>input_sequence_80705
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---------------------------------------------------------------------------ATGGC
CACCGTATTGAGCAGCCTCCGCTTGCCCTTCTCCGTCTGCCCCGCCGCCCCTTCGGCGCCCATGG---CATCCCGCGTCG
CGCTCCCGCCGTCGTCGACGGCCGCCAGGGGCATGAGGCTCCGCGCGCAGGCGACGTACAAGGTGAAGCTGATCACGCCG
GAGGGCGAGGTGGACCTCGAGGTCCCCGACGACGTCTACATCCTCGACCACGCCGAGGAGGAAGGGATCGACCTGCCCTA
CTCCTGCCGCGCCGGCTCCTGCTCCTCCTGCGCCGGGAAGGTGGTCTCCGGCCAGCTGGACCAGTCCGACCAGAGCTTCC
TCGACGACGACCAGATCGAGGCGGGGTGGGTGCTCACCTGCGCCGCGTACCCCACCTCGGACCTCGTCATCGAGACCCAC
AAGGAGGAGGAGCTCACCGCTTGA--------------------------------------------------------
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>chr7D_1_TraesCS7D01G322100
TTTTCTATCATAATAGTGATTTTACAAACCCCCGACATGTTGTGTTTGGCGTGTACACTGTAATAGATTGATGGGCCTAC
CAGAAAAATAAGACAATTGCTAGGGATGTACGCCTTCGTTTTTATTTACTCCTCATATTACCTTTGATTGAAATCAAACT
TTATAAAGTTTGACCAAGTTTGTAGGAAACAATATGAACATTTAACATAAAAAACCTATATCACGTGACAATATATTCAA
TGATGAATCTAATGGTATTGATTTGGTGGTGTATATGAATCTAATGGGTATGCAAAAGTACATACAAGTACAATGTGATG
TCCAACTGAATCGTAAAACATTTGTGAATTTTGAACCAAAGTTTGTTTGATTGTACTCCCTCCGTTTCATATTAGTTGTC
AAGTGGTTTGAGTCAATGCAAACTTCTTATAT-AATGCAAGCGCAATGAAGAAATTCCAATAGGACACACCATTGGGGAT
CAAATAACCACCATCGCAAACAGTTATATGA-AATCCACTGAATGAAACAGGCCCAACAACTTAGAAATTCCTTGCAATA
TATACTCT-----------------------TACAAGGCTAGCTTTTTTCTCTTA-AAAAAGACA----AATGGAGAAAA
ATGAGGGAAGATAACACTTGGCACCCGGTGGGTGAAACACATCAGAATACTATTTCAAATTAATCTTTAACCAAAATCTC
AATACAAAATACCCCAAGCATACAACCAAGACCACGCATGCACCCCATTGCATGGCCTCCACACGCCTTGTCGATATCCA
TGGTGGCATCTAGCGCCGGCCGGGTGGCACGGATCCCCCTT-CACTCCCTCAGCGTGTGAACGTGGACGCTCCAACCCAA
CCGTTCCCCGTGTTTAGGATAAGCTGCCCAGCTCGTCCGCCCTTCTTATTGCCGCTGCTTCTCATCTCACACGCTCCAAC
ACCATCCTCTCCTACACCGAG----TATCCGCCTACGGAGTAGTACTTCCCAAGCTAGCTCGGAACTCCGCCGCAATGGC
CACCGTATTGAGCAGCCTCCGCTTGCCCTTCTCCGTCTGCCCCGCCGCCCCTTCGGCGCCCATGG---CATCCCGCGTCG
CGCTCCCGCCGTCGTCGACGGCCGCCAGGGGCATGAGGCTCCGCGCGCAGGCGACGTACAAGGTGAAGCTGATCACGCCG
GAGGGCGAGGTGGACCTCGAGGTCCCCGACGACGTCTACATCCTCGACCACGCCGAGGAGGAAGGGATCGACCTGCCCTA
CTCCTGCCGCGCCGGCTCCTGCTCCTCCTGCGCCGGGAAGGTGGTCTCCGGCCAGCTGGACCAGTCCGACCAGAGCTTCC
TCGACGACGACCAGATCGAGGCGGGGTGGGTGCTCACCTGCGCCGCGTACCCCACCTCGGACCTCGTCATCGAGACCCAC
AAGGAGGAGGAGCTCACCGCTTGAATTCACTGA-TTTGTTTAGTTCGACCCGTTTCCACCGTGCGCGTGTACCATGCACG
ACGTACGAACTGTATCAGGATATTGAGGAG---------------------TAGTACATGCTGCTGTGGTCGGATTTTGA
TTGCTT------ATTACTGCCCAGTGTTAATTTTCTCAAGAACATTGCTATACACACGACGCCATGTGCACGATTTATGG
ACGACACTGTTAATCAAGCTGTTGGTGTTAGAAAGCAAACTTCAGTACATCGTCAGATTTTGCATCGTCCCTGAATCGGC
CACGCATCTGTCGTTCACAAAGTAGTTTCGTTTTCTCAAGTCAATCAAGTAATGAAAAGAGATGAGATTGTACTCCATGT
CTCCGTTACGCGTGCCTCGCGATTTACTTATGATTTAGATATACTATATACTCCGTTCCGTCCTTTTTAATCTGCACATA
CATTTATGCGAAGTCAAAGTATCTCTACTTTGATCAAACTTATAAAAAAATATCAATTTAATCAAATTTTATAAAGTTTT
ACTTGACATAAATCTAATATACAAAGTAAAAAGGGACCCACGGGAGAATGAGATTGTACTTATGATTTAGACCTGATTTA
GACAGACTGATATGTGCTTGAATTGGGCTCGCAAATCTAGCTAGATTGATCGTCGAACAAATTTACTGAAAAAGGGAAAA
TAAATAAATAAGGGCCGTGCTATGCGTTGGCATGGTCGTGAGCCATTCGATATGCGCACGCGCGTTCATCGCAACATAAT
TCTTGTTGCACGTGTTGTGACAGAGGAACTCACATGCGCGTGCGTTGGGCTGGTGGTTGCCGTCCCCACCGGCGATCCAT
CGAAGATCTCCGCTACCCCACATAGACTGTCTTCTCCCTTCCTTGTCCTCCTCCCACTCACCGCTCCCTCTCTCCATGCA
GGAATGTGCCCGACCAAGAGCATAGGCGAGCATCGCCATGGCCTTGTGCCGCCCATTGTCGTTTGCCTCGCCTCGACGGG
GAACACCACCAT
>chr7A_399
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------------------------------------------------------------------------------TC
AAATTGTTTGAGTCAATGCAAATTTCTTATATTAATGCAAGCACAATGGAGAAACTCCAATAGGGTACACCATTGGGGAT
TAAATAACAACCATCACAAAAAATTATATGGGAATCCTCTGAATGAAAGAGGCCTATTAATTCAGAAATTCGTTACAATA
TAAACATTCTTATATTTCTTTACGGAGGGAGTATAAGGCTCCCCTTTTTCTCTTATAAAAAGATA----AATGGAGGAAA
ATGAGGGAAGCT--------------GGTTGGCGAAACACGTCACAAAATTATATCAAATTAATCTGTAACCAGAACCTC
AATGCAAAATACCCCAAGCACACAACCAAGACCACGCATGCACCCCATCGCATGGCCTCCACACGCCTTGTCGACATCCA
TGGTGGCATCTACCGCCGGCCGGGTGGCACGGATCCCCCTTCCACTCCCTCAGCGTGTGAACGTGGTCGCTCCAACCCAA
CCATTCCTCATGTTCAGGATAAGCTGCCCAACTCGTCCGGCCTTCTTATTGCCGCTGCTTCTCAGCTCACAAGCTCCAAC
ACTATCCTCTCGTGTCTCGTCGAGCTATCTGTCTACGGAGTAGTACCTCCCAAGCTAGCTCGCCGCTCCGCCGCGATGGC
CACCGTACTGAGCAGCCTCCGCTTGCCCTTCTCCATCTGCCCCGCCGCCCCTGCGGCGCCCATGGCGGCATCCCGCGTCG
CGCTCCCGCTGTCGTCGACGGCCGCCAGGGGCATGAGGCTCCGCGCGCAGGCGACGTACAAGGTGAAGCTGATCACGCCG
GAGGGCGAGGTGGACCTCGAGGTCCCCGACGACGTCTACATCCTCGACCACGCCGAGGAGGAAGGGATCGACCTGCCCTA
CTCCTGCCGCGCCGGCTCCTGCTCCTCCTGCGCCGGGAAGGTGGTCTCCGGCCAGCTGGACCAGTCCGACCAGAGCTTCC
TCGACGACGACCAGATCGAGGCGGGGTGGGTGCTCACCTGCGCCGCGTACCCCACCTCGGACCTCGTCATCGAGACCCAC
AAGGAGGAGGAGCTCACCGCTTGAATTCACTGATTTTGTTTAGTTCGACCCGTTTCCACCGTGCGCGTGTACCATGCACG
ACGTACCAACTGTACCAGGATATTGAGGAATTACAAAGTA-------TAATTAGTACTTGCTGCTGTGGTCGGATTTTGA
TTGCTTTTGCTTATTAATGCCTAGTGTTCATTTTCTC-------------------------------------------
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-------------------------------------AAGTCAATCAAGTAATGAAAAGAGATGAGATTGTGCTCCATGT
CTCCGTTACGCGTGTCTCGCGATTTACTTATGATTTAACTC------ATACTCCATCTGGTCCTTTTTAGTCTTCATATA
AATTTATGCGAAATCAAAGTATCTCTACTTTAATCAAA------------------------------------------
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>chr7B_555
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----------------------------------------------------------------------------AAAA
TGTACTCA-----------------------TATAAGGCTAGCTTTTTTTCCTGTTAAAAAAGATAAATAATGGAGAAAT
ATTTGGGAAGATAACACTTGGCACTCGGTTGGTGGAACACGTCACAATATTATTTCGAATTGATCTGTAACCAGAATCTC
AATGCAAAATACCCCAAGCATACAACCGAGACCACGCATGCACCCCATCGCATGGCCTCCACACGCCTTGTCGATATCCA
TGGTGGCATCT-GCGCCGGCCGGGTGTCACGGATCCCCCTT-CACTCCCTCAGCGTGTGAACGTGGACGCTCCAACCCAA
CCGTGCCCCGTGTTCAGGATAAGCTGGCCGGCTCGTCCGCCCTTCTTATTGCCGCTGCTTCTCATCTCACACGCTCCAAC
ACTATCCTCTCCTCCACCGAG----TATCCGCCTACGGAGTAGTACCTCGCAAGCTAGCTCGCAGCTCCGCCGCAATGGC
CACCGTATTGAGCAGCCTCCGCTTGCCCTTCTCCGTCTGCCCCGCCGCCCCTTCGGCGCCCATGGCGGCATCCCGCGTCG
CGCTCCCGCTGTCGTCGACGGCCGCCAGGGGCATGAGGCTCCGCGCGCAGGCGACGTACAAGGTGAAACTGATCACGCCG
GAGGGCGAGGTGGACCTCGAGGTCCCCGACGACGTCTACATCCTCGACCACGCCGAGGAGGAAGGGATCGACCTGCCCTA
CTCCTGCCGCGCCGGCTCCTGCTCCTCCTGCGCCGGGAAGGTGGTCTCCGGCCAGCTGGACCAGTCCGACCAGAGCTTCC
TCGACGACGACCAGATCGAGGCGGGGTGGGTGCTCACCTGCGCCGCGTACCCCACCTCGGACCTCGTCATCGAGACCCAC
AAGGAGGAGGAGCTCACCGCTTGAATTCACTGATT-TGTTTAGTTCGACCCGTTTCCACCGTGCGCGTGTACCATGCACG
ACATTCGAACTGTATCAGGATATTGAGGAGTTGCAAAGTACAGTACGTAATTAGTACTTGCTGTTGTGGTCGGATTTTGA
TTGCTTTTGCTTATTAATGCCTAGTGTTAATTTTCTC-------------------------------------------
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-------------------------------------AAGTCAATCAAGTAATAAAAGGAGATGAGATTGTACTCCATGT
CTCCGTTACGCGTGCCTCGCGATTCACTTATGATTTAGAT----------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
--S-S-----------------S-------------------S-----S-----S---------SS--------------
S-------S------S----S-S-------S------S----------S-----S-SS--S-S--------S--S-----
---------------------------------S-----------------------------S----------------
------------------------S----S----------S---S----S----------------S------S------
---S--------------------------------------------S-------------------------------
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--------------S-----------------------------------------------------------------
--S----------S--------------------------------S---------------S-S---------------
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---------------------------------------------------------S----------------------
----------------S----S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------
----------------------------------------SSSSSSS-------S-SSS----------S---S--S---
S-----------S------------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_52
--------------------------------CGACATGTTGTGTTTGGCGT----------------------------
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>reverse_2096
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---------------GCTTGAATTGGGCTCGCAAA---------------------------------------------
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