>input_sequence_80645
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-----------------------------------------------ATGAGGCTGCCGAGCCCGTACTCGGGGGTGTTC
AGGGGCGGGTCGACTGCGAGGACGGGGCCGCACGCGCTGCCGCTGGCGCGGATCAAGAAGATCATGAAGCGGTCCGCGCG
GGACGGCAGTGGCGGCGACGGCGCCGGGGCCAGGATGATCTCGTGCGAGGCGCCGGTGGTGTTCTCCAGGGCGTGCGAGC
TGTTCGTCGCCGAGCTGACGCGCGCCGCCTGGGACGCCACGCTTGAGGGCCGGCGCCGGACCGTGCACGCCGAGGACGTC
GCCGCCGCCATCAGGGACACCAACGTCTTCGACTTCCTCGTCGACGTCGTCAAGGCCGGGCCGAGTGACGATGGTGTCAA
TGCTGGGGACGGTGAAGGCAGCGTCGGGCCGGCCGTAGGTGTCCAGGGCGGCATGCAGGGTCGTAGGTTGTGA-------
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>chr1B_1_TraesCS1B01G365500
TCAGCTAACTTTTAGCTAGGAAAACTAGAGTAACGGAGGAGTGTGATGAGGACACTAAGAGGCACCTAATGACGTTAATG
TGTCTATTCGAATGGGATGCACCGAGAATTTAAGCGTCAGATAGTGAAAGAATTAA---TGTTGTTGTTTAGCGTGTCTA
CCAAAGATGGATCGGTCGATTTCCGATTTTCTCTTTTTATTTTGTGTGCTTCTTGTTTCCCACATCCATCGTTTCATC-T
TGTGCCGTCGTGACTCAAACTT-GACATGTCTAAAAGTGCAGATGCCATGTAGA--------------------------
GTACTATTAATCTACCGGTGCACC-------------------------------------CATGACCATGTGGTCACTG
TGGTGTGGTGTGGTGTGTTG-----CCGATTTTGTGCCCATCCACATGC---CTATCT-ACTATGGCGCCAAATGGCACA
GTATCAGACCTCAGGGG-AAAAAAAAGCCAGGCACGGTACCTTGTTTGTTTTGTATACCTTGTACTGCCAATAACGGAAT
ATGCGATAGAAAATAGAATATACTAC---ACTCACTTTAGGTCTTAAAACTGCGCTTTACACCGGTGATTACGTATGACG
ACAACGACGCCTTCCAAATACGGACGCTCCTAGTCCTCGATGCGATCGCCCTCTTTGACCATGGATACGGAAACTCA---
-------CGCAACGCAAGAACCTCGAAAGAAAGCTACGTACATTTCATTTATCTACTCCCATTCGTACACCATCGCGATC
TCAACCACCGTCTCCTGC----------GGTTTGTTTACGTGATCTCTGTACC----ATCG----------ATCGATCGC
TGTCGAGACTGCCGGCCGCGGCCACGCCGCTCGGTTGCCGGCCGGCCATGGCCATGGGCAGCGGCCGCCACGGACACGCG
CTCCCTTGTTCGCG-----GGGTCAAGCGGCATGGGCATATGATATAAGGT-CCGTCCATGGCCGCGCTCGAATGAGAAT
TGCACCGCACGTCCGTTTGTT------AGAGCTTAGC--TACCCAGCAGC------------------------------
-----CTAGCACGCACGGCGAGGCGACTGAACGACGGCG---AGAGGATGAGGCTGCCGAGCCCGTACTCGGGGGTGTTC
AGGGGCGGGTCGACTGCGAGGACGGGGCCGCACGCGCTGCCGCTGGCGCGGATCAAGAAGATCATGAAGCGGTCCGCGCG
GGACGGCAGTGGCGGCGACGGCGCCGGGGCCAGGATGATCTCGTGCGAGGCGCCGGTGGTGTTCTCCAGGGCGTGCGAGC
TGTTCGTCGCCGAGCTGACGCGCGCCGCCTGGGACGCCACGCTTGAGGGCCGGCGCCGGACCGTGCACGCCGAGGACGTC
GCCGCCGCCATCAGGGACACCAACGTCTTCGACTTCCTCGTCGACGTCGTCAAGGCCGGGCCGAGTGACGATGGTGTCAA
TGCTGGGGACGGTGAAGGCAGCGTCGGGCCGGCCGTAGGTGTCCAGGGCGGCATGCAGGGTCGTAGGTTGTGATTATGAA
ATCAAACTATGCCGCGATTAATTGCACTAATAGGATACAAATGTTTCATGATTACAAGCTACATGAAAGATTCAAGATTC
ATATAGCTTTTCTACCCAAAAAGAAA------------------------------------------------------
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--------------TCCCTATTAACTCTGTTTTTTTTGTTTT--------------------------------------
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----------------------------------------------------------------------------GAAC
TCGCTATTCCTCAGTTCTCTGAATATCCGAATCACTTGAGTCGATTCTGTGTGAGAAGAAGAGTGTGGTTTTGTGCATCC
ACGGACATTGCATGCACCCCCGGTTCACCCATGATA---AAAAACTTAGCAAAACATTT--ATTTTTTTTTTGAAACTTT
GTGGATGTGATTATGACCAAATG-TTTAGGTGCTTGTAAATTTTGATGGCGAAATGACATCCGAGGAGCACTGTACAGAA
AAAACAAAGCTTGGGCTGAAAACATGTGAACAGTAACATGGGTGCAGAGCATCATTTGTATTTCGTTTTGTATGGAGATT
ATTTGATGTTTTTTGGTGACCAAACTTTGCAAGATCCTAAAACATTTGCTCATAATCACATCCACAAAATTTCA------
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------------------GAATTTATTTCTATTTTTTTGAATTTACTGTTCACTTCATGGGTGCACTGAAGTTAGGTGTA
GCCATTACTTTCACTGATAAGAACGAAGTCCCAAGTTAGGCTGGTCATAGTGGAGAGTAACTTAGACTAGTAACATACAT
ATGTTACTAGTCTATGTTACTACCTTCATAGTGGGTAGTGTCATAGGTGTGGTAACATAGTTGCCTTCATTTATTACTTT
GTAGACTCATTATGCATTGGAAACCGCTATGTGATGGTAACATATTATGTTACTCTATTTGCCTCTCTCCTCATTAACTA
CTTGCCACATCATCATTTTTGCTTATGTGGCATCTATGTTACTACCTATATTACTCCCACTATGACCAGCCTTATAGGTT
GAAATGTCGCAGCGTCCTCGGTATGGGTGAAAAATGAAGACCGGAAGATGAAGGTCGTTGGTGTCCGCGCCGACGCGCTC
TATTA
>chr1D_1
TCAGCTAACTTTTAGCTACGAGAACTAGAGAAACGGAGGAGTGTGATGAGGACACTAAGAGGCATCTAATGATGTTAATG
TGTCTATTCGAATGGGATGCACCGAGAATTTAAGCGTCAGACAGTTAGCGAATTCATGTTGTTGTTGTTTAGCGTGTCTA
CCAAAGATGGATCGGACGACTTCCGGTTTTCTCTTTTTATTTTGTGTGCTTCTTGTTTCCCATATCCATCGTTTCATCGT
TGTGCCCTCGTGCCTCAAACCTAGACATGTCTAAAAATGCACGTGCCAACTTAAATGCCA--------------------
---------------------------------------------------------------------TGTGGTCA---
--GTGTGGTGTGGTGTGTTG-----CCGATTTTGTGCCCCTCCACATGCATGCTATCT-ACTATGGCGCCAAATGGCACA
TTATCATACCTCAGGGG-AAAAAAATGCCAGGCACGGTACCTTGTTTGTTTTGTATACCTTGTACTGCCAATAACGGTAT
ATGCGACACAGAATAGAATATACTAC---ACTCACTTTAGGTCTTGAAACTGCGCTTTACACCGGTGATTACGTATGACG
ACAACGACGCCTTCCAAATACGGACGCTCCTAGTCCTCGGTGCGATCGCCCTCTTTGACCATGGATACGGAAACTCA---
-------CGCAACGCAAGAACCTCGAAAGAAAGCTACGTACATTTCATTTATCTACTCCCATTCGTACACCATCGCGATC
TCAACCACCGTCTCCTGC----------GGTTTGTTTACGTGATCTATGTACG----ATCG----------ATCGATCGC
TGTCGAGACTGCCGGCCCCGGCCACGCCGCTCGGTTGCCGGCCGGGCATGG-----------AGCCGCGACGGCCACGCG
CTCCCTTGTTCGCG-----GGGTCAAGCGGCATGGGCAT-----ATAAGGT-CCGCCCATGGCCGCGGTCGAATGAGAAT
TGCAC----CGTCCGTTTGTT------AGAGCTTAGC--TACCCAGCAGC------------------------------
-----CTAGCGCGTACGGCGAGGCGACTGAACGACGGCGGCGAGAGGATGAGGCTGCCGAGCCCGTACTCGGGGGTGTTC
AGGGGCGGGTCGACGGCGAGGACGGGGCCGCACGCGCTGCCGCTGGCGCGGATCAAGAAGATCATGAAGCGGTCGGCGCG
GGACGGCAGCGGCGGCGACAGCGCCGGGGCGAGGATGATCTCGTGCGAGGCGCTGGTGGTGTTCTCCAGTGCGTGCGAGC
TGTTCGTCGCCGAGCTGACGCGCGCCGCCTGGGACTCCACGCTTGAGGGCCGGCGCCGGACCGTGCACGCCGAGGACGTC
GCCGCCGCCGTCAGGGACACCAACGTCTTCGACTTCCTCGTCGACGTCGTCAAGGCCAGGCCGAGTGACGATGGCGTCAG
TGCTGGGGACGGCGAAGGCAGCGTCGCGCCCGCCGTAGGTGTCCACGGCGGCATGCAGGGTCGTAGGTTGTGATTATGAA
ATCAAACTGTGCCGCCACTAATTGCACTAATAGGATACAAATGTTTCATGATCACAAGCTACATGAAAGATTCAAGATTC
ATATAGCTTTTCTACCAAAAAAGAAAGAAAAGGAAATGCTTAATATCAACCGGTGGATCGCAACGGCCGCGTCCGCCACC
TTCCCTGGATGACACGCGTCAAGTGAGGGCCTATGTACCATCCTTCATGCAACAGGGGTCATGC----------------
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----------------------------TTCTGAAACATATGCGGTGTTGCAATCAGATGGTCTACGACGGGTTTATGTT
TTACAATAAAACTTCTCTTGCAAAAATAATCTGTAACAAGACCTTAGTTGGAAAAAGTTGCAACAAAACCTCAGTTGCAA
AAATGTTTTTGCAACAAAACAATTGTTGCAAAAAAAATCTGCAACAATACCTGGGTTGCGGAAATTTTTCTGCAACAAGA
CCTGTGTTTCAATGGTGGAGGCACTCTCGGCCGATCGATGTGGCAGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTTTTGGCGAAC
TTGTTGTTCCTCAGTTCTCTGAATATCCGAATCACTGCAATCGATTTTGTGTGAGAAGAA--------------------
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>chr1D_1
TCAGCTAACTTTTAGCTAGGAGAACTAGAGAAACGGAGGAGTGTGATGAGGACACTAAGAGGCATCCAATGATGTTAATG
TGTCTATTCAAATGGGATGCACCGAGAATTTAAACGTCAGACAGTTAGCGAATTCATGTTGTTGTTGTTTAGCGTGTCTA
CCAAAGATGGATCGGACGACTTCCGGTTTTCTCTTTTTATTTTGTGTGCTTCTTGTTTCCCATATCCATCATTTCATCGT
TGTGCCCTCGTGCCTCAAACCTAGACATGTCTAAAAATGCACGTGCCAACTTAAATGCCATGTGGTCAGTGTGGATCCAC
GTACTATTAATCTACCGGTGCACC-------------------------------------CATGACCATGTGGTCA---
--CTGTGGTGTGGTGTGTTG-----CCGATTTTGTGCCCCTCCACATGCATGCTATCT-ACTATGGCGCCAAATGGCACA
TTATCATACCTCAGGGGAAAATAAAAGCCAGGCACGGTACCTTGTTTGTTTTGTATACCTTGTACTGCCAATAACGGTAT
ATGCGACACAGAATAGAATATACTACTACACTAACTTTATGTCTTGAAACTGCGCTTTACACCGGTGATTACGTATGACG
ACAACGACGCCTTCCAAATACGGACGCTCCTAGTCCTCGGTGCGA-----------------------------------
------------------------------------------------------------------------TCGCGATC
CCAACCACCGTCTCTTGC----------GGTTTGTTTACGTGATCTCTGTACG----ATCG----------ACCGATCGC
TGTCGAGACTGCCGGCCGCGGCCACGCCGCTCGGTTGCCGGCCGGCCATGG-----------AGCCGCGACGGCCACGCG
CTCCCTTGTTCGCG-----GGGTCAAGCGGCATGGGGAT-----ATAAGGT-CCGTCAATGGCCGCGGTCGAATGAGAAT
TGCAC----CGTCCATTTGTT------AGAGCTTAGC--TACCCAGCAGC------------------------------
-----CTAGCACGTACGGCGAGGCGACTGAACGACGGCGGCGAGAGGATGAGGCTGCCGAGCCCGTACTCGGGGGTGTTC
AGGGGCGGGGCGACGGCGAGGACGGGCCCGCACGCGCTGCCGCTGGCGCGGATCAAGAAGATCATGAAGCGGTCGGCGCG
GGACGGCAGCGGCGGCGACGGCGCCGGGGCGAGGATGATCTCGTGCGAGGCGCCGGTGGTGTTCTCCAGGGCGTGCGAGC
TGTTCGTCGCCGAGCTGACGCGCGCCGCCTGGGACGCCACGCTTGAGGGCCGGCGCCGGACCATGCACGCCGAGGACGTC
GCCGCCGCCGTCAGGGACACCAACGTCTTTGACTTCCTCGTCGACGTCGTCAAGGCCGGGCCGAGTGACGATGGCGTCAA
AGCTGGGGACGGTGAAGGCAGCGTCACGCCGGCCATTGGTGTCCACGGCGGCATGCAGGGTCGTAGGTTGTGATTATGAA
ATCAAACTATGCCGCGATTAATTGCACTAATAGGATACAAATGTTTCATGATCACAAGCTACATGAAAGATTCAAGATTC
ATATAGCTTTTCTACCAAAAAAGAAAGAAAAGGAAATGCTTAATATCAACCGGTGGATCGCAACGGCCGTGTCCGCCACC
TTCCCTGGATGACACGCCTCAAGTGAGGGCCTATGTACCATCCTTCATGCAACAGGGGCCATGC----------------
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----------------------------TTCTGAAACATATGTGGTGTTGCAAT-----GGTCTACGACGGGTTTATGTT
TTACAATAAAACTTCTCTTGCAAAAATAATGTGTAACAAGATCTTAGTTGGAAAAAATTGCAACAAAACCTCGGTTCCAA
AAATGTTTTTGCAACAAAACAGTTGTTGCAACAAAAAACTGCAACAATACCTGGGTCGCAGAAAGTTTGCTGCAACAAGA
CCTGTGTTGCAGTGGTGGAGGCACTCTCTGCCGATCGATGTGGCAGATCTGATGGCTCGCGACCCGGCGGATGCGTAGAA
CACCCCCAAAAAAAACCCTATTAGCTCTGCTCTTT----TTTTC------------------------------------
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--------------------------------------------------------------------TTTTTTGCGAAC
TCGGTATTCCTCAGTTCTCTGAATATCCGAATCACTGCAATCGATTTTGTGTGAGAAGAA--------------------
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>chr1A_55
------------------------------------------------------CTAAGAGGCACCTAATGACGTTAATG
TGTCTATTCGAATGGGATGCACCGAGAATTTAAGCGCCAGACAGTGAATGAATTGA---TGTTGTTGTTTAGCGTGTCTA
CCAAAGATGGATCGGCCGATTTCCGGGTTTCTCTTGTTATTTTGTGTGTTTCTTGTTTCCCATATTCATCGTTTCATTGT
TGTGCCGTCGTGCCTCAAACTT-GACATGTCTAAAAGTGCACATGCCGACTTAAATGCCACGTAC---------------
--ACTATTAATCTACTGGTGCACATATCGACTCAATCATGTTGGCAAAGTCACCACACACTCATGACCATGTGGTCA---
--CTGTGGTGCAGTGTGTGTTATTACCGATTTTGTGCCCCTCCACATGCATGCTAAGCCACTATGGCGCCAAATGGCACG
GTGTAATACCTAAGG--AATAAAAAGAACTGGCACGGTCCCAA-TTTGTTTTTTATACCTTGTACTGCCAATGACGGAAT
ATGCGATACAAAATAGAATATACTAC---ACTCACTTTAGGTCTTAAAACTGCGCTTTACACCGGTGATTACGTATGGCG
ACAAAGACGCCTTCCAAATACAGACGCTCCTAGCCCTCGGTGCGATCG-CCTCTTTGACCATGGATACGGAAACTCAGGC
AACGCAACGCAACGCAAGAACATGGAAAGAAGGCTACGTACATTTCATTTATCTACTCCCATTCGTACACCATCGCGATC
TCAACCACCGTCTCCTGC----------GGTTTGTTTACGCGATCTCTGTACGATCGATCG----------ATCGATCGC
TGTCGAGACTGCCGGCCGCGGCCACGCCGCTGGGTTGCCGGCCGGCTATGG-----------AGCCGCGACGGTCACGCG
CTCCTTTGTTCGCG-----GGGTCAGGCGGCATGGGCAT-----ATAAGGT-CCGTCCATGGCCGCGGTCGAATGAAGAT
TGCAC----CGTCCGTTTGTT------AGAGCTTAGCGCTACCCAGCAGCCTAGC-------------------------
---AGCTAGCACGTACGGCGAGGCGACTGAACGACGGCGGCCAGAGGATGAGGCTGCCGAGCCCGTACACGGGGGTGTTC
AGGGGCGGGTCGACGGCGAGGACGGGGCCGCACGCTCTGCCTCTGGCGCGGATCAAGAAGATCATGAAGCGGTCGGCGCG
GGACGGCAGCGGCGGCGACGGCGCCGGGGCGAGGATGATCTCGTGCGAGGCGCCGGTGTTGTTCTCCAGGGCGTGCGAGC
TGTTCGTCGCCGAGCTGACGCGCGCCGCCTGGGACGCCACGCTTGAGGGCCGGCGCCGGACCGTGCACGCCGAGGACGTC
GCCGCCGCCGTCAGGGACACCAACGTCTTCGACTTCCTCGTCGACGTCGTCAAGGCCAGGCCGAGTGACGATGGCGTCAA
TGCTGGGGACGGTGAAGGCGGCGTCGCGCCGGCCGTAGGTGTCCACGGCGGCATGCAGGGTCGTAGGTTGTGATTATGAA
ATCAAACTATGCCGCGATTAATTGCACTGATAGGATACAAATGTTTCATGATTACAAGCTACCCAAATGTTTCATGATTA
CAAGCGAACGGGGCTCTGGTGCGGGTGCTCACTGGCATCAACTGGCGTGCCTGGACTACGGCGGCGACCTCAACTAGCGA
TGTACTTTGATTTCATGGGTGTGGAGCGGTGGAAGGGCACCTAGGCAGCGCGGGTAACGGCTGCTCTTCAACCCCACGAG
GGAGGTCCAGGCGCAGCGCTGCCGCTCCCTGTGTCCTTCCTATGGCGGGCGACGACACATTCCCGGGTCCCTGCGAGCGA
CGGTAGCACGGAGTCCAACAGTGTACAGGAGGAGCTCCAGAGCGCTCTGCTCCTGACTAGCAGCGACAGGGAAGAATTGA
CGCAGGAGGATGTGCCCTGCTACCTTTTGGGACCGAGCAAAGAGAGGTGAGAATTTTTGTTATTAGTTTTTTCGCTGCAT
GGGTCCCACATGTAAGGACGGGGTTCAAAAGGTGAGGTGGCAGTGTCCAGTCAACAGTCAATGCGGTCAAAACCACTTGA
GCGAGTTAAAACCATGAGGAGGGTTGATTTCTGAACCACATGGTTAGTCCGGGGTATAGCTTGGCGGTTTTGAAGTTTGA
GGTTGAAAATTAAACCGAGTGGTTAGTTCAGGATTGTAATATGGACTTTTCTA---------------------------
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-------AAAAAAATCCCTATTAACTCTGCTTTTC----TTT--------------------------------------
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----------------------------------------------------------------------------GAAC
TCGCTATTCCCCGGTTCTCGGAATATC--------------------TGTGTGAGAAGAAGAGTGTGGTTTTGTGCATCC
ACGGACAT----TGCACCCCCGGTTCACCCATGCATGATAAAAACTTAGCAAAACATTTCAATTTTTTTTTGGAAACTTT
GTGGATGTGATTATGACTAAATGTTTTAGGTGCTTGTAAAATTTGGTGGCGAAATGACATTCAAGGAGCTCTGTACAGAA
AAAACAAAGTTTGGGCTGAAAACATGTGAACAATAACATGGGTGCAGAGCATCATTTGTATTTCATTTTGTATGAAGATC
ATTTGATGTTTTTTGGTGACCAAACTTTGCAAGGTCCTAAAACATTTGCTCATAATCACATCCACAGGTTTACACACAGG
CCGCGTCTCCCCCTCGGCCCCCGCGTCGCCTGACCGGGCGACTCGGGCGGCGGCTAGGGATCCCGAGCGCCGCCTCCCCC
ACCCCTTCTCTCCCTCCTCGTCGCCACCTTAGGTGGTCTCCGGGCAAGCCCGCGCGGCCGCCAGTGACGGTGGCGGCGAG
GCCCTCGTCGCTCCTGCAGCGGAGGATCTGGATCCCAGGGGCGGCGGCCCCTCCCGGCGTGGCGTCGCCGTTCTTGCCCT
GAACGGCGCTCGCGGAGGGCTCTGGCCGGCGTCCTCGACTGCGGGGGCGGTGGGGCGTCGGCGGCCGGTGGCTACAGCGT
GGAGGCCTCCTCTTCCTCGCCAGATCTGGAGGTTTGCCGCCCCCAATTCGCGCCCTCCCCCTCTGCGCTTGTTCCCGCGG
CTGGTCGCTGGATCCGGTGGAGTTTGGGGCTGGTGTTGCAGATCGGACCGGGGGAAACCCCTGGCCGGCTAGTTCGGCCC
GACATCGACGTCGGCCTTGGGCGACGTTTCTTTCTTGGAGGCGATGTCGTGGTCTCCTTCTCCCCACCTCCGTTCCCTCT
CCCGGGTGAAAACCCAAAATCCAGCAGGATTGGGCAGCGGTGGCGCCGTGTGTGTCATTTCCTCCATGGAGGCGTTGTCT
GGGGAGTGTGGATTCGGGCGTAGGGTTGCTGAAGGTGGGGTTTTTGGCCGGCAGCAGGTGCAGTGCCTCTCGCTGTCCCG
CTGTCCACCTCTCTGTTGTTGCTCGGCAGCTTTCCTGCAGCCTTCAGACGTTCTTGGCGCGTGATGGTGTGGTCGGCTGG
GTGTTTGTCCCAGCGGCATTCCTCCTGTGCCTTTGGCGCCTGAGGGTTGCGGTCATCGGTTTATGCTAGTAGTGCCCTTT
CTTAGTACCTATTGTAACTAGCTCTCCGATGTGTTGTAAGTTCAAAGTGCCCCCTTGTATCTTTTGGGCTTTTCTTGTTG
TTCGTTTTTGTGTCGTTTGTCGTCATTTGGCGTCATGGTGGCGTTGATGGCGGAGGAGCCTGCCAAGGTTGGCACCACAA
TCTGCTTGGAGATGAACCAGTGGAAGATGGTGGAGACGACAGTGAGTGCGTCAGACCGGTTTATGCCCCAGACCCGGTAT
GTGGCTAGGCTGGGGATTCCGGCTTTCGATGTTAGGATTAGGTGAGTGGTCTGGGTAGTGGCCCAACTAGCACCCCTTCA
TCATATGGATAGGAGTAGCGGCATATGTTGTCTAGATGGTGGATTCAGGCTTATTGTTGTAACACTTTGTAAGGTCCTCG
ATAATAATCAATAAAGTGGCCGTATGCATCTCCCAGATGCAGAGGCCGGGAGTCATCCTCCTTTTCTAAAAAAAAATAAT
CACATCCACGAAGTCTCGGAATTTATTTCTATTTTTTTGAATTTACTGTTCACTTCATGGGTGCACCGAAGTTAGGTGTA
GCCACTACTTTCACTGTTAAGAATGAAGTCCCAAGCTAG-----------------------------------------
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>chr1B_638
GCAAGCAACA----------------------------------------------------------------------
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------------------AACCTCCAACGAAAGC----TACACCTCATTTCTCTACTCGCATTCGTACACCATCTCGATC
TCAACCACCGTCTCCCACGTCTTCCATGGATTTGTTTACGCGATCTCTA------------------------CGATCGC
TGTCGAAGCTGCCGGCCCCGGCCACCTC---CGGTTGCGGGCC------GGCCATGGACAGCAGCCGCCACGACCACGCG
CTCCCTTCCTTGT--TCGCGGGTCAAACGGCATGCGTAT-----ATAAGATCCCGTCCATGGCCGCGGTCGATTGGAGGT
TGCAC----CGTTCATTTGTT------AGAGCTTAGC--TAGCTAGCAGCAGCCTTGCACGGCGGCGAGAGGATTAGAC-
-----------------CGGCGGCGAT-------------CGAGCGGATGAGGATTTCGAGGCCGTACTCGGGGGTGTCC
AGAAGCGGGGCGACGGCGAGGACGGGGCCGCACGCGCTGCCGCTGGCGCGGATCAAGAAGATCATGAAGCGGTCCGCGGG
GGACGGCAGCGGCGGCGACGGCGCCGGGGCGAGGATGATCTCGGGCGAGGCGCCCGTGGTGTTCTCCAGGGCGTGCGAGC
TGTTCGTCGCCGAGCTGACGCAGGCCGCCTGGGCCGCCACGCTCGAGGGCCGGCGCCGGACCGTGCACGCCGAGGACGTC
GCCGCCGCCGTCAGGGACACCGACCTCTTCGACTTCCTCGTCGACGTCGTCAAGCCCAGGCTAGGTGACGATGGCGTCGA
TGCCGCGGACGGCGAAGGCCGGGTCGCGCCGGGCGCCGGTGTCCACGGGGGC----------------------------
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>chr1D_638
GCAAGCAACA----------------------------------------------------------------------
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------------------AACCTCCAACGAAAGC----TACACCTCATTTCTCTACTCGCATTCGTACACCGTCGCGATC
TCAACCACCGTC----------TCCACGGATTTGTTTACGCGATCTCTA------------------------CGATCGC
TGTCGAAACTGCCGGCCCCGGCCACCTC---CGTC-GCGGGCC------GGCCATGGACAGCAGCCGCCACGACCACGCG
CTCCCTTCCTTGTTCTCGCGGGTCAAACGGCATGCGTAT-----ATAAGATCCTGTCCATGGCCGCGGTCGATTGGAGGT
TGCAC----CGTTCGTTTGTT------AGAGCTCATAGCTATAGATAGTT--CCTTGCACGGCGGCGAGAGGATTAGCTA
GGACC-------------------------------GCGGCGAGAGGATGAGGATTTCGAGGCCGTACTCGGGGGTGTCC
AGAAGCGGGGCGACGGCGAGGACGGGGCCGCACGCACTGCCGCTGGCGCGGATCAAGAAGATCATGAAGCGGTCGGCGGG
GGACGGCAGCGGCGGCGACGGCGCCGGGGCCAGGATGATCTCGGGCGAGGCGCCCGTGGTGTTCTCCAGGGCGTGCGAGC
TGTTCGTCGCCGAGCTGACGCAAGCCGCCTGGGCCGCCACGCTCGAGGGCCGGCGCCGGACCGTGCACGCCGAGGACGTC
GCCGCCGCCGTCAGGGACACCGACCTCTTCGACTTCCTCGTCGACGTCGTCAAGCCCAGGCCAGGTGACGATAGCGTC--
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>chr1A_674
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--------------------------------------------TCATTTATCTACCCGCGTTCGTACACCATCGCGATC
CCAACCACCGTCTCCCAT----------GATTTGTTTACGCGAATCTCTACATGCGCGAAAGATCAATCATACCGGTCTC
TGTCGAAACTGCCGGCCCCGGCCACCTC---CGGTTGCGGGCC------GGCCATGGACAGCAGCCGCCACGACCACGCG
CTCCCTTCCTTGT--TCGCGGGTCAAACGGCGTGCGTAT-----ATAAGATCCCGTCCATGGCCGCGCTCGATTGGAGGT
TGCAC----CGTTCGTTTGTTTGCTATAGAACTCATAGCTATAGATAGCT--CCTTGCACGGCGGCGAGAAGATTAGGTA
GCTAGCTAGCACCGGGTCGGCGGCGAT-------------CTAGAGGATGAGGATTTCGAGGCCGTACTCGGGGGTGTCC
AGAAGCGGGGCGACGGCGAGGACGGGGCCGCACGCGCTGCCGCTGGCGCGGATCAAGAAGATCATGAAGCGGTCGGCGGG
GGACGGCAGCGGGGGCTACGGCGCCGGGGCCAGGATGATCTCGGGCGAGGCGCCCGTGGTGTTCTCCAGGGCGTGCGAGC
TGTTCGTCGCCGAGCTGACGCAGGCCGCCTGGGCCGCCACGCTCGAGGGCCGGCGCCGGACCGTGCACGCCGAGGACGTC
GCCGCCGCCGTCAGGGACACCGACCTCTTCGACTTCCTCGTCGACGTCGTCAAGCCCAGGCCAGGTGACGACGGCGTC--
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>SNPs
---------------------S--------S-------------------------------------------------
-----------------------------------------S------S-----S-------------------------
---------------S---------S------------------------------------S-----------------
------------S----------------------------S------SS-SS---------------------------
-----------------------------------------------------------------------------SSS
SS-------------------------------------S----------------------------------------
------S-------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
---------------------------------------------------------S----S----------S------
---------------------------------------SSSSS------------------------------------
-----SSSS-----------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------S-----
--------------------------S------------------S----------------------------------
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----------------S---------------------------------------------------------------
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-----------------------------S-----SSSS-----------------------------------------
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------------------------------------SS-S------S---------------------------------
--------SSSS---------------------SSS-----------------------------------S--------
-----------------S----------------------S----S--------------S-S------S----------
---------S----------------------S-------------------------------S---------S----S
---------------------------------S--------------------------------SSS--S--------
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------------------------------------------------------------------S-------------
----S-----------S------S-----------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_253
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-------------------------------------------------------------------------TTCATCT
TGTGCCGTCGTGA-------------------------------------------------------------------
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>reverse_2941
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------------------------------------------------------------CCGAGGAGCACTGTACAGAA
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