>input_sequence_80665
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----------------------------------------ATGCTCTCCTCTGCCCCGGATCTGGAC-GGGGGGCCTGGC
CCAAGGCGCGCGGCGGGCTGGTCACGGCTCCTTCGGTCTCTCGTGCGGCATGAGGTGTCGGCCGATGCTGGTTCTGCTGC
CCGATGGCTGATGTCTCGGGGCTTCATGCGCAGTTCCGCCCAGATCTCGCTGTCTCTGGCGGCTCTGCTCGTTTGTGAAG
GTCAGGACGAGGTGGCGGTGGCTGTTCAGGAACGA------------------AGTGCTTGGCCGAGGTGGGTTGCAGTG
GGTGGTGGTGGTGC---------------------TGGAGATGTACTGGCGGTGGGCTGTGGTGAGGATTGCCGCTCGGT
TGCTGTTGGCTCTGGTGCTCTCTTCCGGTCGTGTCGAGGCATCCTGGCCCAGGACCACCCATATCTTGCGTCCTTGCTGG
CTCGGGTCGACCATGACGAGCAGTGA------------------------------------------------------
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>chr4A_1_TraesCS4A01G345800
AGAGCGGTGCGGACTGCGAATGCCGCGGTGGCTTGGCCATACCCCAGGCGGCAGCTAGTAGCGGCTGCGCCCAGCCAGGC
GACGGCAAGTGCAGACCTAGGCGACGAGCGCTGCTGGCACTAACACAGGCACATGCACACCCCGCAAACTCTCATCTCCC
AGGCAGTCTAATTTCCCTATAAAAAGTAGGCTATAGCACTCTGAGATTCGGTGAATTGATAATACACATGCTAATTTAGG
TAGTAGATAATTGCCATGGGCACTGGGTAGCAACGCTAATCAACGCAAAATCGATTTGGTTTTTAAGTGAAAAAAGAGAT
GTACGTTACGGATGGAGTTGAGGAAGACTTTTCAGCAGCAGCTCATCATCCTTTCCTTGGGTTGATTTTTTCATATTTTT
TAGATTGGCCTGCTCAGGCTTTTCTTTGTAGCTCCGCCACTGCAAGGAAAGAAAGAAATAGATAAACTGACCAGAAGCCA
TTGTCGCAGATGGACACACAAGCAGTTCTGACAGAGAAATCCAGAATAAACAAGCATGAGAACCCCTGAAAATCATCAAT
AAATAAGATGGAGTATGGTGTCTCGATAGTATTCTGGGAAGAAAAAATAAGTTTCTCTCCATGAGTGTTTCTTTGTGCAT
ACAAGAACACATTTTGCACACCAGCCGGCCCCCGCGTCGTCCTCCCCCAGGGCGACTCGGGCGGCGCCGCTCCTCCCGCC
GCAGCAGGCCCCCTCTCTCCAGCTTCCCCTCCCCTCGCCGCCGCCAGACGGACTCCTCCGGGCGAAGCCCCTACGGATCC
GGCGGCGGCGGGGACCTGGCGACCCGGGCTGCTTTACACGGGCGGGGGCTCGTGTTCTGGCGGCCGGCACGGCGCTTCTC
CGCGCTTGCTGCGGGTGCTCGGCGGCGGCTTGGCGGGGGTGTTGGCTGCGGAGGTGGGCGGCCTGGAGGTGCGGGGCGTG
CACGGAGTGCGGGGCGGCTCAGATCGGTCGCGGCGCCGGCATGCTCTCCTCTGCCCCGGATCTGGAC-GGGGGGCCTGGC
CCAAGGCGCGCGGCGGGCTGGTCACGGCTCCTTCGGTCTCTCGTGCGGCATGAGGTGTCGGCCGATGCTGGTTCTGCTGC
CCGATGGCTGATGTCTCGGGGCTTCATGCGCAGTTCCGCCCAGATCTCGCTGTCTCTGGCGGCTCTGCTCGTTTGTGAAG
GTCAGGACGAGGTGGCGGTGGCTGTTCAGGAACGA------------------AGTGCTTGGCCGAGGTGGGTTGCAGTG
GGTGGTGGTGGTGC---------------------TGGAGATGTACTGGCGGTGGGCTGTGGTGAGGATTGCCGCTCGGT
TGCTGTTGGCTCTGGTGCTCTCTTCCGGTCGTGTCGAGGCATCCTGGCCCAGGACCACCCATATCTTGCGTCCTTGCTGG
CTCGGGTCGACCATGACGAGCAGTGAGGCGATGTGGTGGTTGCTTCCCGGCGGCGTGGTGGCGGCTCGCTGCCGGGAGCA
CGGCTGGGCATGGCAGGAGGGTGGAGGTTGGCGGATGGTGGATGTGGTGGACTGGCTGGTTTGGTCAGTGGTGTGGGAGA
CGATGCCGGG-CGAAAGTCTGTCTCTGGCTACGGTCGGAGCCAGCAGCAACGGCGTCCGTGGGCGTCGCTGCCTTCTTGA
AGGCGCTGCTGTGGTGATGCTCTCCTCTCCCTTACCGTCCCTAGCTCCATGGGAAACCTTAGATCCGTGCTCTTGCGGAT
CGGATGATGGCGGCGGCTTGCGTCGTGTCCCTCTTGGGGGCATCATTTTGGAGCAGGGATCAGCCGGAGTGACTCGTGTG
TGGTTGATGGTAGTGTTCTGTACGGGTCCGGCGGCGGTGCCTTTGTGTCGTCCCTGTTGCTATGCAAGCTCAAGATCCTC
CCATGGCTGCCGTTTTGTTGCGGTGAGCTTCGTGCTCTTGGTGTTGTCTCGGTTCTTCTTTGCTCAATGACG-CGCAAGA
AGCCTCCCCAACCTGCTAATCGTCCCGGA-TTCAC-TGGCGGAGCTCCCAGTCAAGGTTCGTGTTTGGCACTCGTTGATT
GTGGTG-CTCCTGTGTTGCACCGTGGGTTTGGTATGCACGCCGGTGCGGTGCGTTAGGTTGCTCGCAA-GTCTTGGTATT
GGGATCCCTCAATGAAACTCCACAACTACTTGTGTCTTTCGTGATGATGGTCCTCTTAGTCTGATAGGTATGTCCTGCCT
TATGTTGAGTGTCTTGTTCTTCTCCT--TTCTTGTAACCTTGTTACTTGTATGGTTTTCGGCCCGGTTTTCCTAT--AAA
CGGGTCAGCTTGTTTAGGTTTTCGATCCGGTTTCCCTTATAAACTGGATCACTCTCCTATCATAATGGCCACTTTGAGTA
ATATATTCAGGTGGAGGGACTCCACCCCCTGTGAT-TCTCAAAAAAAAAAGTATTATGTACCAAGTGAAAAGCAAGC
>chr3A_20
-------------------ATGCCGCGGTGGCTTGGCCATACCCCAGGCGGCAGCTAGCAGCGGTTGCGCCCAGCCGGGC
GACAGCAAGTGCAGACCTAGGCGACGAGCGTTGCTG-CACTAACACAGGCACATGCACACCCCGCAAACTCTCATCTCCC
AGGCAGTCTAATTTCCCTATAAAAAGTAGGCTATAGCACTCTGAGATTCAGTGAATTAATAATACACATGCTAATTTGGG
TAGTAGATAATTGCCATGGGCACTGGGTAGCAACGCTAATCAACGCAAAATCGATTTGGTTTTCAAGTGAAAAAAGAGAT
GTACGTTACGGATGGAGTTGAGGAAGACTTTTCAGCGGCAGC-CATCATCCTTTCCTTGGGTTGATTTTTTCATGGTTTT
TAGATTGGCCTGCCTAGGCTTTTCTTTGTAGCTCCGCCACTGCAAGGAAAGCAAGAAATAGATAAACTGACCAGAAGCCA
TTGTCGCAGATGGACACACAAGCAGTTCTGACAGAGAAATCCAGAATAAACAAGCATGAGAACCCCTAAAAATCATTAAT
AAATAAGATGGAGTATGGTGTCTAGACAGTATTCTGGGAAGAA-------------------------------------
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>chr7B_667
G-------------------------------------------------------------------------------
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---------------------------GCCCCTGCGTCGTCCTCCCCCAGGGCGACTCGGGCGGCGCCGCTCCTCCCGCC
ACAGCAGGCCCCCTCTTTCCAGCTTCCCCTCCCCTTGCCACCGGCAGACGGACTCCTCCGGGCAAAGCCCCTACGGATCC
AGCGGCGGCGGGGATCTGGCGACCCGGGCTGCA-------------------TGTTCTGGCGGCCGCCACGGCGCTTCTC
CGCGCATGCTGTGGGTGCTCGGCGGCGGCTTGGCGAGGGTGTTGGCTGCGGAGGTGGGCGGCCTGGAGGTGCAGTGCGTG
CACGGAGTGCGGGGCGGCTCGGGTCGGTCACGACGACTGCATGCTCTCCTCTGCATCGGATCTGGAT--GGGGGCCTGGC
CCAAGGTGCGCGGTGGGCTGGTCACGGCTCCTTCAGTTTCTCGTGCGGCATGGGGTGTCAGCCGATGAAGGTTCTGCTGC
CCGATGG------TCTCGGGGCTACAGGCCTAGTTCCACCCAGATCTTGCTGTCTCTGGCGGCTCTGCTTGTCTGTGAAT
GTCAAGACGAGGTGGTGGTGGCTGTTTAGGAACGGGGTGGCGGTTCTCTCCTGAGTGCTTGGCCGAGGTGGGTTGCGGTG
AGTGGTGGTGGTG------------------------GAGATGTACTGGCGGTGGGCGGTGGTGAGGATTGCCGCTCGAC
TGCTATTGGCTCTAGCGGTCTCTTCTAGTTGTGTCGAGGCA-CCTGGCCCAGGACCGCCTAGATCTTGCGTCCATGCTGG
CTCGGGTCGGCCATGGCGAGCA-TGAGGCGATGTGGTGGTTGCTGCCCGGCGGCGTGGTGGCGGCTCACTGTCGGGAGTA
CGAC---GCATGGCAGGAGGGTGGAGGTTGGCGGATGGTGGATGTGGTGGACTGGCTGGTTTGGTCAGTGGTGTGGGAGA
CGATGCC-GG-CGAAAGTCTGTCTCTGGCTATGGTCGGAGCCAGCAGCGACGGCGTCTGTGGGCGTCGCTGCCTTCTTGA
AGGTGCTGTTGTGGTGATGCGCTCCTCTCCCTTACCGTCCCTAGCTCCAT-GGAAACCTTAGATCCATGCTCTGGCGGAT
CGGATGATGGCGACAGCTTGCGTCGTGTCCCTCTTGGGGGCATCATTTTGGAGCAGGGATCAGCAGGAGTGACTAGTGTG
TGATTGATGGTGGTGTTCTGTAGGGGTTCGGCGGCGGTGCCTTTGTGTCATCCCTGTTGCTATGAAAGATCAAGATCCTC
CCATGGCTGCTGTTTTGTTGCGGTGAGCTTTGTGCTCTTGGTGTTGTCTCGGTTCTTCTTTGCTCAATGATG-CGCAAGA
AGCCTCCCCATCCCGCTAATCGTCCCAAA-TTCAC-TAGCGGAGCTC-CAGTCAAGGTTCGTGTTTGGCACTCATTAATT
GTGGTG-CTTCTGTGTTGCGCTGTGGGTTTGGTATGCATGCCGATGCAGTGCGTTAAGTTGCTCGCAA-GTCTTGGTATT
GTGATCCCTCGATGATACCCCACAACTACTTGTGTCTTTCGTGGTGATGGTCCTCTTAGTCTGCTAGGTATGTCCCGCCT
TATGTTGAGTGTCTTGTTCTTCTCCT--TTCTTGTAACCATGTTACTTGTATGGTTTTCGGCCTGGTTTTCCTAT--AAA
CGGGTCAATTTGTTCAGGTTTTCGATCTGGTTTCCTTTATAAACTGGACCACTCTCCTGGCATAACGACCACTTTGAGTA
ATATATTCAGGTGGAGGGACTCCTCCCTCGGTGAT-TCTCAAAAAAA------------------------------
>chr2D_667
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--------------------------GGCCCCCGTGTCGTCCTCCCCCAGGGCGACCCCGGCGGCGCCGCTCCCCCTGCT
GCAGCAGGCCCCCTCTCTCCAGCTTCCCCTCCCCTCGTCGCCGCCAGACGGACTCCTCCGGGCGAAACCCCTACGGATCC
GGCGGCGGCGGGGATCTGGCGTTCCGGGCTGCTTCACACGGGCGGGGGCTCGTGTTCTGGCGGCCGGCACTACGCTTCTC
CGGGCATGCTGCGGGTGCTCGGCGGCGGCCTGGCGGGGGTGTTGGCTGCGGAGGTGGGCGGCCTGGAGGTGCAGTGCGTG
CACGGAGTGCGGGGCGGCTCGAATCGGTCGCGGCGCCGGCATGCTCTCCTTTGGCACGGATCTGGAC-GGGGG-CCGGAC
CCAAGGCGTGCGGCGGGCTGGTCGCGGTTCCCTTGGTCTCTCGTGCGGCATGGGGTGTCGGGCGATGCAGGTTCTGCTGC
CCGATGGCTGATGTCTCGGGGCTACAGGCCCAGTTCCGCCCAGATCTCGTTGTCTCTGGCGGTTCTGCTCGTTTGTGAAG
GTCAGGACGAGGTGGCGGTGGCTGTTCAGGAACGGGGTGGCGGCTCGCTCCTGAGTGCTTGGCCGAGGTGGGTTGCGGTG
GGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGAGATGTACTGGCGGTGGGCGGTGGTGAGGATTGCCGCTCGGC
TGCTGTTGGCTCTGGTGCTCTCTTCCGGTCGTGTCGAGGCATCCTGGCCCAGGACCGCCCAAATCTTGCGTCCTTGCTGG
CTCGGGTCGGCCATGACGAGCAGTGAGGCGATGTGGTGGTTGCTGCCCGGCGGCGTGGTGGCGGCTCGCTGCCGGGAGCA
CAGCTGGGCATGGTAGGAGGGTGGAGCTTGGCGGATGGTGGATGTGGTGGCTTGGCTGGTTTGGTCAGTGGTGTGGGAGA
CGATGCC-GGGCGAAGGTCTGTCTCTGGCTACGGTCGGAGCCAGCAGCGACCGCGTCCGTGGATGTCGCTGCCTTCTTGA
AGGCGCTGTTGTGGTGATGCGCTCCTCTCCCTTACCGTCCCTAGCTCAATGGGAAACCTTAGATCCGTGCTCTCGCGGAT
CGGATGACGGTGGCGGCTTGTGTCGTGTCCCTCTTGGGGGCATCATTTTGGAGCAGGGATCAGCCGGAGTGACTAGTGTG
TGGTTGTTGGTGGTGTTCTGTAGGGGTTCGGCGGCGGTGCCTTTGTGTCGTCCCTGTTG---------------------
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>chr3D_668
--------------------------------------------------------------------------------
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---------------------------GCCCCCGTGTCGTCCTCCCCCAGGGCGACCCGGGCGGCGTCCCTCCCCCCGTT
GCAGCAGGCCCCCTCTCTCCAGCTTCCCCTCCCCTCGCCGCCGCCAGACGGACTCCTCCGGGTGAAGCCCCTACGGATCC
GGCGGCGGCGGGGATCTGACGTCCCGGGCTGCTTGACACGGGCGAGGGCTCGTGTTCTGGCGGCCGGCACGGCGCTTCTC
CGGGCATGCTGCGGGTGCTCGGCGGCGGCCTGGCGGGGGTGTTGGCTGCGGAGGTGGGCGGCCTGGAGGTGCAGTGCGTG
CACGGAGTGCGGGGCGGCTCGGATCGGTCGCGACGCCGGCATGCTCTCCTCTGCCCCGGATCTGGGC-AGGGG-CCTGAC
CCAAGGCGCGGGGCGGGCTGGTCGCGGTTCCTTCGGTCTCTCGTGCGGCATGGGGTGTCGACCGATGCAGGTTCTGCTGC
CCGATGGCTGATGTCTCGGAGCTACAGGCCCAGTTCCGCCCAGATCTCGCTGTCTCTGGCGGCTCTGCTCGTCTGTGAAG
GTCAGGACGAGGTGGCGGTGGCTGTTCAGGAACG----------------------------------------------
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>chr7D_669
--------------------------------------------------------------------------------
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----------------------------CCCCCGCGTCGTTCTCCCCCAGGGCGACTCGGGCGGCGCCGCTCCTCCCGGC
GCAGCAGGCCCCCTCTCTCCAGCTTCCCCTCCCCTCGCCGCCGCCAAACGGACTCCACCGGGAATTGCCCCTACGGATCC
AGCGGCGGCGGGGATTTGGCGATC--------------CGGGCGGGGGCTCGTGTTCTGGCGGCCGCCACGGCGCTTCTC
CGTGCATGCTGCGGGTGCTCGGCGGCGTCCTGGCGGGGGTGTTGGCTGCAGAGGTGGGCGGCCTGGAGGTGCAGTGCGTG
CACGGAGTGCGGGGCGGCTCGGGTCGGTCGCGGCGCCTGCATGCTCTCCTCTGCATCGGATCTGGAC-GGGGG-CCTGGC
CCAAGGTGCGCGGCGGGCTGGTCGCGGCTCCTTCGGTTTCTCGTGCGGCATGGGGTGTCAGCCGATGCAGGTTCGGCTGC
ACGATGGCTGATGTCTCAGGGCTATAGGCCCAGTTCCGCCCAGATCTCGCTGTCTCTGGCGGCTCTACTTGTCTGTGAAG
GTCAGGACGAGGTGGCGGTGGCTGTTTAGGAACAGGGTGGCGGTTCGCTCCTGAGTGCTTGGCCGAGGTGGGTTGCGGTG
AGTGGTGGTGGTG------------------------GAGATGTACTGGCGGTGGGCGGTGGTGAGGATTGCCGCTCGAC
TGTTGTTGGCTCTGGTGCTCTCTTCTGGTCGTGTCGAGGCA-GCTGGCCCAGGACCTCCCAGATCTTGCGTCCTTGCTGG
CTCGGGTCGGCCATGACAAGCA-TGAGGCGATGTGGTGGTTCCTGCCCGGCGGCGTGGTGGCGGCTCGCTGCCGGGAGCA
CGACTGGGCATGGCAGGAGGGTGGAGGTTGGCGGATGGTGGATGTGGTGGACTGGCTGGTTTGGTCAGTGGTGTGGGAGA
CGATGCC-GGGCGAAAGTCTGTCTCTGGCTATGGTCGGAGCCAGCAGCGACGGCGTCCGT-GGCGTCGCTGCCTTCTTGA
AGGCGCTGCTGCGGTGATGCGCTCCTCTCCCTTACCGTCCCTAGCTCCATGGGAAACCTTAGATCCGTGCTCTGGCGGAT
CGGATGATGGCGGCGGCTTGCGTCGTGTCCCTCTTGGGGGCATCATTTTGGAGCAGGGATCAGCCGGAGTGACTAGTGTG
TGGTTGATGGTGGTGTTCTGTAGGGGTTCGGCGGCGGTGCCTTTGTGTCGTCCCTGTTGCTGTGCAAGCTCAAGACCCTC
CCATGGCTGCCGTTTTGTTGCGGTGAGCTTCGTGCCCTTGGTGTTGTCTCGGTTCTTCTTTGCTCAATGACG-TGCAAGA
AGCCTCCCCATCCTGCTAATCGTCCCAAAC-TCAC-TGCCGGAGCTCCCAGCCAAGGTTCGTGTTTGGCACTCGTTGATT
GTGGTG-CTTCTGTGTTGTGCCGTGGGTTTGGTATGCATGCCGATGCGGTGCGTTAGGTTGCTCGCAA-GTCTTGGTATT
GTGATCCCTCGATGATACCCCACAACTACTTGTGTCTTTCGTGGTGATGGTCCTCTTAGTCTGCTAGGTATGTCCTGCCT
TATGTTGAGTGTCTTGTTCTTCTCCT--TTCTTGTAACAATGTTACTTGTATGGTTTTCGGCCCGATTTTCCTAT--AAC
CGGTTCAATTTGTTCAGGTTTTCGATCCGGTTTCCTTTATAAACTGGATCACTCTCCTGGCATAATGGCCACTTTGAGTA
ATATATTCAGGTGGAGGGACTCCTCCCCAGGTGAT-TCTCAAAAAAA------------------------------
>chr7A_834
TTAT----------------------------------------------------------------------------
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------------------------------------CACGGGCGGGGGCTCGTGTTCTGGCGGCCGGCACGGCGCTTCTC
CGCGCTTGCTGCGGGTGCTCGGCGGCGGCTTGGCGGGGGTGTTGGCTGCGGAGGTGGGCGGCCTGGAGGTGCGGGGCGTG
CACGGAGTGCGGGGCGGCTCAGATCGGTCGCGGCGCCGGCATGCTCTCCTCTGCCCCGGATACGGACGGGGGG-CCTGGC
CCAAGGCGCGCGGCGGGCTGGTCACGGCTCCTTCGGTCTCTCGTGCGGCATGAGGTGTCGGCCGATGCAGGTTCTGCTGC
CCGATGGCTGATGTCTCGGGGCTTCATGCCCAGTTCCGCCCAGATCTCGCTGTCTCTGGCGGCTCTGCTCGTTTGTGAAG
GTCAGGACGAGGTGGCGGTGGCTGTTCAGGAACGA------------------AGTGCTTGGCCGAGGTGGGTTGCAGTG
GGTGGTGGTGGTGC---------------------TGGAGATGTACTGGCGGTGGGCTGTGGTGAGGATTGCCGCTCGGT
TGCTGTTGGCTCTGGTGCTCTCTTCCGGTCGTGTCGAGGCATCCTGGCCCAGGACGACCCATATCTTGTGTCCTTGCTGG
CTCGGGTCGACCATGACGAGCAGTGAGGCGATGTGGTGGTTGCTGCCCGGCGGCGTGGTGGCGGCTCGCTGCCGGGAGCA
CGGCAGGGCATGGCAGGAGGGTGGAGGTTGGCGGATGGTGGATGTGGTGGACTGGCTGGTTTGGTCAGTGGTGTGGGAGA
CGATGCC-GGGCGAAAGTCTGTCTCTGGCTACGGTCGGAGCCAGCAGCGACGGCGTCCGTGGGCGTCGCTGCCTTCTTGA
AGGCGCTGCTGTGGTGATGCTCTCCTCTCCCTTACCGTCCCTAGCTCCATGGGAAACCTTAGATCCGTGCTCTTGCGGAT
CGGATGATGGCGGCGGCTTGCGTCGTGTCCCTCTTGGGGGCATCATTTTGGAGCAGGGATCAGCCGGAGTGACTCGTGTG
TGGTTGATGGTGGTGTTTTGTACGGGTTCAGCGGCGGTGCCTTTGTGTCGTCCCTGTTGCTGTGCAAGCTCAAGACCCTC
CCATGGCTGCCGTTTTGTTGCGGTGAGCTTCGTGCTTTTGGTGTTGTCTCGGTTCTTCTTTGCTCAATGACG-CGCAAGA
AGCCTCCCCAACCTGCTAATCGTCCTGAA-TTCAC-TGGCGGAGCTCCCAGTCAAGGTTCGTGTTTGGCACTCGTTGATT
GTGGTG-CTCCTGTGTTGCGCCGTGGGTTTGGTATGCACGCCGGTGCGGTGTGTTAGGTTGCTCGCAA-GTCTTGGTATT
GGGATCCCTCGATGAAACCCCACAACTACTTGTGTCTTTCGTGGTGATGGTCCTCTTAGTCTGCTAGGTATGTCTTGCCT
TATGTTGAGTGTCTTGTTCTTCTCTT--TTCTTGTAACCTTGTTACTTGTATGGTTTTCGGCCCGGTTTTCCTAT--AAA
CGGGTCAGCTTGTTTAGGTTTTCGATCCGGTTTCCCTTATAAATTGAAACACTCTCCTGGCATAATGGCCACTTTGAGTA
ATATATTCAGATGGAGGGACTCCTCCTCCGATGAT-TCTCAAAAAAAAAA---------------------------
>chr2A_933
GGTGG---------------------------------------------------------------------------
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----------------------------------------------------------CGCCCTGGAGGTGCAGGGCGTG
CACGGTGAGCGGGGCGGCGCAGATCGGCCATGGCGCCTGTGTGCTCTCCTTTGCTACGGATCTGGAT-GGGGGT--TGGC
CACGGGCGCGCAGCGGGCTGGTCACGGCTCCTTGGCTG-CTTGTGCGGCGCGGGGTGTCGGCCAATGCAGGTTCTGCTTC
CC-AAGACTGTTGTCTTGGGGCTGCAGGCCAGCGT-CGCCCAGATGTCACTATCTCTGGCGGCTCTGCTCGTCT-TGATG
GTCGTGGCGACGTGGCGGTGGCTATTCAGCAGCAGGGTGGCGGTTCGCTT-TGAGTGCTTGGCCGAGGTTGGTGGCAGTG
GCTGGTGGTGGTG------------------------GAGGTGTTCTGGCGGTGGGTGGTTCTAAGGAATGGAGCTCGGC
TGTTGTTGGCTCTGGTGCTTTCTATCGGAGGTGT-GAGGCACGCTGGCCCATGACCTCGCAGATCTGACGTCCTTGCTTT
CTCGGGCCGGCCATGACGAGAAGTG--GTGATGGGGTGGCTTCTGCCCGGTGGCGTGGTGGCGGCTCGCTGCCGGGAGCA
CGGCTGGGCATGGCAGGAGGGTGGAGGTTGGTGGGTGGTGGAAGTGGTGGACCCGCTGG-TTGGTCAGTGGTATGGG---
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>chr3D_1327
--------------------------------------------------------------------------------
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------TGGCTCTGGTGCTCTCTTCCGGTCGTGTCGAGGCATCCTGGCCCAGGACCGCCCAGATCTTGCGTCCTTGCTGG
CTCGGGTCGGCCATGACGAGCAGTGAGGTGATGTGGTGGTTGCTACCCGGCGGCGT------------------------
-GGCTGGGCATGGCAGGAGGGTGGAGGTTGGCGGATGGTGGATGTGGTGGACTGGCTGGTTTGGTCAGTGGTGTGGGAGA
CGATGCC-GGGCGAAAGTCTGTCTCTGGCTACGGTCGGAGCCAGCAGCGACGACGTCCGTGGATGTCGCTGCCTTCTTGA
AGGCGCTGTTGTGGTGATGCGCTCCTCTCCCTTACCATCCCTAGCTCCATGGGAAACCTTAGATCCGTGCTCTCGCGGAT
CGGATGATGGCGGTGGCTTTCGTCGTGTCCCTCTTGGGGGCATCATTTTGGAGCAGGGATCAGCCAGAGTGACTAGTGTG
TGGTTGTTGGTGGTGTTCTGTAGGGGTTCGACGGCGGTGCCTTTGTGTCGTCCCTGTTG---------------------
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>chr4A_1807
--------------------------------------------------------------------------------
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-------TGGTGGTGTTCTGTTAGGGGGCGACAGCGGTGCCTTTGTGTCGTCCCTGTTGCTGTGTAGGCTCAAGACCCTC
CCATGGTCGCCGTTGTGTTGTGGTGAGCTTCATGCTCTTGGGATTGTCTTGGTTCATCTTTGCTCAATGACGACGCAAGA
AGCCTCCCCAACTTGCTAATCGTTCTGAA-TTCCATTGGCAGAGCTCTGAGTCAAGGTTCGTGCTTGGCACTCGTTGATT
GTGGTCACTCCTGTGTTGTGTTGTGGGTTCGGTATGCACGCCGGTGCGATGCGTTAGGTTGCTCGCAAAGTCTTGGTATT
GTGATGCTTCGACGACACCCTACATCTATTTGCGTCTCTCGTGGTGATGGTACTTTTTGCTTGCTAGCTAGGTCCTGCCT
TATCTTGGGCGTCATGTTTCTTCTCACCCTTTTGTAATCTTGTTACTTGTACGGTTTTCGGCCCGGTTTCCCTTATAAAT
GGGGTCAACTTGTTTAGGTTTTCGATCCGGTTTTCCTTATAAACTGGATCACTCTCTTGGCATAATGGCCACTTTGAGTA
ATATATTCAGGTGGAGGGACTCCTCCCCTGGTGATTTCTCAAAAAAAAAA---------------------------
>chr7B_1807
--------------------------------------------------------------------------------
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-------TGGTGGTGTTCTGTAGGGGTTCAGCGGCGGTGCCTTTGTGTCGTCCCTCTTGCCGTGCAAGCTCAAGACCCTC
TCATGGCTGCCGTTGTGTTGCGGCGAGCTTCGTGCTCTTGGTGTTACCTCGGT-CATCTTTGCTCAATGACG-CGCAAGA
AGCCTCCCCAACTTGCTAATCG--CCGAACTTCAC-TGGCGGAGCTCGTAGTCAAGGTTCATGCTTGGCACTCGTTGACT
GTGGTG-CTCCTATGTAGCGTTGTGGGTTCCGTATGCACGCCAGTGCGGTGCGTTAGGTTCCTTGCAAAGTCTCGGTATT
GTG-TCCCTCGACATCACCCCACAACTACTTGTGTCTTTTATGGTGGTGGTCTTGTTAGTCTGCTAGCTATGTCTTGCCT
TTGGTGGGCGCCCTAC--TCTTGTCATCTTCTTGTAACCTTGTTACTTGTACGGTTTTCGGCCCGGTTTTCCTTATAAAC
GGGGTCAAATTGTTTAGGTTTTCGATCTGGTTTCCCTTATGAACCGGATCACTCT-CTGGCATAATGG-CACTTTGAGTA
ATATATTCAGGTGGAGGGACTCCTCCCCCGGTGAT-TCTCAAAAAAAAAA---------------------------
>chr4B_1807
--------------------------------------------------------------------------------
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-------TGGTGGTGTTCTGTAGGGGTTCGGCGGCGGTGCCTTTGTGTCGTCCCTCTTGCTGTGCAAGCTCAAGACCCTC
TCATGGTTGCCGTTGTGTTGCTGCGAGCTTCGTGCTCTTGGTGTTGCCTCGGT-CATCTTTGCTCAATGACG-CGCAAGT
AGCCTCCCCAACTTGCTAATCGTCCCGAAGTTCAC-TGGCGAAGCTCGTAGTCAAGGTTCGTGCGTGGCACTCGTTGACT
GTGGTG-CTCCTGTGTTGCGCCGTGGGTTCGGTATGCACGCCGGTGCGGTGCGTTAGGTTCCTTGCAAAGTCTTGGTATT
GTG-TCCCTCGACATCACCCTACAACTACTTGTGTCTTTTATGGTGTTGGTCTTGTTAGTCTGCTAGCTATGTCCTGCCT
TTGGTGGGCGCCCTAC--TCTTCTCATCTTCTTGTAACCTTGTTACTTGTACGGTTTTCGGCCCGGTTTTCCTTATAAAC
GGGTTCAAATTGTTTAGGTTTTCGATCTGGTTTCCCTTATAAACCGGATCACTCT-CTGGCATAATGGCCACTTCGAGTA
ATATATTCAGGTGGAGAGACTCCTCCCCTGGTGAT-TCTCAAAAAAAAAA---------------------------
>chr4B_1807
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-------TGGTGGTGTTCTGTAGGGGTTCGGCGGCGGTGCCTTTGTGTCGTCCCTCTTGCTGTGCAAGCTCAAGACCCTC
TCATGGTTGCCGTTGTGTTGCTGCAAGCTTCGTGCTCTTGGTGTTGCCTCGGT-CATCTTTGCTCAATGACG-CGCAAGT
AGCCTCCCCAACTTGCTAATCGTCCCGAACTTCAC-TGGCGAAGCTCGTAGGCAAGGTTCGTGCGTGGCACTCGTTGAAT
GTGGTG-CTCCTGTGTTGCGCCGTGGGTTCAGTATGCACGCCAGTGCGGTGCGTTAGGTTCCTTGCAAAGTCTTGGTATT
GTG-TCCCTCGACATCACCCCACAACTACTTGTGTCTTTTATGGTGTTGGTCTTGTTAGTCTGCTAGCTATGTCCTGCCT
TTGGTGGGCGCCCTAC--TCTTCTCATCTTCTTGTAACCTTGTTACTTGTACGGTTTTCGGCCCGGTTTTCCTTATAAAC
GGGTCCAAATTGTTTAGGTTTTCGATCTGGTTTCCCTTGTAAACTGGATCACTCT-CTGGCATAATGGCCACTTCGAGTA
ATATATTCAGGTGGAGGGACTCCTCCCCCGGTGAT-TCTCAAAAAAAAAA---------------------------
>chr5B_1807
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-------TGGTGGTGTTCTGTAGGGGTTCGGCGGCGGTGCCTTTGTGTCGTCCCTCTTGCTGTGCAAGCTCAAGACCCTC
TCATGGTTGCCGTTGTGTTGCTGCGAGCTTCGTGCTCTTGGTGTTGCCTCGGT-CATCTTTGCTCAATGACG-TGCAAGT
AGCCTCCCCAACTTGCTAATCGTCCCGAACTTCAC-TGGCGAAGCTCGTAGTCAAGGTTCGTGTGTGGCACTCGTTGACT
GTGGTG-CTCCTGTGTTGCGCCGTGAGTTCGGTATGCATGCCAGTGCGGTGCGTTAGGTTCCTTGCAAAGTCTTAGTATT
GTG-TCCCTCGACATCATCCCACAACTACTTGTGTCTTTTATGGTGTTGGTCTTGTTAGTCTGCTAGCTATGTTCTGCCT
TTGGTGGGCGCCCTAC--TCTTCTCATCTTCTTGTAACCTTGTTACTTGTACGGTTTTCGGCCCGGTTTTTCTTATAAAC
GGGTTCAAATTGTTTAGGTTTTCGATCTGGTTTCCCTTATAAACCGGATCACTCT-CTGGCATAATGGCCACTTCGAGTA
ATATATTCAGGTGGAGGGACTCCTCCCCCAGTGAT-TCTCAAAAAAAAAA---------------------------
>chr1D_1807
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-------TGGTGGTGTTCTGTAGGGGTTCAGCGGCGGTGCCTTTGTGTCGTCCCTCTTGCCGTGCAAGCTCAAGACCCTC
TCATGGCTGCCGTTGTGTTGCGGCGAGCTTCGTGCTCTTGGTGTTGTCTCGGT-CATCTTTGCTCAATGACG-CG-AAGA
AGCCTCCCCAACTTGCTAATCGTCCCGAACTTCAC-TAGCGGAGCTCGTAGTCATGGTTCATGCTTGG-ACTCGTTGACT
GTGGTG-CTCCTGTGTTGCGCCGTGGGTTTGGTATGCACGCCAGTGCGGTGCGTTAGGTTCCTTGCAAAGTCTTGGTATT
GTG-TCCCTCGACATCACCCCACAACTACTTGTGTCTTTTATGGTGATGGTCTTGTTAGTCTGCTAGCTATGTCCTGCTC
TTGGTGGGCGCCCTAC--TCTTCTCGTCTTCTTGTAACCTTGTTACTTGTACGGTTTTCGGCC-GGTTTTCCTTATAAAC
GGGGTTAAATTGTTTAGGTTTTCGATCTGGTTTCCCTTATAAACCGGATCACTCT-CTGGCATAATGGCCACTTTGAGTA
ATATATTCAGGTGGAGGGACTCCTCCTCCGGTGAT-TCTAGAAAAA-------------------------------
>SNPs
S---SSSSSSSSSSSSSSS---------------------------------------S-----S-----------S---
---S--------------------------S-----S-------------------------------------------
-------------------------------------------------S-------S-------------------S--
---------------------------------------------------------------S----------------
------------------------------------S-----S-------------------------------SS----
-------------SS------------------------------------S----------------------------
-------------------------------------------------------------------S--------S---
-----------------------S--S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
-------S----------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S---------------S----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
-------------------S------------------------------------------------------------
----------S-------S------------------------S-------------------S----------------
--------------------------------------------------------------------------------
----------------------------------------------------------SS--------------------
-----------------------S-----S--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_666
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------ACACATTTTGCACACCAGCC------------------------------------------------------
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>reverse_1608
--------------------------------------------------------------------------------
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-------GGGCGAAAGTCTGTCTCTGG-----------------------------------------------------
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-----------------------------------------------------------------------------
