>input_sequence_80832
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-----------------------------------------ATGATATACGTAATAACTCGGACATCTATTTCAAATGCA
TATCCCATTTTTGCGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTCGATACTGAAGTTCCCCAAGCTGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAA-AAAGGGAGGGTTGAATGTAGGTGCTGTTCTTATTTTGCCCGAGGG
ATTCGAATTAGCGCCG-CCCGATCGTATTTCCCCTGAGTTAAAAGAAAAGATAGGAAATCTTGCTTTTCAGAGTTATCGT
CCCGAT-AAAAAAACATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATTGTCT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr6B_1_TraesCS6B01G329700
GCCTTTAAGTTTTGGAGACCACACCCACTGCATCTCCTTCTTCTCTGATTAGTGTGTCGCTGACATCCTCATGAGCCAGA
TCGTCTGAATCGGCAACAACCTCGCTAGCAACACCGGAGTATGAGCCAGGCAGCCAGCTCCCTCTTCTACCAACATTGCG
TACTCAAGGCGCTGGCCGGCACCGCGCTGCTCTCCATCAACGCCAACAGTTCTGGGATCAGAGGAAACCAGGTCTTCGCA
GTACACACACACGATGAAGTTAACACGTCACACTTTTGAGCATTTTACATTAGTCGATGCACGTAGCAAAATTAACAAGG
TAACCCTATTTTTGGTATTAGCGTGCTAATCGAAGCCGTCTGTTATAGCGAAGCAAAAATTGCATTAATCTTCATTGCTT
TAATAAGCGTGTTCATTCAAAATTTCCTGTTCACCGACACTCGTGGACCAGCGGACGCCATCCGCTTGCATCCCTTGTCT
GCTAATAAGGAGTTGGCGTGAATATTAATATTGTGTCAATTTTCCCTACAGTTTCTATGAATGGGCATTTTGAAAGCAGA
GCTAGCTAAGGCTGGTTGTAATGATAGTATCATAGCTAGTATCATACATGCCAACTAGGCAAGTTTGATGAGGTGTCATA
GCATTAAATAAAGAGAGAGAGGGTTGAGTATCACATCATGATACAGTATCATAATAAATGTTATACTACTATGTATCATG
CATGCCAATAAATAAAGTACTACATGATACTAGTATATGATACTTCCCATTATAACCAGCCTAACGCCAGCGACACAGTT
GAAGTCCAGCATACGCATGTCAAAGAGCGAACACACATTAAGACTAGCCACAATGGATAGTAACATAGAGTAGTTTCCCA
TATATGTAGGGGAAACTGAGA-AAGAGGACAGATCTATCCTGATGGTAGCAAGAGTAACAATACAATCTATAATGCTACG
TCAACAGGTATAGTAAGAAAAATACTACNNNNNNNNNNATCATGATATACGTAATAACTCGGACATCTATTTCAAATGCA
TATCCCATTTTTGCGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTCGATACTGAAGTTCCCCAAGCTGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAA-AAAGGGAGGGTTGAATGTAGGTGCTGTTCTTATTTTGCCCGAGGG
ATTCGAATTAGCGCCG-CCCGATCGTATTTCCCCTGAGTTAAAAGAAAAGATAGGAAATCTTGCTTTTCAGAGTTATCGT
CCCGAT-AAAAAAACATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACCGAGGAAGAGGACAGATCT
ATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACGTCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
AAG---GGGGGGGTATGAAATATCCATAGTTGATGCATCAGATGGACGCCAAGTGATTGATATTATACCTCCCGGACCAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
G---ACGCAGAAATCGTGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTGTTCTTCTTCGCATCCGTTATTTTGGCACA
AG-TTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCCCGGGATTTCTT
ACCATCAAGTTGGTAAAAAGCCTCGATTTATTGGCAATTGCTAGAATTATCTATGATCTATTTTGGAAATCCTTTTTT--
-------------TGTTTAGACTGCTTTTTGTTTATGAGATGTCTGGAATTCCTTATTTATATCCCATGCAAAAGAAGAG
AATCCAAGGCAAAGGCGAGAACAATAAAATTAAAATTTCTTCCTTTTCGGAGGGATTGCAGGTCTTCTTAATCGTCTATT
CGGCACAAGAAAAAGGCTTTTTCTTGTGCCGATTCTTCTTGTATCAAAATAAGAATCCTTTTTCTTCCTAATTNNNNNNN
NNNGGACGCCAAGTGATTGATATTATACCTCCCGGACCAGAACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCA
ACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAGGGGGACGCATAAATCGTGCTTTAGGATCCATTACGTGTCC
AAGGCCTTATTACTACTCTATGTTATTACCTCTATAGTGGGGAGTA
>chr5D_876
ATCAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GATATACGTAATAACTCGGACATCTATTTCAAATGCA
TATCCCATTTTTGCGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTCGATACTGAAGTTCCCCAAGCTGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAA-AAAGGGAGGGTTGAATGTAGGTGCTGTTCTTATTTTGCCCGAGGG
ATTCGAATTAGCGCCG-CCCGATCGTATTTCCCCTGAGTTAAAAGAAAAGATAGGAAATCTTGCTTTTCAGAGTTATCGT
CCCGAT-AAAAAAACATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACCGAGGAAGAGGACAGATCT
ATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACGTCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
AAG---GGGGGGGTATGAAATATCCATAGTTGATGCATCAGATGGACGCCAAGTGATTGATATTATACCTCCCGGACCAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
G---ACGCAGAAATCGTGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTGTTCTTCTTCGCATCCGTTATTTTGGCACA
AG-TTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCCCGGGATTTCTT
ACCATCAAGTTGGTAAAAAGCCTCGATTTATTGGCAATTGCTAGAATTATCTATGATCTATTTTGGAAATCCTTTTTT--
-------------TGTTTAGACTGCTTTTTGTTTATGAGATGTCTGGAATTCCTTATTTATATCCCATGCAAAAGAAGAG
AATCCAAGGCAAAGGCGAGAACAATAAAATTAAAATTTCTTCCTTTTCGGAGGGATTGCAGGTCTTCTTAATCGTCTATT
CGGCACAAGAAAAAGGCTTTTTCTTGTGCCGATTCTTCTTGTATCAAAATAAGAATCCTTTTTCTTCCTAATT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5D_876
ATCAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GATATACGTAATAACTCGGACATCTATTTCAAATGCA
TATCCCATTTTTGTGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTCGATATTGAAGTTCCCCAAGCTGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAA-AA-GGGATGGTTGAATGTAGGTGTTGTTCTTATTTTGCCCGAGGG
ATTCGAATTAGCGCTG-CCCGATCGTATTTCCCCTGAGTTAAAGGAAAAGATAGGAAATCTTGCTTTTCAGAGTTATCGT
CCCGATAAAAAAAACATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACCGAGGAAGAGGACAGATCT
ATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACATCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
AAG---G-GGGGGTATGAAATATCCATAGTTGATGCAGCAGATGGACGCCAAGTGATTGTTATTATACCTCCCGGACTAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
GGGGACGCAGAAATCATGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTGTTCTTCTTCGCATCCGTTATTTTGGCACA
AG-TTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGCATTTCTAGGTCCCGGGATTTCTT
ACCATCAAGTTGGTAAAAAGCCTCGATTTATTGGCAATTGCTAGAATTATCTATGATCTATTTTGGAAATCCTTTTTT--
-------------TGTTTAGACTGCTTTTTGTTTATGAGATGTCTGGAATTCCTTATTTATATCCCATGTAAAAGAAGAG
AATCCAAGGCAAAGGCGAGAACAATAAAATTAAAATTTCTTCCTTTTCGGAGGGATTGCAGGTCTTCTTAATCGTCTATT
CGGCACAAGAAAAAGCCTTTTTCTTGTGCCGATTCTTCTTG--TCAAAATAAGAATCCTTTTTCTTCCTAATT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr1A_876
ATCAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GATATACGTAATATCTCGGACATATATTTCAAATGCA
TATCCCATTTTTGCGCAGCAGTGTTATGAAAACCCATGAGAAGCAACTAGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTCGATACTGAAGTTCCCCAAGATGTGCTTCCTGATACTGTATTTGAAGTAGTTCTTCGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAA-AAAGGGAGGGTTGAATGTAGGTGCCGCTCTTATTTTGCCCGA-GG
ATTCGAATTAGCGCCG-CCCGATCGTATTTCCCCTGAGTTAAAAGAAAAGATAGGAAATCTTGCTTTTCAGAGTTATCGT
CCCGAT-AAGAAAACATTCTTGTGATAGGCCCTGTTCACGGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGACCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACCGAGGAAGAGGACAGATCT
ATCCTGATGGTAGCAAGAGTAACAATACAATCTATAATGCTATGTCAACAGGTATAGTAAGAAAAATACTACTTAAAGAA
A-----GGGGGGGTATGAAATATCCATAGTTGATGCATCAGATGGACGCCAAGTGATTGATATTATACCTCCCGGACCAG
TACTTCTTGTTTCAGAGGGGGAATCCATTAAGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
GTGGACGCAAAAATCGTGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTTTTCTTCTCCGCATCCGTTATTTTGGCACA
AGTTTTTTTTGGTTCTAAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCTCGGGATTTCCT
ACCATCAAGTTGGTAAAAAGCTTCGATTTACTGGCAATTACTAGAATTATCTATGATCTATTTTGGAAATCCTTTTTT--
-------------TGTTTAGACTATTTTTTGTTTATGAGATGTCTTGAATTCCTTATTTATATCCCATGCAAAAGAAGAG
AATCCAAGGCAAATGCGAGAACAATAAAACTAAAATTTCTTCCTTTTAGGAGGGATTGTAGGTCTTCTGAATCGTCTATT
CGGCACAAGAAAAAGCCTTTTTCTTGTGCCGATTCTTCTTGTATCAAAATAAGAATCCCTTTTCTTCCTAATT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr1A_876
ATCAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GATATACGTAATAACTCGGACATCTATTTCAAATGCA
TATCCCATTTTTGCGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTCGATATTGAAGTTCCCCAAGCTGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAA-AAAGGGAGGGTTGAATGTAGGTGCTGTTCTTATTTTGCCCGAGGG
ATTCGAATTAGCGCCG-CCCGATCGTATTTCCCCTGAGTTAAAAGAAAAGATAGGAAATCTTGCTTTTCAGAGTTATCAT
CCCGATAAAAAAAACATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACCGAGGAAGAGGACAGATCT
ATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACGTCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
AAA----GGGGGGTATGAAATATCCATAGTTGATGCATCAGATGGACGCCAAGTGATTGATATTATACCTCCCGGACCAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
GGGGACGCAGAAATCGTGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTGTTCTTCTTCGCATCCATTATTTTGGCACA
AG-TTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCTCACAATTTCTT
ACCATCAAGTTGGTAAAAAGCCTCGATTTATTGGCAATTGCTAGAATTATCTATGATCTATTTTGGAAATCCTTTTTT--
-------------TGTTTAGACTGTTTTTTGTTTATGAGATGTCTGGAATTCCTTATTTATATCCCATGCAAAAGAAGAG
AATCCAAGGCAAAGGCGAGAACAATAAAATTAAAATTTCTTCCTTTTCGGAGGGATTGCAGGTCTTCTTAATCGTCTATT
CGGCACAAGAAAAAGGCTTTTTCTTGTGCCGATTCTTCTTGTATCAAAATAAGAATCCTTTTTCTTCCTAATT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr3B_876
ATCAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GATATACGTAATAACTCGGACATCTATTTCAAATGCA
TATCCCATTTTTGCGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTCGATATTGAAGTTCCCCAAGCTGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAA-AAAGGGAGGGTTGAATGTAGGTGTTGTTCTTATTTTGCCCGAGGG
ATTCGAATTAGCGCCG-CC-GATCGTATTTCCCCTGAGTTAAAAGAAAAGATAGGAAATCTTGCTTTTCAGAGTTATCGT
CCCGATAAAAAAAACATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACCGAGGAAGAGGACAGATCT
ATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACGTCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
AAA----GGGGGGTATGAAATATCCATAGTTGATGCATCAGATGGACGCCAAGTGATTGATATTATACCTCCCGGACCAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
GGGGACGCAGAAATCGTGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTCTTCTTCTTCGCATCCATTATTTTGGCACA
AG--TTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCTCGCGATTTCTT
ACCATCAAGTTGGTAAAAAGCCTCGATTTATTGGCAATTGCTAGAATTATCTATGATCTATTTTGGAAATCCTTTTTTGT
TTAGACTATTTTTTGTT----------------TATGAGATGTCTGGAATTCCTTATTTATATCCCATGCAAAAGAAGAG
AATCCAAGGCAAAGGCGAGAACAATAAAATTAAATTTTCTTCCTTTTTGGAGGGATTGCAGGTCTTCTTAATCGTCTATT
CGGCACAAGAAAAAGGCTTTTTCTTGTGCCGATTCTTCTTGTATCAAAATAAGAATCCTTTTTCTTCCTAATT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr2D_876
ATCAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GATATACGTAATAACTCGGACATCTATTTCAAATGCA
TATCCCATTTTTGCGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTCGATATTGAAGTTCCCCAAGCTGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAA-AAAGGGAGGGTTGAATGTAGGTGCTGTTCTTATTTTGCCCGAGGG
ATTCGAATTAGCGCCG-CCCGATCGTATTTCCCCTGAGTTAAAAGAAAAGATAGGAAATCTTGCTTTTCAGCGTTATCGT
CCCGATAAAAAAAACATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACCGAGGAAGAGGACAGATCT
ATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACGTCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
AAA----GGGGGGTATGAAATATCCATAGTTGATGCATCAGATGGACGCCAAGTGATTGATATTATACCTCCCGGACCAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCACCCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
GGGGACGCAGAAATCGTGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTGTTCTTCTTCGCATCCGTTATTTTGGCACA
AG-TTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCTCGCGATTTCTT
ACCATCAAGTTGGTAAAAAGCCTCGATTTATTGGCAATTGCTAGAATTATCTATGATCTATTTTGGAAATCCTTTTTT--
-------------TGTT----------------TATGAGATGTCTGGAATTCCTTATTTATATCCCATGCAAAAGAAGAG
AATCCAAGGCAAAGGCGAGAACAATAAAATTAAAATTTCTTCCTTTTCGGAGGGATTGCAGGTCTTCTTAATCGTCTATT
CGGCACAAGAAAAAGCCTTTTTCTTGTGCCGATTCTTCTTGTATCAAAATAAGAATCCTTTTTCTTCCTAATT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr1B_876
ATCAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GATATACGTAATAACTCGGACATCTATTTCAAATGCA
TATCCCATTTTTGCGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTCGATATTGAAGTTCCCCAAGCTGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAA-AAAGGGAGGGTTGAATGTAGGTGCTGTTCTTATTTTGCCCGAGGG
ATTCGAATTAGCGCCG-CCCGATCGTATTTCCTCTGAGTTAAAAG-AAAGATAGGAAATCTTGCTTTTCAGAGTTATCAT
CCCGATAAAAAAAATATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACTGAGGAAGAGGACAGATCT
ATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACGTCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
AAA----GGGGGGTATGAAATATCCATAGTTGATGCATCAGATGGACGCCAAGTGATTGATATTATACCTCCCGGACCAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
GGGGGCGCGGAAATCGTGCTTCAGGATCCACTACGTGTCCAAGGCCTTTTGTTCTTCTTTGCATCAGTTATTTTGGCACA
AG-TTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCTCGCGATTTCTT
ACCATCAAGTTGGTAAAAAGCCTCGATTTATTGGCAATTGCTAGAATTAT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr3D_876
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TCCCA
TATATGTAGGGGGAAACCGAGGAAGAGGACAGATCTATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACG
TCAACAGGTATAGTAAGAAAAATACTACGTAAAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------AA-AAAGGGGGGTATGAAATAT--------------------------
--------------------------------CCATAGTTGATGCATCAGATGGACGCCAAGTGNNNNNNNNNN------
---------------------------------------------------AGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACCGAGGAAGAGGACAGATCT
ATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACGTCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
AGGGGGGGGGGGTTATGAAATATCCATAGTTGATGCATCAGATGGACGCCAAGTGATTGATATTATACCTCCCGGACCAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
GGGGACGCAGAAATCGTGCTTCAGGATCCATTACGTGTCCAAGGCCTT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr3B_998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ATCATGATATACGTAATAACTCAGACATCTATTTCAAATGCA
TATCCCATTTTTGTGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAAGCCCGTTGATATTGAAGTTCCCCAAGTTGTGCTTCCCGATAATGTATTTGAAGCAGTTCTTTGAATTCCTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATAGAAA-AAAGGGAGGGTTGAATGTAGGTGTTGTTCTTATTTTGCCCGAGGG
ATTCGAATTAGC-CCG-CTCGGTCATATTTCCCCTGAGTTAAAAGAAAAGATAGGAAATCTTGCTTTTCGGAGTTATCGT
CCCGATAAAAAAA---TTCTTGTGATAGGCCATGTTCCCAGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCACA
GG-TCTTGCTATGAAGAAAGATGCTCATTTATTAAAACATGCCATATATGTA-GGGGGAACCGAGGAAGAGGACAGATGT
ATACTGATGGTAGCAAGAGTAACAATACAGTCTATAATGATATGTCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
AAGGGGGGGGGGGTATGAAATATCCATAGTTGATTCATCAGATGGATGCTAAGTGATTGATATTATACCTCCCAGACCAG
AACTACTTGTTTCAGAAGGGAAATCCATAAGGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
GGGGACGCAGAAATCGTGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTGTTCTTCTTCGCATCCATTATTTTGGCACT
TTTG----TTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATT--ACAAAATGAATTTCTAGGTCCCGGGATTTCTT
ACCATCAAGTTGGTAAAAAGCCTCGATTTATTGGCAATTGCTATAATTATCTATGATATATTTTGGAAATCCCTTTTT--
------------------AGGCTATTTTTTGTTTACGAGATGTCTGAAATTCCTTATTTATATCTCATGCAAAAGAAGAG
AATCCAAGGAAAAGGCGAGAACAATAAAATTAAAATTTCTTCCTTTTCGGAGGGATTGCATGTCTTCTTAACCGTCTATT
CGGCACAAGAAAAAGGCTTTTTCTTGTGCCGATTCTTCTTGTATCAAAATAAGAATCCTTTTTCTTCCTAATT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr1D_998
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ATCATGATGTACGTAATAACTCGGACATCCATTTCAAATGCA
TATCCCATTTTTGCGCAGCAGGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGC
TAGCAGGCCCGTCGATATTGAAGTTCCCCAAGCTATGCTTCCCGATACTGTATTTGAAGCAGTTCTTCCAATTACTTATG
ATATGCAATTGAAACAAGTTCTTGCTAATGGAAAAAGAGGGAGGGTTGAATGTAGGGGCTGTTCTTATTTTACCCGAGGG
ATTCGAATTAGCGTCGCCC-GATCGTATTTCCCCTGAGTTAAAAGAAAAGATAGGAAGTCTTGCTTTTCAGAGTTATCGT
CCCGATAAAAAAA-CATTCTTATGATAGGCCCTGTTCCCAGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACAAAGAAAGATGCTCATTTGTTAAAATATCCCATATATGTAG-GGGAAACCGAGGAAGAGGACATATCT
ATCCTGATGGTAGCAAGAGTAACAATACAGTCTATAATGCTACGTCAACAGGTATAGTAAGAAAAATATAAC-------A
AAA----AGGGGGTATGAAATATCTATAGTTGATGCATCAGATGGACGCCAAGTGATTGATATTATACCTCCCGGACCAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCAACCATTAACAAGCAATCCTACTGTGGGAGGTTTTGGTTAG
GGGGT-GCAAAAATCATGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTGTTC------------GTTATTTTGGCACA
AG--TTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTCCGAAATGAATTTCTAGGTCCCGGCATTTCTC
ACCATCAAGTTGGTAAGAAGCTTCGATTTATTGGCAATTGCTAGAATTATCTATGATCTATTTTGGAAAT--TTTTTT--
-------------TGTTTAGACTATTTTTTGTTTATGAGATATCCGGAATTCCTTATTTATATCCCATGCAAAAGAAGAG
AATCCAAGGCAAAGGCGAGAACAATAAAATTAAAATTTCTTCCTTTTCGGAGGGATTGCGGGTCTTCTTAATCGTCTATT
CTGCACAAGAAAAAGGCTTTTTCTTGTGCCGATTCTTCTTGTATCAAAATAAGAATCCTTTTTCTTCCTAATT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr5A_1266
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TTTTGCCCGAGGG
ATTCGAATTAGCACCGCCC-GATCGTATTTCCCCTGAGTTAAAAGAAAAGATAGGAAATTTCGCTTTTCAGAGTTATCGT
CCCGATAAAAAAAACATTCTTGTGATAGGCCCTTTTCCCGGTAAGAAATATAGTGAAATTGTCTTTCCCATTCTTTCCCC
TGATCCTGCTACGAAGAAAGATGCTCATTTCTTAAAATATCCCATATATGTAGGGGGAAACCGAGGAAGAGGACAGATCT
ATCCTGATGGTAGGAAGAGTAACAATACAGTCTATAATGCTACGTCAACAGGTATAGTAAGAAAAATACTACGTAAAGAA
A-GGGGGGGGGGGTATGAAATATCCATAGTTGATGCATCAGATGGACGCCAAGTGAGTGATATTATACCTCCCGGACCAG
AACTTCTTGTTTCAGAGGGGGAATCCATCAAGCTTGATCAACCATTAACAAGCAATCCTAATGTGGGAGGTTTTGGTCAG
GGGGACGCAGAAATCATGCTTCAGGATCCATTACGTGTCCAAGGCCTTTTGTTCTTCTTCGCATCCGTTATTTTGGCACA
AG-TTTTTTTGGTTCTCAAAAAGAAACAGTTTGAAAAGGTTCAATTGTACGAAATGAATTTCTAGGTCCTGGGATTTCTT
ACCATCAAGTTGGTAAAAAGCCTCGATTTATTGGCAATTGCTAGAATTATCTATGATCTATTTTGGAAATCCTTTTTT--
-------------TGTTTAGACTGCTTTTTGTTTATGAGATGTCTGGAATTCCTTATTTATATCCCATGTAAAAGAAGAG
AATCCAAGGCAAAGGCGAGAACAATAAAATTAAAATTTCTTCTTTTTTGGAGGGATTGCAGGTCTTCTTAATCGTCTATT
CGGCACAAGAAAAAGCCTTTTTCTTGTGCCGATTCTTCTTGTATCAAAATAAGAATCCTTTTTCTTCCTAATT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>SNPs
SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
------------S--SSSSSS--------------------------------------------S--------------
----------------------------SSSSSSSSSS------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_443
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TTCCTGTTCACCGACACTCG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>reverse_2388
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CCATTACGTGTCC
AAGGCCT---------------------------------------
