>input_sequence_80683
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-------------------------------------------ATGGCACCCAAGAGCAACGCGACCCGGATGGCTGCGG
TTTTCGTGGTTCTTATGATCATGTCTTCCACCTTATCATCATCGTCCTGCTATGCACGTACAAGTAATAACATCTCCTGT
TGTTTTATT----CATGTGTTTCCAAATTTTGTTGATCTCTAGAGTTTGTATC-G---GGTATTTGGGTCCGTAAATTTA
TTAACAAAAAAAATCCATCACTATTTTTCCCTACATACATTGTACGTCA-------------------ATTCATTGCTCA
ATTTATGCCGCGACTTATATGGATCATCGATCGAACTTGCAGTTGAAGATGGAGTGGATTC------TCCAGTGTGCTTC
CATGTGGAAAAGTGCCAAGACCGTTGCCAGACTGCATGCAGCATCAGCGGCAAGCCCTCGACTGGAGCCTACTGCAAGAT
CGATCAGTGTTGTTGCGCCTAG----------------------------------------------------------
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---------------------------------------------------------------------------
>chr5B_1_TraesCS5B01G207700
TTCATTTTTAGATAGATACACCGAGGGTAACACGGGCATGACACACGCTCACGCAACGTCTACTCACGATGACAAGTGTC
AATGTGTCGTACATCTCCAGAAATGAAGAAGCAA--------------ACGACGAGAACATCGCGTCCTGCTGAAATTCA
TCAGGCTTTATTAACAAAACGCACAGGCTACATATATA------------------------------------------
---------ACCTGGTGCGTTGGGGGCTCATACTTGCTTCGCCTTGGTCCACACAAGTGCTACATAACCATGGT------
--------------------------------------------------------------------------------
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--------------------------------------------------------------TTCCATCCCGAGAGGCAC
CGACAATTGTAGATTTTGGACGGTCTAGGTTTGGAGCCCAGGCTACATCCCTCACCT-----------------------
--------------------------------------------------AGTCCTTGTGCATTTGAGGGGCGGAGAAGA
AATCTAGCCTCCGGTGTAATCGCCGTTAAGGTGGTTCTTCACAAGCGTTTAAACAAACACCTTTTGTGAATGTCACACAT
TTAAACAAACACATTCAAGTGTAGTAGTATCTGATTAAACATGGCAACTCCCAACATTGGACCTCGCTAAGGAATTGGTT
GTGTAGTACTCCTTGCATTCGCCTGAAGTTGAGTACAGTTCACCTTGTTCCTGGCAAATGTAGCGCTGTGAAAATTGCGA
ACCCAAATTAACTCGCA---AAAAAGAAGGAAGAAACACAACTACTGCATTTCGCGGAAATGGCACGTCCTTGCCTGTAA
TAATTCCAAAGATGCATCAAAACGTTGCGGAT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TTCCTTGCATTCG
CCTCCTAAATA---AAATACTAGT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCCCTA-------------------------------------------------------------
----------------------------AAAAAACTAGGCAAGATGCCGTTGTAAAAAAGG-------------------
----------------------------------------------------AAGAGGATACTA----CATATTTGGAAA
CCAATCCATTCCTGCCGGAAAATCAATATTTCTATTGATATAG--TAATATTTAATTCTAGCTTAAAAAATCTGGAAGGC
ATTTTAATGACAAAGATTTGATTCACCCTCTCTCCATATAAATGACCATACAAGGACCAGAGATT-ACCGTATCCTTAGG
CACACGGCAAAGAAATAAGTGATTCTCCATCGATCTCTCCGTCATGGCACCCAAGAGCAACGCGACCCGGATGGCTGCGG
TTTTCGTGGTTCTTATGATCATGTCTTCCACCTTATCATCATCGTCCTGCTATGCACGTACAAGTAATAACATCTCCTGT
TGTTTTATT----CATGTGTTTCCAAATTTTGTTGATCTCTAGAGTTTGTATC-G---GGTATTTGGGTCCGTAAATTTA
TTAACAAAAAAAATCCATCACTATTTTTCCCTACATACATTGTACGTCA-------------------ATTCATTGCTCA
ATTTATGCCGCGACTTATATGGATCATCGATCGAACTTGCAGTTGAAGATGGAGTGGATTC------TCCAGTGTGCTTC
CATGTGGAAAAGTGCCAAGACCGTTGCCAGACTGCATGCAGCATCAGCGGCAAGCCCTCGACTGGAGCCTACTGCAAGAT
CGATCAGTGTTGTTGCGCCTAGCATGATGCTTCTATTCTCGCACGAGCAGTAATTTTAT------TACAGCTTCTTACAA
ATGTAGCATTGGTTACCGAAAAAATTATAGAGAAAAGTCCCCTCAACTTGCCACTCGGTTTAGATTTCAACACTCAACTC
TAAAACCGGTAATCCAGCACCCTTAACTTCCCAGT-GGGTCACAAATCAACCCCCTACTCAGTTTTGACTGTGTTGA-CC
GGTTTTGGCTACGTTTACTGCTGACTGTACAACGCCACGTCAGCTTGGACTATGTCGAATTTTTGAAAGGTTATTTTCGT
GTGTTTAATGAAGGTGTGGTCCACGGGTCAGCTATAGATTAGCAGAGAGGGTTAGAATAAATGGGGGATTACCGTACGCT
GATCACATGGCTATGGGCACATCTCGCAGTGATCGACTGATCGTATCAAAGTTTTTTTTTAAAACGAAGACGTACGATGC
GTCTGGCTTTAAATTAATAAAGCCCACCGACAGGCAGCATCCAACAAGTTCACCACAGAAACTACAGCAGAAGGTAAGTG
GCCGAAGCC-AAAAGTACGGAACATGCAACCGGCCTGT--CTGATAGAGAAAGACAGCAACACTAGCACACAAGCAGCCA
GTCCAAAATATCACCACGAGCAGCATCTTAGTGGCGGGCTTCAAACTGAATCGTGCGGATCCGCTCCATGGCCTCCATCA
TCCGATATGCATCACGCGGTTCCCCCAAAGGTGTCCATGTCTGGAGAAACAAGTGGCATTTGAAAATAATATCAGCAGGA
TGGTTAGGGAACTTGTGTTCGATAGTCATCTTATTACGGATGGTCCATAGTGACCAGCACAGCGCCCCTACGCAATGCCA
CAGCACGCGCCCGAAGCTACCCCTATGAGCGAGAAGGATCCCACGTAGGTCTGAAGCCGTATGGGGATT-C-AGTTCTGC
GCAAACGCCTCACGGACGGCACTCCAAGCAAAACGAGCTAGGTGGCACTTGAAAAAGATGTGGTTAGCATCTTCA
>chr5A_1
TTCATTTG-AGGTAGATACACCGAGAGTAACACGGGCATGACACACGCTCACGCAACGTCTACTCAGGATGACAAGTGTC
AATGTGTCCTACATCTCCAGAAATGAAGAAGCCACAGCTGCCTGGCAGACGACGAGAACATCGCGTCCTGCTGAAAATTT
ATCAGGCT--TTAACAAAACGCATAGAACGTCAAACAGAGGAGTTGAAACTTGGTGGGTGGGTTGGTTTGTTTCAAAAAA
AAAAAAGATACTTGGTGCGTTGGGGGTTCAT-CTTGCTCCGCCCTGGTCCACACAAGTGCTACATAAGAGCAGACATACA
AATCCAGGCCCTCAAACGCCCATAGACGTGCCTGACATTGACCGGGCTTTGACACCCGCGCCCCTTATATTCGAACCCTC
AAAATCATGCAATTCATGCAAAGCTACGTAAACACGTAAACACAATCAACACACGCAGTTTATCGGATCAACTTTGCATC
GCCGGACAAAAGAAGCATAGTTTATCGGAGTTCAACGGCAAATCCATACTACGAACTTAAAACATAGTTAAAATATAAGC
ATAACGGGGAAGGGCGGAGGAAATCACCATTTTCTCATCGGCCCCTTCCCCTTCTGGTCGTCGGCGTGGCTGTGCCCCTC
CTCCGTGTACGCGTCAGCGTGCGGAGGTGCGTCGTTGTCGGAGCTGGAGGTGGAGCCGTCCGTCATGTCTAAGTCGGAGC
TGCACCTCATGTCCGACAGCCTACAAAGCAGGCGGTCCTGCTCCTTCACATGGCGGGCCGCCTTCGCCTTGGCCGCCACC
TCCTTGGTTGCCTCGCGCTCCGATAACTCGATGGCGAGTCGAAGCGCCATGGCATTCTTCTAGCAGAGGCACCACGCATC
CGTCTCCGTCATCGTCAGAGAGTGGCGGAGGACTGACGCGAGGAGACACGACCTTGGGATCCATCGGTGCGATCACGCAC
GAACGACAACGCCGACATCGCCTCCCCCTCTCCCTCGCCCGCTGCCGCTCACGCTGGGCTGCATGTGGCTCGGACTCGGT
CGTCCTCGTGCGCAGACCCTGGTGCAGGCCCGAGGACCCAGCGATGGCCGAGTACCACTTCTGGGCCAGAGGATGATGGA
GATGGGCGGCGTACTTGGTGGAGCGGAGCGGAGCTGCCCAGGCGTGCCCATATCCATATCATATTTGGGCTGGATATGAG
GGGTGTCGGTCAGCCCGGGCATTTGACACCCGTTTGAGGCCATCCGTTTGAGTCAGATTTTGATGGCTGGTCAGTGACAA
ACAGGCCGCTTGAACGTTTGAAGCCGGTTTGAGGCACCCGGACGTACATGCTCTAACCATGGTTCCATCCTGAGAGGCAC
CGACAAATGTAGATTTTGGATGGTTAAGGTTTAGAGCCCAGGCTACATCCCTCACCTCTAGTCCTCGTGCATTTGAGTGG
CAGATTTTGGATCGTTAAGGTTTAGAGCCCAGGCTACAACCCTCACCTCTAGTCCTTGTGCATTTGAGTGGCGGAGAAGA
AATCTATCCTCCGGTGTTAGCGTCATTAAGGTGGTTCTTCACAAGCATTTAAACAAACACCTTTTGTGAATGTCACACAT
TTAAACAAACACATTCAAGTGTG---GTATCTGATTAAACATGGCAACTCCCAACATTGGAC------------------
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>chr5D_285
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-----------------GGATGGTCAAGGTTTGGAGCCCAGGCTACATCCTCAC--------------------------
------------------------------------------------CTAGTCCTTGTGCATTTGAGGGGCGAAGAAGA
AATCTGTCCTCCGGTGTTGGCGTCATTAAGGTGGTTCTTCATAAGCATTTAAACGAACACCTTTTGTGAATGTCACACAT
TTAAACAAACACAT-CAAGTGTAGTAGTATCTGATTAAACATGGCAACTCCCAACATTGGACGTCACCGTGGAATTGGTT
GTGTAGTA-------------CCTGAAGTTGAGTACAGTTCACCATGTTCCTGGCAAATATAGCACTGTGAAAATTGCGA
ACCCAAATTAATTAACTCGCAAAAAAAAGGAAGAAACACAACTACTGCATTTCGCGGAAATGGCACATCGTCGCCAGTAA
TAATTCC-AAGATGCATCAAAACGTTGAATATTTCCTTGCATGGTACCTCTTATCTTTGCCATCCATTTATGCATCAAGA
TCCATGCAGACACATTTGTCTTTTTTGTTTCTCTCAAATGACACAACATATAATCTTCAAATTTTGCAGAACAACAATAC
ATTCTAGGAAAAATACTTTCAGATTTTTTCATGCATTTTAAATACTTGGAATAATATTTTTATTCAAAGAAAATCTCATT
TTATATATTTATATCAGAACAAAAAATCTGAAAGTTTTTTCACACATTGATGTTCTAATATTTGTTCGATCTGCAAAGTT
TGAAGTTCATATGTTGTTTCATTTTTGAGAAACAAAAATGAGAAATCTTCTTGTTGTTAGTTAATTGAAGAGTACGGATC
TCAAAGCAAGGCTGGAGGGTTGAGGATAAGAGGTTCCATGTAGCCTGAGCTACAATGGAACTTTGTGTTCCTTGCATTCG
CCTCCTAAATA---AAATACTAG---------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------GCAAGATGCCGTTGTAAAAA--G-------------------
----------------------------------------------------AAGAGGATACTA----CATATTTGGAAA
CCAATCAATTCCTGCCGGAAAATCAATATTTCTATTGATATAG--TAGTATATAATTCGAGCTTTAAAAATCAGGAAGGC
ATTTTAATGCCAAATATTTGATTCACCCTCTCT--ATATAAACGACTATACAAGGACCAGAGATT-ACCGGATCCTTAGG
CACACGACAAAGAAATAAGCGATTCTCCATCGATCTCTTCGTCATGGCACACAAGAGCAACGTGACCCGGATGGCTGCAG
TTTTTGTGGTTCTTATGATCATGTCTTCCACTCTATCATCATCTTCCTGCTATGCACGTACAAGTAATAACATCTCTTGT
TGTTTTCTT----CATGTGTTTCCAAATTTTGTTGTTCTCTAGAGTTTGGATC-G---GGTATTTGGGTCCATAAGTTTG
TTAAC---AAAAATCCATCACTACTTTTCCCTACATACATTATACGTCA-------------------ATTCATTGCTCG
ATTTATGTCGGGACTTATATAAATCATCGATCGAACTTGCAGTTGAAGATGGAGTGGATTC------TCCAGTGTGCTTC
CATGTGGAAAAGTGCCAGGACCGTTGCCAGACCGCATGCAGCATCGGCGGCAAGCCCTCGACTGGAGCCTACTGCAAGAT
CGATCAGTGTTGTTGCGCCTAGCATGATGCCTCTATTCTCGCTCGAGCAATAATTTTAT------TACAGCTTCTTACAA
ATGTAGTATTGGTTACCG-AAAAATTATAGAGAAAAGTCCCCTC---TTGCCACTCGGTTTAAATTTCAACCCTCAACTC
TAAAACCGGTAATGCAGCACCCTTAACTTCCCACTCGGTTCACAAATCAACCCCCTGCTCAGTTTTGGCTGTGTTGA-C-
GGTTTTGGCTACGTTTACTGCTGACTAGACAACGCCACGTCAGCTTGGACTATGCCAAATTTTTGAAACGTTATTTTCG-
--------------------------------------------------------------------------------
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>chr5A_536
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---------------------CCTGAAGTTGAGTACAGTTCACCATGTTCCTGGCAAATATAGCATTGTGAAAATTGCGA
ACCCAAATTAACTCGCAG--AAAAAGAAGGAAGAAACACAACCACTGCATTTCGCGGAAATGGCACGTTGTTGGCAGTAA
TAATTCCAAAGATGCATCAAAACGTTGAGGAT------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------TTCCTTGCATTCG
CCTCCTAAATAGTAAAATACTAGG--------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------CCCCTA-------------------------------------------------------------
----------------------------AAAAACCTAGGCAAGATGCCGTTGTAAAAAAAGAAAAAGAAGAGGATACTAC
ATATTTGGGAAATCAATCAATTCCTGCTAGGCAAGATGACGTTGTAAAAAAAAAGAGGATACTA----CATATTTGGAAA
CCAATCAATTCCTGCTAGAAAATCAATATTTCTATTGATATAGAGTAGTATTTAATTCCAGTTTAAGAAATCAGGAAGGC
ATTTTAATGCCAAAGATTTGATTCACCCTCTCTCTATATACACGACTATACAAGGACCAGGCATT-ACCGTATCCTTAGG
CACACGGCAAACAAATAAGCGATTCTCCATCGATCTCTTCGTCATGGCACCCAAGAGCAACGCGACCCGGATGGCTGCGG
CTTTCGTGGTTCTTATGATCATCTCTTCCACCCTATCATCATCGTCCTGCTACGCGCGCACAAGTAATAACATCTCTTGT
TGTTTTGTT----CACGTGTTTCCAAATTTTGTTGTTCTCTAGAGTTTGGATC-G---GGTATTTGGGTCCGTAAATTTG
CTAACAAA-------------TACTTTTTCCTACATACATTGTACGTCG-------------------ATTCATTGCTAA
ATTTATGTCGGGACTTATATGGATCATCGATCGAACTTGCAGTTGAAGAGGGAGCGGATTC------TCCTGTGTGCTTC
CATGTGGAAAAGTGCCAAGACCGTTGCCAGACCGCATGCAGCATCAGCGGCAAGCCCTCGACTGGAGCCTACTGCAAGAC
CGATCAGTGTTGTTGCGCCTAGCATGATGCCTCTATTCTCGCTTGAGCAATAATTTTATTATTATTACAGCTTCTTAGAA
ATGTAGTATTGGTTACCG-AAAAATTATAGAGAAAAGTCCCCTCAACTTGCCACTGGGTTTTGATTTCAACCCTGAGCTC
T-AAACCGGTAATCCAGCACCCTTAACTTCCCACTAGGTTCGCAAATCAACCCCCAACTCAGTTTTAACTGTGTTGACC-
GGTTTTGGGTACGTTTACTGCTGACTACG---------------------------------------------------
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----------------------------------------------------------ACAACGC---------------
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>chr1D_669
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-----------------------------------------------------------------------------TAA
TAATTCCAAAGATGCATCAAACCGTTGAGGAT------------------------------------------------
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-------------------------------------------------------------------TTCCTTGCATTCG
CCTCCTAAATA---AAATAAAGAGTCTACGGCACATCTAGATGTGCTCTATTTAT-------------------------
--------------------------------------------------------------------------------
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--------------------------------------TGCACATCTAAATGAGTGAATCAAGCATCAAAAGAA--CAAA
AAAAAGAAAAAGAAAATATCCACATGAATCTCAACGTAAGATCAATGACATAGGATTTAGATTTGCAATACATATGGCAC
ATCTAGATGTGCTTTAGCAAAACTGAATAAAATACTAGGCAGGGGGCCATTGTAAAATA---------------------
-------------------------------------------------------AAGAGGATACTTGCATATTTGGAAA
CCAATCAATTCTTGCTAGAAAATCAATATTTCAATTGATATA--ATAGTATTTAATTCCAGCTTAAAAAATCAGGAAGGC
ATTTTAATGCCAAAGATTTGATTCACCCTCTCTCTATATAAACGACTATACAAGGAC-----ATTACTCGTATCATTAGG
CACACAGCAAAGAAATAAGCTATTCTCCG----TCTCTTCGTCATGGCACCCAAGAGCAACGCGACCCGGATGGCTGCGG
TTTTCGTGGTTCTTATGATCATGTCTTACACCCTATCATCATCGTCCTGCTATGCACGTACAAGTAATAACACTTCTTGT
TGTTTAGTT----CGTGTGTTTCTAAATTTTGTTGTTCTCTAGAGTTTGGATCTG---G-TATTTGCGTCTGTAAATTTC
TTAAC---AAAAATCCATCAATACTTTTCCCTACATACATTGTATGTCG-------------------ATTCATTGCTTA
ATTTATGTCGGGACTTATATGGATCATCGATCGAACTTGCAGTTGAAGAT------------------------------
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>chr1A_670
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------------------------------------------------------------------------------AA
TAATTCCAAAGATGCATCAAAACGTTGAGGAT------------------------------------------------
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-------------------------------------------------------------------TTCCTTGCATTCG
CCTCGTAAATA---AAATAGTAGGTCCCCTTGAACCAATCTGTGGTTGGATGATTAGAACTGTGGTATCCCAGCCCACCA
GGGTTTAAATCCTGGTGCTCGCATTTTTCCTGGATTTATTTCAGGATTTCCGGTGATGCGCATTCAGTGAGAGGAGACGT
TCCCGTGGATGACGGGGCGCCTACTGTGACTTCGTAAATCTCAAGATAATATGTCGGCTCAGTCTTTCAGAGGTGCTCAT
AAGAGTAGGGTATGTGTGCGTTCATACGGATGAGTGTATGCACGTGTATATGAGCGCTTATGTTTATACCGATGGTCAAA
AAAAATACTAGGCCCCCCA-------------------------------------------------------------
----------------------------AAAAAACCAGGCAAGAGGCCGTCGTAAAAAA---------------------
-------------------------------------------------------AGGATACTA----CATATTTGGAAA
CCAATCAATTCCTGCTAGAAAATCAATATTTCTATTGATATT--GTAGTATTTAATTCCAGCTTAAAAAATCAGGAAGGC
ATTTAAATGCCAAAGATTTGATTCACCCTCTCTCTATATAAGCGGCTATACAAGGACC-GAGATT-GCCGTATCCTTAGG
CACAAAGCAAAGAAATAAGCTATTTTCCATCGATCTCTTCGTCATGGCACCCAAGAGCAACGCGACACGGATGGGTGTGG
TTTTCGTGGTTCTTATGATCATGTCTTCCACCCTATCATCATCGTCCTGCTACGCACGCACAAGTAATCACATCTCTTGT
TGTTTTGTT----CATGTGTTTCCAAATTTTGTTGTTCTCTAGAGTTTGGATC-G---G-TATTTGCTTTCATAAATTTG
TTAAC---AAAAATCCATCACTACTTTTCCCTACATACATTGTATGTCG-------------------ATTCATTGCTTG
ATTTATGTTGGGACTTATATGGATCATCGATCGAACTTGCAGTTGAAGATGGAG------C------TCCAGTGTGCTCC
CATATGGAAAAGTGCCAAGACCGTTGCCAGACCGCATGCAGCATCGGCGGCAAGCCCTCGACTGGAGCCTACTGCAATGT
CGATTAGTGCTGTTGCGCCTAGCATGATGCTTCTATTCTTGCTCGGGCAATAATTTTAT------TACAGCATCTTTCAA
ATGTAGTATTGGTTATCA-AAAAATTATA---------------------------------------------------
--------------------------------------------------------------------------------
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>chr1B_749
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---------------------------------ACTAGGCATGAGGCCGTTGTAAAATAAT-------------------
-----------------------------------------------------AGAGGATGCTA----CATATTTGGAAA
CCAATCAATTCCTGCTAGAAAATCAATATTTCAATTGATATA--GTAGTATTTATTTCCAGCTTAAAAAATCAGGAAGGC
ATTTTAATGCCAAAGATTTGATTCACCCCCTCTCTATATAAACGACTATACAAGGCCCAGAGATTAACCGTATCCTTAGG
CACACAGCAAAGAAATAAGCTATTCTCCG----TCTCTTTGCCATGGCACCCAAGAGCAATGCGACCCGGATGGTTGCGG
TTTTCGTGGTTCTTATGATCATGTCTTCCACCCTATCATCATCGTCCTGCTATGCACGTACAAGTAATAACATTTCTTGT
TGTTTAGTT----CATGTGTTTCTAAATTTTGTTGTTCTCTAGAGTTTGGATCTG---G-TATTTGCGTCCGTAAATTTA
TTAAC---AAAGATCCATCAATACTTTTCCCTACATACATTGTATGTCG-------------------ATTCATTGCTTA
ATTTATGTCGGGACTTATATGGATCATCGATCGAACTTGCAGTTGAAGATGGAG------C------TCCAGTGTGCTCC
CGTGTGGAAAAGTGCCAAGACCGTTGCCAGACCGCATGCAGTATCAGTGGCAAGCCCTCGACTGGAGCCTACTGCAATAA
CGATCAGTGCTGTTGCGCCTAGCATGATGCTTCTGTTCTTGCTCGAGCAATAATTTTAT------CACAGCTTCTTTCAA
ATGTAGTATTGGTTATCA-AAAAATTATA---------------------------------------------------
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>chr3A_881
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--TTTAATGCCAAATATTTGATTCTCTCTCTAT--ATATAACCGACTACAGCAGGTCCAAAGCTT-ACGGTATCCTTGAG
CACACAGCAAAGAAATAAGTGATTCTTCATCCATCTCTTCGTCATGGCATCCAAGAGCACAACGACCCGGATGGCGGCGG
TTTTCGTGGTTCTTATGATCATGTCTTTCACCCTATCATCATCGCCCTGCTACGCTCGCACAAGTAATGACATTTCTTGT
TGTTTTATATATACACGTGATGCCAAATTTTGAAGTCCTCTAGAGTCTTGATTGATATA-TATTTGCATCTGTAAATTTG
TTAAC---GAAAATCCATCACTATTTCTCACTACACACATAATTCAATTAATATTTTAGTGTGCTGATATTAATTGCTTA
ATTCATGTTGGGACTTATATGGATCATTGATCGAAATTGCAGTTGAAGATGGAG------CGAATCCTCCAACATGCTTC
CATCAGGAAAAATGCCAAGATCGTTGCCAGACTGCATGCAGCATCAGCGGCCAACCCTCGATTGGAGCCTACTGCAAGCT
CGATCAATGTTGTTGTGCCTAGGACGATGCTTCTTTTTTTGCTTGAACAATAATTTTAT------TATAAATTCTTGCAA
ATGTAATATTGGTTACCA-ATAAAATATA---------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr3D_922
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-------------------------------------------GACTATAGATGGCCCAAAGCTT-ACGGTATCCTTGAG
CACACAGCAAAGAAACAAGTGACTCTTCATCCATCTCTTCGTCATGGCATCCAAGAACACAACGACCCGGATGGCTGCGG
TTTCCGTGGTTCTTGTGATCATGTCTTTCACCCTATCATCATCGCCCTGCTACGCTCCTACAAGTAATGACATTTCTTGT
TGTTTTATT----CACGTGATGCCAAATTTTGAAGTCCTCTAGAGTCCGGATTGG---A-TATTTGCATCTGTAAATTTG
TTAAC---GAAAATCTGCCTCTATTTCTCACTACACACATAATTCAATT-------------GCTGCTATTAATTGCTTA
ATTCATGTTGGGACT--TATGGATCATCGATCGAAATTGCAGTTGAAGATGGAG------CGAATCCTCCAACGTGCTTC
CATGTGGAAAAATGCCAAGACCGTTGCCAGACTGCATGCAGCATCAGCGGCCAACCCTCCATTGGAGCCTACTGCAAGCT
TGATCAATGTTGTTGTGCCTAACATGATGCTTCTTTTTTTGCTCGAACAATAATTTTAT------TATAAATTCTTGCAA
ATGTAATATTGGTTACC---------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>chr4A_1845
AAGTT---------------------------------------------------------------------------
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------------------------------------------------------TTTTTTAGAACGAAGACGCACGATGC
GTCCGACCTTAAATTAATAAAGCCCACCAACAAGCAGCATCCAACAAGTTCAACACAGAGACTACAACAGAAGGTAAGTG
GCCGAAGCC-AAAAGTACGAAACATGCAACCGGCCTCAGCCTGATAAAGAAAGACAGCAACACTAGCACACAAGCAGCCA
GTCCAAAATAGCACCACGAGCAGCATCTTAGTGACGGACTTCAAACTGAATCGTGCGGATCCGCTCCATGGCCTCCATCA
TCCGATCTGCATCACGCCGTTTCCCCAACTGTGTCCATGTCTGGAGAAACAAGTGGCATTTGAAAATAATATCAGCAGGA
TGGTTAAGGAACTTGTGTTCGATAGTCATCTTATTACGGGTGGTCCATAATGACCAGCACAGCGCCCCTACGCATCGCCA
CAGCACGCGCCCGAAGCTACCCGGATGAGCGAGAAGGATCCCACGTAGGTCCGACGTCGTATGGGGATTCC-AGTTCTGC
GCAAACGCCTCACAGACGGCACTCCAAGCAAAACGAGCTAGGTGGCATTTGAAGAAGATGTGGTTAGCATTTTCA
>chr5B_1848
--------------------------------------------------------------------------------
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---------------------------------------------------TTATTTTTTAAAACGAAGACGCACGATGG
GTCCGGCTTTAAATTAATAAAGCCCACCGACAGGCAGCATCCAACAAGTTCACCACAGGAAATACAACAAAAGGAAAGTG
GCCGAAGCC-AATAGTACTAAACATGCAACCGGCCTCAGCCTGAAAGAGAAAGACAGTAATACTAGCACACAAGCAGCCA
GTCCAAAATAACACCATGAGCAACATCTTAGTGTTGGGCTTCAAACTGAATCGTGCGGATCCGCTCCATGGCCTCCATCA
TCCGATCTGCATCACGCCGTTTCCCCAACGGAGTCCATGTCTGGAGGAACACGTGGCATTTGAAAATAATGTCAGCAGGA
TGGTTAGGGAACTTGTGTTCGATAGTCATCTTATTACGGGTGGTCCAAAGTGACCAACACAGCGCCCCTACGCAGCGCCA
CAGCACGCGCCCGAAGCTACCCCTATGAGCAAGAAGGATCCCACGTAGGTCCGAAGCCGTATGGGGATT-CTAGTTCTGC
GCAAACGCCTCATGGACGGCACTCCAAGCAAAAC-AGCTAGGTGGCAATTGAAAAAGATGTGGTTAGCATCTTCA
>chr1B_1848
TTTTCT--------------------------------------------------------------------------
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--------------------------------------------------------TTTTAGAACGAAGACACATGATGC
GTCCGGTTTTAAATTAATAAAGCCCACCGACAGGCGGCATTCAACAAGTTCACCATAGAAAATACAGCAAAAGGTAAGTG
GCCGAAGCC-AAAAGTACGTAACATGCAACCGGCCTCAGCCTGATAGAGAAAGACAACAACACTAGCACACAAGCAGCCA
GTCCAAAATAACACCATGAGCAACATCTTAGTGACGGGCTTCAAACTGAATCGTGCGGATCCGCTCCATGGCCACCATCA
TCCGATCTGCATCACGCCGTTTCTCCAACGGAATCCATGTCTGGAGAAACAAGTGGCATTTGAAAATAATATCAGCAGGA
TGGTTGTGGAACTTGTATTTGATAATCATCTTATTACGGGTGGTCCATAGTGACCAGCACAGCACCCCTACGCAACGCCA
CAGTACGCGCCCAAAGCTACCCCTATGAGCGAGAAGGATCCCACGTAGGTCCGAAGCCGTATGGGGATT-CCAGTTCTGC
GCAAACGCCTCACGGACGGCACTCCAAGCAAAACGAGCTAGGTGGCAATTGAAAAAGATGTGGTTAGCATCTTCA
>chr4B_1848
TTTTTT--------------------------------------------------------------------------
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--------------------------------------------------------TATTAGAACGAAGACGCACGAAGC
GTCCGGCTTTAAATTAATAAATCCCACCGACAGGCAGCATCCAACAAGTTCATCACAGAAACTACAATAGAAGGAAAGTG
GCCGAAGCC-AAAAGTACGGAACATGCAACCGGCCTCAGCCTGATAGAGAAAGACAGCAACACTAGCACACAAGCAGCCA
GTCCAAAATAGCACCACGGGCAGCATCTTAGTGACGGGCTTCAAACTGAATCGTGCGGATCCGCTCCATGGCCTCCATCA
TCCGATCTGCATCACGCCATTTCCCCAACGGAGTCCATGTATGGAGAAACAAGTGGCATTTGAAAATAATATCAGCAGGA
TGGTTAGGGAACTTGTGTTCGATAGTCATCTTATTGCGGGTGGTCCATAATGACCAGCACAGCGTCCCTACGCATCGCCA
CAGCATGCGCCCGAAGCTACCCCTATGAGCGAGAAGGATCCCACGTAGGTCCGAAGCCGTATGGGGATT-CCAGTTCTGC
GCAAACGCCTCACGGACGGCACTCCAAGCAAAACGAGTTAGGTGGCATTTGAAGAAGATGTGGTTAGCATCTTCA
>chr1B_1849
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----------------------------------------------------TTTTTTTTAGAACGAAGACGCACGATGC
GCCCGGCTTTAAATTAATAAAGCCCACCGACAGGCAGCATCCAACAAGTTCACCACAGAAACTACAGCAGAAGATAAGTG
GCCGAAGCT-AAAAGTACGGAACATGCAACCGGCCTCAGCCTGATAGAAAAAGACAGCAACACTAGCACACAAGCAGCCA
GTCCAAAATAACACCACGAGCAGCATCTTAGTGATGGGCTTCAAACTGAATCGTGCGGATCCGTTCCATGGCCTCCATCA
TCCGATCTGTATCACGCCGTTTCCCCAACGGTGTCCATGTCTGGAGAAACAAGTGGCATTTGAAAATAATATCAGCAGGA
TGGTTAGGGAACTTGTGTTCGATAGTTATCTTATTACGGGTGGTCCATAGTGACCAGCACAGCGCCCCTACGCAACGCCA
CAGCACGCGCCCGAAGCTACCCCTATGAGCGAGAAGGATCCCACGTAGGTCCGAAGCCGTATGGGGATT-CCAGTTCTGC
GCAAACGCCTCACGGATGGCACTCCAAGCAAAACGAGCTAGGTGGCAATTGTAAAAGATGTGGTTAGCATCTTCA
>chrUn_1850
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-----------------------------------------------------TTTTTTTAGAACGAAGACGCACGATGC
GTCCGGCCTTAAATTAATAAAGCCCACCGACAGGCAGCATCCAACAAGTTCAACACAGAAACTACAACAGAAGGTAAGTG
GACGAAGCC-AAAAGTACGGAACATGCAACCGGCCTCAGCCTAATAAAGAGAAACAGCAACACTAGCACACAAGCAGCCA
GT-------AGCACCACGAGCAACATCTTAGTGACGGGCTTCAAACTGTATCGTGCGGATCCGCTCCATGGCCTCCATCA
TCCGATCTTCATCACGCCGTTTCCCCAACGGTGTCCATGTCTGGAGAAACAAGTGGCATTTGAAAATAATATCAGCAGGA
TGGTTAGGGAACTTGTGTTCGATAGTCATCTTATTACGGGTGGTCCATAGTGACCAGCACAACGCCCCTACGCATCTCCA
CAGCACGCGGCCGAAGCTACCCCTATGAGCGAGAAGGATCCCACGTAGGTCCGACGCCGTATGGGGATT-CTAGTTCTGC
GCAAACGCCTCACGGACGACACTCCAAGCAAAACGAGCTAGGTGGCATTTGAAGAAGATGTGGTTAGCATCTTCA
>chr7A_1850
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-----------------------------------------------------TTTTTTTAGAACGAAGACGCACGATGC
GTCCGGCCTTAAATTAATAAAGCCCACCGACAGGCAGCATCCAACAAGTTCAACACAGAAACTACAACAGAAGGTAAGTG
GACGAAGCC-AAAAGTACGGAACATGCAACCGGCCTCAGCCTAATAAAGAGAAACAGCAACACTAGCACACAAGCAGCCA
GT-------AGCACCACGAGCAACATCTTAGTGACGGGCTTCAAACTGTATCGTGCGGATCCGCTCCATGGCCTCCATCA
TCCGATCTTCATCACGCCGTTTCCCCAACGGTGTCCATGTCTGGAGAAACAAGTGGCATTTGAAAATAATATCAGCAGGA
TGGTTAGGGAACTTGTGTTCGATAGTCATCTTATTACGGGTGGTCCATAGTGACCAGCACAACGCCCCTACGCATCTCCA
CAGCACGCGGCCGAAGCTACCCCTATGAGCGAGAAGGATCCCACGTAGGTCCGACGCCGTATGGGGATT-CTAGTTCTGC
GCAAACGCCTCACGGACGACACTCCAAGCAAAACGAGCTAGGTGGCATTTGAAGAAGATGTGGTTAGCATCTTCA
>chr7A_1850
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-----------------------------------------------------TTTTTTTAGAACGAAGACGCACGATGC
GTCCGGCCTTAAATTAATAAAGCCCACCGACAGGCAGCATCCAACAAGTTCAACACAGAAACTACAACAGAAGGTAAGTG
GCTGAAACC-AAAAGTACGGAACATGCAACCGGCCTCAGCCTGATAAAGAGAAACAGCAACACTAGCACACAAGCAGCCA
GT-------AGCACCACGAGCAACATCTTAGTGACGGGCTTCAAACTGTATCGTGCGGATCCGCTCCATGGCCTCCATCA
TCCGATCTGCATCACGCCGTTTCCCCAACGGTGTCCATGTCTGGAGAAACAAGTGGCATTTGAAAATAATATCAGCAGGA
TGGTTAGGGAACTTGTGTTCGATAGTCATCTTATTACGGGTGGTCCATTGTGACCAGCACAACGCCCCTACGCATCTCCA
CAGCACGCGCCCGAAGCTACCCCTATGAGCGAGAAGGATCCCACGTAGGTCCGACGCCGTATGGGGATT-CTAGTTCTGC
GCAAACGCCTCACGGACGACACTCCAAGCAAAACGAGCTAGGTGGCATTTG-AGAAGATGTGGTTAGCATCTTCA
>chr3A_1851
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------------------------------------------------------TTTTTTAGAACGAAGACGCATAATGC
GTCCGGTTTTAAATTAATAAAACCCACCAACAAATAGCATCCAACAAGTTCAATATAGAGACTACAACAGAAGA-AAGTG
GCCAAAGCCAAAAAGTACGGAACATGCAACCGGCCTCAGCCTAATAGAGAAAGACAGCAACACTAGCACACAAGCAGCCA
GTCCAAAATAGCACCACGAGCAGCATCTTAGTGACGGGCTTCAAACTGAATCGTGCGGATCCGCTTCATGGCCTCCATCA
TCCGATCTGCATCACGCCGTTTCCTCAACGGTGTCTATGTATGGAGAAACAAGTGGCATTTGAAAATAATATCAGCAGAA
TGGTTAGGGAACTTGTGTTCGATAGTCATCTTATTACGGGTGGTCCATAATGACCAGCACAGCGCCCCTACGCATCGCCA
CAGCACGCGCCCGAAGCTACCCCTATGAGCGAGAAGGATCCCACGTAGGTCCGACGCTGTATGGGGATT-CCAGTTCTGC
GCAAACGCCTCACGGCCGGCACTCCAAGCAAAACGAGCTAGGTGGCATTTGAAGAAGATGTGGTTAGCATCTTCA
>SNPs
-------SS--S-------------S----------------------------------------S-------------
--------S-----------------------S-------------------------------------------S-SS
SSSS-SS-SS-------------S--SSSSSSS-SSSS------------------------------------------
-----------S--------------S----S------S----S-----------------------SSSSS-S------
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----------------------------------------------------------------------S---------
------S-------------S----S------------------------------------------------------
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------S----------S-S--S-S---------------------S---------------------------------
--------------------------------------------------------------S--S-SSS----------
--------SSSSSSSSSSSSS-----------------------S--------------S----S---------------
---------------------------------------------------------------------S-----S----
---------------------------S----------------------------------------------------
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-----------------------S--------------------------------------------------------
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-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
------S----------------------------------------S----------S-------------S-------
---------S------------------------S-------S---S---------------------------------
--------------------------------------S-----------------------------------------
--------------------------------S-------------------------------------------S---
-----------------------------------S-------------S------------------------------
--------------------------------------------------------------------------------
-------S--S---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S------S------------------------------
------S-----------S----------------------------------------------------S--------
---------------------------------S----S----------------------------------------S
--------------------------SS--------------------------S-S-----------S----------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S-------
---S----------------------------------------------------------------------------
------------------------------------SS------------------------------------------
----------S----------------------S----------------------------------------------
------S----------S---S------S---------------------------------------------------
---------------------------------------S-----------------------------------S----
---------------------------------------------------S----------------------------
-----------------------------------------------S---------------------------
>forward_1543
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---CTAGCCTCCGGTGTAATCGC---------------------------------------------------------
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>reverse_3857
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----------------TGGTCCACGGGTCAGCTATA--------------------------------------------
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---------------------------------------------------------------------------
