>input_sequence_80461
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---------------------------------------------------------------------------ATGAG
AGAGATGGAGGCACTGGAGAAGAAAGGGCACAGATCCTTGGCCAAA------CCAGTGAAGCCCCC------CTACAATA
CCCCATCTAGGCACAAGCGTTCCAAAAGGTTGGAAACATTA----------------------------CCTTTTTCTCA
GGTTGATTGATGCTGATAAA----TGCGTATAAAAATGTATTTATGATTTGAGTAATGGCAGCGATTTAGAGGAGAAAAA
TGC-AAGGATGCATAGCCTTCTTCGCAGAAAGTGTCT---AATCACCCAAAGCCAGTAAGTTTCCCCTTTTGTTACCCTT
TTTCTTGTGCTTCATATA---CCACTGGTTCTCTGCAGATTTGAGATTTTTTT---GTTTTGTTTCTGTGGTGTCTTCCA
GA----------------------------------ATGGTAGGAACTCAAACTCTCGTCTGCAGAATGAAACCAACAAG
GGAATCCATCCCAAGAGTGACACGCAAGACATCCTGA-------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr7A_1_TraesCS7A01G440600
TGGTGACAAATAGTTTGAGTCTAAAGATCATTTGTGTCCCTCTTGTCTATTGCTTGTGGAACTGTAGAAACAACGATTAA
TGTGATGTATGTGAGGGGCCATTAAAGTGACTTACCTGGTGAGAAGATGTGTTTGGCATTGATTAAGAA-----------
-TCGTCTGATTGTACTGTCTTCCTTTAGGAGAAGATGTGTTCATTGCTGAAACTAGATACATGGGTGCTTCCTTCTTCCA
AGATATTGACGAAGCCTGGC------------------------------------------------------------
--------------------------------------------TAATCAATGTCACTCCAGTTGATGATGTTATGAAGC
TTCCTTCAGTAACTGGTATGACTTGACGCCGGCGTTGTTTTGTGTTCAGAGGAGATGAGCTGTTGTATTCTTCCTTTTTA
TAGTTGTTGCAGGTTTTGCTAGATCTAAATCCATAGACAAAGCACTGATTGTTTGCTCTCTTGGAGCTATTATAATTTGC
ACAACTATATTTTAAGATTCATTTTGCTTACATTCATTTAGTGAAGCCCCTGCAAAAGTCAATATTCATTTGAGTGGTGA
CGACTGCACATGAT---TTTT-TTTACATTCATTTTTAGTGAAGAGCTCCAGTATTTCAGGCTAGCTTGGTGGCTTCCAT
ATGAAATGATGAAAATTAATAATTGAAACTGAGATATGCAAAACCTACTAG------A----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GTTAGGATTGTTAACTCGTTTTAGTGAACATGCATGTGT
ATAACCTTGCTGTTGTTCAGGCAAGTGGGTGCTCCCTCTCC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CTCTCTCTCTCCCACTCCCCCC--GCTTCGTTCCTTGAACCTTCAACTCTC
TTTCTTCCACTTCTGCTTCACT--GCTTGAGCCTTCAATTAATTCCGTACACTGCACCAGCTAAATTGTACAAGTTCT--
--TATTTATTTATTTTGTATTCTTCGTTGCATTTCTCTCTCCCTGTGTCTTAGCGCAAGCTTGTTTTCTTCTTGATCACT
TGTACTTTGGTGCCTGCCATGGTTTCCTTCTT---------CTGATTTCATTCACTTCTTGGTTGGTTTCA-AGAATGAG
AGAGATGGAGGCACTGGAGAAGAAAGGGCACAGATCCTTGGCCAAA------CCAGTGAAGCCCCC------CTACAATA
CCCCATCTAGGCACAAGCGTTCCAAAAGGTTGGAAACATTA----------------------------CCTTTTTCTCA
GGTTGATTGATGCTGATAAA----TGCGTATAAAAATGTATTTATGATTTGAGTAATGGCAGCGATTTAGAGGAGAAAAA
TGC-AAGGATGCATAGCCTTCTTCGCAGAAAGTGTCT---AATCACCCAAAGCCAGTAAGTTTCCCCTTTTGTTACCCTT
TTTCTTGTGCTTCATATA---CCACTGGTTCTCTGCAGATTTGAGATTTTTTT---GTTTTGTTTCTGTGGTGTCTTCCA
GA----------------------------------ATGGTAGGAACTCAAACTCTCGTCTGCAGAATGAAACCAACAAG
GGAATCCATCCCAAGAGTGACACGCAAGACATCCTGAGAAAAGAGACAGGAA----------------------------
------------------------------------------------------------------GCAAT-------TC
--T---TTTTTTTCTGTTCTTACTAGCTCACATGCAGAAGAAATCAGAGACTGCATCTTGAAAGAATTGTTACAACATTT
TCATTTCTGGATGCACC-----------CAGTATTTTGGTCTAATGGGATGACGATGATCTGATGTAGATTGTGCAGCTG
GAGAGGCACCTTGACCATCAGCAAACGGTGCACGGCGCACTGGAGAAAGCGTTGGGTCCTAACTCTGCTC-AGTTACTCT
ATTCAATGAGAGCGCAATCCTCAAGGTGACACTTGT--TTTTAC---TAGGACATGTATAGTATAGTATATTCCATCAGA
--------------------------------------------TGAAACTGATGTTTTC---TTTGGCAGCCAACTAAC
CAACTGATAAGGGAGGTTGCCACACTGGAGCTGGAGATCAATCACCTGGAGTAGTACCTCATAACATTGTACATGAAAGC
ATTTGAGGAAGCACCTAC------------------------------------------------------A-------
-----------------------------------------------TTGAGTTCACGGTCTGCGGTGCTCGAGGAAACA
CCAAAAGTAAAGGCGACTGTCGAAAGAGGTAGTGATGCAATGCTCCATTGCAGCTG-CCTCCCCTTAGCAAGAGGAGGAA
TGGCAC----ATGGAGGATTCCTCTCCGTCCAAATGCCCAACGAAGGGTCGATGGTCATGAATCAAAGTTAACTTCCTCT
CTACTTATCATTTAACTGCGACAAAGAATTTGAGCCAGCACCAATACAACTGTCTGATGCTTTGCAAAGTAGGCATT---
--------------AAGAATATGAAAGAGAACTTGCAATTCCATTTGTCAATGTGCAGTGCCAAAGAACACATTTACATT
TTGCAGGTATGTT-TGTTTCATACTTACAAAATAAGTGACATGGTGCCCAGATATTTAACTCATAATTTGTCATTACTTT
CCACTTCGTTTATACATATGTTGGTTCGAGCAATGCATTAGAATTAATCACAAATTAATTTTCTTAAGATTTCATTTTCC
ATTGCTTGTTTGGTATTAAGATGATGACTGACATAGGCAGATAACAAGTTAACAACGA
>chr1A_1
TGGTGGCAAATAGTTTGAGTCTAAAGATCATTTGTGTCCCTTTTGTCTATTGCTTGTGGAACTGTAGAAACAACGATTAA
TGTGATGTATGTGAGGGGCCATTAAAGTGACTTACCTGGTGAGGAGATGTGTTTGGCATTGATTAAGAA-----------
-TCGTCTGATTGTATTGTCTTCCTTTAGGAGAAGATGTGTTCATTGCTGAAACTGGATACAAGGGTGCTTCCTTCTTCCA
AGATATTGACGAAGCCTGGCAGCTATAGATTTT-----------------------------------------------
-------------------CCTCAGCACAAGTGCAAGCAGATCTTAATCAATGTCACTCCAGTTGATGATGTTATGAAGC
TTCCTTCAGTAACTGGTATGACCTGACGCCGGCGTTGTTTTGTGTTCAGAGAAGATGAGCTATTGTATTCTTCCTTTTTA
TAGTTGTTGCAGGTTTTGCTAGATCTAAATCCATAGACAAAGCACTGATTGTTTGCTCTCTTGGAGCTATTATAATTTGC
ACAACTATATTTTAAGATTCATTTTGCTTACATTCATTTAGTGAAGCCCCTGCAAAAGTCAATACTCATTTGAGTGGTGA
CGACTGCACATGA----TTTT-TTTACATTCATTTTTAGTGAAGAGCTCCAGTATTTCAGGCTAGCTTGGTGGCTTCCAT
ATGAAATGATGAAAATTAATAATTGAAACCGAGATATGCAAAACCTACTAGCTTAGGA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------GTTAGGATTGTTAACTCGTTTTAGTGAACATGCATGTGT
ATAACCTTGCTGTTGTTCAGGCAAGTGGGTGCTCCCTCTCCCT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CTCTCTCTCTCCCACTCCCCCC--GCTTCGTTCCTCGAGCCTTCAACTCTC
TTTCTCCCACTTCTGCTTCACT--GCTTGAGCCTTCAATTAATTCCGTACACTGCACCAGCTAAATTGTACGAGTTCT--
--TATTTATTTATTTTGTATTCTTCGTTGCATTTCTCTCTCCCTGTGTCTTAGCGCAAGCTTGTTTTCTTCTTGATCACT
TGTACTTTGGTGCCTGCCATGGTTTCCTTCTT---------CTGATTTCATTCACTTCTTGGTTGGTTTCA-AGAATGAG
AGAGATGGAGGCACTGGAGAAGAAAGGGCACAGATCCTTGGCCAAA------CCAGTGAATCCCCC------CTACAATA
CCCCATCTAGGCACAAGCGTTCCAAAAGGTTGGAAACATTA----------------------------CCTTTTTCTCA
GGTTGATTGATGCTGATAAA----TGCGTATAAAAATGTATTTATGCTTTGAGTAATGGCAGCGATTTAGAGGAGAAAAA
TGC-AAGGATGCATAGCCTTCTTCGCAGAAAGTTTCT---AATCACCCAAAGCCAGTAAGTTTCCCCTTTTGTTACCCTT
TTTCTTGTGCTTCATATA---CCACTGGTTCTCTGCAGATTTGAGATTTTTTTTTTGTTTTGTTTCTATGGTGTCTTCCA
GA----------------------------------ATGGTAGGAACTCAAACTCTCGTCTGCAGAACGAAACCAACAAG
GGAATCCATCCCAAGAGTGACACGCAAGACATCCTAAGAAAAGAGACAGGAA----------------------------
------------------------------------------------------------------GCAAT-------TC
TTT---TTTTTTTCTGTTCTTACTAGCTCACATGCAGAAGAAATCAGAGACTGCATCTTGAAAGAATTGTTACAACATTT
TCATTTCTGGATGCACC-----------CAGCATTTTGGTCTAATGGGATGACGATGATCTGATGTAGATTGTGCAGCTG
GAGAGGCACCTTGACCGTCAGCAAACGGTGCACGGCGCACTGAAGAAAGCCTTGGGTCCTAACTCTGCTC-AGTTACTCT
ATTCAATGAGAGGGCAATCCTCAAGGTGACACTTGT--TTTTAC---TAGGACATGTATAGTATAGTATATTCCATCAGA
--------------------------------------------TGAAACTGATGTTTTC---TTTGGCAGCCAACTAAC
CAACTGATAAGGGAGGTTGCCACACTGGAGCTGGAGATCAAGCACCTGGAGTAGTACCTCATAACATTGTACATGAAAGC
ATTTGAGGAAGCACCTAC------------------------------------------------------A-------
-----------------------------------------------TTGAGTTCACGGTCTGCGGTGCTCGAGGAAACA
CCAAAGGCAAAGGCGACTGTCGAAAGAGGTAGTGATGCAATGCTCCATTGCAGCTG-CCTCCCCTTAGCAAGAGGAGGAA
TGGCAC----ATGGAGGATTCCTCTCCGTCCAAATGCCCAACGAAGGGTCGATGGTCATGAATCAAAGTTAACTTCCTCT
CTACTTATCATTTAACTGCGACAAAGAATTTGAGCCAGCACCAATACAACTGTCTGATGCTTTGCAAAGTAGGCATTAAG
AATAGAGGCCTCTTAAGAATATGAAAGAGAACTTGCAATTCCATTTGTCAATGTGCAGTGCCAAAGAACACATTTACATT
TTGCAGGTATGTTCTGTTTCATACTTACAAAATAAGTGACATGGTGCCCAGATATTCAACTCATAATTTGTCATTACTTT
CCACTTCGTTTATACATATGTTGGTTTGAGCAATGCATTAGAATTAATCACAAATTAATTTTCTTAAGATTTCATTTTCC
ATTGCTTGTTTGGTATTAAGATGATGACTGACATAGGCAGATAACAAGTTAACAATGA
>chr7D_1
TGGTGGCAAATAGTTTGAGTCTGAAGATCATTTGTGTCCCTCTTGTCTGTTGCTTGTGGAATTGTAGAAACAACGATTAA
TGTGATGTATGTGAGGGGCCATTAAAGTGACTTACCTGGTGAGAAGATATGTTTGGCATTGATTAAGAAAACAATACATT
TTCGTCTGATTGTATTGTCTTCCTTCAGGAGAAGATGTGTTCATTGCTGAAACTGGATACAAGGGTGCTTCCTTCTTCCA
GGATATCGACGAAGCCTGGCAACTATAGATTTT-----------------------------------------------
-------------------CCTTAGCACAAGTGCAGGCAGATCTTAATCAATGTTACTCCAGTTGATGATGTTATGAAGC
TTCCTTCAGTAACTGGTATGACCTGACGCCGGCGTTGTTTTGTGTTCAGAGGAGATGAGCTGTTGTATTCTTCCTTTTTA
TAGTTGTTGCAGGTTTTGCTAGATCTAAATCCATAGACAAAGCACTGATTGTTTGCTCTCTTGGAGCTATTATAATTTGC
ACAATTATATTTTAAGATTCATTTTGCTTACATTCATTTAGTGAAGCCCCTGCAAAAGTCAATATTCATTTGAGTGGTGA
CGATTGCACATGA----TTTT-TTTACATTCATTTTTAGTGAAGAGCTCCAGTATGTCAGGCTAGCTTGGTGGCTTCCAT
ATGAAATGATGAAAATTAATAATTGAAACCGAGATATGCAAAACCCACTAGCTTAGGA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GTTAAGATTGTTAACTCGTTTTAGTGAACATGCATGTGT
ATAACCTTGCTGTTGTTCAGGCAAGTGGGTGCTCCCTCTCCCT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CTCTCTCCCACTC---C---CCTTGCTTCGTTGCTCGAGCCTTCAACTCTC
TTTCTCCCACTTCTGCTTCACT--GCTTGAGCCTTCAATTAATTCCGTACACTGCACCAGCAAAATTGTACGAGTTCT--
--TATTTATTTATTTA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTTA--TTTTGT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACAGTGAGTTCACGGTCTGCGGCGATCGAGGA-----------------------------------
---------------------------------------------------------------------AACACCATA--
--------------------------------------------------------------------------------
---------------------ACATTGGAGCTGGAGATCAAGCACCTGGAGCAGTACCTCATAACATTGTACATGAAAGC
ATTTGAGGAAGCACCTAC------------------------------------------------------A-------
-----------------------------------------------GTGAGTTCACGGTCTGCGGCGATCGAGGAAACA
CCAAAGGCAAAGGCGACTGTCGAAAGAGGTAGTGATGCAATGCTCCATTACAGCTG-CCTCCCCTTAGCAAGAGGAGGAA
TGGCAC----ATGGAGGATTCCTCTCCATCCAAATGCCCAAGGAAGGGTTGATGGTCATGAATCAAAGTTAACTTCCTCT
CTACTTATCATTTAACTGTGACAAAGAATTTGAGCCAGCACTAATACAATTGTCTGATGCTTTGCAAAGTAGGCATT---
--------------AAGAATATGAAAGAGAACTTGCAATTCCATTTGTCAATGTGCAGTGTCAAGGAACACATTTACATT
TTGCAGGTATGTTCTGGTTCATACTTACAAAATAAGTGACATGGTGCCCACATATTCAACTCATAATTTGTCATTACTTT
CCACTTTGTTTATACATATGTCGGTTCGAGCAATGCATTAGAATTAATCACAAATTAATTTGCTTAAGATTTCATTTTCC
ATTGCTTGTTTGGTATTAAGATGATGACTGACATAGGCAGATAACAAGTTAACAACGA
>chr2B_7
------CAAATAGTTTGAGTCTGGAGATCATTTGTGTCCCTCTTCTCTGGTGCTTGTAGAATTGTAGAAACAACGATTAA
TGTGATGTATGTGAGGGGTCATTAAAGTGACTTACCTGGTGAGAAGATGTGTGTGGCATTGATTAAAAAAACAGTACATT
TTCGTCTGATATTACTGTCTTCCTTCAGGAGAAGATGTGTTCACTGCTGAAACTGCATACAAGGGTGCTTCCTTCTTCCA
GGATATCGACGAAGCCTGGCAACTATAGATTTTTCCTCTATGTGATTCCGAGGGCTCCATGGAGGATCAACTTCGGTTCA
GAGCCAGGTTTTGGGCATACCGCAGCACAAACAGAGGCATATCTCAGTCAATGTTACTCCAGTTGATGATGTTATGAAGC
TTCCTTCAGTAACTGGTATGACCTGACGCCGTCGTTGTTTTGTGTTCAGAGAAGATGAGCTATTGTATTCCTCCTTTTTA
TAGTTGTTGTAGGTTTTGCTGGATCTAAATCCATAGACAAAGCACTGATTGTTTGCTCTTTTGGAGCTATTATAATTTGC
ACAACTATTTTTTAAGATTCATTTTGCTTACATTCATTTAGGGAAGCCCCTGCAAAAGTCAATATTCATTTGAGTGGTAA
CGAGTGCACATGA----TTTTGTTTACATTCATTTTTAGTAAAGAGCTCCAGTATGTCAGGCTAGCTTGGTGGCTTCCAT
ATGAAATGATGAAAATTGATAATTGAAACCGAGATATGCAAAACCTACTAGCTTAGGG----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GTTAGGATTGTTAACTCGTTTTAGTTAACATGCATGTGT
ATAACCTTGCGGTTGTTCAGGCAAGTGGGTGCTACCTCTTCCT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CTCTTTCCCACTC---CTCCCA---CTTCATTGCTCGAGCCTTCAACTCTC
TTTCTCCTACTTCTGCTTCATT--GCTTGAGCCTTCAATTAATTCCGAACACTGCACCAACTAAATTGTATGAGTTCT--
--TATTTATTTATTTTGTATTCTTCGTTGCATTTCTCTCTCCTTGTGTCTTAGCGTGAGCTTGTTTTCTTCTTGATCACT
TGTACTTTGGTGCCTGCCATGGTTTTCATATT---------ATGATTTCATTCATTTCTTGGTTGGTTTCA-AGAATGAG
AGAGATGGAGGCACTGGAGAAGAAAGGACATAGATCCTTGGCCGAA------CCAGTGAAGCCCCC------CTACAATA
CCCCATCAAGACACAAGCATTCAGAGAGGTTGGAAACATTA----------------------------TCTTTTTCTCA
TGTTGATTGATGCTGATAAA----TGCGTATAAAAATGTATTTATGCTTTGAGTAATGGCAGCGATTTAGAGGAGAAAAA
TGC-AAGGATGCATAGCCTTCTTCGCAGAAAGCGTCT---AATCACCCAAAGCCGGTAAGTTTCCCATTTCATTAACCTT
TTTCTTGTGCTTCATATA---CCACTGTTTCTTTGTAGATTTGAGATTTTTTTTA--TTTTGTTTATGTGGTGTCTTCCA
GA----------------------------------ATGGTAGAAACTCAAACTCTCGTCTGCAGAACGAAACCAACAAG
GGAATCCATCCCAAGAGTGACACGCAAGACACCCTGAGAAAAGAGACAGGAA----------------------------
------------------------------------------------------------------CCA-----------
--T---TTTTTTTCTATTCTTACTAGCTCACATGCAGAAGAAATCAGAGACTGCATCTTGAAAGAATTGTTACAACATTT
TCGTTTCTGGATGCACC-----------AAGCATTTTGGTCTAATGGGATGACGATGATCTGATGTAGATTGTGCAGCTG
GAGAGGCACCTTGACCAACAGCAAACGGTGCACGGTGCACTGGAGAAAGCGTTGGGTCCTAACTCTGCTCCAGTTACTCT
ATCCAATGAGAGCCCAGTCCTCAAGCTGACACTTGT--TTTTAC---CAGGACATGTATAGTATAGTATGTTTA------
---------------------------------------------------------TTC---TTTGGTAGCCAACTAAC
CAACTGACAAGGGAGGTTGCCACACTGGAGCTGGAGATCAAGCACATGGAGCAGTACCTCATAACATTGTACATGAAAGC
ATTTGAGGAAGCACCCAC------------------------------------------------------A-------
-----------------------------------------------GTGAGCTCACAGTCTGTGCCGATCGAGGAAACG
CCCAAGGCAAAGGCGACCATCGAAAGAGGTAGTGATGCAATGCTCCATTACAGCTG-CCTCCCCATAGCAATAGGAGGAA
TGGCACC---ATGGAGGATTCCTCTCCGTCCACATGCCCAGTGAAGGGTCGATGGTCATGAATCAAAGTTAACTTCCTCT
CTACTTATCATTTAACCGCGACAAAGAATTCGAGTCGGCACTAATACAACTGTCTGATGCTTTGCAAAGTAGGCATT---
--------------GAGAATATGAAAGAGAACTTGCAATTCCATTGGTCAGTGTGCAATGCCAAGGAACACATTTACATT
TTGTAGGTATGTTCTGGTTCATACTTTCAAAATAAGTGTCATGGTGCCCACATATTCAGCTCATAA-TTGTCATTACTTT
CCACTTCGTTTATACATATGTCTGTTTGAGCAATGCATTAGAATTAATCACAAATTAATTTTCTTAAGATTTCATTTTCC
GTTGCTTGTTTGGTATTAAGATGATGACTGACATATGCAGATAACAAGTT--------
>chr5A_252
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TCAATGCTACTCCAGTTGATAATGCCCTGAAGC
TTCCTTCAGTAACTGGTATGACTTGACGCCGGTGTTGTTTTGTGTTCAGAAAAGATGAGTTGTTGTATATTT--TTTTTG
TAGTTGTTGCAAGTTCTGCCATGTCTAAGTCCATAGAAAAAGTACCGATTGCTAGCTGTCTTGGAGCTGTTATAATTTGC
ACAACTATTTTTTAAGATTCATTTTGCTTACATTCATTTAGTGAAGCTCCTGCAGAAGTCAATATTCATTTGAGTGGTGA
CCAGTGTGCATGA----TTTTATTTACATTCAATTTTAGTGAAGAGCTCCAGTATGTCAGGCTAGCTTGGTG--------
-TGAAATGATGAAAAAATGTAGCTGCAACTATGCACATGATGCAAGAGTTATATTTGTGCAGTGGTAGATGCAACTATGC
ACATCAGTTGGCTGCCCTCTGTTACTATCTTATTTTTTGTTGAATTAACCAATACCAGAACACAACTCTATCCCACATGA
ACTCAAGTGTTATGTTGCATGCCATTTTCTGTTGTAGGAGGAGCAGTACACATAGTGAGAGTTCAAGAGAATCTGCTGAA
ATTGAGGTCACAACAGAATAGGTACTTTACACTGACGTTTGTAATGTTTTTTTCTGTATGTTGTGTGCTGATGTTTGTAA
TGGTATGTGGTCCTGTACTTAGCAAGCCTCATGATGCCAATTGAAATGACATCCATGTTAATTAATGTATGTCGATTGAG
CTGGCCAGTAGCCAAAACGTGACTTCTTGATGACGAGCATTGCTGGACTCCTTCACTGATATTATTTGCCATGCTTTTAT
TTTTGCCATGCTTCATATTTTTGCCACGCTTCTACATATCTACCACACTTTTTATTTGCATTTACCTGCTGGTTTAGGCA
TTATATTTTATGATTAAACCTCTCTCGATGCTAGATGTTTGATGTTTTGCCTCTTCGAAATAAAACAAGGGATTATGTGC
TCGCATGTTTGTTAATTACCAGTAAAATTGTCAAAGTGTGATTTTTGAATTTTCATATATTGGATAAAATTTTCTGTATG
ATCTTTGTGTGCTTCTGTTCTTTCATCCGATTTGGCCATGTAGAAGTAAGATTTTATTTATGATTGCATGATGGTTCAGA
TCTTTTCTTTTGACGCTTTCACAATTCTA--CTCTCCATCTCATTCTGTCG---CTTATCTTCCTCTTGCGCTTTGTTTC
ATCTGTTCAGTAGCTTGCTTGTGATCCATGTGCTCATTAACTCCA-----------------------------TTCT--
--CATGTGTTTCTATTTTTT-CTCTGCGACAATGCTGACGAGCCACTC--TCGTGTGAGTTAGTTTTAAATTCTCAATC-
-------------------------------TGACTGCGTGATGGTTCAA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATATTTTCTT-------TTCATTTGTGCTTTCCCAAT
TCTATTCTCTAATCTGTGTGATAACTAAGACTTCATATGTTTA-AATTCCAATTACTTTGTTGAGATTGAAGAAATTCAT
AACCTTGTTGTTTTTTATGTGAGCTTATCCTCTACCCTTATAGTAGCTTACAAAATTTCAATGTACTTCACTTTAATGAT
ATAATGTACTGCCATGGGTGGTTTGGTTAAAGTACCATTTTATGTTGACAATCAATTACAGGCAACTCA-----------
--TCCTATTTGTTTCACAGTCTCAGGTTCACATTAGTTTCTCT-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GCATGGAGACTCAGCTTTGTCGGTGTCACTTT
CAGATCAAC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GGTCATGAATTAAAGTTAACTTCCTCT
CTACTTATCCTTTAACTGCAACAAAGAATTCGAGCCGGCACTAATACAACTGTCTGATGCTTTGCAAAGTAAGGATT---
--------------GAGAATATGAAAGAGAACTTGCAATTCCATTCGTCAATGTGCAGTGCCAGGGAACCCATTTACATT
TTGCAGGTATGTTCTGGTTCATACTTCTAAAAT---------------------TTCAACTTATAACTTGTCACTGCTTT
CCACTCCATTTATACAGATGTCTGTTCGAGCAATTCATTAGAATTAATCACAAAATAATTTGCTTAATATTTCATTTTCC
ATT-------------------------------------------------------
>chr3A_252
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TCAATGCTACTCCGGTTGATAATGCCCTAAAGC
TTCATTCAGTAACTGGTATGACTTGACGCCGGTGTTGTTTTGTGTTCAGAGAAGATGAGTTGTTGTATATTT--ATTTTG
CAGTTGTTGCAAGTTCTGCCATATCTAAATCCATAGAAAAAGTATTGATTGCTAGCTGTCTTGGAGCTGTTATAATTTGC
ACAACTATTTTTTAAGATTCATTTTGCTTACATTCATTTAGTGAAGCTCCTGCAGAAGTCAATATTCATTTGAGTGGTGA
CCATGCGCATGATTTTGTTTTGTTTACATTCATTTTTAGTGAAGAGCTC-----------GCTAGCTTGGTG--------
-TGAAATGATGAAAAAATGTAGCTGCAACTATGCACATGATGCAAGAGTTATATTTGTGCAGAGGTAGCTGCAACTATGC
ACATCAGTTGGCTGCCCTATGTTACTATCTTATTTTTTGTTGAATTAACCAATACC---------------CCCACATGA
ACTCAAGTGTTATGTTGCATGCCATTTTCTGTTGTAGGAGGAGCAGTACACAGAGTGAGAGTTCAAGAGAATCTGCTGAA
ATTGAGGTCACAACAGATCAGGTACTTTACACTGACGTTTGTAATGTTTTTT-CTGTATATTGTGTGCTGATGTTTGTAA
TGGTATGTGGTCCTGTACTTAGCAAGCCTCATGATGCCAATTGAAATGACATCCATGTTAATTAATGCATGTCGATTGAG
CTGGCCAGTAGCCAAAACATGACTTGTTGATGACGAGCATTGTTGGACTCCTTCACTGATATTATTTGCCATGCTTTTAT
ATTTGCCATGCTTCATATTTTTGCCACGCTTCTACATATCTACCACACTTTTTATTTGCATTTACCTGCTGGTTTAGGCA
TTATACTATATGATTAAACCTCTCTTGATGCTA-------GATGTTTTGCCTCTTCGAAATAAAACAAGGGATTATGTGC
TCGCATGTTTGTTAATTACCAGTAAAATTGTCAAAGTGTGATTTTTGAATTTTCATATATTGGATAAAATTTTCTGTA--
------------TTCTGTTCTTTCATC-GATTTGGCCATGTAGAACTAAGATTTTATTTATGATTGCATGATGGTTCAGA
TCTTTTCTTTTGACGCTTTCACAATTCTACTCTCTCCATCTCATTCTGTCG---CTTATCTTCCTCTTGCGCTTTGTTTT
ATCTGTTCAGTAGCTTGCTTGTGATCCATGTGCTCATTAACTCCA-----------------------------TTCT--
--CATGTGTTTCTATTTTTTTCTCTGCGGCAATGCTGACGAGCCACTC--TCGTGTGAGTTAGTTCTAAATTCTCAATC-
-------------------------------TGACTGCATGATGGTTCA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GATATTTTCTT-------TTCATTTGTGCTTTCCCAAT
TCTATTCTCTAATCTGTGTGATAACTAAGACTTCATATGTTTGGAATTCCAATTACTTTGTTGAGATTGAAGAAATTCAT
AACCTTGCTGTTTTTTATGTGAGCTTATCCTCTACCCTTATAGTAGCTTACAAAATTTCAATGTACTTCACTTTAATGAT
ATAATGTACTGCCATGTGTGGTTTGGTTAAAGTACTATTTTATGTTGACAATCAATTACAGGCAACTCA-----------
--TCCTATTTGTTTTACAGTCTCAGGTTCACATTAGTTTCTCT-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GCATGGAGACTCAGCTTTGTCGGTGTCACTTT
CAGGTCAAC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AGTCATGAATCAAAGTTAACTTCCTCT
CTACTTATCATTTAACTGCAACAAAGAATTCGAACCGGCACTAATACAACTGTCTGATGCTTTGCAAAGTAAGGATT---
--------------GAGAATATGAAAGAGAACTTGCAAT-CCATTCATCAATGTGCAGTGCCAGGGAACCCATTTACATT
TTGCAGGTATGTTCTGGTTCATACTTCTAAAAT---------------------TTCAACTTATAATTTGTCGTTGCTTT
CCACTCCATTTATACAGATGTCTGTTTGAGCAATTCATTAGAATTAATCACAAAATAATTTGCTTAAGATTTCATTTTCC
ATT-------------------------------------------------------
>chr2B_717
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TGGGTGCTCCCTCTCCCT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CTCTCCCCCGCCC---C---CG---CTTCACTGCTCCAGCCTTCAACTCTC
TTTCTCCCACCTCTGCTCCACTCTGCTCCAGCCTTCAATCAATTCCGAGCACTCCACCAGCTAAATTGTGTGAGTTCTCT
CTTTTCTATTTATTATGTGTCCTTCGTTGCATTG--CTCTCCCTGTGTCTTGGCGCAAGCTTGTTCGGTTCTTGATCACT
TGTG---------CTCCCATGGTTTCGTTCTTGACTTCATGCTGATTTCATTCAGTTCTTGGTTGGTTTCA-AGAATGAG
AGAGATGGAGGCACTGAAGAAGAAAGGCCACAGATCCTTGGCCAAGGCCAAACCAGTGAAGCCCTCCTACAACTACAGTG
CCCCATCCAGGCACAAGCGTTCCAAGAGGTCGGTGGAAACATCATCTTCTCCTCTGCAAATTTCCCTCTTCCTTTTCTCA
TCTTGATTGATGCTTATAAGTTAGGGCTCATCAAATTGTTTTTATGCTTCGTGTAACGGCAGTGATTTGGAGGAGAAAAA
TGCCAAGGATGCGCTGCATTCTTCGCACAAAGCGTCTCATAATCAGCCAAAGTTGGTAAGTTTTTGC---------CCTT
---CTTGTGCTTCATATAGTGCCACTGGTTCTCTGTAGATTTGAGATTTTTCCC----TTTTTTTTTGTGGTGTCTTCTA
GA----------------------------------ATGGTACAAACTCAAACTCTCATCTGCAGAGCGAAACCAACAAG
GGAATCCACCCCAAGACTGACACGCAAGACTCCCTCAGAAAAGAGGCAAGCA----------------------------
------------------------------------------------------------------CCCAGCATTTTTTT
ATTTTA----TTTTTGCTGTTGTTAGCTCACAGGCAGAAGAAATCAGACTCTGAATCTTGAAAGAATTGCCACAACATTT
TCATCTCCGGATGCTGAACTGCACTCAGCATCATTTTGGTCTAATGAGATGACGATGCTCTGATGCAGATTGTGCAGCTG
GAGAGGCACCTTGACGATCAGCAAACGGTGCGCGGCGCACTGGAGAAAGCGTTGGGGCCCAACCCTGCTCCGGTCACTCT
CTCCAATGAGAGCCCAATCCTCCAGGTGAGACTT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>chr2A_735
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------CTCTCTCCCCCACTCTCCCG---CTTCACTGCTCCAGCCTTCAAGTCTC
TTTCTCCCACCTCTGCTCCACT--GCCCAACCCTTAAATCAATTCCGAGCACTCCACCAGCTAAATTGTGTGAGCTCTCT
CTCTTTTCTTTCTTTTGTATTCTTCGTTGCATTTCTCTCTCCCTGTGTGTTGGCGCAATCTTGTTTGGTTCTTGATCA--
------------CCTGCCATGGTTTCCATCTT---------CTGATTTGGTTGGTTTCAAGACAGTTTGTGGAGAATGAG
AGAGATGGAGGCACTGGAGAAGAAAAGCCACAGCTCCTTGGCCAAAGCCAAACCACTCAAGCCCTCCTACAACTACAATG
CCCCATCCAGGCACAAGCGTTCCAAGAGGTTGGAAACATCATCATCTTCTCCTCTGCAAATTTCCCTCTTCCTTTTCTCA
TCTTGATTGATGCTTATAAGTTAGTGCTCATCAAAATGTTTTTATGCTT--TGTAATGGCAGTGATTTGGAGGAGAAAAA
TGCCAACGATGCGCTGCATTCTTCGCAGAAAGCGTCTCATAATCAGCCAAAGTTGGTAAGTTTTTGT---------CCTT
TTTCTTGTGCTCCATATAGTGCCACTGCTTCTCTGTAGATTTGAGATTTTCCC-------TTTTTTTGTGGTGTCTTCTA
GA----------------------------------ATGGCAGAAACTCAAACTCTCATCTGCAGAGCGAAACCAACAAG
GGAATCCAGCCCAAGACTGACACGCAAGACTCACTCAGAAAAGAGGCAAGCA----------------------------
------------------------------------------------------------------TCA-----------
--TCTTTTTTTTTTTGCTGTTGTTAGCTCACAGGCAGAAGAAATCAGAGACTGAATCTTGAAAGAATTGCCACAACATTT
TCATCTCCGGATGCCGAACCGCACTCAGCATCATTTTGGTCTAATGAGATGACGATGCTCTGACGCAGATTGTGCAGCTG
GAGAGGCACCTTGACGATCAGCAAACGGTGCGCGGCGCACTGGAGAAAGCGTTGGGTCCCAACCCTGCTCCGCTCACTCT
GTCCAATGAGAGCCCAATCCTCCAGGTGAGACTTACAGTTTTAC---CAGGAAATCTATCTTTCATTTTAACACCATCTG
TTCATTCATTAAT-----AGTAGTATGTGTTCATCAGATGAAACTGAAACTGATGTTT--TCTTTTGGCAGCCCACTAAC
CAGCTGATAAGGGAGGTTGCCACATTGGAACTGGAGATCAAGCACCTGGAGCAGTACCTCCTAACACTGTACAGGAAGGC
ATTTGAGCAAGCGCCCACGGTGCCATCCTCACTTGTCGTCCGTCAGGAGGAGCCGGCGCCGCCAAAGCCGTCA-------
-----------------------------------------------GTGAGCTCACGGTCTGCGCAGATGGAGGAAACG
CCCAAGCCAAAGGCCACCGCCGGAAGAGGTGGCGATGCGATGCTCCATTACAGCTGCCCTCCCCTTAGCAAGAGGAGGAA
TGGCACGATGATGGAGGACTGCTCTCCGTCCACATGCCCAACCAAGG---------------------------------
--------------------------------------------------------------------------------
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>chr2D_770
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--------------------------------------------------------------------CCTTCAACTCTC
TTTCTCCCACCTCTGCTCCACT--GCTCCAGCCTTCAATTAATTCCGAGCACTCCACCAGCTAAATTGTGTGAGTTCTCT
CTCTTCTCTTTCTTTTGTATTCTTCGTTGCATTTC--TCTCCCTGCGTCTTGGCGCAAGCTTGTTCGGTTCTTGATCAGT
TGCA---------CTGCCATGGTTTTTCTCCTGAGTTGATGCTGATTTCATCCAGTTCTTGGTTGGCTTCA-AGAATGAG
AGAGATGGAGGCACTGGAGAAGAAAGACCACAGATCCTTGGCCAAAGCCAAACCACTCAAGCCCTCCTACAACTACAATG
CCCCATCCAGGCACAAGCGTTCCAAGAGGTTGGTGGAAACATCATCTTCTCCTCTGCAAATTTCCTCCTTCTTTTTCTCA
TA--------------------AGTGCTCATCAAAATGTTTTTATGCTT--TGTAATGGCAGTGATTTGGAGGAGAAAAA
TGCCAAGGATGCACTGCATTCTTCGCAGAAAGCGTCTCATAATCACCCAAAGTTGGTAAGTTTTTGT---------CCTT
TTTCTTGTGCTCCAGATAGTGCCA--------------ATTTGAGATTTTCCC-------TTTTTTTGTGGTGTCTTCTA
GA----------------------------------ACGCTAGAAACTCAAACTCTCATCTGCAGAGCGAAACCAACAAG
GGAGTCCAGCCCAAGACTGACACGCAAGACTCCCTCAGAAAAGAGGCAAGCA----------------------------
------------------------------------------------------------------CCCAGCATTTTATT
TTT---ATTTTTTTTGCTGTTCTTAGCTCACAGGCAGAAGAAATCAGAGACTGCATCTTGAAAGAATTGTCACAGCATTT
TCATCTCCGGATGCTGAATTGCACCCAGCATCATTTTGGTCTAAT--------GATGCTCTGATGCAGATTGTGCAGCTG
GAGAGGCACCTTGACGATCAGCAAACGGTGCGCGGCGCACTGGAGAAAGCGTTGGGTCCCAACCCTGCTCCGCTCACTCT
CTCCAATGAGAGCCCAATCCTCCAGGTGACACTTATAGTTTTATTATCAGGGAATCTATCTTTCATTTTAACACCATCTG
TTAATTCATGAATAGTACAGTAGTATATGTTCATCAGATGAAA--GAAACTGATGTTTTTTCTTTTGGCAGCCCACTAAC
CAGCTGATAAGGGAGGTTGCGACATTGGAGCTGGAGATCAAGCACCTGGAGCAGTACCTCCTAACACTGTACAGGAAGGC
ATTTGAGCAAGCGCCCAC------------------------------------------------------ATTGCCAT
CCTCACTTGCCGTCCGTCAGGAGGAGCCGGCGCCGCCAAAGCCGTCGGTGAGCTCACGGTCCGCGCTGATGGAGGAAACG
CCCAAGCCAAAGGCCACCGCCGGAAGAGGTGGCGATGCAATGCTCCATTACAGCTGCCCTCCCCTTAGCAAGAGGAGGAA
TGGCACGATGATGGAGGACTGCTCTCCGTCCACATGCCCAACCAAGG---------------------------------
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>SNPs
-----S--------------------------------------------------------------------------
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------------------------------------------------------S------S------------------
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-------------------------------------------------------------------S------------
-----------------------------------------------------------------------S--------
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----------------------------------------------S---------------------------------
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-------------------------------S------------------------------------------------
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-----------------------------------------S--------------------------------------
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-----S-S------------------------------------------------------------------------
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--------------------------------------------------------S-----------------------
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>forward_1588
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-------------------------------------------------CCCCGCTTCGTTCCTTGAA------------
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>reverse_3126
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-----AGTAAAGGCGACTGTCGAAAGA-----------------------------------------------------
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----------------------------------------------------------
