>input_sequence_80767
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---------------------------------------------------ATGGCTCCCAAAACAAGGGCGACCAAGGA
TGCGGAAAAGACAGGAAAGGCGCCGGAGAAGTCGAAGAAGGCAGTGCCGACGCAGATGCGGAGGGAAAACACTTGTTTCC
CGCCCGCGTTGAAAGTCTCCGACCTCACGGCCCGGTACTCCTTCCAGTGGTCAGTGAAGACCAAGGACCATGAAGCTGTC
GAAGTGTTGCCCGCAAGTGTTCCTGCGGGCGCAGATAAGTTCGCATTCTTCACCGGATTTGTTTATTGTGGATTGCTCCC
TCCTTTCTCGGCATTCTTTGATGAGGTGATGCGGACCCGGAATTTTCTGGGGGTGGTGCCC-------------------
------------------AACGTGCCTCTGTTCCGCCATTTTTATTCACCGCAAATTGAAGGTGACGCCATCTCCGGTAG
CGTGACATGGATCTCCGCGCTGCCCGCTTGA-------------------------------------------------
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>chr7D_1_TraesCS7D01G310700
ATGCCCTTCAATGATATGACCGTTAGATGAGTAGATAATTTGGGACAGCTGGTGCATAGCATAGCAACGGTCGGAAATTT
GACTATCAAATTCCTCAGGGTTATCATGATCCTCACTTGTAGGCAATCCACACTGGCGAATTCCTAACTCCCCAGTCAGA
ACAAATTCCTCAAGGACGTCACCGAGCTGAACGTGTGCACAACTCGGAGGTGTCGTACGTTCGGTACTTGATCGGTCGGA
GCTAGAAGAAGTTCGACTACATCAACCGCGTTGTCAAACGCTTCCGCTTACGGTCTACGAGGGTACATAGACACACTCTC
CCCCTCGTTGCTATGCATCTCCATGGATAGATCATTGCGTGTGCGTAGAATTTTTTTGTTTTCCATGCAACGTTTCCCAA
CAAAGGTAACTTCTCGGCAGCCTGAGTCTTGATCTTGAGATGAT------CTTCTCGATGACCTGCCTCGAGGTCTTCTT
CAC---GGTATTA-TTCACCATGACTTGTGTATCTTGGGATGGATCTACCTTTTGCCATGCCTTTTCCGGCGTGGAGGCT
ACCACTTGCCGGTGCGTAGTCAGGGGTATAAACACCCGATGTTTACAACACTGACAGGAGCCCCTGGGCCGGGGCCAGGC
ACGTGTGCACAACGTTTGTCTAGGCTAGGCCCATTAACACGCACCGGCCTCCCCATGGCGAGTGGTAACTGCCACCCACT
ACCTTTTACTGTGTGCTGATGATAGCGGATCTTCGCATTCATTGCGAGATCGTGGGGGAGACGGAACAAGACACAAGTGG
GGACCGTGCGCCTAAAAAGGCGTGCCACGGTACGCGGTGAAAGGCCATCCCCCTCTTCTTCCCCATAAAAGGT-AATGTC
GGGAGCGTTACCGAATTCACCTATCCCCAATTCCATGTCCCACTGCTGCTGCTACCTTCGTCTTCCTCGCACCACTGCAC
CTCGCTGTTCCGCCCCGCTTCCGCCTCCCTCCATATCCCTTTCTCCTAGCCATGGCTCCCAAAACAAGGGCGACCAAGGA
TGCGGAAAAGACAGGAAAGGCGCCGGAGAAGTCGAAGAAGGCAGTGCCGACGCAGATGCGGAGGGAAAACACTTGTTTCC
CGCCCGCGTTGAAAGTCTCCGACCTCACGGCCCGGTACTCCTTCCAGTGGTCAGTGAAGACCAAGGACCATGAAGCTGTC
GAAGTGTTGCCCGCAAGTGTTCCTGCGGGCGCAGATAAGTTCGCATTCTTCACCGGATTTGTTTATTGTGGATTGCTCCC
TCCTTTCTCGGCATTCTTTGATGAGGTGATGCGGACCCGGAATTTTCTGGGGGTGGTGCCC-------------------
------------------AACGTGCCTCTGTTCCGCCATTTTTATTCACCGCAAATTGAAGGTGACGCCATCTCCGGTAG
CGTGACATGGATCTCCGCGCTGCCCGCTTGACCCTTGAGATGGTAGGCGATGACTTTCTTTGGCGCCGGATAGCCCCATT
GAAAAGGAGGAGCCCCCACTCCTTTGATTCAAAGGAATTCTATAGAATTTTTTGAGGATTGAAATCCTTTAAAAAATTTC
TTACGTTTGTCCTTTGATTCATAG-ATTGAATCCCACAGGAACTTTTTCAATGGAATCTTTTGTACTACATTTTATAGAA
AATCTAACATCCACTCCAACCTCTGTTTACAATTTCTTTGCTTTTCTCGTGAAATCAAACACTCCTTGCTAATCCTATAG
GATTCAAG-TGGGCATGATACTTCAATCCTATACTTTTTCTATTCCTATGTTTTCAAAATTCTGCGAATCAAAAAGGCCC
TGAAAAGGAGGAGCTATGTTTTCAAAATTCTGCTTTTTCTATTCCTTTGTTAATCATTTGCTTTACAAGGACGCTGCCGA
CACGATGCGGATCCGTCCCGGTCTCGCCAACATCCTATATGCCATTTTAATTCTCTACAGCAATCTCTTGAGTTGATTTG
CATGATGACGACAAATGATTAACAAAGAATAAAGCGATTGCTCATGAACGCAACAAAAGGATGTTTTCCGATGGATTATA
TCATTGCGCTACCAGTAGAGTTTAGAAGACCTATTGGACTGTACTCTGACATCTACGATGCACATCTAGAGTCAGAACTC
AGGAGCAGGCTGCAGTTCAAAGACTCGCCTAAATTGATCTAACTTTCAATGGAATTTGGCTACCCACATCCGTACCAAAA
TGATAGAACATTATCAGCCTTGTTTCAACGGTGCTCATCTC--CTAACTTAAGCTACAACATGCTTGCTACCCATGGAAC
ACCTCCTGAGTTTCGGACCTGTACACAGCGTCAGCTCTCGTTCTGCAGTCTGGCCTGATCTTGCAGAAACAGCAGCTGAA
GAGTCCCTTGCGAGGCCGCGGAGCTCTGTGCTTGTCGCGCGGCTGGGACTTCCGGGAGGGGGCGCACGCACCACA
>chr7A_403
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--AAGGTAACTTCTCGGCAGCCTGAGTCTTGATCTTGAGATGAT------CTTCTCGATGACCTGCCTCGAGGTCTTCTT
CTTCATGGTATTA-TTCACCATGACTTGTGTATCTTGGGATGGATCTACCTTTTGCCATGCCTTTTCCGGCGTGGAGGCT
ACCACTTGCCGATGCATAGTGAGGGGTATAAACACCCGATGTTTACAACACTGACAGGAGCCCTTGGGCCCAGGCCAGGC
ACGCGTGCACAACGTTTGTCTGGGCTAGGCCCATTAACACGCATCGGCCTCCGCGTGGCGAACGGTAACTGCCACCCACT
ACCTTTTACTGTGTGCTGATGATATTGGATCTTCGCATTCATTGCGAGATCGTGGGGGAGATGGAACGGGATGCAAGTGG
GGATCATGTGCCTGAAAAGGCACACCACGGCGTGCGGTGAAAGGCCAGCCCCC-CTTCTTCCCCATAAAAGAT-AATGTC
GGGAGCGTTGTTGAATTCACATATCCCCAATTCCATGTCCCGCTGCTGCTGCTACCTTCGTCTTCCTCGCACCACTGCAC
CTCGTTGCGCCGCTT-GCTTCCGCCTCCCTCCATATCCCTTTCTCCTAGCCATGGTTCCCAAAACAAGGGCGACCAAGGA
TGCGAAAAAGACAGGGAAGGCGCTGGAGAAGTCGAAGAAGGCGATGCCGGCGCAGATGCGGAGGGAAAACACTTTTTTCC
CGCTGGCGTTGAAAGTCTCCGACCTCATGGCCCGATACTCATTCCAATGGTCAGTGAAGACCAAGGACCATGAAGCCGTC
GAAGTGTTGCCCACAAGTGTACCTGGCGGCGCAGATAAGTTCGCATTCTTCACCGGATATTTTTATTGTGGATTGCTCCC
TCCTTTCTCGGCTTTCTTTGATGAGGTGATGAGGACCCAGAATTTTCTAGGTGAGCCGTCTCTGGTAGATTGAAGGTGAC
TCTGTTCCGCCATCAGAAAACGTGCCTCTGTTCCGCCATTTTTATTCACCTTAGATTGAAGGTGACGCCATCTCTGGTAG
CCTGACATGGATCTCCGTGCTGCCCGCTTGACCCTTGAGATGGTAGGCGCTGACTTTCTCTGGCGTCGGATAGCCCCATT
GAAAAGGAGGAGCCCCCACTCCTTTGATTCAAAGGAATTTTATAGA-TTTTTGAAGGATTGAAATCCTTTGAAAATTTTC
CTACGTTTGTCCTTTGATTCATAGGATTGAATCCCACAGGATTTTTATCAATGAAATCTTTTGTACTACATTTTATAGGA
AATCTAACATCCACTCTAACATTTTTTTACAATTCCTTACTTTTCC-CGTGAAATCAAACACTCCTTGCTAATCCTATAA
GATTCAAGTTGGGCATGACACTCCAATCCTATACTTTTCCTATATCTGCGTTTTCAAAATCCTGCGAATCAAAGAGGCCC
TGAAAAGGAGGAGC-------------------------------------------------------------GCCGA
CACAATGCGGATCCGTCCCGGTCTCGCCAACATCCTATAATCCATTTTAATTCTCTACAGCAATCTCTTGAGTTGATTTG
CATGATGACGACAAATGATTAACAAAGAATAAAGGGATTGCTCAGGAACGCAACAAAAGGGTGTTTTCTGATGGATTATA
TCATTGCGCTACCAGTAGAGTTTAGAAGACCTATTGGACTGTACTCTGACATCTACGATGCACATCTAGAGTCAGAACTC
AGGAGCAGGCTGCAGTTCAAAGACTCGCCTAAATTGATCTAACTTCCAATGGAATTTGGCTACCCACATCCGTACCAAAA
TGATAGAACATTATCAGCCTTGTTTCAACGGTGCTCATCTCTCCTAACTTAAGCTACAACATGCTCGCTACCCATGGAAC
ACCTCCTGGGTTTCAGACCTGTACACAGCGTCAGCTTTCGTTCTGCAGTCCGGCCTGATCTTGCAGAAACAGCAGCTGAA
GAGTCCCTTGCGAGGCCGCGGAGCCCTGTGCTTGTCGTGCGGCTGGGACTTCCGAGAGGGGGCACACGCACCACA
>chr5A_410
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---------CTTCTCGGCAACCTTAATCTTGATCTTGGGGTGATCTAGTACTTCTCGATGACCAGCCTCGAGGACTTCTT
CAC---GGTATTTGTTCACCATGTCTTGAGTGCTTTGGGGTGGACCCATATTCTGCCAAGTCTGTCCAGGCTCAGAGGCT
GCTACTTACCGATGCGTGGTCAGGGGTATGAATACCCAACGTTCACTACACCGAGAGGAGCTCCCGGGCCTGGGCCACAC
-CGCGTGTAGAGCGCTTGTCTAGGCTAGGCCCATTAACACGCACTCGCATAAGCATGGTGAAGGGTAACTTCCACCCACT
ACTTTTGCCTACGTGTTGCTAATGGCGCATCTCTGCATTAAATGTGGGATCGTAGGGGAGATGGAACGAAATGGTAGTGG
GGGCATGCGACTAAAAAAATCACACCACGCTACGTAGTGAAGAGCCAGCCCCCATGCCTTCCCCATAAAAGGGCAATGGC
AGGTGCGGTGCTCAATTCACCCATTCCATTCCTTCTTCCCCACAGCCATCGCTGTCCTCATCATCCTTGCGCCACCT---
---------------CGCTTCCGCCTCCCACCAGATTCTCTTCCCCTAGCCATGGATCCCATGATGAGGGTCACTAGGGA
AGTAGAGAAGTCAGGGAAAGATCCAGAGAAGTCAAAGAAGGCGATTCTCACGCAGATGCGGAGGGAGAGTGCTTGTTTCC
CCCCGATGCTGAAGGTCGCCGATCTCATGGCCCGATACCCTTTCTAGTGGTCGTTGAATAGAAAGAACCATGACACTGT-
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>chr7B_1903
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--------------------------------TCCAATATGCCATGTTAATTCTCTACAGCGATCTCTTGAATTGATTTG
CATGATGACGACAATTGATTAACAAAGAATAAAGCGATTGGTCATGAACGCAACAAAAGGATGTTTTCCGATGGATTATA
TCATGT-GCTACCAGTAGAGTTTAGAAGACCTATTTGACTGTACTCTGACATCTAAGATGCACATCTAGAGTCAGAACTC
AGGAGCAGGCTGCAGTTCACAT------CTAAATTGA----ACTTTCAATGGAATTTGGTTACCCACATCCGTACCAAAA
TGATAGAACATTATCAGCCTCATTTCAACGGTGCTCATCTCCTT--ACTTAAGCTACAACATGCTTGCTACCCATGGAAC
ACCTCCTAGGTTTCGGACCTGTACACAGCGTCAGCTCTCGTTCTGCAGTCTGGCCTGATCTTGCAGAAACAGCAGCTGAA
GAGTCCCTTGCGAGGCCGCGGAGCTCTGTGCTTGTCGTGCGGTTGGGACTTCCGAGAGGGTGCGCACGCACCACA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS------------------------------------------------------------------------------
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-----------S----------------------------------------------------------S---------
---S------------------------------------------------S--------SS-----------------
-------------------------------------------------------------S-----S---SS-------
-----S--S------------SSS-----------------------S-----S--------------------------
---------S-S--------------------------------------------------------------------
----S--SS----SS----------------------------------------S------------------------
---------------S--------------------------SS------------------------------------
----S----------------------S------S-----S---------------------------------------
------------S-------S----SS-------------------------------S-S-------------------
------------S------------------S------S---------S--S-S-SS-S-S-------------------
--------------------------------------------------SS-S--------------------S-----
-S---------------S-------------------------------S---------S-----S--------------
---------------------------------------S------S-----SS----------------S----S----
S----------------------------------------SS---S------S------------------------S-
----------------S---S-S-S---------S---SSS---S-S--------------------------------S
------------------S---S---------------S----SS--SS-----------S------------S------
--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
---S----------------------------------------------------------------------------
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--------S-----------------------------------------------------------------------
-------------------------------------S----------------S--------------------
>forward_289
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-----------------------------GTTGTCAAACGCTTCCGCTT-------------------------------
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>reverse_1411
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--------------------------------------------------GCAAATTGAAGGTGACGCCA----------
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>forward_334
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--------------------------------------------------------------------------ACTCTC
CCCCTCGTTGCTAT------------------------------------------------------------------
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>reverse_1435
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--------------------------------------------------------------------------CGGTAG
CGTGACATGGATCT------------------------------------------------------------------
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>forward_340
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CCCCTCGTTGCTATGCATCT------------------------------------------------------------
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>reverse_1898
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---------------------------------------------------------TTGCTTTACAAGGACGCTGC---
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