>input_sequence_80573
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---------------------------------------------------AGGAAATATGGACAGAGATCAGGCGCGCG
TCTCTCTGCTTGTAGTTGGAGTGCTGCTCACCGGCACTGTGATTGCAGTGCTCGCAGCCAGTCCAGCCGCCGGCGACACC
AGTGCTGAGCCTGGGCTAGCCGGCAGCATGGGCACCGCCTACAGAGTCGACGCGGCTACGGCGCCGCAGAAGCTCACACC
GGTGGTGCACCGTCGCGTGCTCGCCAGCCTCGGCAACTCGGTCTTCGACCCTAACAGGCCGGCATGCACCGGGCAGTGCG
GGGGCGCGGGGCAGCCGTACACCGGCCGGGGATGCGTGCGTGCGTACCAGTGCCGCGGCTAGCGCTAAGTTAGCACCGCA
TCTGACAAGACGCACCGACGCAAGCTCACTCGATGGCATGCCGTCAAACTTGTACGCGTCCCGAATAGTACGTGCATAAA
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>chr2A_1_TraesCS2A01G276700
AAATAATGAGTCTATAACCTAATAAATACATTGTTGCATGACATTATATAGATCTTCCTGCCCACTGTAGAGGTAGTAAT
ATAGTTTAGGAAAGTGTGTGTAAGTTACTAGACTATATTCTTGCCCATTGTGACCACCCTAAAAACACTTCCAGCAGTCT
CGGCTTCACTGCACAGGTCAATAAATCCATAGGCCCGCTTTCAGGTATAACTTTGCTGTATATCCAATGTATCTATCTCG
CGAAAAATGATTCAGTCATTTAATGGCTCGATCTGGGGAGAGTAACGGCCGGGTAAGATTTCAGTGGGTGGAGCACTTAT
GTGCTACAAATCCGTGTCCTTATGGTTCCTCCAGACTCTATTCTGAATGTAATTGCGGATGAAACTCTGGACTTTAATAC
TTCCTCTTTTTTTTTAGTTTGCATATAAGATTTAGTCAAAGTCAAACTATGTAAAATTTGACTAACTTTATAGGAGAAAA
TATCAATATTCATACTATGAAATCAATATTATTATATGCATCATGAAATTAATTTTCATAATATATAACTTTAGTTTTAT
AGATGTTGATATTTTTTGCTAAAAAGTTGGTCAAACTTTACAACGCTTAACTTTGACCAAACTTATATGCAGACTAAAAA
ACAGAGGGAGTACTTAAATAAAGTGGAGTGTTTACCCTTAAAAAACCCTTTACGATGCACGCCCGATGCTCGACTGTGCA
GTTCCGCAAATTATATGTGGGATGTCGTAAATTGAATCAGTTTTCGTTATCTCCTAGACCGGTTGGAAGAGAAGGTTCCA
AAAGTGTGTCTGCCCCATAATTTGCAGTGAAAATTGGTTAGCTGATGATCTGTTTCAGGTATCTTTGGACCAAAAGTTGC
ACCAATAAATCGAGCCTGCTGGATCCAGTCGGGGAGACGGGTGTGCCACACTGCACAACTACCATTCATTTATATAAGCT
G----------TGCTCCCATTTATAAGTCCGTGGTCG-TAGCGGGGTTCGCAGGAAATATGGACAGAGATCAGGCGCGCG
TCTCTCTGCTTGTAGTTGGAGTGCTGCTCACCGGCACTGTGATTGCAGTGCTCGCAGCCAGTCCAGCCGCCGGCGACACC
AGTGCTGAGCCTGGGCTAGCCGGCAGCATGGGCACCGCCTACAGAGTCGACGCGGCTACGGCGCCGCAGAAGCTCACACC
GGTGGTGCACCGTCGCGTGCTCGCCAGCCTCGGCAACTCGGTCTTCGACCCTAACAGGCCGGCATGCACCGGGCAGTGCG
GGGGCGCGGGGCAGCCGTACACCGGCCGGGGATGCGTGCGTGCGTACCAGTGCCGCGGCTAGCGCTAAGTTAGCACCGCA
TCTGACAAGACGCACCGACGCAAGCTCACTCGATGGCATGCCGTCAAACTTGTACGCGTCCCGAATAGTACGTGCATAAA
CCCCTTGGTAGTTGTTAT---AGTACTAGTTG-ATTGGCCGTAACTCGTAAGTGATTGATCCTTGTACGTGATAAATTTG
TTATTGTTGCTTGGTGTAAAATGTTCTCATGTCTAATGCTAGATTATACGTTATTCCTAGCCAGCGGC------GCACTT
GAGTTTTCTCCAAAATGCGTGCATATATTTACACAACTTCTTAAATGAACAATATCATTACGACGTCCTAAGAATATACT
AGTAGATGGTGTGCATTTGACAGCAATGCAGTTGATTTAGGAAATGGTTTATTTTCAACCGGCTGATAGCAGCGACGCGT
GAGTCGCCTTGTCCTAGCGACGCGTGTCCCACATGGACCCGGCATCGCACACGGCTTATCCGCTCCTTCAAATCCCAATC
TTCTTTTGCCGACGCAGGAACAACAAGCCTCCATCGGCCACTGGTCTGTCGTCACCAACGGCAGCCACCGCTGCAGGAGC
CAACCAATCCTGCTGCAGGCAGCAGGCACCACCACCTGTTGCAATCGCTCCACTTGCTTCTCTTCTTTTCTTCTAGACGC
AAGCACAACAACGCTTTCCAAACCCAGTATGTGGCTCAGCTGAGGCCTCCGATTTTAGATGTTAGGCTTTGGTGCGATGT
CTGTTTGGTATTAGACTCGAACTATCGGCACCCCTTCATCAAGTGAATAGAAGTAGTGACAGTTGTTGCTAAGATGGTGG
GGTGACTTCAGACTACCCGATGTACTACTTTGTAAGGTTGTTGTGAATAATTAATAAAATGGTTGCATGCATCGCCCAGA
TGCAGAGGCCGGGGGTAATCCTCGTTTAAAAAAAAGCACAATAGCGCTGCGACCCATGATCTAGCTGCCGGCCAGGCACG
TTGCAATGCGATTCTCGCCACAGCGGCGGAGCTGCAATGCGGCAAGCGGCATGCGACCCGTGGAGCCAGAGCCGTTGGCG
CTGCGTTGGAGTTCCATCGGGGCTGCGATGGAGCTCGGCCGGAGTTGCAA
>chr2D_684
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-------------------------------------------AACCCTTTACGATGCACGCCCGATGCTCGACTGTGCA
GTTCCGCAAATTATATGTGGGATGTCGTAAATTGAATCAGTTTTCGTGATCTCCAAGACCGGTTGGAAGAGAAGGTTCCA
AAAGTGTGTCTGCCCCATAATTTGCAGTGAAAATTGGTTAGCTGATGATCTGTTTCAGGCATCTTTGGACCAAAAGTTGC
AC-------TCGAGCCTGCTGGATCCAGTCGGGGAGACGGGTGTGCCACACTGCACAACCACCATTCATTTATAAGCTGG
CCTCAAGAAGTTGCTTCCATTTATAAGCTCGTGGTCG-TAGTGGGGTTCGCAGGAAATATGGACAGAGATCAGGCGCGCG
TCTCTCTGCTTGTAGTTGGAGCGCTGCTCACCGGCACTGTGATTGCAGTGCTCGCAGCCGGTCCAGCCGCCGGCGACACC
AGGGCCGGGCCTGGGCTAGCCGGCAGCATGGGCACCGCCTACAGAGTCGACGCGGCTACGGCGCCGCAGAAGCTCACACC
GGTGGTGCACCGTCGCGTGCTCGCCAGCCTCGGCAGCTCGGTCTTCGACCCTAACAGGCCGGCATGCATCGGCCAGTGCG
GGGGCGCCGGGCAGCCGTACACCGGCCGGGGATGCGTGCGGGCGTACCAGTGCCGCGGCTAGCGCTAAGTTAGCACCGCA
TCTGACAAGACGCACCGACGCAAGTTCACTCGATGGCATGCCGCTAAACTTGTACGCATCCCGAATAGTACGTGCGTACA
CCCGTTGGTAGTTGTTAT---AGTACTAGTTGGATTGGCCGTAACTCGCAAGTGATTGATCCTTGTACGTGATAAATTTG
TTATTGTTGCTTGGTGTAAAATGTTCTCATGTCTAATGCTAGATTGTACGTTATTCCTAGCCAGCGGC------G-----
-AGTTTTCTTCAAAATGTGTGCATATGTTTACACAACTTCTTAAAG---CAATATCATTATGACATAGTAAGAATATT--
-GTAGATGGTGTGCATTTAACACCAATGCAGTTGATTTAGGAAATGGTTTATTTTCAACCGGCTGATAACAGCGACGCGT
AAGTTGCCTCGTCCTAGCGACGCGTGTCCCGG-TGGACCTGGCAACGCGCACGGCTTATTCCCTCC--------------
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>chr2B_684
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-------------------------------------------AACCCTTTACGATGCACGCCCGATGCTCGACTGTGCG
GTTCCGCAAATTATATGTGGGATGTCATAAACTGAATCAGTTTTCGTGATCTCGTAGACCGGTTGGAAGAGAAGGTTCCA
AAAGTGTGTCTGACCCATAATTTGCAGTAAAAATTGGTTAGCTGATGATCTGTTTCAGGTATCTTTGGACCAAAAGTTGC
ACCAATAAATCGAGCCTGCTGGATCCAGTCGGGGAGACGGGTGT----------ACAACCACCATTCATTTATAAGCTGG
CCTCAAGAAGTTGCTTCCATTTATAAGCTCGTGGTCAATAGTGGGGTTCGCAGGAAATATGGACAGAGATCAGGCGCGCG
TCTCTCTGCTTGTAGTTGGAGTGCTGCTCACCGGCACTTTGATTGCAGTGCGG---------------------------
----------CTGGACTAGCAGGCAGCATGGGCACCGCGTACAGAGTCGACGCGGCTACGGCGCCGCAGAAGCTCACACC
GGTGGTGCACCGTCGCGTGCTCGCCAGCCTCGGCAACTCGGTCTTCGACCCTAACAGGCCGGCATGCATCCGGCAGTGCG
GGGCCGCCGGGCAGCCGTACACCGGCCGGGGATGCGTGCGTGCGTACCAGTGCGGCGGCTAGCGCTAAGTTAGCACCGCA
TCTGACAAGACGCACCGACGCAAGTTCACTCGATGGAATGCCGC-------------------AATAGTGAGTGCGTACA
CCCCTTGGTAGTTGTTATTATAGTACTAGTTGGGTTGGCCGTAACTCGCAAGTGATTGATCCTTGTACGTGATAAATTTG
TTATTGTTGCTTGGTGTAAAATGGTCTTATGTCTAATGCTAGATTGTACGTTATTCCTAGCCAGCGGCGCACTTG-----
-AGTTTTCTCCAAAATGTGTGCATATGTTT--------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------
-----------------------------------------------S--------------------------------
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-----------------------------------------------------------S--------------SSSSSS
S--------------S-----------SS------------S--------------------------------------
-----------------------------------------------------------S--------------------
--S--S-S------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-------S------------------------------------------------------------------------
------------------------S------------------SS------------S-----------------S--S-
------------------------------------------------S-------------------------------
---------------------------------------------S-----------------------------SSSSS
S----------------S--------S------------------SSSS-----------S---S-SS---------SSS
S-----------------S---S---------------------------------------------S-----------
S---S----S--------------------SSS------S----S---S----------S-S----SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_163
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---------------------------------------------------------------AACACTTCCAGCAGTCT
CGG-----------------------------------------------------------------------------
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>reverse_2107
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--------------------------GGCACCCCTTCATCAAGTGA----------------------------------
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