>input_sequence_80798
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----------------------------------------------------------------ATGGGAGGGCGCGGCA
AGAAGCGTGGTATGGAACAGGGAGTGCTCCCCGAGATTACGCATAGTTTTAC---------TAGTAGTTGTTCATGGCGG
TTCTGATTTGTTTCTGGTTTTGGTTTCAGGTGGTGCGAAGGGGGCCGGCCGTGAGGGCAACGGGGAGAAGCCGGCGTCGG
ACGGGAGCAGCGCGGTGCCGACGGCCAACGTCGTGCCCGTGACAAGGCGGGTGCAGCCGTCGAACGTCAAGATCGCCGAG
TCCGCGAAGCAGCTCACCCACGACTGCGCGGCCGAGTTCGTTTTCAGCCGCAGGGCGCGCCCTCCTGCGCGGCCGGCGAT
GACGGCGGCCGTGTCGCCTGGCGCACCAGTGTTCACCGACGAGGAGCTGGAGTTCCTCCAGTCGGTAATTCCTCCGCCGC
CGGGCGGATATTAG------------------------------------------------------------------
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>chr6D_1_TraesCS6D01G268200
ACACCATACATTTATGATGTGTTAATGTGCTAGATTTTTTTTAGATTTTTTAAAATGTTTTA-GGCATCCGGTGCATCGG
TAGCACCACAATTACGAGTGCAACGGATACATTCCCGTTGGGACGAGGCCCCCGTTCCAGTTGATAGAGAAGCGAGACAC
ACAAGTCGGCTACGCAAGCGGTTTCCGATCTCTTTAATTTGTACTAGGCGGCAACGGATGGGAGAACGCGAGCAACGGGA
CGCGCCGGCGCCGAACGCCTACGCACCCTCATCGGCGCGTACCCAACCACCTCTGGCTCATTGACGTCGTACGTCGTCTT
CCTCTCTTCGCTCAGCAGGATAGTAATCACTTGCTAAAGAAGAAAAGATTC--TGTTAATCGCCGCGCGTCTCGCCGGTA
CGGT--AATCCCTTCATCCGCGAATAAGTGTATATTAGGCTTTAAAATTTATTCAT--AAAAGAGTGTACTTCTATCTTT
TCAGTGCATTTCAAAGTAGAAAAAA--TACTTCTCTCTCATCATAAGGTAATCAAGAACAATACCATTCA-ACACATGAT
CTCCTTAATTTCTACATAC----AACTTATTAAAGATTGGATAATTAAAGAGAAGAGAGATAGTGGTTTGCATCTTCCTA
ATGCATTTTTCACTCTATACTTCATAATTTGTTCTAGTAAAA-AAAATATGTACATTTATTCGTGGAGGGAGGGAGCAGG
TGAGAAGCGAACAAAGGAGCACACCGGTGCGAGGGTATCGACTTTAAAGCCGGCCCCTGCCCTGCCCCGTAACGCATGCA
TGGCTCGCGGGAACTGCAATGTGGCAGCCTCACCTCGTTCTCTGCGCGACACGGCGGTACCATGCACCTTGGCATGGCAC
CGTGGACGTGCGTCCAGACTGGCGCAGCCCAGCCCGCGGACACCTATAAATG--GGTGCCCAGGCCACAAGCCGCTCTCA
TCACAAGTTCACAACGCACACAC--TGAGTAAGTGTGTAAGTAA-----GTGACAGATTGAACAATGGGAGGGCGCGGCA
AGAAGCGTGGTATGGAACAGGGAGTGCTCCCCGAGATTACGCATAGTTTTAC---------TAGTAGTTGTTCATGGCGG
TTCTGATTTGTTTCTGGTTTTGGTTTCAGGTGGTGCGAAGGGGGCCGGCCGTGAGGGCAACGGGGAGAAGCCGGCGTCGG
ACGGGAGCAGCGCGGTGCCGACGGCCAACGTCGTGCCCGTGACAAGGCGGGTGCAGCCGTCGAACGTCAAGATCGCCGAG
TCCGCGAAGCAGCTCACCCACGACTGCGCGGCCGAGTTCGTTTTCAGCCGCAGGGCGCGCCCTCCTGCGCGGCCGGCGAT
GACGGCGGCCGTGTCGCCTGGCGCACCAGTGTTCACCGACGAGGAGCTGGAGTTCCTCCAGTCGGTAATTCCTCCGCCGC
CGGGCGGATATTAGCGGTGCGGCGGGCAAGCTGGTCGGCCACAGGCGCAGGCGCTACCACCTGCGGGGCATGGCTATAAA
TGTTGTGTTGTTTTGCTTGAAGAAAAATCCCGATGTATCCAATAAGACAATAATACAT---ACATCGGTCC---CAAATT
ACTTGTCTTAAATTTTTCTAGATACGGATGTATCGAACATTAAAACATGTCTATATATATCCGTATCTAGATAAATGTAA
GACAACTAATTTAGGACGAAGTGAGGGAGTACTAATGACATATTCAGAACTG-TCTTTG--TGTGAATGTCTTCGGATAG
GAACTAGAAACAGAGCAAAAACAAATTAAAAA--TATGCTTAAG-TTCCAAAACTCCTGAAAAATAGAGTATATTTGGGA
GGTCACGTTCAACAAAAATGCAAAATTTGAAGTTCAAATTAAAATTCATTTGCAAGGTATAAAGAAACAAATCCAAGAAA
CGAATAGCGACAAACGGTGCATCACTATTTCTGTATATTTTTTCCTTACCTTCCAAATGAATTTGTGTCTGAACCTCAAT
TTAACCAATTTAAGAACATGATATCTCCACTATATCGTATTTTCTGAGAGATTT------AAGAAAACGTGGTATGTTTG
AAGTTTTCATTGCAACTGATTTCAACAAGATACTTTCTAGGAATACCTTACAACGTTAT--GTGGGAGAGGATGCACCCG
TGCCGACATGTGTCACACGCGAAAGAGCGAGTGCTTTTTCGTTAGTTCTATGATTTTTTTTCTTTCCCTTTTCCTTTAAT
CTTTTCACTTAGTTGTTAGTAGATAGTTTTAGCATCTTACGAAATGAAATATAATTCTTTTTTTTCAAATATTTAATATT
TATGTAAACCATACTTCAATGGTAATGTGTGTTGTCGGGTTCACT-----------------------------------
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------------------------------------------------------------ATAGGTTGCAACAGGTTAAT
ACAATCCTAAGGGCATCTACATTTGAGGGTATATTGGTGCTGGAATTTAGTCTACTTTGGGCCAACCCAATAGCAATTTT
CCAAATTCT
>chr6B_2
-CACCATACATTGATGTTGTGTTAATGTGTTAGATTTTTTTTTAATTTTCTAAAATGTCCTATGGCATTTGGTGCACCGG
TAGCATCACAATTACGGGTGCAACGGATATACTCCCGTTGGGACGAGGCTCCCGTTCGAGTTGATAGAGAAGCGAGACAC
ACAAGTCAGCTACGGAAGCGGTTTCCGATCTCTTTAATTTCTACTAGGCGGTAACGGATGGGAGAACGCGAGCAACGGGA
CGCGCCGACGCCGAACGCCTACGCACCCTCATCGGCGCGTACCCAACCACCTCTGGCTCAGTGAAGTCGCACGTCGTCTT
CCTCTCTTCGCTCAGCAGGATAGTAATCACTTG-----GACGAAAAGATTCAATGCTAATCACCGCGCGTCTCGCCGGTA
CGGTGTACTCCCTCCGTCTGAGAATAAATGTACATTTAGCTTTAACATTTATTCTT--AAAAGA--GTATTTTTATCTTT
TCAATGTATTTTAAAGTAGAAAAAAAATACTTTTCTCTTATCACACGGTAATCAAGACCAATAACATTCAGACATATAGT
CTTTTTTATTTCTACATGCACTTAGCTCATTAGGGGTTGAGTAATTAAAGAGAAAAGAGACAGTGATTTGCATCTTCCTA
ATGCATTTTTCACTTTATAATTCATAATGTGTTCTAAATAATTT--ATATGTACATTTATTCGTGGAGGGAGGGAGTAGG
TGAGAAGTGAA-----GAGCACACCGGTCCGAGGTTATCGACTTTAAAGCCGGCCCCTGCCCTGCCTCGTAACGCATGCA
TGGCTCGCGGGAACTGCAATGTGGCAGCCTCACCTCGTTCTCCGCGCGACACGGCGGTACCAGGCACCTTGGCATGGCAC
CGTGGACGTGCGTCCAGACTGGCGCAGCCCAGCCCGCGGACACCTATAAATG--GGTGCCCTGGCCACAAGCCACACTCA
TCACAAGTTCACAACGCACACACTAAGTGTGT---AGTAAGTAA-----GTGACAGATTGAACAATGGGAGGGCGCGGCA
AGAAGCGTGGTATGGAACAGGGAGTGCTCCCCGAGATTACGCATAGTTTTAC---------TAGTAGTTGTTCATGGCGG
TTCTGATTTGTTTCTGGTTTTGATTTCAGGCGGTGCGAAGGGGGCTGGCCGTGAGGGCAACGGGGAGAAGCCGGCGTCGG
ACGGGAGCAGCGCGTTGCCGACGGCCAACGTCGTGCCCCCGACGAGGCAGGTGCTCCCGTCGAACGTCAAGATCGCCGAG
TCCGCGAAGCAGCTCACCCACGACTGCGCGGCCGAGTTCGTTTTCAGCCGCAGGGCGCGCCCTGCTGCGCGGCCGGCGAT
GACGGCGGCCGTGTCACCTGGCGTGCCAGTATTCACCGAAGAGGAGCTGGAGTTCCTCCAGTCGGTAATTCCTCCGCCGC
CGGGCGGATATTAGCGGTGCGGCGTGCAAGCTCGTCAGCCACAGGCGCAGGCGCTGCCACCTGCGGGGCATGGCTATAAA
TGTAGTGCTGCTTTGCTTGAAGAAAAATCCCGATGTATCCAATAAGACAATAATACATTCAACCTCAGCCC---TGAATT
ATTTGTCTGAGATTTTTTTAAATACAGATGTATCTAACATTAAAATGTGTCTACATATATCTGTATCTAGACAAATATAA
GACAATTAATTTGGGACGAATGGAGGGAGTACTAGTGACATATTCAGAACCTCTCTATG--TGTGAATGTCTTCGGGTAG
GAACTAGAAACAGGGCAAAAACAAATTAAAAAAATATGCTTAAGTTTCCAAAACTCCTGAAAAATAGAGTATATTTGGGA
GGTCACGTTCAACAAAAATGCAAAATTTGAAATTCAAACTAAAATTCATTTGCAAGGTATAAAGAAACAAATCCAAGAAA
TGAATAGCGACAAATGGTGCGTCACTATTTTTGTATTTTTC-TCCTTACCTTCCAAATGTATTTGTGTCTGAACCTCAAT
TTAACCAATTTAAGAACATGATATCTCCACTATATCGTATTTTTTGAGTGATTTCTTTGAAAGAAAACGTGGTATGTATG
AAGTTTTCATTGCAACTGATTTCAACCAGACACTTTCTAGGAATACCTTACAACGTTATATGTGGGAGAGGATGCACCCG
TGCCGACATGTGTCACACGCGAAAGAGCGAGTGTTTTTCTATTAGTTTTGTGTTTTTTT--CTTTCCCTTTTCCTTTCAT
GTTTTCACTTAGTTGTTAGTAGATAGTTTTAGCATCTTACAAAACGAAACATAATTCTTTTTTGTCAAATATTTAATATT
TATGTAAACCATACTTCAATGGCACCGTGTGTTGTTAGGTTCATT-----------------------------------
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------------------------------------------------------------ATAGGTTGCAACAGGTTAAT
ACAATCCTAAGGGCATCTACATTCGAGGGTAT------------------------------------------------
---------
>chr6A_23
----------------------TAATGTGCTAGATTTTTTT--AGTTCTTTAAAATGTTCTATAACATCCGATGCACCGA
TAGCATCACAATTACGGATGCAACGGATACATTCTCGTTGGGACGAGGCTCCCGTTGCAGTTGATAGAGAAGCGAGACAC
ACAAGTCAGCTACGCAAGCGGTTTCCGATCTCTTTAATTTCTACTAGGCGGCAACGGATGGGAGAACGCGAGCAACGGGA
CGCGCCGACGCCGAACGCGTACGCACCCTCATCGGCGCGTACCCAACCACCTCTGGCTCATTGACGTCGTACGTCGTCTT
CCTCTCTTCGCTCAGCAGGATAGTAATCACTTGCTAAAGAAGAAAAGATTCAATGCTAATCACCGCGCGTCTCGCCGGTA
CGGTGTAATCCCTTCACCCGCGAATAAGTGTATATTAGGCTTTAAAATTTATTCACAAAAAAGT--ATATTTCTATTTTT
TCAATGTATTTTAAAATATT--AAAAATACTTCTCTCTCATCGCATGGTAATCAAGACCAATATCGTTCC-ACACATGAT
CTCCTTAATTTCTACATATCCTTAACTTATTAGAGATTGAATAATTGAAGAG--GAGAGATAGTGGTTTGCATCTTCCTA
ATGCATTTTTCACTCTATACTTCATAATCTGTTTTAGTAAAAAAAAATATGTATATTTATTCGTGGAGGGAGGAAGCAGG
TGACAAGCGAACAAAGGAGCACACCGGTGCGAGGGTATCGACTTTAAAGCCGGCCCCTGCCCTGCCCCGTAACGCATGCA
TGGCTCGCGGGAACTGCAATGTGGCAGCCTCACCTCGTTCTCCGCGCGACACGGCGGTACCATGCACCTTGGCATGGCAC
CGTGGACGTGCGTCCAGACTGGCGCAGCCCAGCCCGCGGACACCTATAAATG--GGTGCCCAGGCCACAAGCCGTTCTCA
TCACAAGTTCACAACGCACACACATTGAGTAAGTGTGTAAGTAA-----GTGACAGATTGAACAATGGGAGGGCGCGGCA
AGAAGCGTGGTATGGAACAGGGAGCGCCCCCCTCGATTACGCATAGTTTTAC---------TAGTAGTTGTTCATGGCGG
TTCTGATTTGTTTCTGGTTTTGGTTTCAGGTGCTGCGAAGGAGGCCGGCCGTGAGGGCAACGGGGAGAAGCCGGCGTCCG
ACGGGGGCAGCGCGCTGCCGACGGCCAACGTCGTGCCCCCGACGAGGCGGGTGCCGCCGTCGAACGTCAAGATCGCCGAG
TCCGCGAAGCAGCTCACCCACGACTGCGCGGCCGAGTTCGTTTTCAGCCGCAGGGCGCGCCCTCCTGCGCGGCCGGCGAT
GACGGCGGCCGTGTCGCCTGGCGCGCCAGTGTTCACCGACGAGGAGCTGGAGTTCCTCCAGTCGGTAATTCCTCCGCCGC
CGGGCGGATATTAGCGGTGCGGCGGGCAAGCTGGTCGGCCACAGGCGGAGGCGCTGCCACCTGCGGGGCATGGCTATAAA
TGTTGTGTTGTTTTGCTTGAAGAAAAATCCCGGTGTATCCAATAAGACAATAATATAT---ACACCGTCCGTTTCAAATT
ACTTGTCTTAAATTTATTTAGATACAGA---------CACTAAAACTTGTCTACATATATCTGTATTTAAACAAATGTAA
GACAAATAATTTGGAACGAAGGGAGGGAGTACTAATGACATATTCAGAGCTG-TCTCTCTATGTGAATGTCTTTGGATAG
GAACTAGAAACAGGACAAAAACAAATTAAA-AAATATGCTTAAGTTTCCAAAACTCCTGAAAAATAGAGTATATTTGGGA
GGTCACGTTCACCAAAAATGCAAAATTTGAAGTTCAAACTAAAATACATTTGCAAGGTATAGAGAAACAAATCCAAGAAA
TGAATAGTGACAAACGGTGCATCACTATTTCTGTATATTTTTTCCTGACCTTCCAAATGTATTTGTGTCTGAACCTCAAT
TTAACCAATTTAAGAACATGATATCTCCACTATATCATATTATTTGAGATATTT------AAGAAAACATGGTATGTTTG
AAGTTTTCATTGCAACTGATTTCAACCAGATACTTTCTAGGAATACCTTACAACGTTAT--GTGGGAGAGGATGCACCCG
TGCCGACATGTGTCACACGCGAAAGAGCGAGTGCTTTTCTGTTAGTTCTATGATTTTTT--CTTT-CCTTTTCTTTTCAT
CTTTTCACTTAGTTGTTAGTAGATAGTTTTAGCATCTTACAAAATGAAACATAATTCTTTTTTTTCAAATATTTAATATT
TATGTAAACCTGTTTCATAGTAGACTAAATTCTAGCACCAACATACTCTCAAATGTAGATGCTAGAATTTAGTCTACTTC
GGGCCAGCCCAATAGCAACCAGAGGGACATTTTAGTCTATGTTGGAATATAGATGCTGGAATTCAGCACCTACATACCCT
CAAATGTAGACTAAATTCCAGCACTTACATATGAGGATGTTTCATAATAGACTAAATTTCATAGGTTGCAACAGGTTAAT
ACAATCCTAAGGGCATCTACATTTGAGGGTATGTAGGTGCTGGAATTTAGTCTACTTTAGGCTAGCCCAATAGCATTTTT
CTAAATTC-
>chr6A_701
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---------------------------------------------------------------------------GCAGG
TGAGAAGCGAACAAAGGAGCACACCGGCGCGGGGGTGTCGAGTCTAAAGCCCGCCG------------GTAACGCCTGCA
TGGCTCGCCGGAGCTGCAATGTGGCGGCCTCAACTCGTTCTCCTCGCGCCACGGCGGCACCATGCACCTTGGAATGGCAC
-------GTGCGTCCAGGCTGGCGCAGCCCAGCCCGCGGACGCCTATAAATGCAGGTGCCCAGGCCACAAGCCGCTTCCA
TCCCA---TCACGACGCACACACACTGAGTAAGTGAGTAAGTAAAGTGAGTAACAGGTTGGACGATGGGAGGAAGCAGCA
AGAAACGTGGTATGGAAC------TGCTCCGGGAGATTACGT-CACGTTCAAAACCAGAGTTACTAGCTGTTCATGGTAG
T-----TTTGTCACTGGTTTGCGTTTCAGGTGGGCAGC---------GCGGCGAGGGCGACGCGGAGAACCCGGCGGCGG
AGGGGGGCAGCGCGCTGCCGATGGCCAACGTCGTGCGCCTGATGAGGCGGGTGCTGCCGTCGAACGTCAAGATCGCCGAG
ACCGCGAAGCAGCTCACCCACGACTGCGCGGTCGAGTTCGT---------------------------------------
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>chr6D_703
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-----------------------------------------------------------------------------AGG
TGAGAAGCGAACAAAGGAGCACACCGGCGCGGGGGTGCCGAGTTTAAACCCCGCCG------------GTAACGCCTGCA
GGGCTCGCCGGAGCTGCAATGTGGCGGCCTCAACTCGTTCTCCGCGCGCCACGGCGGCAGCATGCACCTTGGCATGGCAC
-------GTCCGTCCAGGCTGGCGCAGCCCAGCCCGCGGACGCCTATAAATGCAGGTGCCCAGGCCACAAGCCGCT----
-CCCA---CCACAACGCACACACACTGAGTAAGTGAGTAAGTAAAGTGAGTAACAGGTTGGACGATGGGAGGGAGCAGCA
AGAAACGTGGTATGGAAC------TGCTCCGGGAGATTACGCCCACGTTTAAAACCAGAGTTACTAGTTGTTCATGGTAG
C-----TTTGTCACTGGTTTGCGTTTCAGGTGGGCAGC---------GCGGCGAGGGCGACGGGGAGAACCCGGCGGCGG
AGGGGGGCAGCGCGCTGCCGATGGCCAACGTCGTGCGCCTGATGAGGCGGGTGCTGCCGTCCAACGTCAAGATCGCCGAG
ACCGCGAAGCAGCTCACCCACGACTGCGCGGTCGAGTTCGT---------------------------------------
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>SNPs
S-----------S---S-------------------------SS---------------S----------------S---
-----S----------S--------------------------------S------------------------------
-------S--------------------------------S---------------------------------------
-------S------------------------------------------------------------------------
-------------------------------------------------------S-----S------------------
----------------------------------------------------------------SS---S----------
---S--S----S-------------------------------S-S-----------S-----S----------------
--------------------------------S------S----------------------------------------
----------------------------S---------------------------------------------------
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------------------------------------------S-------------------------------------
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--------------S-----------------------S----S----------S-------------------------
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------------------------S-------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------S-----------
-----------------S-------S--------S-----------S------S-------S---------S--------
-----S------S--------S----------------------------------S-----------------------
-------------S------------------------------------------------------------------
--------------------------------------S-----------------------------------------
S----------------------------------------------------------S--------------------
-------------------------------------------S------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------SS-------------------SS----------------S--
----------------------------------------S--------S------------------------------
----------------------S-S-----------S------S------------------------------------
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--------------------------------S-S-----------------------S---S-S----------S----
-S------S
>forward_168
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--------------------------------------------------------------------GAAGCGAGACAC
ACAAGTCG------------------------------------------------------------------------
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>reverse_1921
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CGAATAGCGACAAACGGTGC------------------------------------------------------------
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