>input_sequence_80436
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---------------------------------------ATGGCGCCGAAGAAGACGCCGAAGGGCAAGTCGGGCTTCTT
CGGCGTGAGGCAGAAGCCCTCCGGCAACTGGGGTGTGGAGTTCTCCGACGCCGGAAGGCGTTGGTGGATCGGCACGTACC
CCTCCGCCCACGAGGTCGCGTGTGCCTACGACGTGGCAGTGTGGCGTGCCGAGAGGCCTCGGTCGCACCTCAACTTTCCA
AAGATCGAGAGTCGGGC-GGAAGCGAAGATGCTTGTGCCGCAAGGCATCAACATGAAGGAGATCACGAC------GAA--
-GAAGAAGAAGA---CGAAGAAGCCGTCGGTTGTCGTCAGTGCTGGCGAGACCGATGAAGAGGCGATGGCGTGGTTTTCT
CGGGAG---CATCCGGAGTACGTCCAGGCCGAGATGGAGTACTACTGGAAGCGTGA-GGTGGAGCAGAAGAAGAAGGGGC
CGAAGAAGTAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr5B_1_TraesCS5B01G051700
TAGTCATGCTGAACATTTTCTCAAATTCACAACCACTTAAGAGCATCTCCAATAGATGGTCCAAATGTAAAAATAACTAA
CTTTTGGACCGTCTGGGGCAAAAAACGCTACTCCAGTAGACGGTCCATATGCAAAAAAAATATGGACCGTGGCCTCCTCG
TGATTTAAAATCGAACACCTCGCGATGCAAATATACATCACGAGATGCATATGGTGCAAAACCAACCGCCACCCGCGAAC
GCCCAACCGCCACTTCATTTCCATTCCCGCCCGCCCGTCCGCCGCCGCCCCACCGCCGCCCCGCCACCGCCCCGCCGCCT
CCACACCCCGCCGTCGCCCCGCCGCACGCTGCCCGCATCAGATCCGGCGCTGCCCCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAC
CGCCCCGCCTGCCACCGCCACCCCGCAGCTCTGCCC--------------------------------------------
--------------------CGCACGCCACCGCTGCCCCGCAACACCGCCCCGCCCGGCTCCGTCCGC------CACCGC
CCTGGCCGCACGCCGCTCCACCGCTCTC---------CGATGGCGCCGAAGAAGACGCCGAAGGGCAAGTCGGGCTTCTT
CGGCGTGAGGCAGAAGCCCTCCGGCAACTGGGGTGTGGAGTTCTCCGACGCCGGAAGGCGTTGGTGGATCGGCACGTACC
CCTCCGCCCACGAGGTCGCGTGTGCCTACGACGTGGCAGTGTGGCGTGCCGAGAGGCCTCGGTCGCACCTCAACTTTCCA
AAGATCGAGAGTCGGGC-GGAAGCGAAGATGCTTGTGCCGCAAGGCATCAACATGAAGGAGATCACGAC------GAA--
-GAAGAAGAAGA---CGAAGAAGCCGTCGGTTGTCGTCAGTGCTGGCGAGACCGATGAAGAGGCGATGGCGTGGTTTTCT
CGGGAG---CATCCGGAGTACGTCCAGGCCGAGATGGAGTACTACTGGAAGCGTGA-GGTGGAGCAGAAGAAGAAGGGGC
CGAAGAAGTAGGATGAGGCCGGTCCCTCGACGATGATCCCCATCGAGTCCTCTTCCGAGGAGGACTAGGCAGACTTCTCG
G------AGGAGGAGGAGGAGGAGGAGGGGTGCGACGACCCGACGAAGGAGGAGTTCTGG-AGCAGTTCCGTAGCTCCGA
TGAGGAGTAGTTTATCTAGTAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATGGACTAGTAGCATGTCG-TTTTACATCTTTATTTTGGACCATCTATTGGAGTTGCTCTTTTG-------
------GACCATCTATTTGGACCATCCGTTGGAGTTGAGCTTTTTTCGAAGCTCCAAAACGCACTTTTTGACGGTCCAAA
TTTTACATCTCCGGTTTTGGACCGCCAAATTTTGGACCATCTATTGGAGATGCTCTAAGCATAATTTTGAATACGGCAAG
ACGGATCATGTTGTTTTCCTGTCTGAAAAATAGAGTACCCGTACTGACTGAAGATTGCGTTTGAACTGAGCTATTTATTA
ACACTATAAACTTTACTCTATCAATATTGGATTGATCTCATGGAACATTTTGAACTGATTCAAGATGAACACATAAGAGT
TTTTTTAATAAGGGAATGAACACGTGAACTTACATGAGTGAATTTTTTTAGATTCTTTCTTAACATTTTCTGCTGGCATA
CAAACTGACATGCCTTTTTTAGCTAAACTTTTGTTATTTTAGAATCTTTGGTCAAATGGCCAAACAAATACCATTTGACA
TAACAACTTCTGCTCGCAACCATGTACGATGGAGGTATAACAGGGTATCAAGACATGCACATAGTCACCGTGACAATAAA
CAGAACTGAAAGAGCAAGAAATACTCGTTTTCCGGAGAGATCACAAGCTCACAATCATTCCAACTAGCACTAAGGACCAG
CAGCGCGAGTAACCTGAACCCATGGGTGAGTTCATAACTGCAGCTTTTGGACAGTGATACTTGAGCGTCTCA
>chr5D_1
TAGTCATGTTGAACATTTTCTCAAATTCACAACCGCTTAAGAGCATCTCCAATAGATGGTCCAAATGTAAAAATAACTAA
CTTTTGGACCGTCTGGGGCAAAAAACGCTGCTCCAACAGACGGTCCATATGCAAAAAAAAT-TGGACCGCGGCCTCCTCG
TGATTTAAAATCGAACACCTCGCGATACAAATATACATCACAAGATGCATCTGGTCCAAAACCAGCCGCCGCCCGCGAAC
GCCCAACCGCCACTTCATTTCCGTTCCCGCCCGCCCGCACGCGACCTCCCGCCCGT----ACGCCGCCGCCCCGCCGCCT
CCACACCCCGCCGTCGCCCCGCCGCACGCCGCCCGCATCAAATCCAGCGCCGCCCCGCTCCCCACCGTTGTTTCCACGCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCGCACGCTACCGCCGCCCCGCAACACCGCCCCGCCCGGCTCCGTCCGC------CACCGC
CCCGGCCGCACGCCGCTCCACCGCTCTC---------CGATGGCGCCGAAGAAGACGCCGAAGGGCAAGTCGGGCTTCTT
CGGCGTGAGGCAGAAGCCCTCCGGCAACTGGGGTGTGGAGTTCTCCGACGCCGGAAGGCGTTGGTGGATCGGCACGTACC
CCTCCGCCCACGAGGCCGCGCGTGCCTACGACGTGGCGGTGTGGCGTGCCGAGAGGCCTCGGTCGCACCTCAACTTTCCA
GAGATCGAGAGTCGGGC-GGAAGCGGAGATGCTTGTGCCGCA-GGCATCGACATGAAGGAGATCACGAC------GAA--
-GAAGAAGAAGA---CGAAGAAGTCGTCGGTTGTCGTCAGTGCTGGCGAGACCGATGAGGAGGCGATGGCGAGGTTTGCT
CG---GGAGCATCCGGAGTACGTCCAGGCCGAGATGGAGTACTACTGGAAGTGTGA-GGTGGAGCAGAAGAAGAAGGGGC
CGAAGAAGAAGGATGAGGCCGGTCCCTCAACGGTGATCCCCATCGAGTCCTCTTCCGAGGAGGACTGGGCAGACTTCTCG
G------AGGAGGAA---GAGGAGGGGGGGTGCGACGACCCGACGAAGGAGGAGTTCTGGGAGCAGTTCCGTAGCTCCGA
TGAGGAGTACTTTATCTAGTAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATTGACTAGTAGTATGTCG-TTTTACATCTTCATTTTGGACCATCTATTGGAGTTGCTCTTTTG-------
------GACCATCT-------------GTTGAAGTTGAGCTTTTTTCGGAGCTTCAAAACGCACTTTTTGACGGTCCAAA
TTTTACATCTCCGGTTTTGGACCGCCAAATTTTGGACCATCTATTGGAGATGCTCTAAGCATAATTTTGAATACGGCAAG
ACGGATCATGTTGTTTTCCTGTCTGAAAAACAGAGTACTCGTACTGACTGAAGATTGCGTTTGAACTGAGCTATTTATTA
ACACTATAAACTTTACTCTATCAATATTGGATTGATCTCATGGAACATTTTGAACTGATTCAAGATGAACACAT-AGAGT
TTTTTTAATAAGGGAATGAACACGTGAACTTACATAAGTGAATTTTTTTAGATTCTTTCCTAACATTTTCTGCTGGCATA
CAAACTGGCATGCCTTTTTTAGCTAAACTTTTGTTATTTTAGAATCTTTGGTCAAATGGCCAAACAAATACCATTTGACA
TAACAACTTCTGCTCGCAACCATGTACGATGGAGGTATAACAGGGTATCAAGACATGCACATAGTCACCGTGACAATAAA
CAGAACTGAAAGAGCAAGAAATACTCGTTTTCCGGAGAGATCACAAGCTCACAATCATTCCAACTAGCACTAAGGACCAG
CAGCGCGAGTAACCTGAACCCATGGGTGAGTTCATAACTGCAGCTTTTGGACAGTGATACTTGAGCGTCTCA
>chr3D_38
-------------------------------------TAAGAGCATCTCCAATAGATGGTCCAAATGTAAAAATAACTAA
CTTTTGGACCGTCTGGGGCAAAAAACGCTGTTCCAACAGACGGTCCATATGCAAAAAAATT-TGGACCGCGGCCTCCTCG
TGATGTAAAATGCAACACCTCGCGATGCAAATATACATCACGAGATGCATCTGGTCCAAAACCAGCCGCCGCCCGCGAAC
GCCCAACCGCCACTTCATTTCCGTTCCCGCCCGCCCG----CGACCTCCCGCCCGT----CCGCCGCCGCCCCGCCGCCT
CCACACCCCGCCG-----------CACGCCGCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CCCGCCACCGCCGCCCCGCAGCACCGCCCCGCCCGGCTCCGTCCGC------CACCGC
CCCGGCCGCATG-CGCTC---------T---------AGATGGCGCCGAAGAAGACGCCGAAGGGCAAGTCAGGCTTCTT
CGGCGTGAGGTAGAAGCCCTCCGGCAACTGGGGTGTGGAGTTCTCTGGCGCCGGAAGGCGTTGGTGGATCGGCACGTACC
CCTCCGCCCACGAGGCCGCGTGTGCCTACGACGTGGCGGTGTGGCGTGCCGAGAGGCCTCGGTCGCACCTCAACTTTCCA
GAGATCGAGAGTCGGGC-GGTAGCGGAGATGCTTGTGCCGCAGGGCATCAACATGAAGGAGATCACGAC------GAA--
-GAAGAAGAAGAAGATGAAGAAGCCGTCGGTTGTCGTTAGTGCTGGCGAGACCGATGAGGAGGCGATGGCGAGGTTTGCT
CG---GGAGCATCCGGAGTACGTCCAGGCCGAGCTGGAGTACTACTGGAAGCGTGAGGC-GGAGCAGAAGAAGAAGGGGC
CGAAGAAGGAGGATGAGGCCGGTCCCTCGACGGTGATCCCCATCGAGTCCTCTTCCGAGGAGGACTGGGCAGACTTCGAG
G------AGGAGGAG---GAGGAGGAGGGGTGCGACGACCCAACGAAGGAGGAGTTCTGGGAGCAGTTCCGTAGCTCCGA
TGAGGAGTAGTTTATCTAGCAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATGGACTAGTAGTATGTCGTTTTTACATCTTCATTTTGGACCATCTATTGGAGTTGCTCTTTTGGACCATC
AATTTGGACCATCT-------------GTTGGAGATGAGCTTTTTTCGGAGCTCCAAAACGCACTTTTTGGCGGTCCAAA
TTTTACATCTCCGGTTTTGGACCGCCAAATTTTGGACCATCTATTGGAGATGCTCTAAGCA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr5B_891
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------GCCACCGCCGCCTCGCAGTTCCGCCC--------------------------------------------
--------------------CGCACGCCACCGCCGACCCGCA-----GCACCGCCCGACTCCGTCCGC------CACCAC
CCCGGCCGCACGCTGCTCCATCGCTCTC---------CGATGGCGCCGAAGAAGACGCCGAAGGGCAAGTCGAGCTTCTT
CGGCGTGAGGCAGAAGCCCTCCGGTAACTGGGGTGTGGAGTTCTCCGACGCCGGAAGGCGTTGGTGGATCGGCACGTACC
CCTCCGCCCACGAGGCCGCGCGTGCCTATGACGTGGCGGTGTGGCGTGCCGAGAGGCCTCAGTCGCACCTCAACTTTTCA
GAGATCGAGAGTCGGGGTGGTAGCGGAGATGCTTGTGCCGCAGGGCATCAACATGAAGGAGATCACGAC------GAA--
-GAAGAAGAAGA---CGAAGAAGCCGTCGGTTGTCGTCAGTGCTGGCGAGACCGATGAGGAGGCGATGGCGAGGTTTGCT
CG---GGAGCATCCTGAGTACGTCCAGGCCGAGATGGAGTACTACTGGAAGCGTGA-GC-GGAGCAGAAGAAGAAGGGGC
CGAAGAAGGAGGATGAGGCCGGTCCCTCGACAGTGATCCCCATCGAGTCCTCTTCCGAGGAGGACTGGGCAGACTACTCG
GAGGAGGAGGAGGAG---GAAGAGGAGGGGTGCGACGACCCGACAAAGGAGGAGTTCTGGGAGCAGTTCTGTAGCTCCGA
TGAGGAGTAGTTTATGTAGTAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATGGACTAGTAGCATGTCG-TTTTACATCTTCATTTTGGACCATCTATTGGAGTTACTCTTTTGGACCATC
AATTTGGACCATCT-------------GTTGAAGTTGAGCTTTTTTCGGAGCTCCAAAACGCACTTTTTGACGGTCCAAA
CTTTACATCTCCGGTTTTGGACCGTTAAATTTTGAACCATCTATTGAAGATGCTCTTAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr4A_911
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------CTGCCC--------------------------------------------
--------------------CGCCCGCCACCGCCACCCCGCA-----GCACCGCTCGGCTCCGTCCGC------CACCGC
CCCGGCCGCGCGCCGCTCCT------------------GATGGTGCCGAAGAAGACGCC-AAGGGCAAGTCGGGCTTCTT
TGGCGTGAGGCAGAAGCCCTCTGGCAACTGGGGTGTGGAGTTCTCCGACGCCGGAAGGCGTTGGTGGATCGGCACGTACC
CCTCCACCCACGAGGCCGCGCGTGCCTACGACATGGCGGTGCA---TGCCGAGAGGCCTCGGTCGCACCTCAACTTTCCA
GAGATCGAGAGTCGGGC-GGAAGCGGAGATGCTTGTGCCGCGGGGCATCAACATAAAAGAGATCACGAC------AAA--
-GAAGAAGAAGA---CGAAGAAGCCATCGGTTGTCGTCAGTGCTGGCGAGATCGATGAGGAGGCGATGGCGAGGTTTGCT
CG---GGAGTATCCGGAGTACGTCTAGGCCGAGATGGAGTACTACTGGAAGCGTGAGGC-GGAGCAGAAGAAGAAAGGGC
CGAAGAGGAAGGATGAGGTCGGTCCCTCCACGGTGATCCCCATCAAGTGCTCTTCCGAGGAGGACTGGATGGACTTCTC-
--------GGAGGAG---GAGGAGGAGGGGTGCGATGACCCGACGAAGGAGGAGTTCTGGGAGCAGTTCCGTAGCTCCGA
TGAGGAGTAGTTTATCTAGTAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATGGACTAGTAGTATGTCG-TTTTACATCTTCATTTTGGACCATCTATTGGAGTTGCTCTTTTGGACCATC
AATTTGGACCATCT-------------GTTGGAGTTGAGCTTTTTTCGGAGCTCCAAAACGCTTTTTTTGACGGTCCAAA
TTTTACATCTCCGATTTTGGACCGCCAAAATTTGGACCATCTATTGGAGATGCTCTAAGCATAA----------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr6D_931
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------GCCCCGCAGCACCGCCCCGTCCGGCTCCGTCCGC------CACCGC
CCCGGCCGCACGCCGCTC---------C---------CGATGGCGCCGAAGAAGACGTCGAAGGGCAAGTCGGGCTTCTT
CGGCGTGAGGCAGAAGCCCTCTGGTAACCGGGGTGTGGAGTTCTCCGACGCCAGAAGGCGTTGGTGGATCAGCACGTACC
CCTCCGCCCACGAGGCCGCGCGTGCCTACGACGTGGCGGTGTGGCGTGCCGAGAGGCCTCGGTTGCACCTCAACTTTCCA
GAGATCGAGAGTCGGGC-GGTAGCGGAGATGCTTGTGCCGCAGGGCATCAACATGAAGGAGATCACGAA------GAA--
-GAAGAAGAAGAAGAAGAAGAAGCCGTCGGTTGTCGTCAGTGCTGGCGAGACCGATG-GGAGGCGATGGCCAGGTTTGCT
CG---GGAGCATCCGGAGTACGTCCAGGCCGAGCTGGAGTACTACTGGAAGCGTGAGGC-GGAGCAGAAGAAGAAGGGGC
CGAAGAAGGAGGATGAGGCCGGTCCCTCGACGGTGATCCCCATCGAGTCCTCTTCCGAGGAGGACTGGACAGACTTCTCG
G------AGGAGGAG---GAGGAGGAGGGGTGCGACGACCCGACGAAGGAGGAGTTCTGGGAGCAGTTCCGTAGCTCCGA
TGAGGAGTAAAACATCTAGCAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATGGACAAGTAGTATGTCATTTTTATATCTTCATTTTGGACCATCTATTGGAGTTGTTTTTTTGGACCATC
AATTTGGACCATCT-------------GTTAGAGATGAGCTTTTTTCGAAGCTCCAAAACACACTTTTTGACGGTCCAAA
TTTTACATCTCTGATTTTGGACCGCCAAATTTTAGACCATCTATTGAAGATGCTCTTAGC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr3D_932
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------CCCCGCAGCACCGCCCCGCCCGGCTCCGTCCGC------CACCGC
CCCGGCCGCACACCGCTC---------C---------CGATGGCGCCGAAGAAGACGCCGAAGGGCAAGTCGGGCTTCTT
CGGCGTGAGGCAGAAGCCCTCCGGCAACTGGGGTGTGGAGTTCTCCGACGCCGGAAGGCGTTGGTGGATCGGCACGTACC
CCTCCGCCCACGAGGCTGCGCGTGCCTACGACGTGGCGGTGTGGCGTGCCGAGAGGCCTCGGTCGCACCTCAACTTTCCA
GAGATCGAGAGTCGGGC-GGTAGCGGAGATGCTTGTGCCGCAGGGCATCAACATGAAGGAGATCACGACGACGAAGAA--
-GAAGA---AGA---TGAAGAAGCCGTTGGTTGTCGTTAGTGCTGGCGAGACCGATGAGGAGGCGATGGCGAGGTTTGCT
CG---G---CATCCGGAGTACGTCCAGGCCAAGCTGGAGTACTACTGGAAGCGTGAGGC-GGAGCAGAAGAAGAAGGGGC
TGAAGAAGGAGGATGAGGCCGGTCCCTCGACGGTGATCCCCATCGAGTCCTCTTCCGAGGAGGACTGGGCAGACTTCTCG
GAGGAGGAGGAGGAG---GAGGAGGAGGGGTGCGACGACCCGACGAAGGAGGAGTTCTGGGAGCAGTTCCGTAGCTCCGG
TGAGGAGTAGTTTATCTAGCAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATGGACTAGTAGTATGTCGTTTTTACATCTTCATTTTGGACCATCTATTGGAGTTGCTCTTT-GGACCATC
AATTTGGACCATCT-------------GTTGGAGATGAGCTTTTTTCGGAGCTCCAAAACGCACTTTTTGGCGGACCAAA
TTTTACATCTCCGATTTTGGACCGCCAAATTTTGGACCATCCATTGGAGATGCTCTAA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr7A_940
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CATCGCCCCGCCCGCCACCGCCGCCCCGCAGCACCGC
CCCGGCCGCACGCCGCTC---------C---------CGATGGCGCCAAAGAAGACGCCGAAGGGCAAGTCGGGCTTCTT
CGGCGTGAGGCAGAAGCCCTCCGGCAACTGGGGTGTGGAGTTCTCCGACGCCGGAAGGCGTTGGTGGATCGGCACGTACC
CCTCCGCCCACGAGGCCGTGCGTGCCTACGACGTGGCGGTGTGGCGTGCCGAGAGGCCTCGGTCACACCTCAACTTTTCA
GAGATCGAGAGTCGGGC-GAAAGCGGAGATGCCTATGCTGCAGGGAATCAACATGAAGGAGATCACGAC------GAA--
-GAAGAAGAAGA---CGAAGAAGCCGTCGGTTGTCGTCAGTGCTGGCGAGACCGATGAGGAGGCGATTGTGAGGTTTGCT
CG---GGAGCATCCGGAGTACGTCCAGGCCGAGATGGAGTACTACTGGAAGCGTGAGGC-GGAGCAGAAGAAGAAGGGGC
CGAAGAAGGAGGATGAGGCCGGTCCCTCGACGGTGATCCCCATCGAGTCCTCTTCCGAGGAGGACTGGGCAAACTTCTC-
-----GGAGGAGGAG---GAGGAGGAGGGGTGCGACGACCCGACGAAGGAGGAGTTCTGGGAGCAGTTCCGTAGCTCCGA
TGAGGAGTAGTTTACCTAGTAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATAGACTAGTAGTATGTCGTTTA-ACATCTTCATTTTGGACCATCTATTGGAGTTGCTCTTTTGGACCATC
AATTTGGACCATCT-------------GTTGAAGTTGAGCTTTTTTTGGAGCTCCAAAACGCACTTTTTGACGGTCCAAA
TTTTACATCTCCGCTTTTGGACCGCCAAATTTTGGACTATCTATTAGAGATGCTCTAA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr5B_948
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CGCCCGGCTCCGTCCGC------CACCGC
CTCGGCCGCACGCCGCTC---------CACTGCTCTCCGATGGCGCCGAAGAAGACGCCCAAGGGCAAGTCGGGCTTCTT
CGGCGTGAGGCAGAAGCCCTCCGGTAACTAGGGTGTGGAGTTCTCCGACGCCGGAAGGCGTTGGCGGATCGGCACGTACC
CCTCCGCCCACGAGGCCGCGCGTGCCTACGACGTGGCGGTGTGGCGTGCCGAGAGGCCTCGGTCGCAGCTCAACTTTCCA
GAGATCGGGAGTCGGGC-GGTAGCGGAGATGCTTGTGCCGTAGGGCATCAACATGAAGGAGATCACGAC------GAA--
-GAAGA---AGA---CGAAGAAGCCGTCGGTTGTCGTCAGTGCTGGCGAGACTGATGAGGAGGCGATGGCGAGGTTTGCT
CG---GGAGCATCCGGAGTACGTCCAGGCCGAGCTGGAGCACTACTGGAAGCGTGAGGC-GGAGCAGAAGAAGAAGGGGC
CGAAGAAGGAGGACGAGGCCGGTCCCTCGACGGTGATCCCCATCGAGTCCTCTTCCAAGGAGGACTGGGCAGACTACTCG
GAGGAGGAGGAGGAG---GA------GGGGTGCGATGACCCGGCGAAGGAGGAGTTCTGGGAGCCGTTCCGTAGCTTCGA
TGAGGAGTAGTTTATGTAGTAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATGGACTAGTAGTATGTCA-TTTTACATCTTCATTTTGGACCAACTATTGGAGTTGCTTTTTTGGACCATC
AATTTGGACCATCT-------------GTTGGAGTTGAGCTTTTTTTGGAGCTCCAAAACGCACTTTTTGACGGTCTAAA
TTTTACATCTCCAGTTTTGGACCGCCAAATTTTGGACCATCTATTGGAGATGCTCTAA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr5D_966
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACCGC
CCCGGCCGCACGCCGCTC---------CACCGCTCTCCAATGGCGCCAAAGAAGACACCGAAGGGCAAGTCGGGCTTCTT
CGGCGTGAGGCAGAAGCCCTCCGGCAACTGGGGTGTGGAGTTCTCCGATGCCGGAAGGCGTTGGTGGATCGGCACGTACC
CCTCCGCCCACGAGGCCGCGCATGCCTACGACGTGGCGGTGTGGCGTGCCAAGAGGCCTCGGTCGCACCTCAACTTTCCA
GAGATCGAGAGTCGGGC-GGAAGCGGAGATGCTAGTGCCGCAGGGCATCAACATGAAGGAGATCACGAC------GAAAA
AGAAGA---AGA---CGAAGAAGCCGTCGGTTGTCGTCATTGCTGGCGAGACTGATGAGGAGGCGATGGCGAGGTTTGCT
CG---GGAGCATCCGGAGTACGTCCAGGCTGAAATGGAGTACTACTGGATGCGTGAGGC-GGAGCAGAAGAAGAAGGGGC
CGAAGGAGGA---TGAGGCCGGTCCCTCGACGGTGATCCCCATCGAGTCCTCTTCCGAGGAGGACTGGGAAGACTTCTCG
GAGGAGGAGGAGGAG---GA------GGGGTGCGACGACCCGATGAAGGAGGAGTTCTGGGAGCAGTTCCGTAGCTCCGA
TGAGGAGTAGTTTATCTAGTAGTTTGAATAAGTAGTAGTTGAAGTTGATGTATGAAACTATGTTAAATTTGATGTTTGAA
CTATGTTGAATGGACTAGTAGTATGTCGTT-TTACATCTTCATTTTGGACCATCTATTGGAGTTGCTCTTTTGGACCATC
AATTTGGAACATCT-------------ATTGGAGTTGAGCTTTTTTCGGAGCTCCAAAATGCACTTTTTGACGGTCCAAA
TTTTACATCTTCGGTTTTGGACCGCCAAATTTTGGACCATATATTCGAGATGCTCTTAATGCAT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>chr3D_1012
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GAAGACGCCGAAGGGCAAGTCGGGCTTCTT
CGGCGTGAGGCAGAAGCCCTCCGGCAACTGGGGTGTGGAGTTCTCCGACGCCGGAAGGTGTTGGTGGATCGGCACGTACC
CCTCCGCCCACGAGGCCGCGCGTGCCTACGACGTGGCGGTGTGGCGTGTCGAGAGGCCTCGGTCGCACCTCAACTTTCCA
AAGATCGAGAGTCGGGC-GGAAGCGGAGATGCTTGTGCCGCAGGGCATCAACATGAAGGAGATCACGAC------GAA--
-GAAGAAGAAGA---CGAAGAAGCCGTCGGTTGTCGTCAGTGCTGGCGAGACCGATGAGGAGGCGATGGCGAGGTTTGCT
CG---GGAGCATCCGGAGTACGTCCAGGCCGAGATGGAGTACTACTGGAAGCGTGAGGC-GGAGCAGAAGAAGAAGGGGC
CGAAGAAGGAGGATGAGACCGGTCCCTCGACGGTGATCCCCATCGAGTCCTCTTCCGAGGAGGACTGGGCAGACTTCTCG
GAGGAGGAGGAGGAG---GA------GGGGTGCGACGACCCGACGAAGGAGGAGTTCTGGAAGCAGTTCCGTAGCTCCGA
TGAGGAGTAGTTTATCTAGTAGTTTGAATAAGTAGTAGTTGAAG-TGATGTATGAAACTATGTTGAATTTGATGTTTGAA
CTATGTTGAATGGACTAGTAGTATGTCGTT-TTACATCTTCATTTTGGACCATCTATTGAAGTTGCTCTTTTGGACCATC
AATTTGGACCATCT-------------GTTGGAGTTGAGCTTTTTTCGGAGCTTCAAAACACACTTTTTGACGGTCCATA
TTTTACATCTCCGATTTTGGACCGCCAAATTTTGAACCATCTATTGGAGATGCTCTAAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>SNPs
--------S-------------------------S---------------------------------------------
-----------------------------S-----SS------------------------S-------S----------
--------------------------------------------------S----S--------S-----S---------
----------------------S--------------SS---SS--S---SS---SSSSS-----S--------------
-----------------------------S----------S----S----S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------SSSSS
SSSSSSSSSS---------S--S-----S---------------------------------------------------
---------------------------------S----------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S---------------------S------------------------------------------
-------------------------S----------------S-------------------------------------
----------------------------------------------------------S------------S-----S--
--SSS---------------------------------------------------------------------------
--------S-----------------------S---------------------------------S-------------
---------------SSS--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------SSSSSSSSSSSSS-----------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------S-----------------------------------------
--------------------------------------------------------------------------S-----
-----------------------------------S-----------------------S--------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CAACCGCCACTTCATTTCCA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_1432
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TGGTTTTCT
CGGGAGCATCC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>forward_1323
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------GAAGATGCTTGTGCCGCAA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
>reverse_2220
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TTAACATTTTCTGCTGGCATA
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
