>input_sequence_80486
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----------------------------------------ATGGAAGGTGCATATAGAACCATGAGACCTCAAAGAGGGA
ACCATGGCTTCAGATTTGAAGCAAAGTGGTTGCAGGAGGAGGGATGTGAAGAAATAGTCAGGAATGCATGGTCTAACGCG
TCTTTTCGAGGCGAAAATGATTTATCTCAGATACTAAGAAGAATCGCGGGAGATCTAAAAAATTGGGACACTAATGTGTT
AGGGGATCTAGAGAAAAGAATTAAAACAATAAAAACTGAGCTGGAACATGTAAGGAGAACATCGATTGACGAGAACACGG
TGTCTCGAGAGCATCTATGGAGGGAAAAACTGGACAGACTGGAACACCAACAGGACATATTCCAGAGACAGAGAGCTCAT
GTTAAGTGGTTGCAGGCTGGGGAT-AAAAACACAACTTTTTTTTCATGCTTATGTGTCAGAAAGGAAGAATAA-------
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>chr2A_1_TraesCS2A01G273500
CCGCCTCTAGATGCACCATCGACGACACTGCAGGCCCTGTGTCAATATAATCTAACACTAAGTACTCTTAATTATGCTCT
ATCCTGTGACATCCTATGGTTTGCTTTTGGTCCTTTTATCACATGCTTTTCAAGACACTAAATTTATGTTATTGCTTATG
TAAAGTGCACTATTCTTAGTCAGATGTTTTATGTTCAGATCCATAATGCCCTTTCTCTGTGTGTGTGTCTATATATATAT
ATATATATATATATATATATATATATATATATTTGCTGCTAAGTTTGTTAATTAAAGCAATCAACCCAAACGTTAATTGT
AATAGGAAAGAGCGTTAAAGGGTTGACTACAACCAGACACTGTCCAGCTCTCCCTCAAAAGGCGCGCCACGGGTGTGCCC
CAACACCTAGTGACAAATAATGTAATGCGGGAGATAAGGGTTTGTGATGGGTACTTGGTATGTTGACTTTTGCGTAGACT
CCCCGGCAACGGCATCAGAAATCCTTCTTCCTACCTCTTGAGCACTGTGGAGCAACGTGGGCCCCATGAGGGTGGAGGGC
GCGCCTGGGGGGAGGGTAGGCGCGCCTCTACCTCGTGCCCTCCTGGTTGCTTTCTTGAAGTAGGGTCCAAGTCCTCTGGA
TTATTTTTGTTCCGAAAATCACGTTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCTTTTTTCGTGAAACTC
TGAAATAGGCAAAAAACAACAATTCTGGGTTGGGCCTCCGGTTAATAGGTTAGTCCCAAAAATAATATAAAAGTGTATAA
TAAAGCCCAATAATGTCCAAAACAAGATATAATATAGCATGGAACAATAAAAAATTATAGATACGTTGGAGACGTATCAA
TATGTCAAGGAAAGACTTGATAGAGCCGTCGGGTCCCGGAGCTGGTGCATAAGATTTCCATCATACAAAGTGATAACAGG
AGATCCTAGACACTCAGACTATCGACCTGTGACTATACATATGGAAGGTGCATATAGAACCATGAGACCTCAAAGAGGGA
ACCATGGCTTCAGATTTGAAGCAAAGTGGTTGCAGGAGGAGGGATGTGAAGAAATAGTCAGGAATGCATGGTCTAACGCG
TCTTTTCGAGGCGAAAATGATTTATCTCAGATACTAAGAAGAATCGCGGGAGATCTAAAAAATTGGGACACTAATGTGTT
AGGGGATCTAGAGAAAAGAATTAAAACAATAAAAACTGAGCTGGAACATGTAAGGAGAACATCGATTGACGAGAACACGG
TGTCTCGAGAGCATCTATGGAGGGAAAAACTGGACAGACTGGAACACCAACAGGACATATTCCAGAGACAGAGAGCTCAT
GTTAAGTGGTTGCAGGCTGGGGAT-AAAAACACAACTTTTTTTTCATGCTTATGTGTCAGAAAGGAAGAATAAGAATACT
ATCAAGAGACTAAGGAGAGAGGATGTGACATGGGTGGAGTGTGAGGAACAATTGAAGGAGCATGTTGCTAGCTATTTTTT
TAATCTGTTTACTTCCTCGACAGGACCAAATAGGGAAGAAATCTTGCATGCAGTCTCT------CCAAAAGTGACTACTC
AAATGAATCATAGTCTATGTGCGGAATATACAAAAGAGGAAGTGAAAGAAGCTCTGTTCAATATTGGTGACCTGAAGGCG
CCAGGACCAGATGGAATGCCTACAATATTCTACAAGCAGTTCTCGCAACTGGTGGGCAATAAGTTAACAGGGGAAGTGCT
GAAGTTCCTTCGAGGTGGAGAAATGCCGGAAGGATGGAACGGTACCACAGTGGTGTTAATTCCAAAAATTTCAAACCCAG
A----------GACCTTGAAGGACCTAAGAACAATTAGCCTCTGCAATGTCATTTACAAGGTGATCTCTAAAGTAATTGC
TAATAGATTGAAAAATATTCTACCTTATATTATATCTCCGAACCAAAGTGCATTTGTTTCAGGTAGAATAATTTCAGATA
ATATCTTATTGGCCTACAAACTTAACGATTTTTTGCAGAGAAGGAGAAGGGGTAAGGTAGGATATGCTGTTGTAAAGCTC
GACATGAGTAAGGCTTACGGCCGAGTAGAATGGACATTCTTGAAGGAAATGATGTTAAAATTGGGGTTTGATAGTGAATG
GGTAAACCTGGTGATGAAGTGTGTTGCAACTGGGAGGTACCAGATCAAAGGTTAATAGAGATACAAATAGGTAATTGAAA
GTGCTAGTGACCGACTAGAGGGGGGGGGGGTGAATAGGCGATTTTTATGAAAGTCTTCAAAACATGGAAGTTTCGAAGAC
AAACGATAGAAATAAACCTATTACCATGCAGCGAAAGGTAGACTACACTAGGCAAACCATAGTCAAGTATTCAATGAAGT
GAAAGCGCAATGACTAATAGCAGCTAGGCAGTAAGGATCAGGTAGGAAG
>chr5D_880
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-------------------------------------------------------------------------------A
TATGTCAAGGAAAGACTTGACAGAGCCGTCGGGTCCCGGAGCTGGTGCATAAGATTTCCATCATACAAAGTGATAACAGG
AGATCCTAGACACTCTGACCACCGACCTGTGACTATACATATGGAAGGCGCGGATAGAACTATGAGACCTCAAAGAGGGA
ACAATGGCTTCAAATTTGAAGCAAAGTGGTTGCAGGAGGAGGGATGTGAAGAAATAGTCAGGAATGCATGGTCGGACGCG
TCTCTTAGAGGCGAAAATGATTTACCTCAAAAACTAACAAGAACCATGGGAGATCTAAAAAATTGGGACACTAATGTGTT
AGGGGATCTAGAAAAAAGAATTAAAACAATAAAAACTGAGCTGGAACATGTGAGGAGAGCACTGATTGACGGGAACACGG
TGTCTCGAGAGAAACTCTTGCGGGAAAAGATG----------AACACCAACAAGACATATTCTGGAGACAGAGAGCTCAT
GTTAAGTGGTTGCAGGCTGGGGATAAAAAACACAACTTTT-TTCCATGCCTATGCGTCGGAAAGGAAGAAGAAGAATACT
ATCAAGAGACTAAGGAGAGAGAACGGGACATGGGTGGAGTGTGAGGAACAATTGAAGGAGCATGTTGCTAGCTATTTTTT
TAATCTGTTTACTTCCTCAACAGGACCAAATAGGGAAGAAACCTTGCATGCAGTCTTT------CCAAAAGTGACTACTC
AAATGAATCATAGTCTATGTGCGGAATATACAAAAGAGGAAGTGAAATAAGTTTTGTTCAATATTGGTGACCTGAAGGCG
CCATGACCAGACGGAATGCCTGCAATATTCTACAAGCAGTTCTGGCAACTGGTGGGCAATAAGTTAACGGAGGAAGTGCT
GAAGTTCCTTCAAGGTGGAGAAATGCCGGAAGGATGGAACTATGCCACAGTGGTGTTAATTCCAAAAAAATTAAACCCAG
A----------GAC----------CTAAGGCTAATTAGCCTCTGCAATGTCATTTACAAGGTGATCTCTAAAGTAATTGC
TAATAGATTGAAACATATTATACCTTATATTATATTTCCGAACCAAAGTGCATTTGTTCCAGGTAGAATAATTTCGGATA
ATATCTTATTGGC-TACGAACTTACCCATTTTTTGCAAAGAAGGAGAAGGGGTAACGTAGGATATGCTGCTGTAAAACTC
GACATGAGTAAGGCTTACGACCGAGTAGAATGGACATTCTTGAAGAAAATGATGTTAAAATTGGGGTTTGACAGTGAATG
GGTAAATCTGGTGATGAAGTGTGTTGCAACTATGAGGTACCAGATCA-AGGTTAATACAGATACAACAGAGGTAATT---
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>chr6A_880
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-------------------------------------------------------------------------------A
TATGTCAAGGAAAAACTTTATAGAGTCGTCGGGTCCCGGAGCTGGTGCATAAGATTTTCATCATACAAAGTGATAACATG
AGATCCTAGACACTCTGACCACCGACCTATGACTATACATATGAAAGGCGCAGATAGAACTATGAGACCTCAAAGAGGGA
ACAATGGCTTCAGATTTGAAGCAAAGTGGTTGCAGGAGGAGGGATGTGAAGAGATAGTCAGGAATGCATGGTCCGACGCG
TCTTTTCGAGGCGAAAATGATTTATCTCGGGAACTAAGAAGAATCGCGGGAGATCTAAAAAATTGGGACACTAATGTGTT
AGGGGGTCTAGAGAAAAGAATTAAAACAATAAAAACTGAGCTAGAACATGTGAGGAGAGCACCGATTGACGAGAACACGG
TGTCTCGAGAGCATCTCTTGAGGGAAAAGCTGGATAGACTGGACCACCAACAGGACATATTCTGGAGATAGAGAGCTCAT
GTTAAGTGGTTGCAGGCTGGGGAT-----------------TTTCATATCTATGCGTCAGAAAGGAAGAAGAAGAATACT
ATCAAGAGACTAAGGAGAGAGGACGGGACATGGGTGGAGTGTGAGGAACAATTGAAGGATCATGTTGCTAG---------
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>chr7A_880
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-------------------------------------------------------------------------------A
TATGTAAAGGAAAGGCTTGATAGAGCAGTGGGATCCCGAAGTTGGTGTGAAAGGTTTCCTCACCATAAGGTCTTTAACGG
AGATCCAAGACATTCAGACCATCGACCTGTAACCATAATTATGGAAGGGGCAGTTGGAATAATGAGACAACACAAAGGAA
ATAATGGGTTCAGGTTCGAAGCTAAATGGCTCCAGGAAGAAAGTTGTGAGGAAGTGGTTAAAAACGCCTGGTCCACTGCG
ATAGTATGCGGTGAATGCAAACTATCCCAAAGGTTGAGAAGAATAACAGAGGATCTTCAAGACTGGGATGCGAATGTTCT
AGGGGATCTAGAGAAAAGAATTAAAACAATGAAAGTGGAGTTGGAGCAAGTCAGAAGAGCACCTATCGAACAAAGCAATA
TATCCCGAGAACACTTCCTCAGAGAAAAGCTAGAGAGGCTAGAACATCAAAAGGATATGTTCTGGAGACAAAGAGCTCAT
GTCAAATGGCTTCAATCAGGTGAC-AAAAACACAACCTTT-TTCCATGCATTTGCATCAGAGAGGAGGAGAAGGAATACA
ATTAGTAAATTAAAAAGAGAAGATGGGGAGTGGATAGAAGGAGATGAACATCTAAGCGAGCATGTTGCAAATTATTTTTT
CAACCTCTTTACATCTACAATGGGGTTCAGCAGGGAAAGGGAGCACGTGCTAAGGACCATTAGGCCAAAAGTGTCCAATC
AAATGAATGCTGAATTGTGTGCTGAATATACCGAGGAGGAAGTGAGGTCAGCAATGTTCAGTATTGGGGATCTTAAGGCA
CCCGGGCCAGATGGAATGCCAGCAATCTTTTATAGAAGTTTTTGGCAAATTGTGGGAGATCAGGTTACTAAAGAAGTGCT
ACATACGTTAAGGGGCGAAGATATGCCTGAAGGGTGGAATGATACCATGATAGTATTAATTCCAAAGACAGCCCATCCAA
C----------AAGCATGAAGGATTTGCGCCCCATAAGCCTCTGCAATGTGGTGTACAAGGTGATTTCTAAAGTAATCAC
AAATAGACTGAAAACCATACTCCCTGATATTATTTCCCCCAATCAAAGCGCCTTCGTACCTGGTCATATTATTTCTGATA
ATATCCTATTAGCATATGAATTAACACACTTTTTACAGAGGAGAAGGAGAGGAAGGGTAGGATACGCAACTGTGAAGCTT
GACATGAGCAAAGCCTATGACCGTGTCGAATGGAAGTTTCTAGAGGATATTATGATGAAGCTAGGATTTCGCCATGACTG
GGTCAATCTGGTAATGAAGTG-----------------------------------------------------------
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>chr3B_1092
A-------------------------------------------------------------------------------
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---------------------------------------------------AAGTAGTCAGGAATGCATGGTCGGACGCG
TCTCTTAGAGGCGAAAATGATTTATCCCAAAAACTAAGAAGAATCGCGGGAGATCTAAAAAATTGGGACACTAATGTGTT
AGGGGATCTAGAGAAAAGAATTAAAACAATAAAAACTGAGCTGGAACATGTGAGAAGAGCACCGATTGACGAGAACACGG
TGTCTCGAGAGCATCTCTTGCGGGAAAAACTGAACAGACTGGAACACCAACAGGACATATTCTGGAGACAGAGAGCTCAT
GTTAAGTGGTTGCAGGCTGGGGAT-AAAAACACAACTTTT-TTCCATGCCTATGCGTCAGAAAGAAAGAAGAAGAATACT
ATCAAGAGACTAAGGAGAGAGGACGGGACATGGGTGGAGTGTGAGGAACAATTGAAGGAGCATGTTGCTAGCTATTTTTT
TAATCTGTTTACTTCCTCAACAGGACCAAATAGGGATGAAAGCTTGCACGCAGTCTCT------CCAAAAGTGACTGCTC
AAATGAATCATAGTCTATGTGCGAAATATACAAAAGAGGAAGTGAAAGAAGCTTTGTTCAATATTGGTGACCTAAAGGCG
CCAGGACCAGATGGAATGCCTGCAATATTCTACAAGCAGTTCTGGCAACTGGTGGGCAATAAGTTAACGGAGGAAGTGCT
AAAGTTCCTTCAAGGTGGAGAAATGCCAGAAGGATGGAACGATACCACAGTGGTGTTAATTCCAAAAATTTCAAACCCAG
AGACATTGAAGGAC----------CTAAGGCCAATTAGCCTCTGCAATGTCATTTACAAGGTGATCTCTAAAGTAATTGC
TAATAGATTGAAACATATTCTACCTTAAATTATATCTCCGAACCAAAGTGCATTTGTTCCAGGTAGAATAATTTCGGATA
ATATCTTATTGGCCTATGAACTTACCCATTTTTTGCAGAGAAGGAGAAGGGGTAAGGTAGGATATGCTGCTGTAAAGCTC
GACATGAGTAAGGCTTACGACCGAGTAGAATGGACATTCTTGAAGAAAATGATGTTAAAATTGGGGTTTGACAGTGAATG
GGTAAATCTGGTGATGAAGTGTGTTTCAACTATGAGGTACCAGATCA-AGGTTAATAGAGATACAACGGAGGTAATT---
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>chr7D_1468
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----------------------------CATGGGTGGAGTGTGAGGAACAATTGAAGGAGCATGTTGCTAGCTATTTTTT
TAATCTGTTTACTTTCTCAACAGGACCAAATAGGGATGAAAGCTTGCACGCGGTCTCT------CCAAAAGTGACT-CTC
AAATGAATCATAGTCTATGTGCAGAATATACAAAAGAGGAAGTGAAAGAAGCTTTGTTCAATATTGGTGACCTAAAGGCG
CCAGGACCAGATGGAATGCCTGCAATATTCTACAAGCAGTTCTGGCAACTGGTGGGCAATAAGTTAACGGAGGAAGTGCT
AAAGTTCCTTCAAGGTGGAGAAATGCCGGAAGGATGGAACGATACCACAGTGGTGTTAATTCCAAAAATTTCAAACCCAG
AGAACTTGAAGGAC----------CTAAGGCCAATTAGCCTCTGCAATGTCATTTACAAGGTGATCTCTAAAGTAATTGC
TAATAGATTGAAGCATATTCTACCTTATATTATATCTCCGAACCAAAGTGCATTTGTTCCAGGTAGAATAATTTTGGATA
ATATCTTATTGGCCTACGAACTTACCCATTTTTTGCAGAGAAGGAGAAGGGGTAAGGTAGGATATGCTACTGTAAAGCTC
GACATGAGTAAGGCTTACGACCGAGTAGAATGGACATTCTTGAAGAAAATGATGTTAAAATTGGGGTTTGACAGTGAATG
GGTAAATCTGGTGATGAAGTGTGTTGCAACTGTGAGGTACCAGATCA-AGGTTAATAGAGATACAACAGATGTAATT---
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
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-------------------S----------------------------S---S-------S-------------------
--S----------------------------------------------------------------------S------
-------------------------------S------------------------------------------------
---------------------------------------------------S------S--S------------------
----------------S-S-------------------------------------------SS----------------
----------------------------------------S--------S----S---------------S---------
-------------------------S------------------------------------------------------
------------------S----------------------S--------------------------------------
-----------------------------------------------------S--------------------------
---------------------S---------------------S------------------------S-S---------
-----------------------------------------S--------------------------------------
---------------S-------S-----SS-------------------------------------------------
----------------------------------------------------------S----------------S----
-----------------S------S-S------------------------------------------S----------
-------------------S---------------------------------------------------S--------
------S-------------------------S--------------S------------------SSSS-SS-S-SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_534
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----------------------------------CTCTTGAGCACTGTGGAGCA--------------------------
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>reverse_1724
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-------------------------------------------CGCAACTGGTGGGCAATAAG-----------------
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