGTAGAAAGAGATTAGAGGGTCACTCTTGCCTGTAATTATGGGCTGTTGTTAGCAGGGAGTAGTAGCCT-
GGGTAGAGAACGAAGAGAAGCTTTGCTTCTGCTTCT------TCTCCGGTGTACGTATGTGTATCGCGTAGATCAAGAAA
TAATGTTCTTCTCTTCACAGGAGGTAGAGTCACTAAGGTAGTTAGTTAGGAGCTTAATCAGGTGTAAATTATTATGCATC
A--AGCTAGTCTTCAATAAACCAGGATGAATAACTTGTGCTTGGATCGATTTGCAAGCAGC--AGACTCCATTGAATCTA
CGTACTTTCATCTGAATTACAAC---TGTAGTGATTTTCAAC--------------------------------------
ACTGTACTGTAGTGATTTATCACGGCGCTTTTAGACTTGAAATGGAATTTGATTTGTTCTTGCTTCGTGGTTTTTAGAAG
AGCCAGCCGAGGGCGTCTATTCCACCGATTCAATCTTCTAC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TACGTATTACTAGTACAAACGATCAGCTTTCCAATGG
GCGAAATGACGGCTGACCGTACGACGAACC---TAGCTAGCTCCGGGCGTATACAGCCTGATCGAGGTCGGCGTCTAGGA
GGCAGGACATGGCAGACGTC----------------GGTGTTCGTCCCGAGCGACTGCAGCACAT---------CAAGCC
ATCCATGCCTAGAGGAAAACTGGGTATCACGGTTGGATCCTCCATCGTCCACAGTACGTCCACACCAAGTCTTCCGCATA
GTAGTTCTACCATCTGAAAGCGCTTAAGGGTCACTCAGGAAGGGAGACAGAAAGACAAAGATAGGTTACGAGGGGTTCGA
TCTGGATGAAATTGGGGCGGCAAGCCCCTCAATCGAAATCCCACGAAGAAAATGACCAAGCTACCGATCGATCTACGTGT
GTTGAGAACGGGACTGTGAG------------------------------------------------------------
-----------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--------------S-------S---S
-----S------------------------------S----------------S----------S---------------
-----------S-S-----------------------------------------------S------------------
------------------------------SS--------------S-----------------------SSSSSSSSSS
SSSSSS-----------------------------S-----------------------------------------S--
-----------S--------SS---------------------SSS----------------------------------
------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------SSSSSSS--S--
---S-----------------S----------------------------------------------------------
----------------S----------------------------------------------------------S----
-----------------------------S---------------S-------------------------------S--
-S------------S-------------------------S---------------------------------------
----------------------------S-----------S-----S-------------------------------S-
--------------------------------------------------------S------------S----------
-S-----------------------------------------------------------------S------------
--S----------------S-------------S-S--------------------------------------------
-------------------------------------------------------S------------------------
-----------------------SSS------------------S-----------S-S---SS-SS---------S---
------------------------------------------------S----------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
------------------SSSSSSSSSSSSSSSSSS----------------------------SSSSSSSSSS------
------------S-----------------S---S---------S----------S---------------S-------S
----------S------------------------------------------------S-----S--------------
---------------------------------------------------------------S----------------
----------------S----SSS---------S----------------------------------------------
-----------
>forward_179
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TCCGCTGCAATCGGTTTTG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_2552
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GTCCGCATC
GTAGTTCCACA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
