>input_sequence_80515
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---------------ATGGCGCCCTCCAAGCTCGCCCTCTTCCTCGCCATGAATCTGGTCCTCCTCGTGGCAGTGCATGG
CTGCGGGTCG---TGCGGCAACACACCGCCCGTCCCTGTCCCAAGCCCACCGATTGCCGTTCCACCGCCAGCT---CCCG
TGCCGTCTCCGCCTTCCCTCGGCGGCG-GGGGCGGCACCTGCTCAATCGACACTCTGAAGCTGAAGGTTTGCGCCAACGT
GCTGAACCTGCTGAAGCTCAACCTCGGCGTGCCGACGGACGAGCAGTGCTGCCCGCTTCTGAGCGGCCTCGCCGACCTAG
ACGCCGCCGTGTGTCTCTGCACTGCCATCAAGGCCAACATCCTCGGCATCAAGCTCAATGTGCCCGTCGACCTCGTGCTC
CTCCTCAACCAGTGTGGCAAGACCTGCCCCGCTGACTTCACCTGCCCTAGCTGA--------------------------
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>chr5A_1_TraesCS5A01G535600
TATTGTTTCAAAGTGTGTCACCATGTTTCGTTGTGTACCAACAAATAAGGGTACACTAATTTT-----------------
--------------GGATCTGAGTTTACTGCACAATGAAACATTATGGTGTACACAT-TAAAATGAGAGGAAAACCTAAC
ATACCACGCTGAAACAAGAC-AAGTTGTCAAAACCAGAAAACACATAACACGGATTCCAAAGCAATGGTGGATGGTGGAT
TCATATACAGGACATCCCGTGCAGGCTAGAATATCATGTCTCGTGTCTAGATTATTGTCGACTTTGTGAACCCATCAAAC
ATACATGCATGCATATAGGAGTACTTCGAAATTAGTTAACGTGTTAAGCAGTGGCGGAGCTTGGGCCGAATTTGTGGAGG
GGCAAATGGGCTGGAGGGGCAAGAAACATGCTTTTAGTTTGATTTTAACTGGGCATATGGGCTGAATACTAGAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAGCTCCGCCACT
GGTGTTAAGCATCCCAATGATGGCACGCACGTAATATCCTACAATTGTAGTAG---------TAGTAGCAGCAGCAGCAC
TAGTGGTGGCAAATAATGTTTGCAAATTACGGCAAGAGTC-AAACTCGATTGATCATGACATGAAGACGATGCACTTGCA
CTTGCA-CTTGCACTTGCGTG-----------CTACACCCCGGCCTATATGGCTATAAATACCACCCCAAGCAACCCAGG
AAAAGCATCCCAAGCTAGCAAAGCCCACCTAGCGCTCAGCCACAAGCCAGTAGCCCAGTACGCTCTAGCTAGCTACTAGC
GTTATCCACATAGCAATGGCGCCCTCCAAGCTCGCCCTCTTCCTCGCCATGAATCTGGTCCTCCTCGTGGCAGTGCATGG
CTGCGGGTCG---TGCGGCAACACACCGCCCGTCCCTGTCCCAAGCCCACCGATTGCCGTTCCACCGCCAGCT---CCCG
TGCCGTCTCCGCCTTCCCTCGGCGGCG-GGGGCGGCACCTGCTCAATCGACACTCTGAAGCTGAAGGTTTGCGCCAACGT
GCTGAACCTGCTGAAGCTCAACCTCGGCGTGCCGACGGACGAGCAGTGCTGCCCGCTTCTGAGCGGCCTCGCCGACCTAG
ACGCCGCCGTGTGTCTCTGCACTGCCATCAAGGCCAACATCCTCGGCATCAAGCTCAATGTGCCCGTCGACCTCGTGCTC
CTCCTCAACCAGTGTGGCAAGACCTGCCCCGCTGACTTCACCTGCCCTAGCTGATCCATCC--ATCACAAACCATGCATT
TTTTACCTGCATCGCATCATCGTCGTCGTCG---TACTCGTACTTACAATATTTTCTCGTATCCGCATGCACCTATATAT
--TTTCTCGCAATTACAATATGGTAGTATATGTCAGTCGCGTGCATGCATGGGCTCCCTCGCAAGTGCATGCATGCTT--
------CAGTTAGTCATTCCCCATTATGGT-------------ATCTAAGTGCATGATTC--------------------
-------------------------AAGTATTTGTAAACGGGTATATGTACGTGGAATAAAAT-TTTGTTCAGGTTGTC-
-TTTTTATTTATTTTTGTGCGGGTGTTCAGGTTATGTTAACTCGATCCGTGATGTGCCAGCTTGTATATATTGTACG---
----------------------------AAGCATGATCAGATCCACAGCTCTTCACATGCGTTGGCTGCTACTTCATGTT
TC-----TCATCGTGGCCACCTCTTCTTTCC-TTTGCCAGTTACAAAAGCGCGGTA-----ACGTTTTTAAGCTTGCCAC
GTGTTGGCGGCTACATCTTGTTTCTCATTGTG------------------------------------------------
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----------GCT-------------------------------------------------------------------
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--ACGAAGGTATTTCACAACGTACTGTTAGCTAAATCAAGGAAGGAAGAATCACTTAACAGCTTGGGGTACCCATATATC
TGAAATTATCAACAAATATGAATCATATGATATCAAA-TATGTTGATCCATAAGAATGTATGCGTTAAACATATGCATAC
C-------------------------------------------------------------------------------
-------------TATTTATGTTGAGCATCAGATGTTTATGTTAGCAT-----ATAATTTGTGGCTCTCTTTGGCTGGGT
ATGACTCGAGAATGTTTG--AAAAAAGTGAAATGATGAAATTAT------------------------------------
-----------------------------------------------------TTGGATATACATGTCTAGTACCAAACC
AACC-TTTTTTGGCAAATAATTAATGTACTCACATCATTTGGATAT--ACATGTCTTTGAGGAATGGGTACGTCGTCTTC
AACATGCAACTTTACGAATATGTTGGTAAAAGTTTACAGATTGCAATATAATA------AAG-AAACTACAACAAATCTG
GTGATATTATTTTCATCTAACCAACAATAATATTTCCCATGCATAGTCT-GAGTTAAAC
>chr4B_1
TATTATTCCAAAGTGTATCACCATGTTTCGTTGTGTATAGACAAAAAAGGGTGCACTTGTTTT-----------------
--------------AGATC-GAGTTTGTTGCACAATGAAACATTATGAT--ACACTT-TAAAACAAGAGCAAAACCTAAC
GTAACACGCTGAAACAAGAAAAATTTGTCAAAACGAGGAAACACA--ACAT-AATTTCAAAGCAATGGTGGACGTTGGAT
CCATATACGTGATATCCCG----GGCTAGAATATCATGTCTCGTGCCTAAATTATTGTCGAATTTGTGAACCCATCAAAC
ATACATGCAT----ATTGGAGTACATGGAAATTAGTTAACGTTTTATACT------------------------------
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-------------CCAATAATGGTACGCACGTAATATCGTATAATTATAGTAG------TACTAGTAGTAGCAGCAGCGC
TAGTGTTGGCAAATAATGTTTTCAAATTACGGCAAGAGTC-AAACTCAACTGATCATGACATGAACGA--------TGCA
CTTGCA-CTTGCACTTGCGTG-----------TTACACCCCGGCCTA----GCTATAAATACCACCCCAAGCAACCCAGG
AAAAACATCCCAAGCTAGCAAA-CCCACCTAGCGCTCAGCCACAAGCCAGTA--------CACTCTAGCTAGCTACTAGC
GTTATCCACATAGCAATGGCGCCCTCCAAGCTCGCCCTCCTCCTCGCCATGAACCTGGCCATCCTCGTGGCCGTGCATGG
CTGCGGGTCA---TGCGGCAACACACCGCCCGTCCCGGTCCCAAGCCCGCCCATCGCTGTGCCCCCACCAGCT---CCCG
TGCCGTCTCCGCCTTCGCCCGGCGGCG-GGGGCGGCACCTGCTCCATCGACACGCTGAAGCTGAAGGTATGCGCCAACGT
GCTGAACCTGCTGAAGCTAAACCTCGGCGTGCCGACGGATGAGCAGTGCTGCCCCCTTCTGAGCGGCCTCACCGACCTAG
ACGCCGCCGTGTGCCTCTGCACCGCCATCAAGGCCAATGTCCTCGGCATCAAGCTCAACGTCCCTGTCGACCTCGTTCTC
CTCCTCAACCAGTGCGGCAAGACCTGCCCTGCCGATTTCACCTGCCCTAGCTGATCCATCC--ATCACAAACCATGCATT
TCATACTTGCATCA-----TCATCGTCGTCG---TACTTATAATTACAATGTTTTCTTGTATACGCATGCACCTATATAT
--TTCCTCGTAATTACAATATG---GTATATGTTAGTCGCGTGAATGCATGGGCTCCCTCCCTCGTGCATGCATGCTT--
------CAGTTAGTCATTTCTCGTTATGGT-------------A-------------TTC--------------------
-------------------------AAGTATTTGTAAAAGGGTATATGTGCGTGGAATAAAAAGTTTGTTCATGTTTTTC
TTTTTATTTT--TTTTGTGCGGGTGTTCTGGTCGTGTTAACTCGATCCATGATCTGCCAGCTTGTATATATTGTACG---
----------------------------AAGCATGATCAGATACACAGCTCTTCACATGCGTTGGCTGCTACTTCATGTT
TC-----TCGTGGCCT----CTCTTCTTTCC-TTTGTCAGTTACAAAAGCGCGGTATCATAACATTTTTAAGCTTGCCAC
GTGTTGGCAGCTACATCTTTTTTCTCATTGTG------------------------------------------------
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----------GCT-------------------------------------------------------------------
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--ACGAAGGTATTTCACAACGTACTGT-----------------------------------------------------
------TATCAACAAATAAGAATCGTATGATATCCAAATATAATGATACATAAGAATGTATGCATTAAACATATGCATAC
C-------------------------------------------------------------------------------
-------------TATTTATGTTGAGCATCAGATGTTTCTATTAGCAT-----ATAATTTGTGGCTCTCGTTGGCTGGGT
ATGACTCGAAAAAGTTTG--AAAAA--TGAAATGATATAATTATGTAGAACAATATCCTACATAGCCCTGTTAGATGAAT
GAATTACTATCCTTGTAAAAAATTCCAAGGATGTTCTCTATCATTTAAATTCCTGAGAAATTCAGGTCTAGTACCAAACA
AACC-ATTTTTTTCAAATAATTCATGTACTCCCATCATTTGGATAT--A--TGTCTTTTAGGGATGGGTA---CGTCTTC
AACATGCAACTTTATGAATATGTTGGTCAAATTTTACAGATTGCAATATAATA------AAG-AAATTGCAACAAATCTG
ATGATATTATTTTTATCTAACCAACAATAATATTTCCCATGCATAGTCAAGAGTTAAAC
>chrUn_3
--TTTTTTCAAAGTGTGTCACCATGTTTCGTTGTGTACCAACAAATAAGGGTACACTCCCCTAAAAAA---ACAAATAAG
GGTACACTAATTTA-GATCTGAGTTTGCTGCACAATGAAACATTATGGT--ACAAAT-TAAAATGGGAGGAAAACCTAAC
ATACCACGCTGAAACAAGAC-AATCTGTCAAAACCAGAAAACATA--ACACGAATTTCAAAGCAATGGTGGATGGTGGAT
CTATA--CAGGACATCCCGTGCAGGCTAGAATATCATGTCTCGTGTCTAGATTATTGTCGACTTTGTGAACCCATCAAAC
ATACATGCATGCATATAGGATTCCTTCGAAATTAGTTAACGTGTTAAGCA------------------------------
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-----------TCCCAATGATGCTACGCACTTAATATCCTACAATTGTAGTAG------------TAGTAGCAGCAGCAC
TAGTGGTGGCAAATAATGTTTGCAAATTACGGCAAGACTC-AAACTCGATTGATCATGACATGAACGA--------TGCA
CTTGCA-CTCGCACTTGCGTG-----------CTACACCCCGGCCTGTATGGCTATAAATACCACCCCAAGCAACCCAGG
AAAAGCATCCCAAGCTAGCAAAGCCCACCTAGCGCTCAGCCACAAGCCAGTA--------CACTCTAGCTAGCTACTAGC
GTTATCCACATAGCAATGGCGCTCTCCAAGCTCGCCCTCTTCATCGCCATGAACCTGGCCCTCCTCGTGGCCGTGCATGG
CTGCGGGTCG---TGCGGCAACACACCGCCCGTCCCAGTCCCAAGCCCACCGATCGCCGTGCCCCCACCAGCT---CCCG
TGCCGTCTCCGCCTTCACCCGGCGGTG-CGGGCGGCACCTGCTCAATCGACACGCTCAAGCTGAAGGTATGCGCCAATGT
GCTGAACCTGCTGAAGCTCAACCTCGGCGTGCCGACGAACGAGCAGTGCTGCCCGCTTTTGAGCAGCCTCGCCGACCTAG
ACGCTGCCGTGTGCCTCTGCACCGCCATCAAGGCCAACGTCCTCGGCATCAAGCTAAACGTGCCGGTCGACCTCGTGCTC
CTCCTCAACCAGTGCGGCAAGACCTGCCCCGCCGACTTCACCTGCCCCAGCTGATCCATATATATCACAAACCATGCATG
TTAGACCTGCATCG-----TCGTCATCGTCG---TAGTCATAATTATCATATTTTCTGGTATACGCATGCACACCTATAT
ATTTTCTGCTTTTCCAGTTCAT---GTGTATGTCAGTCGCGTGGATG-ATGGGCTCCCTCGCTCGTGCATGCATGCTT--
------AAGTTACTCATCTCCCGTTATGGTATCTAAATGCATGA-------------TTC--------------------
-------------------------AAGTATTTGTAAAAGAATATATGTACGTGGAATAAAAAGTTTGTTCAGGTTGTG-
-TTTTTATTT--TTTTGCATGGGTGTTCAGGTTGTGTTAACTCGATCCGTGATGTGCCAGCTTGTATATATTGTACGCAC
--GTACGCACACATGATTGTATTCTATGAAGCGTGATCAGATCCACAGCTCTTCACATGCATTGGCGGCTACATCATGTT
TCTC--ATCGTGGCCT----CTCTTCTTTCCATTTGTCAGTTACAAAAGCACGGTA-----ACGTTTTTAAGTTTGCCAC
GTGTTGGCGGCTA-ATCTTGTTTCTCATCGCG------------------------------------------------
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----------GCAGCTACATATAGAATGCATGCTTGCCGCATCTTTTTTTAAGCTTACATCACACTATGAAGAACCATGG
ATCCGTCGACGGAAGGATGGTGTGAACTGTAAACATTTCAATGTTAACGCTAGTAAATTTTATTTGAACTGGACATCCAT
GATATTGCAACACGTTGACCTAAATGTGTATCATTGTGGCACTTTGAATCAGATTTTAGCTTCATAATTCACAATGAACA
AGATTTAATGCCTGACTTGATCGGTTTTGACAATAAGGTCTCATACAACAGGTCAAGCTAAAACCTGGTTCAGAGTGTCC
CAAAAAAATGGCTCTGAGAATATCACACTCCCTGGTTTAAATCAAGATGTATTCTATTTACACACATGAATGTACAACTG
CAATGAAGGTATTTCACAACGTATTGTTAGCTAAATCAAGGAAGCAAGAAGCACTTAACTGCTTGTGGTACCCATATATC
TGAAATTATCAACAGCTACGAATCGCATGATATCTAAATATATTGATACATAAGAATGTATTCATACCTACTCCCTCCGT
TCCGAATTACTTGTCGCATGTATGGATGTATCTAAATGTATTTTAGTTCTAGATACATCCATTTCAGAGATGAGTAATTC
GCAACAGAGGGAGTATTTATCTTGAACATCATATGTTTATATTAGTATGGATAATAATGTGTGGCTCTCTTTGGATGGGT
ATGACTCGGGACAGTTTGA-AAATA--TGAAACGATAAAATTATACAGAACAATATCCTACA--GTCCTTTTGGATGAAT
GAATTATTATCCTTGTAAAAAATTTCAAGGATGTTCTCTATCATTTAAATTCCTGCGAAATTCAGGTCAAGTACCAAACC
AACA-TTTTTTTGCCAAA---TAATGTACTAGCATCATTTGGACATACA--TGTCTTTTAGGAATGGGTA---TGTCTTC
AACATGCAACTTTACGAATATGTTGGTCTAATTTTACATATTGCAATATAACA------AAG-AAATTACAATAAATCTA
ATGATATTATTTTCATCTAACCAACAATAATATTTCCCATGCATAGCCT-GAGTTAAAC
>chr4B_6
-----TTTCAAAGTGTATGACG-TGTTTCGTTGTGTACCAACAAATAAGGGTACACTTATTTTATATGTGCAAAAAAAAG
TGTACACTTATTTTAGATC-GAGTTTGCTGCACAATGAAACATTATGAT--ACACTTTTAAAATGAGAGGAAACCCTAAC
GTGACAAGCTGAAACAAGAC-AAATTGTCAAAACCAGAAAACATA--ACACGAACTTCAAAGCAACGGTGGACGGTGGAT
CCATATACAGGATATCCCGTGCACTGGTGGA-------------------------------------------------
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-------------------------------------------------------------------------------G
TGGTGCTGGCAAATAATGTTTGCAAATTACGGCAAGAGTC-AAACTCGATTGATCATGACATGAACGA--------TGCA
CTTGCAACTTGCACTTGCCTG-----------CTACACCCCGGCCTA----GCTATAAATACCACCCCAAGCGACCCCGG
AAAAGCATCCCAAGCTAGCAAATCCCACCTAGCGCTCAGCCACAAGCA--TA--------CACTCTAGCTAGCTACTAGC
GTTATCCACATAGCAATGGCGCCCTCCAAGCTCGCCATCCTCCTGGCCATGAACCTGGCCATCCTCGTGGCCGTGCATGG
CTGTGGGTCG---TGCGGTAACACACCGACCGTCCCGGTCCCAAGCCCGCCGATCGCCGTGCCCCCGCCAGCT---CCCG
TGCCCTCTCCGCCTTCGACCGGCGGCGGGGGGCGGCACCTGCTCCATCGACACGCTGAAGCTGAAGGTATGCGACAACGT
GTTGAACCTGCTGAAGCTCAACCTCGGCGTGCCGACAAACGAGCAGTGTTGCCTGCTTCTGAGCGGCCTCGCTGACCTAG
ACGCCGCCGTGTGCCTCTGCAGCGCCATCAAGGCCAACGTCCTCGGCATCAAGCTTAACGTGTCCGTCGACCTCGTGCTC
CTCCTCAACCAGTGTGGCAAGACCTGCCCCGCCGACTTCAGCTGCCCTAGCTGATCCATCC--ATCACAAACCATGCATT
TTATACATGCATCGCGTCATCGTCATTGTCG---TACTCGTAATTCAAATATTTTCTCGTATACGCATGCACCTATATAT
--TTTGTCGTAATTATAATATG---GTATATGTCAGCCG------------------------CGTGCATGCATGCTT--
------GAGTTAGTCATTTCCCGTTATGGTAGCTAAATGCATCA-------------TTC--------------------
-------------------------AAGTATTTGTAAAAGGGTATATGTACCTGGAATAAAAAGTTTGTTCAGGTTGTG-
-TTTTTATTT--TTT-GTGTGGGTGTTCAGATTGTGTTAACTCGGTCCGTGATGTGCCAACTTGTATATATT--------
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>chr4B_6
-----TTTCAAAGAGTATGACG-TGTTTCGTTGTGTACCAACAAATAAGGGTACACTTATTTTATATGTGCAAAAAAAAA
TGTACACTTATTTTAGATC-GAGTTTGCTGCACAATGAAACATTATGAT--ACACTTTTAAAATGAGAGGAAACCCTAAC
GTGACAAGCTGAAACAAGAC-AAATTGTCAAAACCAGAAAACATA--ACACGAACTTCAAAGCAACGGTGGACGGTGGAT
CCATATACAGGATATCCCGTGCACTGGTGGA-------------------------------------------------
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-------------------------------------------------------------------------------G
TGGTGCTGGCAAATAATGTTTGCAAATTACGGCAAGAGTCAAAACTCGATTGATCATGACATGAACGA--------TGCA
CTTGCAACTTGCACTTGCCTG-----------CTACACCCCGGCCTA----GCTAT-AATACCACCCCAAGCGACCCCGG
AAAAGCATCCCAAGCTAGCAAAGCCCACCTAGCGCTCAGCCACAAGCA--TA--------CACTCTAGCTAGCTACTAGC
GTTATCCACATAGCAATGGCGCCCTCCAAGCTCGCCATCCTCCTGGCCATGAACCTGGCCATCCTCGTGGCCGTGCATGG
CTGCGGGTCG---TGCGGTAACACACCGACCGTCCCGGTCCCAAGCCCGCCGATCGCCGTGCCCCTGCCAGCT---CCCG
TGCCGTCTCCGCCTTCGACCGGCGGCGG-GGGCGGCACCTGCTCCATCGACACGCTGAAGCTGAAGGTACGCGCCAACGT
GTTGAACCTGCTGAAGCTCAACCTCGGCGTGCCGACAAACGAGTAGTGTTGCCCGCTTCTGAGCGGCCTCGCTGACCTAG
ACGCCGCCGTCTGCCTTTGCAGCGCCATCAAGGCCAACGTCCTCGGCATCAAGCTCAACGTGCCCGCCGTGACCTTGTG-
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>chr4B_701
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-------------CCAATAATGGTACGCACGTAATATCGTACAATTATAGCAGTAGTAGTACTAATAGTAGCAGCAGCGC
TAGTGGTGGAAAATAATGTTTTCAAATTACGGCAAGAGTC-AAACTCAACTGATCATGACATGAACGA--------TGCA
CTTGCA-C------------G-----------TTACACCCCGGCCTA----GTTATAAATACCACCCCAAGCAACCCAGG
AAAAGCATCCCAAGCTAGCAAAGCCCACCTAGCGCTCAGCCACAAGCCAGTA--------CACTCTAGCTAGCTACTAGT
GTTATCCACATAGCAATGGCGCCCTTCAAGCTCGCCCTCTTCCTCGCCATGAACCTGGCCATCCTCTTGGCCGTGCATGG
CTGCGGGTCA---TGCGGCAACACACCGCCCGTCCCAGTCCCAAGCCCGCCCATCGCCGTGCCCCCACCAGCT---CCCG
TGCCGTCTCCGCCTTCGTCCGGTGGCGG-GGGCGGCACCTGCTCCATCGACACGCTGAAGCTGAAGGTATGCGCCAACGT
GTTGAACCTGCTGAAGCTAAACCTCGGCGTGCCGACGGACGAGCAGTGCTGCCCCCTTCTGAGCGGCCTCGCCGACCTAG
ACGCCGCCGTGTGCCTCTGCACCGCCATCAAGGCCAATGTCCTCGGCATCAAGCTCAACGTCCCTGTCGACCTCGTTCTC
CTCCTCAACCAGTGCGGCAAGACCTGCCCTGCCGATTTCACCTGCCCTAGCTGATCCATCC--ATCACAAACCATGCATT
TCATACTTGCATCA-----TCATCATCATCGCCGTACTTGCAATTACAATGTTTTCTCGTATACGCATGCACCTATATAT
--TTCCTCGTAATTACAATATG---TTATATGTCAGTCGCGTGCATGCATGGGCTCCCTCCCTCGTGCATGCATGCTTCA
GGCATTCAGTTAGTCATTTGCCGTTACGGT-------------A-------------TTC--------------------
-------------------------CAGTATTTGTAAAAGGGTATATGTGCGTGGAATAAAAAGTTTGTTCATGTTGTC-
-TTTTTATTT--TTTTGTGCGGGTGTTCTGGTTGTGTTAACTCGATCCGTGATCTGCCAGCTTGTATATATTGTACG---
----------------------------AAGCATGATCAGATACACAGCTCTTCACATGTGTTGGCTGCTACTTCATGTT
TC-----TCGTGGCCT----CTCTTCTTTCC-TTTGTCAGTTACAAAAGCGAGGTA-----ACGTTTTTAAACTTGCCAC
GTGTTGGCGGCTACATCTTTTTTCTCATTGTG------------------------------------------------
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----------GCT-------------------------------------------------------------------
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--ACGAAGGTATTTCACAACATACTGTTA---------------------------------------------------
--------TCAACAAATAAGAATCGTATGGTATCCAAATATAATGATACATAAGAATGTATGCATTAAACATATGCATAC
C-------------------------------------------------------------------------------
-------------TATTTATGTTGAGCATCGGATGTTTATATTAGCAT-----ATAATTTGTGGCTCTCGTTGGCTGGGT
ATCACTCGAAAAAGTTTG--AAAAA--TGAAATGATGAAATTAAGTAGAACAATATCCTACAAAGCCCTTTTAGATGAAT
GAATTACTATCCTTGTAAAAAATTCCAAGGATGTTCTCTATCATTTAAATTCCTGAGAAATTCAGGTCTAGTACCAAACA
AACCAATTTTTTTCAAATAATTAATGTACTCCCATCATTTGGATAT--A--TGTCTTTTAGGGATGGGTA---CGTCTTC
AACATGCAACTTTATGAATATGTTGGTCGGATTTTACAGATTGCAATATAATA------AAG-AAATTACAACAAATCTG
ATGATATTATTTTCATCTAACCAACAATAATATTTCCCATGCATAGTCA-GAGTTAAAC
>chr4B_752
GCAC----------------------------------------------------------------------------
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------------------------------A-------------------------------------------------
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-------------------------------------------------------------------------------C
TAGTGGTGGTATATATTTTTCGCAAATTACGGCAAGAGTC-AAACTCGATATATCATGACGTG-----------------
-------CTTGCACTTGTTGCACAAATGCACACTACATCCCGGC--------CTATAAATACCACCCCAAGCAACCAAAG
AAAAGCATCACAAGCTAGCAAG-CCCACCTA--GCTCAGCCACAACCCAGTA--------CACTCTTGCTGGCTACTTGT
TTCATCAGCATAGCAATGGCGCCCTCCAAGGTCGCCCTCTTCCTCGCCCTGAACCTGGTCCTCATGGCAGCCGCGCATGG
CTGCGGGTCGTACTGCGGCAACACACCGGCCATCCCAGTGCCAACCCCGCCGATGGCCATGCCCCCGCCCGTCATCCCAG
TCCCAACCCCGCCGACGACCGGAGGCGG-CAGCGGCACCTGCTCGATCAACACGCTGAAGCTGAAGGCGTGCGCCAACGT
ACTGAACCTGCTAAAGCTCAACCTCGGCGTGCCGGCAAGCGAGGACTGCTGCCCCCTGCTGAGCGGGCTTGCCGACCTCG
ACGCCGCCGTCTGTCTCTGCACCGCCATCAACGCCAACGTCCTCGGCATCAAGCTCAACGTCCCTGTCGACCTCGTGCTC
CTCCTCAACCAGTGCGGCAAGACTTGCCCCGCCGACTTCACCTGCCCCAGCTGATCCACCC--ATCA-------------
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>chr4B_752
GCAC----------------------------------------------------------------------------
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------------------------------A-------------------------------------------------
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-------------------------------------------------------------------------------C
TAGTGGTGGTATATATTTTTCGCAAATTACGGCAAGAGTC-AAACTCGATATATCATGACGTG-----------------
-------CTTGCACTTGTTGCACAAATGCACACTACATCCCGGC--------CTATAAATACCACCCCAAGCAACCAAAG
AAAAGCATCACAAGCTAGCAAG-CCCACCTA--GCTCAGCCACAACCCAGTA--------CACTCTTGCTGGCTACTTGT
TTCATCAGCATAGCAATGGCGCCCTCCAAGGTCGCCCTCTTCCTCGCCCTGAACCTGGTCCTCATGGCAGCCGCGCATGG
CTGCGGGTCGTACTGCGGCAACACACCGGCCATCCCAGTGCCAACCCCGCCGATGGCCATGCCCCCGCCCGTCATCCCAG
TCCCAACCCCGCCGACGACCGGAGGCGG-CAGCGGCCCCTGCTCGATCAACACGCTGAAGCTGAAGGCGTGCGCCAACGT
ACTGAACCTGCTAAAGCTCAACCTCGGCGTGCCGGCAAGCGAGGACTGCTGCCCCCTGCTGAGCGGGCTTGCCGACCTCG
AAGCCGCCGTCTGTCTCTGCACCGCCATCAACGCCAACGTCCTCGGCATCAAGCTCAACGTCCCTGTCGACCTCGTGCTC
CTCCTCAACCAGTGCGGCAAGACTTGCCCCGCCGACTTCACCTGCCCCAGCTGATCCACCC--ATCA-------------
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>chr4B_752
GCAC----------------------------------------------------------------------------
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------------------------------A-------------------------------------------------
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-------------------------------------------------------------------------------C
TAGTGGTGGTATATATTTTTCGCAAATTACGGCAAGAGTC-AAACTCGATATATCATGACGTG-----------------
-------CTTGCACTTGTTGCACAAATGCACACTACATCCCGGC--------CTATAAATACCACCCCAAGCAACCAAAG
AAAAGCATCACAAGCTAGCAAG-CCCACCTA--GCTCAGCCACAACCCAGTA--------CACTCTTGCTGGCTACTTGT
TTCATCAGCATAGCAATGGCGCCCTCCAAGGTCGCCCTCTTCCTCGCCCTGAACCTGGTCCTCATGGCAGCCGCGCATGG
CTGCGGGTCGTACTGCGGCAACACACCGGCCATCCCAGTGCCAACCCCGCCGATGGCCATGCCCCCGCCCGTCATCCCAG
TCCCAACCCCGCCGACGACCGGAGGCGG-CAGCGGCCCCTGCTCGATCAACACGCTGAAGCTGAAGGCGTGCGCCAACAT
ACTGAACCTGCTAAAGCTCAACCTCGGCGTGCCGGCAAGCGAGGACTGCTGCCCCCTGCTGAGCGGGCTTGCCGACCTCG
AAGCCGCCGTCTGTCTCTGCACCGCCATCAACGCCAACGTCCTCGGCATCAAGCTCAACGTCCCTGTCGACCTCGTGCTC
CTCCTCAACCAGTGCGGCAAGACTTGCCCCGCCGACTTCACCTGCCCCAGCTGATCCACCC--ATCA-------------
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>chr4B_752
GCAC----------------------------------------------------------------------------
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------------------------------A-------------------------------------------------
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-------------------------------------------------------------------------------C
TAGTGGTCGTATATATTTTTCGCAAATTACGGCAAGAGTC-AAACTCGATATATCATGACGTG-----------------
-------TTTGCACTTGTTGCAC-AATGCACACTACATCCCGGC--------GTATAAATACCACCCCAAGCAACCAAAG
AAAAGCATCACAAGCTAGCAAG-CCCACCTA--GCTCAGCCACAACCTAGTA--------CACTCTTGTTAGCAACTTGT
TTCATCAGCATAGCAATGGCGCCCTCCAAGGTCGCCCACTTCCTCGCCCTGAACCTGGTCATCGTGGTAGCCGCGCATGG
CTGCGGGTCGTACTGCGGCAACACACCGGCCATCCCAGGGCCAACCCTGCCGATGGCCATGCCCCCGCCCGTCGTCCCAG
TCCCAACCCCGCCGATGACCGGAGGCGG-CAGCGGCACCTGCTCGATCAACACGCTGAAGCTGAAGGCGTGCGCCAACGT
ACTGAACCTGCTAAAGCTCAACCTCGACGTGCCGTCGAGCGAGGACTGCTGCCCCCTGCTGAGCAGGCTTGCCGACCTCG
ACGCCGCTGTCTGTCTCTGCACCGCCATCAACGCCAACGTCCTCGGCATCAAGCTCAACGTCCCTGTCGATCTCGTGCTC
CTCCTCAACCAGTGCGGCAAGACTTGCCCCGCCGACTTCACCTGCCCCAGCTGATCCACCC--ATCA-------------
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>chrUn_986
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GTCATCCACATAGCAATGGTGCCCTCCAAGCTCGCCCTCCTCATCGCCATGAACCTGGTCCTCTTCGTGGCCGTGCATGG
CTGCGGGTCG---TGCGGCAACACACCGCCTGTCCCGGTCCCAAGCCCGCCGATCGCCGTGCCCCCGGCAGCT---TCCG
TGCCGTCTCCGCCTTCGACCGGCGGCGG-GGGCGGCACCTGCTCAATCGACACGCTGAAGCTGAAGGTATGCACCAACGT
GCTAAACCTGCTGAAGCTCAACCTCGGCGTGCCGACGAATGAGCAGTGCTGCCCGTTTCTGAGCGGCCTCGCCGACCTAG
ACGCCGATGTGTGCCTCTGCACCGCCGTCCAGGCCAACGTCCTTGGCATCAAGCTCAACGTGCCCGTCGACCTCGTGCTC
CTCCTTAACCAGTGCGGCAAGACCTGCCCCGCCTACTTCACCTGCCCTAGCTGATCCATCC--ACCACAAACCATCCATG
TTAGACCTGCATCG-----TCGTCATCATCG---TACTCGTAATTATCATATTTTCTGGTATACGCAAGCGCCTACATAT
--TTTCTGCTTTTCCAGTTCAT---GTATATGTCAGTCGCGTGCATGAATGGGCTCCCTCGCTCGTGCATGCATGCTT--
------AAGTTAGTCATTTCCCGTTATGAT-------------A-------------TCTTTTTTTTCGCGGGTGCCTTT
TATGGTATCTAAATGCATGATTCGAAAATATTTGTAAAACGATATATGTACGTGGAATAAAACAAA--TTCAGGTTGTG-
-TGTT--TTT--ATTTCCATGGGTGTTCAGGTTGTGTTAACTCGATCCGTGATGTGCCAGCTTGTATATATTGTACGTAG
ATGTACGCACACATGAGTG-----TATGAACCATGATCAGATCCACTGCTCTTCACATGCGTTGGCGGCTACATCATGTT
TCCCATATCCTGGCCT----CTCTTCTTTCCTCTTGTCAGTTACAAAAGCGCGGTA-----ACGTTTCTAAGCTTGCCAC
GTGTTGGCGGCTACATTTTGTTTCTCATCACGGGTACATATAGAATGCATGCTTGACGCGTCCTTTTTTAAGCTTACACC
AGACTATGAAGAACCATGGATCCGTTGATGGGAAGGACGGTGTGTGTGTGTACGGGGGTTTTACGGAGTGCCTCCAACAT
GGCAGATTCTTATTGGGTTAAGGAGGGAGGTTGGGCCCCACACACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGTCCCGTAACAGCCTGTAAAACGCCCGTGTGTTTAGCATTTTAGTGTGCGCATG
TGGATAACGTAATGAACGAATAAATAAAGTGAACTGTAAACATTTCAATGTCAACGGTACTAAATTTTATTTGAACCGGA
CATCCATGATATTGCCACACTTTTCACCTAAATGTGTATCATTGTGGCACTTTGGATCAGATTTTAGCTTCATAATTCAC
AATGAACAAGATTCAATGCCAGACTCGACCAGTTGACAATAGGGTCACATGCAACCGGTCAAGCTAAAACCTGGTTCAGA
ATGACCAGAAAATAAAATTTGGCTCCGAGAATATCACATTATCTGGTTTAAATCACGATCTATTCTATATACACACATAA
ATGTACAACTGCA-------------------------------------------------------------------
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--ATGAAGATATTTCACAATGTACTGTTAGCTAAATCAACGAAGGACAAAGCACTTAACTGCTTGGGGTACCCATATATA
TGAAATTATCA-CAGCTACAAATCATATGATATCCAAATATATTGATACATAAGAATGTATGCATTAAACATATGCATAC
C-------------------------------------------------------------------------------
-------------TATTTATCTTGAGCATCATATGTTTATATTAGCAT-----ATAATTTGTGGCTCTCCTTGTATGGGT
ATGACTCGAGAAAGTTTG--CAATA--GAAAATGATGAAATTATATAGAACAATATACTACATAGTCCTTTTGGATGAAT
GAATTATTAGCCTTGTAAAATATTCCAAGGAAGTTCTCTATCATTTAAATTCCTGCGAAATTCAGGTCAAGTACCAAC--
--CA-TTTTTTTGCCAAA---TAATGTACTCCCATCATTTGGATACACA--TGTCTTTTAGGAATGGGTA---CGTCTTC
AACATGCAACTTTTTGAATATCTTTGTCAAATTTTACATATGGCA-------A------AAA-AAATCACAACAAATCTA
ATGATATTATTTTCATCTAACCAACAATAATATTTCCAATTCATAGTTT-TAGTTAAAC
>chr4B_1772
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---------------------------------------------------------------------ATTGTACG---
----------------------------AAGCATGATCAGATCCACAGCTCTTCACATGCGTTGGTGGCTACT-------
-------TCGTGGCCT----CTCTTCTTTCC-TTTGCCAGTTACAAAAGCGTGGTA-----ACGTTTTTAAGCTTGCCAC
GTGTTGGCGGCTACATCTTGTTTCTCATTGTG------------------------------------------------
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----------GCT-------------------------------------------------------------------
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--ACGGAGGTACTTCACAATGTACTGCTAGCTAAATCAAGGAAGGAAAAAGCACTTAACTGCCTGGGGTACCCATCTATC
TGAAATTATCAACAAATATGAACCGTATGATATCCAAATATATTGATACATAAGAATGTATGCAT------------TAC
C-------------------------------------------------------------------------------
-------------TATTTATGCTGAGCAGCAAATGTTTATATTAGCAT-----ACAATTTGTGGCTCTCTTTGTCTGGGT
ATGACTCAAGAAAGTTTGAAAAAAA--TGAAATGATGAAATTATGTAGAACAATATCCTACATAGCCCTTTTAGATGAAT
GAATTACTATCCTTGTAAAAAATTCCAAGGATGTTCTATATCATTTAAATTCCTTAGAAATGCAGGTCTAGTACCAAACA
AACCATTTTTTTTCAAATAATTAATGTACTCCCATCATTTGGATAT--A--TGTCTTTTAGGAATGGGTA---CGTCTTC
AACATGCAACTTTACGAATATGTTGGTCAAATTTTATAGATTGCA-------ATATAATAAA-GAATTACAACAAATCTG
ATGATATTATCTTCATCTAACCAACAATAATATTTCCCGTGCATAGTCA-GAGCTAAAC
>chr4B_1772
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---------------------------------------------------------------------ATTGTACG---
----------------------------AAGCATGATCAGATCCACGGCTCTTCACATGCGTTGGCGGCTACT-------
-------TCGTGGCCT----CTCTTCTTTCC-TTTGCCAGTTACAAAAGCGCGGTA-----ACGTTTTTAAGCTTGCCAC
GTGTTGGCGGCTACATCTTGTTTCTCATTGTG------------------------------------------------
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----------GCT-------------------------------------------------------------------
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--ACGGAGATACTTCACAATGTACTACTAGCTAAATCAAGGAAGGAAAAAGCACTTAACTGCTTGGGGTACCCATCTATC
TAAAATTATCAACAAATACGAACCGTATGATATCCAAATATATTGATACATAAGAATGTATGCAT------------TAC
C-------------------------------------------------------------------------------
-------------TATTTATGCTGAGCAGCAAATGTTTATATTAGCAT-----ACAATTTGTGGCTCTCTTTGTCTGGGT
ATGACTCGAGAAAGTTTGAAAAGAA--TGAAATGATGAAATTATGTAGAACAATATCCTACATAGCCCTTTTAGATGAAT
GAATTACTATCCTTGTAAAGAATTCCAAGGATGTTCTATATCATTTAAATTCCTTAGAAATGCAGGTCTAGTACCAAATA
AACCATTTTT-TTCAAATAATTTATGTACTCCCATCGTTTGGATAT--A--TGTCTTTTAGGAATGGGTA---CGTCTTC
AACATGCAACTTTACGAATATGTTGGTCAAATTTTATAGATTGCA-------ATATAATAAATAAATTACAACAAATCTG
ATTATATTATCTTCATCTAACCAACAATAATATTTCTCGTGCATAGTCA-GAGCTAAAC
>SNPs
----S----------------------------------------------------S----------------------
--------------S-----------S----------------------SS-----------------------------
-----------------------S---------------------SS-----S---S-----------------------
S-------------------------------------------------------------------------------
--------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS------------S--------------------------------------------S-----------
-----------------------------------------------------------------SSSSSSSSSSS----
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----------------------------------------------------SSSSSSSS-S------------------
-----------------------------------------------------S-----------------S--------
------------------------------------S-----------------S-----S--S----------------
----------------S-S----------------------------------S--------------S-----------
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----------------------S---------------S-------------------S---------------------
--------------------------------S-----------------------------------------------
--S------------S--------------------------S-------------------S-----------------
---------S------------SSS-------------------------------------SS----------------
------------------S---S---------------------SSSSSSSSSSSSS-----------------------
--------------------------------------S-----------------------S-----------------
----------SS---------------------S----------------------------------------------
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---------S-S-SSSSSSS------------------------------------------------------------
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--------------------------------------------------S--------S--------------------
----------------------------------S------S-----S---------------S----------------
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----------------------------------------S---------------------------------------
------------S------------SS-----------------------------------------------------
-------------------------------------------------------S--S--S--S---------------
-----------S-------------------S-----------------SS-------S-----------SSS-------
---------------------------S---S----------------------------------S-------------
S----------------------------------------------------------
>forward_396
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--------------------------------------------------------GAGCTTGGGCCGAATTTGTG----
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>reverse_1852
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-----------TTTTTGTGCGGGTGTTCAGG-------------------------------------------------
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