>input_sequence_80447
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-------------------------------------------------------------------ATGGAAGGGGATA
AGTTCCAGGAAGAGATCGAATGCCTCATGGAGGTGAAGCACAAAAACGTCGCACGGTTTCTAGGATATTGTGCCGACACG
CAAGGGAGAGAGGTAGACTTTGAGGGAAGCTTTGTAATGGCAGATGTACGACGACAGTTCCTCTGTTTTAAGTATCGACA
CAAAGGTAGGAACATGTGATGACATCTTTTTTGGGGTCATAATTATTGGTTCCCATCTGGTAACAACAATTACTGTGGTG
CCATATACTCCAGCATATGAAACTAAAGTACTTCAACTATCTAGAATACTAACTCCTCTATCTTCTCTTTGTGTATAGAT
ACACACAGTGGAGTTGAATGGAGAGAGCACTATGAAATAATCAA-GGAAATTGCAAGGGTTTATGGTACCTTCACCGTAA
TCATATTATTCACTTGGACCTAA---------------------------------------------------------
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>chr6D_1_TraesCS6D01G315500
ACCAGCTGAGTTCAAAGAAAATATCTAGTATCAGCTCCGTGGAGGTGCCCGTCCCTATATCACACCCCCATCACCCAGTT
GGTGAACTCACTC--------CAGCAACCATATCCCTTCTCCTGCCCCGGACTCCTGCAGCATCTGAAGCTCGCCTTCGC
CACGCA----------TGCAGGTAACCACGATATTTTCCTTGCT-AAGATCTTATCAGAAAAACAAGCTGGG--------
--------TGTTGTTCTCTCGTAGTGCTAGCGAGCTCTAGCTTTGAGGGCCCGATTCTGCATCGTGGTTAGGAGGATGTT
TTGGTAGAATCCTCCGTATGCTTGCCTGTGTCGCTGT------CCTCTGTGAACTGGTTACCACCAGTTGCTGTGCTT--
---CCAGCTTGTTATCCCCTCCAAATAAGATGTCAACGCCTCAAGGGCCTCGGCAGATCTAGTTGCGGTGGGGAACGATA
GCAAGCGAAAGAAAAATTGTTGCTTGGTCCAGGAACGAGATATGCTTGCTCGATCTA----TTTCACAGTAATGATGTTC
ATGTTTATTAATTATTTTTGTAAGGTGTCTAGCTTTGTGAGGATTTGAGGCTTTGTTTGGGGGTCGTTCTTTTCAGAGAT
GGTCAACACCTCATGTTGCTCCCACAGTATAGGCTAGATACGCCGACTGTGCTGCCATCGGTGTACACCGAGCAGCTGGG
AGTTTCTTTTCAGTTTTCTCCGGTGGCTGT-GGCCTTGAGGGGTGGTGCGCTGAGCCTCTGATTAACAGAGGAAGAGCCT
GTCACGTGGTATACATGCACCCTAGTTAGAC-------------------------------------------------
TCTGTCGGTTCACATCGAGGCGTATTTGAGTATATATCCAGGCCAGCCCCATGGAAACTAGAGTTCTGTTATGGAACCTC
TTCTATGTGCAGAACAGAGGAGTGATTATTGCATAT-------ATAATACTTGAGTGATTCAGGAGTTGAGTTTAGTAGC
CTTATAAACCGTGTATGTTTTGATTTACCTTTGTTTGCAGGGTACTACATGAAGTGACCTAGAACACATGGAAGGGGATA
AGTTCCAGGAAGAGATCGAATGCCTCATGGAGGTGAAGCACAAAAACGTCGCACGGTTTCTAGGATATTGTGCCGACACG
CAAGGGAGAGAGGTAGACTTTGAGGGAAGCTTTGTAATGGCAGATGTACGACGACAGTTCCTCTGTTTTAAGTATCGACA
CAAAGGTAGGAACATGTGATGACATCTTTTTTGGGGTCATAATTATTGGTTCCCATCTGGTAACAACAATTACTGTGGTG
CCATATACTCCAGCATATGAAACTAAAGTACTTCAACTATCTAGAATACTAACTCCTCTATCTTCTCTTTGTGTATAGAT
ACACACAGTGGAGTTGAATGGAGAGAGCACTATGAAATAATCAA-GGAAATTGCAAGGGTTTATGGTACCTTCACCGTAA
TCATATTATTCACTTGGACCTAAAACCTGATAATATATTGTTGGATGATAATATGGTACCGAAAATAGCTGACTTTGGTC
TCTCAAAGTACTTTCGTGCCGGATTATCATTTCAAAATTTGGATGAACATCGTAAGTTGGCTAATCTCTTGAAATCTTGA
TCTTTCCGTTAGCCATATATGAATCCTATTGCATATTTTTGTATTCATCCATCAATTTTCTTGCAGGGGTTATTTGGCAC
CAGAATTCTACGGTGGAAAGCTCACATTCAAGTCAGACATATACAGTTTGGGTGTTATAATCATAGAGATATTAATATGC
CGTATGAAATATACCAAAGACTGCTCTGCTTTGAGTATATACCCAAAGGGTATCTTTATGATTATATCACCGGTCACATT
CAAGTCAGACATATACAGTTTGGGTGTTATAATCATAGAGATACTAACATGACATATGGGATATACCAAAGATTGCTCTG
CTTTGAGTATGTATCTAAAGGGAGTCTTCATGATTATATCACCGGTACGATCACCATACCATCTCTCTTTTTTATCAATA
AAACTAGCACATTATCTCATGTAACCGTGTGGGAAATGTCTTTAATCATTTTCAATCTTTTTGAGACACTATGGTGTAAC
AACATTTTGTAAGAACATTAACTAGACTATCAGGCTACCCGCAAAAAAAAA-----CTAGACTATCAGGCAGATGTATTG
TTTCTATGAGATCTTGGATTGATGTGTGTAATTTAAGTTCATGTCATGAGTTGAACAATCATCCATTTGTAAAGATCCCA
CAAATGTACATGACATAGGTTCAACTATTATCATTTGCGACATGTTCATATACAGTCACGATGATGTATACATACATGCA
ATGTTGTGAAGATCTATCAGCATGTGGTCATTAATTCATTCATTATAAGATGGTCCACCATGGTCAAATGTTTTGTCTTC
TCCTTTCGTTTTCTTGCTATCTCTGTTTTTACCATCATAATAGAAGATTTGGTTCAAGCATCAAAAGC
>chr6A_1
ACCAGCTGAGTTCAAAGAAAATATCTACTATCAGCTCCGTGGAGGTGCCCGTCCCTATATCACACCCCCATCACCCTGTT
GGTGAACTCACTC--------CAGCAACCACATCCCTTCTCCTGCCCCGGACTCCTGCAGCACCTGAAGCTCGCCTTCGC
CACGCATCTGCGCTTCTGCAGGTAACTGCGATATTTTCCTTGCTTAAGATCTTATCAGAAAATCAAGTTGGGGTGTTGCT
GCAGACTGTGCTGTTCTCTCGTGCTC---GCGAGCTTTAGCTCTGAGGACCTTATTGTGCATCGTGGTT---AGGATGTT
TTGGTACAATC-------TGCTTGCCTGTGTCGTTGCCCTAGCCCTCTGTGAACTGGTTACCACCAGTTGCTTTGCTTTG
CTTCCAGCTTGATGTCAAACGCCTGAAGGG-----------CG------TCGACAAATCTAGTTGCGGTGGGGAACGATA
GCAAACGAAAGAAAAATTGTTGCTTGGTCTAGGAACGAGATATGCTTGCTCGATCTACGTATTTCACAGTAATGATGTCC
ATGTTTTATCATTATTATTGTAAGGTGTCTAGCGTTGTGAGGATCTGAGGCTTTGTTTGGGGATCATTC-TTTCAGAGAT
GGTCAACACCTCATGTTGTTAGTCTGG-----------TACGCTGACTGTGCTGCCATCGG-------------GCTGGG
AGTTTCTTTTCTGTTTTCTCCGGTGGCTGT-G-CCTCGTGGGGTGGTGAGCTGGGCCTCTGATTAACAGAGGAAGAGCCT
GTCACGTGGTATACATGCACCCTAGTTAGAC-------------------------------------------------
TCTGTCGGTTCACATCAAGGCGTATTTGAGTAA--ATCCAGGCCAGCCCCATGGAAGCAAGAGTTCTGTTATGGAAC---
--CTATGTGCAGATCAGAGGAGTGATTATTGCATAT-------ATAATACTTGAGTGATTCAGGAGTTGGGTTTACTAGC
CTTATAAACCGTGTATGTTTGCTC-TACCTTTGGTTGCAGGGTACTACATGAAGTGACCTAGAACACATGGAAGGGGATA
AGTTCCAGGAAGAGATCAAATGCCTCATTGAGGTGAAGCGCAAAAACATCACACGGTTTCTAGGATATTGTGCCGACACA
CAAGGGAGAGTGGTAGACTTTGAGGGAAGCTTTGTAATGGCAGATGTACGACGACAGTTCCTCTGTTTTAAGTATCGACA
CAAAGGTAGGAACATGTGATGACATCTTTTCTTGGGTCATAATTATTGGTTCCCATCTGATAACAACAATTACTGTGGTG
CCATATACTCTAGCATATGAAACTAAAGTACTTCAACTGTTTCGAATACTAACTCCTCTATCTTCTCTTTGTGTATAGAT
ACGTACAGTGGAGTTGAATGGAGAGAGCACTATCAAATAATCAAAGGAAATTGCAAGGGTTTATGGTACCTTCACCGTAA
TCATATTGTTCATTTGGACCTAAAACCTGATAATATATTGTTGGATGATAATATGGTACCGAAAATAGCTGACTTTGGTC
TCTCAAAGTACTTTCGTGCCGGATTATCATTTCAAAATTTGGATGAACATCGTAAGTTGGCTAATCTCTTGAAATCTTGA
TCTTTCCGTTAGCCATATATGAATCATATTGCATATTTTAGTATTCATCCATCAATTTTCTTGCAGGGGTTATTTGGCAC
CAGAATTCTACGGTGGAAAACTCACATTCAAGTCAGACATATACAGTTTGGGTGTTATAATCATAGAGATATTAATATGT
CATATGAAATATACCAAAGACTGCTCTGCTTTGAGTATATACCCAAAGGGTATCTTTATGATTATATCACCGGTCACATT
CAAGTCAGACATATACAGTTTGGGTGTTATAATCATAGAGATACTAACATGACATATGGGATATACCAAAGATTGCTCTG
CTTTGAGTATGTACCTAAAGGGAGTCTTCATGATTATATCACCGGTACGATCACCATATCATCTCTCTTTTTTATCAATA
AAACTAGCACATTATCTCATGTAACCGTGTGGGAAATATCTTTAATCATTTTCAATCTTTTTGAGACACTGTGGTGTAAT
AACATTTTGTAAGAACATTAACTAGACTATCAGGCTACCCGCAG-AAAAAA-----CTAGGCTATCAGGCAGATGTGTTG
TTTCTACGAGATCTTGGATTGATATGCGTAATTTAAGTTTAGGTCATGAGTTGAACAATCATCCATTTGTAGAGAGCCCA
CAAATGTACATGACATAGGTTCAACTATTATCATTTGCGACATGTTCATATACAGTCACAGTGATCTATACATACATGCA
ATGTTGGGAAAATCTATCAACATGTGGTCATTAATTCATTCATTATGAGATGGTCCACCATGGTCGAATGTTTTGTCTTC
TCCTTTCATTTTCTTGCTATCTCTATTTTTACCATCATAATAGAAGATTTGGTTCAAGCATCGGAAGC
>chr6B_1
ACCAGCCGAGTTGAAAGAAAATATCTACCATCAGCTCCGTGGAAGTGCCCGTCCCTATATCACACCCCCATCACCCAGTT
GGTGAACTCACTCCAGGTCTCCAGCAACCATATCCCTTCTCCTGCCCCGGACTCCTGCAGCATCTGAAGCTCGCCTTCGC
CGCGCGTCTGC--------AGGTAACTACGATGTTTTTCTTGCTTAAGATCTTATCAGAA----AAGTTGGGGTGTTGCT
GCAGACTGTG---TTCTCTCGTGCTC---GCGAGCTTTAGGTTTGAGGACCTTATTCTGCATCGTGGTT---AGGATGTT
TTGGTAGAATCATCCGTATGCTGTCCTGTGTCGCTGTCCTAACCCTCTGTG-----------------------------
CTTTCAGCTTGTTATCCCCTCCAAATAATATGTCAACGCCTCG------TCGACAGATCTAGCTGCGGTGGGGAACGATA
GCAAACGAAAGAAAATTTGTTGCTTGATCT-GGAACGAGATAGGCTTGCTCGATCTA----TGTCACAGTAATGGTGTTC
ATGTTTTATTATTATTATTGTAAGGTGCCTAGCTTTGTGAGGATCTGAGGCTTTGTTCAGGGATCATTC-TTTCAGAGAT
GGTCAACACCTCATGTTGCT---------------AGATACGCTGACTGTGCTGCCATCGGTGTACACCGA---GCTGGG
AGTTTCTTTTCTGTTTTCTCCGTTGGCTGTGG-CCTTGTGGGGTGGTGAGCTGGGCCTCTGATTAACAGATGAAGAGCCT
GTCACGTGGTATACATGCACCCTAGTTAGACTCCGTGGGTTCACATCGAGGCGTATTTGAGTGTATCCAGGTAGTTAGAC
TCTGTCGGTTCACATCGAGGCGTATTTGAGTG--TATCCAGGCCAGCCCCACGGAAACGAGAGTTCTGTTATGGAACCTC
TTCTATGTGCAGAACATAGGAGTGATTATTGCATATTTCTGTTATAATACTTGAGTGATTCAGGAGCAGGGTTTAGTAGC
CTTATAAACCGTCTATGCTTGCTC-TACCTTTGTTTGCAGGGCACTACATGAAGTGACCTAGAACACATGGAAGGGGATA
CGTTCCAGGAAGAGGTCAAATGCCTCATGGAGGTGAAGCACAAAAACGTCGCACAGTTTCTAGGATATTGTGCCGACACA
CAAGGGAGAGTGGTTGACTTTGAGGGAAGATTTGTAATGGCAGATGCACGACGTCAGTTCCTCTGTTTTAAGTATCTACG
CAAAGGTAAGAACATGTGCTGACATCTTTT-TTGGGTCATAATTATTGGTTCCCATCTGGTAACAACAATTACTGTGGTG
CCATATACTCCAGCATATGAAACTAAAGTACTTCAACTATCTAGAATACTAACTCCTCTATCTTCTCTTTGTGTATAGAT
ACATACAGTGGAGTTGAATGGAGAGAGCACTATGAAATAATCA-AGGAAATTGCAAGGGTTTATGGTACCTTCACCGTAA
TCATATTGTTCACTTGGACCTAAAACCTGATAATATATTGTTGGATGATAATATGGTACCGAAAATAGCTGACTTTGGTC
TCTCAAAGTACTTTCGTGCCGGATTATCATTTCAAAATATTGATGAACATCGTAAGTTGGCTAATCTCTTGAAATCTTGA
TCTTTCTGTTAGCCATATATGAATCCTATTGCATATTTTAGTATTCATCCATCAATTTTCTTGCAGGGGTTATTTGGCAC
CAGAATTCTACGGTGGAAAACTCACATTCAAGTCAGACATATACAGTTTGGGTGTTATAATCATAGAGATATTAATATGT
CATATGAAATATACCAAAGACTGCTCTGCTTTGAGTATATACCCAAAGGGTATCTTTATGATTATATCACCGGTCACATT
CAAGTCAGACATATACAGTTTGGGTGTTATAATCATAGAGATACTAACATGACATATGAGATATACCAAAGATTGCTCTG
CTTTGAGTATGTACCTAAAGGGAGTCTTCATGATTATATCACCGGTACGATCACCATACCATCTCTCTTTTTTACCAATA
AAACTAGCACATTATCTCATGTAACCGTGCGGGAAATATATTTAATCATTTTCAATCTT-TTGAGACACTGTGGTGTAAC
AACATTTTGTAAGAACATTAACTAGACTATCAGGCTTCCTGCAAAAAAAAAAAAAACTAGACTATCAGGCAGATGTGTTG
TTTCTACGAGATCTTGTATTGATATGCGTAATTTAAGTTTAGGTCATGAGTTGAACAATCATCCATTTGTAAAGAGCCCA
CAAATGTACATGACATAGGTTCAACTATTATCATTTGCGACATGTTCATAT----TCACGATGATCTATACATACATGCA
ATGTTGGGAAGATCTATCAGCATGTGGTCATTAATTCATTCATTATGAGATGGTCCACCATGGTTGAATGTTTTTTCTTC
TCCTTTCAATTTCTTGTTATCTCTATTTTTACCATCATACTAGAAGATTTGGTTCAAGCATCAGAAGC
>SNPs
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------S----S------------
----------S-----------SS-SSSS-------S-----------S--SS----------------SSS--------
-----------S------------------------------------------------------------S-------
------------------------------------------SSSSSSS---S---------------------------
----S------------------------S--------------------------------------------------
------SS-S------S---------------------------S-----------------S--S---S----------
--------------------SSSSSS-SSSSSSSS--------S---------------------------SSS------
-----------S--------------------S-----S---------S----S--------------------------
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--------------------------------SS------------------------S---------------------
---------------------------------------------------------------------S----------
--------------------SSSSS-------------------------------------------------------
-----------------S-------------------------------------------------------------S
----------S---------------------------------------------------------------------
------------------------------S-S-----------------------------------------------
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---S----------------------------------------------------------------------------
-------S------------------------------------------------------------------------
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---------------------------------------S----------------------------------------
-------------------S-----------------------------------------------------------S
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-------------------------------------S--------------------------------S---------
----------------------------------------------------------------------------S---
------S----------------S--S------------S-S---------------------------------S----
-----------------------------------------------------------------S--------------
------S---------------------------------------S------------------S--------------
-------S----------------S--------------------------------------S----
>forward_447
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---------------------------AGATGTCAACGCCTCAAGGG---------------------------------
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>reverse_1444
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---CACAGTGGAGTTGAATGGAGAGA------------------------------------------------------
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>forward_668
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--------CCTCATGTTGCTCCCACAGT----------------------------------------------------
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>reverse_2407
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------TGAAGATCTATCAGCATGTGGTCA--------------------------------------------------
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