>input_sequence_80379
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-------------------------------ATGAGAGAGATGGAGGCACTGGAGAAGAAAGGGCACAGATCCTTGGCCA
AA------CCAGTGAATCCCCC------CTACAATACCCCATCTAGGCACAAGCGTTCCAAAAGGTTGGAAACATTA---
-------------------------CCTTTTTCTCAGGTTGATTGATGCTGATAAA----TGCGTATAAAAATGTATTTA
TGCTTTGAGTAATGGCAGCGATTTAGAGGAGAAAAATGC-AAGGATGCATAGCCTTCTTCGCAGAAAGTTTCT---AATC
ACCCAAAGCCAGTAAGTTTCCCCTTTTGTTACCCTTTTTCTTGTGCTTCATATA---CCACTGGTTCTCTGCAGATTTGA
GATTTTTTTTTTGTTTTGTTTCTATGGTGTCTTCCAGA----------------------------------ATGGTAGG
AACTCAAACTCTCGTCTGCAGAACGAAACCAACAAGGGAATCCATCCCAAG-----------------------------
--------------------------------------------------------------------------------
---------AGTGACACGCAAGACATCCTAA-------------------------------------------------
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------------------
>chr1A_1_TraesCS1A01G412600
TCTATTGCTTGTGGAACTGTAGAAACAACGATTAATGTGATGTATGTGAGGGG-CCATTAAAGTGACTTACCTGGTGAGG
AGATGTGTTTGGCATTGATTAAGAA------------TCGTCTGATTGTATTGTCT-TCCTTTAGGAGAAGATGTGTTCA
TTGCTGAAACTGGATACAAGGGTGCTTCCTTCTTCCAAGATATTGACGAAGCCTGGCAGCTATAGATTTT----------
--------------------------------------------------------CCTCAGCACAAGTGCAAGCAGATC
TTAATCAATGTCACTCCAGTTGATGATGTTATGAAGCTTCCTTCAGTAACTGGTATGACCTGACGCCGGCGTTGTTTTGT
GTTCAGAGAAGATGAGCTATTGTATTCTTCCTTTTTATAGTTGTTGCAGGTTTTGCTAGATCTAAATCCATAGACAAAGC
ACTGATTGTTTGCTCTCTTGGAGCTATTATAATTTGCACAACTATATTTTAAGATTCATTTTGCTTACATTCATTTAGTG
AAGCCCCTGCAAAAGTCAATACTCATTTGAGTGGTGACGACTGCACATGA-----TTTT-TTTACATTCATTTTTAGTGA
AGAGCTCCAGTATTTCAGGCTAGCTTGGTGGCTTCCATATGAAATGATGAAAATTAATAATTGAAACCGAGATATGCAAA
ACCTACTAGCTTAGGA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TTAGGATTGTTAACTCGTTTTAGTGAACATGCATGTGTATAACCTTGCTGTTGTTCAGGCAAGTGGGTGCTCCCTCTCCC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CTCTCTCTCTCCC
ACTCCCCCCGCTTCGTTCCTCGAGCCTTCAACTCTCTTTCTCCCACTTCTGCTTCAC--TGCTTGAGCCTTCAATTAATT
CCGTACACTGCACCAGCTAAATTGTACGAGTTCT----TATTTATTTATTTTGTATTCTTCGTTGCATTTCTCTCTCCCT
GTGTCTTAGCGCAAGCTTGTTTTCTTCTTGATCACTTGTACTTTGGTGCCTGCCATGGTTTCCTTCTT---------CTG
ATTTCATTCACTTCTTGGTTGGTTTCA-AGAATGAGAGAGATGGAGGCACTGGAGAAGAAAGGGCACAGATCCTTGGCCA
AA------CCAGTGAATCCCCC------CTACAATACCCCATCTAGGCACAAGCGTTCCAAAAGGTTGGAAACATTA---
-------------------------CCTTTTTCTCAGGTTGATTGATGCTGATAAA----TGCGTATAAAAATGTATTTA
TGCTTTGAGTAATGGCAGCGATTTAGAGGAGAAAAATGC-AAGGATGCATAGCCTTCTTCGCAGAAAGTTTCT---AATC
ACCCAAAGCCAGTAAGTTTCCCCTTTTGTTACCCTTTTTCTTGTGCTTCATATA---CCACTGGTTCTCTGCAGATTTGA
GATTTTTTTTTTGTTTTGTTTCTATGGTGTCTTCCAGA----------------------------------ATGGTAGG
AACTCAAACTCTCGTCTGCAGAACGAAACCAACAAGGGAATCCATCCCAAG-----------------------------
--------------------------------------------------------------------------------
---------AGTGACACGCAAGACATCCTAAGAAAAGAGACAGGAAGCAAT-------TCTTTT---TTTTTTCTGTTCT
TACTAGCTCACATGCAGAAGAAATCAGAGACTGCATCTTGAAAGAATTGTTACAACATTTTCATTTCTGGATGCACC---
--------CAGCATTTTGGTCTAATGGGATGACGATGATCTGATGTAGATTGTGCAGCTGGAGAGGCACCTTGACCGTCA
GCAAACGGTGCACGGCGCACTGAAGAAAGCCTTGGGTCCTAACTCTGCTC-AGTTACTCTATTCAATGAGAGGGCAATCC
TCAAGGTGACACTTGT--TTTTAC---TAGGACATGTATAGTATAGTATATTCCATCAGA--------------------
------------------------TGAAACTGATGTTTTC---TTTGGCAGCCAACTAACCAACTGATAAGGGAGGTTGC
CACACTGGAGCTGGAGATCAAGCACCTGGAGTAGTACCTCATAACATTGTACATGAAAGCATTTGAGGAAGCACCTAC--
----------------------------------------------------A---------------------------
---------------------------TTGAGTTCACGGTCTGCGGTGCTCGAGGAAACACCAAAGGCAAAGGCGACTGT
CGAAAGAGGTAGTGATGCAATGCTCCATTGCAGCTG-CCTCCCCTTAGCAAGAGGAGGAATGGCAC----ATGGAGGATT
CCTCTCCGTCCAAATGCCCAACGAAGGGTCGATGGTCATGAATCAAAGTTAACTTCCTCTCTACTTATCATTTAACTGCG
ACAAAGAATTTGAGCCAGCACCAATACAACTGTCTGATGCTTTGCAAAGTAGGCATTAAGAATAGAGGCCTCTTAAGAAT
ATGAAAGAGAACTTGCAATTCCATTTGTCAATGTGCAGTGCCAAAGAACACATTTACATTTTGCAGGTATGTTCTGTTTC
ATACTTACAAAATAAGTGACATGGTGCCCAGATATTCAACTCATAATTTGTCATTACTTTCCACTTCGTTTATACATATG
TTGGTTTGAGCAATGCATTAGAATTAATCACAAATTAATTTTCTTAAGATTTCATTTTCCATTGCTTGTTTGGTATTAAG
ATGATGACTGACATAGGC
>chr7A_1
TCTATTGCTTGTGGAACTGTAGAAACAACGATTAATGTGATGTATGTGAGGGG-CCATTAAAGTGACTTACCTGGTGAGA
AGATGTGTTTGGCATTGATTAAGAA------------TCGTCTGATTGTACTGTCT-TCCTTTAGGAGAAGATGTGTTCA
TTGCTGAAACTAGATACATGGGTGCTTCCTTCTTCCAAGATATTGACGAAGCCTGGC-----------------------
--------------------------------------------------------------------------------
-TAATCAATGTCACTCCAGTTGATGATGTTATGAAGCTTCCTTCAGTAACTGGTATGACTTGACGCCGGCGTTGTTTTGT
GTTCAGAGGAGATGAGCTGTTGTATTCTTCCTTTTTATAGTTGTTGCAGGTTTTGCTAGATCTAAATCCATAGACAAAGC
ACTGATTGTTTGCTCTCTTGGAGCTATTATAATTTGCACAACTATATTTTAAGATTCATTTTGCTTACATTCATTTAGTG
AAGCCCCTGCAAAAGTCAATATTCATTTGAGTGGTGACGACTGCACATGAT----TTTT-TTTACATTCATTTTTAGTGA
AGAGCTCCAGTATTTCAGGCTAGCTTGGTGGCTTCCATATGAAATGATGAAAATTAATAATTGAAACTGAGATATGCAAA
ACCTACTAG------A----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TTAGGATTGTTAACTCGTTTTAGTGAACATGCATGTGTATAACCTTGCTGTTGTTCAGGCAAGTGGGTGCTCCCTCTCC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CTCTCTCTCTCCC
ACTCCCCCCGCTTCGTTCCTTGAACCTTCAACTCTCTTTCTTCCACTTCTGCTTCAC--TGCTTGAGCCTTCAATTAATT
CCGTACACTGCACCAGCTAAATTGTACAAGTTCT----TATTTATTTATTTTGTATTCTTCGTTGCATTTCTCTCTCCCT
GTGTCTTAGCGCAAGCTTGTTTTCTTCTTGATCACTTGTACTTTGGTGCCTGCCATGGTTTCCTTCTT---------CTG
ATTTCATTCACTTCTTGGTTGGTTTCA-AGAATGAGAGAGATGGAGGCACTGGAGAAGAAAGGGCACAGATCCTTGGCCA
AA------CCAGTGAAGCCCCC------CTACAATACCCCATCTAGGCACAAGCGTTCCAAAAGGTTGGAAACATTA---
-------------------------CCTTTTTCTCAGGTTGATTGATGCTGATAAA----TGCGTATAAAAATGTATTTA
TGATTTGAGTAATGGCAGCGATTTAGAGGAGAAAAATGC-AAGGATGCATAGCCTTCTTCGCAGAAAGTGTCT---AATC
ACCCAAAGCCAGTAAGTTTCCCCTTTTGTTACCCTTTTTCTTGTGCTTCATATA---CCACTGGTTCTCTGCAGATTTGA
GATTTTTTT---GTTTTGTTTCTGTGGTGTCTTCCAGA----------------------------------ATGGTAGG
AACTCAAACTCTCGTCTGCAGAATGAAACCAACAAGGGAATCCATCCCAAG-----------------------------
--------------------------------------------------------------------------------
---------AGTGACACGCAAGACATCCTGAGAAAAGAGACAGGAAGCAAT-------TC--TT---TTTTTTCTGTTCT
TACTAGCTCACATGCAGAAGAAATCAGAGACTGCATCTTGAAAGAATTGTTACAACATTTTCATTTCTGGATGCACC---
--------CAGTATTTTGGTCTAATGGGATGACGATGATCTGATGTAGATTGTGCAGCTGGAGAGGCACCTTGACCATCA
GCAAACGGTGCACGGCGCACTGGAGAAAGCGTTGGGTCCTAACTCTGCTC-AGTTACTCTATTCAATGAGAGCGCAATCC
TCAAGGTGACACTTGT--TTTTAC---TAGGACATGTATAGTATAGTATATTCCATCAGA--------------------
------------------------TGAAACTGATGTTTTC---TTTGGCAGCCAACTAACCAACTGATAAGGGAGGTTGC
CACACTGGAGCTGGAGATCAATCACCTGGAGTAGTACCTCATAACATTGTACATGAAAGCATTTGAGGAAGCACCTAC--
----------------------------------------------------A---------------------------
---------------------------TTGAGTTCACGGTCTGCGGTGCTCGAGGAAACACCAAAAGTAAAGGCGACTGT
CGAAAGAGGTAGTGATGCAATGCTCCATTGCAGCTG-CCTCCCCTTAGCAAGAGGAGGAATGGCAC----ATGGAGGATT
CCTCTCCGTCCAAATGCCCAACGAAGGGTCGATGGTCATGAATCAAAGTTAACTTCCTCTCTACTTATCATTTAACTGCG
ACAAAGAATTTGAGCCAGCACCAATACAACTGTCTGATGCTTTGCAAAGTAGGCATT-----------------AAGAAT
ATGAAAGAGAACTTGCAATTCCATTTGTCAATGTGCAGTGCCAAAGAACACATTTACATTTTGCAGGTATGTT-TGTTTC
ATACTTACAAAATAAGTGACATGGTGCCCAGATATTTAACTCATAATTTGTCATTACTTTCCACTTCGTTTATACATATG
TTGGTTCGAGCAATGCATTAGAATTAATCACAAATTAATTTTCTTAAGATTTCATTTTCCATTGCTTGTTTGGTATTAAG
ATGATGACTGACATAGGC
>chr7D_1
TCTGTTGCTTGTGGAATTGTAGAAACAACGATTAATGTGATGTATGTGAGGGG-CCATTAAAGTGACTTACCTGGTGAGA
AGATATGTTTGGCATTGATTAAGAAAACAATACATTTTCGTCTGATTGTATTGTCT-TCCTTCAGGAGAAGATGTGTTCA
TTGCTGAAACTGGATACAAGGGTGCTTCCTTCTTCCAGGATATCGACGAAGCCTGGCAACTATAGATTTT----------
--------------------------------------------------------CCTTAGCACAAGTGCAGGCAGATC
TTAATCAATGTTACTCCAGTTGATGATGTTATGAAGCTTCCTTCAGTAACTGGTATGACCTGACGCCGGCGTTGTTTTGT
GTTCAGAGGAGATGAGCTGTTGTATTCTTCCTTTTTATAGTTGTTGCAGGTTTTGCTAGATCTAAATCCATAGACAAAGC
ACTGATTGTTTGCTCTCTTGGAGCTATTATAATTTGCACAATTATATTTTAAGATTCATTTTGCTTACATTCATTTAGTG
AAGCCCCTGCAAAAGTCAATATTCATTTGAGTGGTGACGATTGCACATGA-----TTTT-TTTACATTCATTTTTAGTGA
AGAGCTCCAGTATGTCAGGCTAGCTTGGTGGCTTCCATATGAAATGATGAAAATTAATAATTGAAACCGAGATATGCAAA
ACCCACTAGCTTAGGA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TTAAGATTGTTAACTCGTTTTAGTGAACATGCATGTGTATAACCTTGCTGTTGTTCAGGCAAGTGGGTGCTCCCTCTCCC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CTCTCTCCCACTC
---CCCTT-GCTTCGTTGCTCGAGCCTTCAACTCTCTTTCTCCCACTTCTGCTTCAC--TGCTTGAGCCTTCAATTAATT
CCGTACACTGCACCAGCAAAATTGTACGAGTTCT----TATTTATTTATTTA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TTTA--TTTTGT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------ACAGTGA
GTTCACGGTCTGCGGCGATCGAGGA-------------------------------------------------------
-------------------------------------------------AACACCATA----------------------
--------------------------------------------------------------------------------
-ACATTGGAGCTGGAGATCAAGCACCTGGAGCAGTACCTCATAACATTGTACATGAAAGCATTTGAGGAAGCACCTAC--
----------------------------------------------------A---------------------------
---------------------------GTGAGTTCACGGTCTGCGGCGATCGAGGAAACACCAAAGGCAAAGGCGACTGT
CGAAAGAGGTAGTGATGCAATGCTCCATTACAGCTG-CCTCCCCTTAGCAAGAGGAGGAATGGCAC----ATGGAGGATT
CCTCTCCATCCAAATGCCCAAGGAAGGGTTGATGGTCATGAATCAAAGTTAACTTCCTCTCTACTTATCATTTAACTGTG
ACAAAGAATTTGAGCCAGCACTAATACAATTGTCTGATGCTTTGCAAAGTAGGCATT-----------------AAGAAT
ATGAAAGAGAACTTGCAATTCCATTTGTCAATGTGCAGTGTCAAGGAACACATTTACATTTTGCAGGTATGTTCTGGTTC
ATACTTACAAAATAAGTGACATGGTGCCCACATATTCAACTCATAATTTGTCATTACTTTCCACTTTGTTTATACATATG
TCGGTTCGAGCAATGCATTAGAATTAATCACAAATTAATTTGCTTAAGATTTCATTTTCCATTGCTTGTTTGGTATTAAG
ATGATGACTGACATAGGC
>chr5B_1
TCTGTTGCTTGTGGAATTGTAGAAGCAAAGATTAATGTGATGTATGTGAGGGGGCCATTGAAGTTACTTAACTGGTGAGA
AGATGCGTGTGGCATGGATTAAAAAAACAGGACATTTTCATCTGATGGTGCTGTCTTTCTTCCAGGAGAAAATGTGTTGA
TTGCTGAAACTGGATATAGAGGGTGTTTAC-CTTCCAGGATATCGACGAAGCCTGGTAGCTATGGGTCC-----------
--------------------------------------------GTTTTGGGCATATCGCAGCGCAAGCGGAGGCAGATC
TAAGTCAATGCTACTCCGGTTGGTAATGCCCTGAAGCTTCCTTTAGTAACTGGTATGACTTGACGCCGGTGTTGTTTTGT
CTTCAGAGAAGATGAGTTGTTGTATATTTGTCTTTTATAGTTGTTGCAAGTTCTGCCATATCTAAATCCATAGACAGAGT
ACTGATTGGTAGCTGTCTTGGAGCTATTATAATTTGCACAACTATTTTTTAAGATTCATTTTGCTTACATTAATTTAGTG
AAGCTCTTGGAGAAGTCAATATTCATTTGAGTGGTGACCAGTGCGCATGA-----TTTTGTTTACATTCATTTTTAGTGA
AGAGCTCCAGTATGTTAGGCTAGCTTGGTG--------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>chr2B_6
-----TGCTTGTAGAATTGTAGAAACAACGATTAATGTGATGTATGTGAGGGG-TCATTAAAGTGACTTACCTGGTGAGA
AGATGTGTGTGGCATTGATTAAAAAAACAGTACATTTTCGTCTGATATTACTGTCT-TCCTTCAGGAGAAGATGTGTTCA
CTGCTGAAACTGCATACAAGGGTGCTTCCTTCTTCCAGGATATCGACGAAGCCTGGCAACTATAGATTTTTCCTCTATGT
GATTCCGAGGGCTCCATGGAGGATCAACTTCGGTTCAGAGCCAGGTTTTGGGCATACCGCAGCACAAACAGAGGCATATC
TCAGTCAATGTTACTCCAGTTGATGATGTTATGAAGCTTCCTTCAGTAACTGGTATGACCTGACGCCGTCGTTGTTTTGT
GTTCAGAGAAGATGAGCTATTGTATTCCTCCTTTTTATAGTTGTTGTAGGTTTTGCTGGATCTAAATCCATAGACAAAGC
ACTGATTGTTTGCTCTTTTGGAGCTATTATAATTTGCACAACTATTTTTTAAGATTCATTTTGCTTACATTCATTTAGGG
AAGCCCCTGCAAAAGTCAATATTCATTTGAGTGGTAACGAGTGCACATGA-----TTTTGTTTACATTCATTTTTAGTAA
AGAGCTCCAGTATGTCAGGCTAGCTTGGTGGCTTCCATATGAAATGATGAAAATTGATAATTGAAACCGAGATATGCAAA
ACCTACTAGCTTAGGG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
TTAGGATTGTTAACTCGTTTTAGTTAACATGCATGTGTATAACCTTGCGGTTGTTCAGGCAAGTGGGTGCTACCTCTTCC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CTCTTTCCCACTC
---CTCCCA-CTTCATTGCTCGAGCCTTCAACTCTCTTTCTCCTACTTCTGCTTCAT--TGCTTGAGCCTTCAATTAATT
CCGAACACTGCACCAACTAAATTGTATGAGTTCT----TATTTATTTATTTTGTATTCTTCGTTGCATTTCTCTCTCCTT
GTGTCTTAGCGTGAGCTTGTTTTCTTCTTGATCACTTGTACTTTGGTGCCTGCCATGGTTTTCATATT---------ATG
ATTTCATTCATTTCTTGGTTGGTTTCA-AGAATGAGAGAGATGGAGGCACTGGAGAAGAAAGGACATAGATCCTTGGCCG
AA------CCAGTGAAGCCCCC------CTACAATACCCCATCAAGACACAAGCATTCAGAGAGGTTGGAAACATTA---
-------------------------TCTTTTTCTCATGTTGATTGATGCTGATAAA----TGCGTATAAAAATGTATTTA
TGCTTTGAGTAATGGCAGCGATTTAGAGGAGAAAAATGC-AAGGATGCATAGCCTTCTTCGCAGAAAGCGTCT---AATC
ACCCAAAGCCGGTAAGTTTCCCATTTCATTAACCTTTTTCTTGTGCTTCATATA---CCACTGTTTCTTTGTAGATTTGA
GATTTTTTTTA--TTTTGTTTATGTGGTGTCTTCCAGA----------------------------------ATGGTAGA
AACTCAAACTCTCGTCTGCAGAACGAAACCAACAAGGGAATCCATCCCAAG-----------------------------
--------------------------------------------------------------------------------
---------AGTGACACGCAAGACACCCTGAGAAAAGAGACAGGAACCA-------------TT---TTTTTTCTATTCT
TACTAGCTCACATGCAGAAGAAATCAGAGACTGCATCTTGAAAGAATTGTTACAACATTTTCGTTTCTGGATGCACC---
--------AAGCATTTTGGTCTAATGGGATGACGATGATCTGATGTAGATTGTGCAGCTGGAGAGGCACCTTGACCAACA
GCAAACGGTGCACGGTGCACTGGAGAAAGCGTTGGGTCCTAACTCTGCTCCAGTTACTCTATCCAATGAGAGCCCAGTCC
TCAAGCTGACACTTGT--TTTTAC---CAGGACATGTATAGTATAGTATGTTTA--------------------------
-------------------------------------TTC---TTTGGTAGCCAACTAACCAACTGACAAGGGAGGTTGC
CACACTGGAGCTGGAGATCAAGCACATGGAGCAGTACCTCATAACATTGTACATGAAAGCATTTGAGGAAGCACCCAC--
----------------------------------------------------A---------------------------
---------------------------GTGAGCTCACAGTCTGTGCCGATCGAGGAAACGCCCAAGGCAAAGGCGACCAT
CGAAAGAGGTAGTGATGCAATGCTCCATTACAGCTG-CCTCCCCATAGCAATAGGAGGAATGGCACC---ATGGAGGATT
CCTCTCCGTCCACATGCCCAGTGAAGGGTCGATGGTCATGAATCAAAGTTAACTTCCTCTCTACTTATCATTTAACCGCG
ACAAAGAATTCGAGTCGGCACTAATACAACTGTCTGATGCTTTGCAAAGTAGGCATT-----------------GAGAAT
ATGAAAGAGAACTTGCAATTCCATTGGTCAGTGTGCAATGCCAAGGAACACATTTACATTTTGTAGGTATGTTCTGGTTC
ATACTTTCAAAATAAGTGTCATGGTGCCCACATATTCAGCTCATAA-TTGTCATTACTTTCCACTTCGTTTATACATATG
TCTGTTTGAGCAATGCATTAGAATTAATCACAAATTAATTTTCTTAAGATTTCATTTTCCGTTGCTTGTTTGGTATTAAG
ATGATGACTGACATATGC
>chr5A_220
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CAGCGCAAGCGGAGGCAGATC
TCAGTCAATGCTACTCCAGTTGATAATGCCCTGAAGCTTCCTTCAGTAACTGGTATGACTTGACGCCGGTGTTGTTTTGT
GTTCAGAAAAGATGAGTTGTTGTATATTT--TTTTTGTAGTTGTTGCAAGTTCTGCCATGTCTAAGTCCATAGAAAAAGT
ACCGATTGCTAGCTGTCTTGGAGCTGTTATAATTTGCACAACTATTTTTTAAGATTCATTTTGCTTACATTCATTTAGTG
AAGCTCCTGCAGAAGTCAATATTCATTTGAGTGGTGACCAGTGTGCATGA-----TTTTATTTACATTCAATTTTAGTGA
AGAGCTCCAGTATGTCAGGCTAGCTTGGTG---------TGAAATGATGAAAAAATGTAGCTGCAACTATGCACATGATG
CAAGAGTTATATTTGTGCAGTGGTAGATGCAACTATGCACATCAGTTGGCTGCCCTCTGTTACTATCTTATTTTTTGTTG
AATTAACCAATACCAGAACACAACTCTATCCCACATGAACTCAAGTGTTATGTTGCATGCCATTTTCTGTTGTAGGAGGA
GCAGTACACATAGTGAGAGTTCAAGAGAATCTGCTGAAATTGAGGTCACAACAGAATAGGTACTTTACACTGACGTTTGT
AATGTTTTTTTCTGTATGTTGTGTGCTGATGTTTGTAATGGTATGTGGTCCTGTACTTAGCAAGCCTCATGATGCCAATT
GAAATGACATCCATGTTAATTAATGTATGTCGATTGAGCTGGCCAGTAGCCAAAACGTGACTTCTTGATGACGAGCATTG
CTGGACTCCTTCACTGATATTATTTGCCATGCTTTTATTTTTGCCATGCTTCATATTTTTGCCACGCTTCTACATATCTA
CCACACTTTTTATTTGCATTTACCTGCTGGTTTAGGCATTATATTTTATGATTAAACCTCTCTCGATGCTAGATGTTTGA
TGTTTTGCCTCTTCGAAATAAAACAAGGGATTATGTGCTCGCATGTTTGTTAATTACCAGTAAAATTGTCAAAGTGTGAT
TTTTGAATTTTCATATATTGGATAAAATTTTCTGTATGATCTTTGTGTGCTTCTGTTCTTTCATCCGATTTGGCCATGTA
GAAGTAAGATTTTATTTATGATTGCATGATGGTTCAGATCTTTTCTTTTGACGCTTTCACAATTCTA--CTCTCCATCTC
ATTCTGTCG-CTTATCTTCCTCTTGCGCTTTGTTTCATCTGTTCAGTAGCTTGCTTGTGATCCATGTGCTCATTAACTCC
A-----------------------------TTCT----CATGTGTTTCTATTTTTT-CTCTGCGACAATGCTGACGAGCC
ACTC--TCGTGTGAGTTAGTTTTAAATTCTCAATC--------------------------------TGACTGCGTGATG
GTTCAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
TATTTTCTT-------TTCATTTGTGCTTTCCCAATTCTATTCTCTAATCTGTGTGATAACTAAGACTTCATATGTTTA-
AATTCCAATTACTTTGTTGAGATTGAAGAAATTCATAACCTTGTTGTTTTTTATGTGAGCTTATCCTCTACCCTTATAGT
AGCTTACAAAATTTCAATGTACTTCACTTTAATGATATAATGTACTGCCATGGGTGGTTTGGTTAAAGTACCATTTTATG
TTGACAATCAATTACAGGCAACTCATCCTATTTGTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TCACAGTCTCAGGTTCACATTAGTTTCTCTGCATGGAGACTCAGCTT
TGTCGGTGTCACTTTCAGATCAAC--------------------------------------------------------
---------------------------------GGTCATGAATTAAAGTTAACTTCCTCTCTACTTATCCTTTAACTGCA
ACAAAGAATTCGAGCCGGCACTAATACAACTGTCTGATGCTTTGCAAAGTAAGGATT-----------------GAGAAT
ATGAAAGAGAACTTGCAATTCCATTCGTCAATGTGCAGTGCCAGGGAACCCATTTACATTTTGCAGGTATGTTCTGGTTC
ATACTTCTAAAAT---------------------TTCAACTTATAACTTGTCACTGCTTTCCACTCCATTTATACAGATG
TCTGTTCGAGCAATTCATTAGAATTAATCACAAAATAATTTGCTTAATATTTCATTTTCCATT-----------------
------------------
>chr3A_220
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CAGCGCAAGCGGAGGCAGATC
TCAGTCAATGCTACTCCGGTTGATAATGCCCTAAAGCTTCATTCAGTAACTGGTATGACTTGACGCCGGTGTTGTTTTGT
GTTCAGAGAAGATGAGTTGTTGTATATTT--ATTTTGCAGTTGTTGCAAGTTCTGCCATATCTAAATCCATAGAAAAAGT
ATTGATTGCTAGCTGTCTTGGAGCTGTTATAATTTGCACAACTATTTTTTAAGATTCATTTTGCTTACATTCATTTAGTG
AAGCTCCTGCAGAAGTCAATATTCATTTGAGTGGTGACCAT-GCGCATGATTTTGTTTTGTTTACATTCATTTTTAGTGA
AGAGCTC-----------GCTAGCTTGGTG---------TGAAATGATGAAAAAATGTAGCTGCAACTATGCACATGATG
CAAGAGTTATATTTGTGCAGAGGTAGCTGCAACTATGCACATCAGTTGGCTGCCCTATGTTACTATCTTATTTTTTGTTG
AATTAACCAATACC---------------CCCACATGAACTCAAGTGTTATGTTGCATGCCATTTTCTGTTGTAGGAGGA
GCAGTACACAGAGTGAGAGTTCAAGAGAATCTGCTGAAATTGAGGTCACAACAGATCAGGTACTTTACACTGACGTTTGT
AATGTTTTTT-CTGTATATTGTGTGCTGATGTTTGTAATGGTATGTGGTCCTGTACTTAGCAAGCCTCATGATGCCAATT
GAAATGACATCCATGTTAATTAATGCATGTCGATTGAGCTGGCCAGTAGCCAAAACATGACTTGTTGATGACGAGCATTG
TTGGACTCCTTCACTGATATTATTTGCCATGCTTTTATATTTGCCATGCTTCATATTTTTGCCACGCTTCTACATATCTA
CCACACTTTTTATTTGCATTTACCTGCTGGTTTAGGCATTATACTATATGATTAAACCTCTCTTGATGCTA-------GA
TGTTTTGCCTCTTCGAAATAAAACAAGGGATTATGTGCTCGCATGTTTGTTAATTACCAGTAAAATTGTCAAAGTGTGAT
TTTTGAATTTTCATATATTGGATAAAATTTTCTGTA--------------TTCTGTTCTTTCATC-GATTTGGCCATGTA
GAACTAAGATTTTATTTATGATTGCATGATGGTTCAGATCTTTTCTTTTGACGCTTTCACAATTCTACTCTCTCCATCTC
ATTCTGTCG-CTTATCTTCCTCTTGCGCTTTGTTTTATCTGTTCAGTAGCTTGCTTGTGATCCATGTGCTCATTAACTCC
A-----------------------------TTCT----CATGTGTTTCTATTTTTTTCTCTGCGGCAATGCTGACGAGCC
ACTC--TCGTGTGAGTTAGTTCTAAATTCTCAATC--------------------------------TGACTGCATGATG
GTTCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GA
TATTTTCTT-------TTCATTTGTGCTTTCCCAATTCTATTCTCTAATCTGTGTGATAACTAAGACTTCATATGTTTGG
AATTCCAATTACTTTGTTGAGATTGAAGAAATTCATAACCTTGCTGTTTTTTATGTGAGCTTATCCTCTACCCTTATAGT
AGCTTACAAAATTTCAATGTACTTCACTTTAATGATATAATGTACTGCCATGTGTGGTTTGGTTAAAGTACTATTTTATG
TTGACAATCAATTACAGGCAACTCATCCTATTTGTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TTACAGTCTCAGGTTCACATTAGTTTCTCTGCATGGAGACTCAGCTT
TGTCGGTGTCACTTTCAGGTCAAC--------------------------------------------------------
---------------------------------AGTCATGAATCAAAGTTAACTTCCTCTCTACTTATCATTTAACTGCA
ACAAAGAATTCGAACCGGCACTAATACAACTGTCTGATGCTTTGCAAAGTAAGGATT-----------------GAGAAT
ATGAAAGAGAACTTGCAAT-CCATTCATCAATGTGCAGTGCCAGGGAACCCATTTACATTTTGCAGGTATGTTCTGGTTC
ATACTTCTAAAAT---------------------TTCAACTTATAATTTGTCGTTGCTTTCCACTCCATTTATACAGATG
TCTGTTTGAGCAATTCATTAGAATTAATCACAAAATAATTTGCTTAAGATTTCATTTTCCATT-----------------
------------------
>chr2B_727
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTCCC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CTCCCTCTCTCCC
CCGCCCCCG-CTTCACTGCTCCAGCCTTCAACTCTCTTTCTCCCACCTCTGCTCCACTCTGCTCCAGCCTTCAATCAATT
CCGAGCACTCCACCAGCTAAATTGTGTGAGTTCTCTCTTTTCTATTTATTATGTGTCCTTCGTTGCATTG--CTCTCCCT
GTGTCTTGGCGCAAGCTTGTTCGGTTCTTGATCACTTGTG---------CTCCCATGGTTTCGTTCTTGACTTCATGCTG
ATTTCATTCAGTTCTTGGTTGGTTTCA-AGAATGAGAGAGATGGAGGCACTGAAGAAGAAAGGCCACAGATCCTTGGCCA
AGGCCAAACCAGTGAAGCCCTCCTACAACTACAGTGCCCCATCCAGGCACAAGCGTTCCAAGAGGTCGGTGGAAACATCA
TCTTCTCCTCTGCAAATTTCCCTCTTCCTTTTCTCATCTTGATTGATGCTTATAAGTTAGGGCTCATCAAATTGTTTTTA
TGCTTCGTGTAACGGCAGTGATTTGGAGGAGAAAAATGCCAAGGATGCGCTGCATTCTTCGCACAAAGCGTCTCATAATC
AGCCAAAGTTGGTAAGTTTTTGCCC------------TTCTTGTGCTTCATATAGTGCCACTGGTTCTCTGTAGATTTGA
GATTTTTCCC----TTTTTTTTTGTGGTGTCTTCTAGA----------------------------------ATGGTACA
AACTCAAACTCTCATCTGCAGAGCGAAACCAACAAGGGAATCCACCCCAAG-----------------------------
--------------------------------------------------------------------------------
---------ACTGACACGCAAGACTCCCTCAGAAAAGAGGCAAGCACCCAGCATTTTTTTATTTTA----TTTTTGCTGT
TGTTAGCTCACAGGCAGAAGAAATCAGACTCTGAATCTTGAAAGAATTGCCACAACATTTTCATCTCCGGATGCTGAACT
GCACTCAGCATCATTTTGGTCTAATGAGATGACGATGCTCTGATGCAGATTGTGCAGCTGGAGAGGCACCTTGACGATCA
GCAAACGGTGCGCGGCGCACTGGAGAAAGCGTTGGGGCCCAACCCTGCTCCGGTCACTCTCTCCAATGAGAGCCCAATCC
TCCAGGTGAGACTT------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr2A_735
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---------------------------------------------------------------------CTCTCTCCCCC
ACTCTCCCG-CTTCACTGCTCCAGCCTTCAAGTCTCTTTCTCCCACCTCTGCTCCAC--TGCCCAACCCTTAAATCAATT
CCGAGCACTCCACCAGCTAAATTGTGTGAGCTCTCTCTCTTTTCTTTCTTTTGTATTCTTCGTTGCATTTCTCTCTCCCT
GTGTGTTGGCGCAATCTTGTTTGGTTCTTGATCA--------------CCTGCCATGGTTTCCATCTT---------CTG
ATTTGGTTGGTTTCAAGACAGTTTGTGGAGAATGAGAGAGATGGAGGCACTGGAGAAGAAAAGCCACAGCTCCTTGGCCA
AAGCCAAACCACTCAAGCCCTCCTACAACTACAATGCCCCATCCAGGCACAAGCGTTCCAAGAGGTTGGAAACATCATCA
TCTTCTCCTCTGCAAATTTCCCTCTTCCTTTTCTCATCTTGATTGATGCTTATAAGTTAGTGCTCATCAAAATGTTTTTA
TGCTT--TGTAATGGCAGTGATTTGGAGGAGAAAAATGCCAACGATGCGCTGCATTCTTCGCAGAAAGCGTCTCATAATC
AGCCAAAGTTGGTAAGTTTTTGT---------CCTTTTTCTTGTGCTCCATATAGTGCCACTGCTTCTCTGTAGATTTGA
GATTTTCCC-------TTTTTTTGTGGTGTCTTCTAGA----------------------------------ATGGCAGA
AACTCAAACTCTCATCTGCAGAGCGAAACCAACAAGGGAATCCAGCCCAAG-----------------------------
--------------------------------------------------------------------------------
---------ACTGACACGCAAGACTCACTCAGAAAAGAGGCAAGCATCA-------------TCTTTTTTTTTTTGCTGT
TGTTAGCTCACAGGCAGAAGAAATCAGAGACTGAATCTTGAAAGAATTGCCACAACATTTTCATCTCCGGATGCCGAACC
GCACTCAGCATCATTTTGGTCTAATGAGATGACGATGCTCTGACGCAGATTGTGCAGCTGGAGAGGCACCTTGACGATCA
GCAAACGGTGCGCGGCGCACTGGAGAAAGCGTTGGGTCCCAACCCTGCTCCGCTCACTCTGTCCAATGAGAGCCCAATCC
TCCAGGTGAGACTTACAGTTTTAC---CAGGAAATCTATCTTTCATTTTAACACCATCTGTTCATTCATTAAT-----AG
TAGTATGTGTTCATCAGATGAAACTGAAACTGATGTTT--TCTTTTGGCAGCCCACTAACCAGCTGATAAGGGAGGTTGC
CACATTGGAACTGGAGATCAAGCACCTGGAGCAGTACCTCCTAACACTGTACAGGAAGGCATTTGAGCAAGCGCCCACGG
TGCCATCCTCACTTGTCGTCCGTCAGGAGGAGCCGGCGCCGCCAAAGCCGTCA---------------------------
---------------------------GTGAGCTCACGGTCTGCGCAGATGGAGGAAACGCCCAAGCCAAAGGCCACCGC
CGGAAGAGGTGGCGATGCGATGCTCCATTACAGCTGCCCTCCCCTTAGCAAGAGGAGGAATGGCACGATGATGGAGGACT
GCTCTCCGTCCACATGCCCAACCAAGG-----------------------------------------------------
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>chr2D_737
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-----------------------------------------------------------------------CTCCCTCTC
ACTCTCCCG-CTTCACCGCTCCAGCCTTCAACTCTCTTTCTCCCACCTCTGCTCCAC--TGCTCCAGCCTTCAATTAATT
CCGAGCACTCCACCAGCTAAATTGTGTGAGTTCTCTCTCTTCTCTTTCTTTTGTATTCTTCGTTGCATTTC--TCTCCCT
GCGTCTTGGCGCAAGCTTGTTCGGTTCTTGATCAGTTGCA---------CTGCCATGGTTTTTCTCCTGAGTTGATGCTG
ATTTCATCCAGTTCTTGGTTGGCTTCA-AGAATGAGAGAGATGGAGGCACTGGAGAAGAAAGACCACAGATCCTTGGCCA
AAGCCAAACCACTCAAGCCCTCCTACAACTACAATGCCCCATCCAGGCACAAGCGTTCCAAGAGGTTGGTGGAAACATCA
TCTTCTCCTCTGCAAATTTCCTCCTTCTTTTTCTCATA--------------------AGTGCTCATCAAAATGTTTTTA
TGCTT--TGTAATGGCAGTGATTTGGAGGAGAAAAATGCCAAGGATGCACTGCATTCTTCGCAGAAAGCGTCTCATAATC
ACCCAAAGTTGGTAAGTTTTTGT---------CCTTTTTCTTGTGCTCCAGATAGTGCCA--------------ATTTGA
GATTTTCCC-------TTTTTTTGTGGTGTCTTCTAGA----------------------------------ACGCTAGA
AACTCAAACTCTCATCTGCAGAGCGAAACCAACAAGGGAGTCCAGCCCAAG-----------------------------
--------------------------------------------------------------------------------
---------ACTGACACGCAAGACTCCCTCAGAAAAGAGGCAAGCACCCAGCATTTTATTTTTA---TTTTTTTTGCTGT
TCTTAGCTCACAGGCAGAAGAAATCAGAGACTGCATCTTGAAAGAATTGTCACAGCATTTTCATCTCCGGATGCTGAATT
GCACCCAGCATCATTTTGGTCTAAT--------GATGCTCTGATGCAGATTGTGCAGCTGGAGAGGCACCTTGACGATCA
GCAAACGGTGCGCGGCGCACTGGAGAAAGCGTTGGGTCCCAACCCTGCTCCGCTCACTCTCTCCAATGAGAGCCCAATCC
TCCAGGTGACACTTATAGTTTTATTATCAGGGAATCTATCTTTCATTTTAACACCATCTGTTAATTCATGAATAGTACAG
TAGTATATGTTCATCAGATGAAA--GAAACTGATGTTTTTTCTTTTGGCAGCCCACTAACCAGCTGATAAGGGAGGTTGC
GACATTGGAGCTGGAGATCAAGCACCTGGAGCAGTACCTCCTAACACTGTACAGGAAGGCATTTGAGCAAGCGCCCAC--
----------------------------------------------------ATTGCCATCCTCACTTGCCGTCCGTCAG
GAGGAGCCGGCGCCGCCAAAGCCGTCGGTGAGCTCACGGTCCGCGCTGATGGAGGAAACGCCCAAGCCAAAGGCCACCGC
CGGAAGAGGTGGCGATGCAATGCTCCATTACAGCTGCCCTCCCCTTAGCAAGAGGAGGAATGGCACGATGATGGAGGACT
GCTCTCCGTCCACATGCCCAACCAAGG-----------------------------------------------------
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>SNPs
-------------------------------------------------------------------------------S
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------------------------------------------------------------------------S-------
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---------------------S----------------------------------------------------------
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----------------S---------------------------------------------------------------
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---------------------------------------------------------------------S----------
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----------SS-----------S--------------------------------------------------------
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----------------------S-------S-----------------------------------------S-------
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---------------------------------------------------------SSSSSSSSSSSSSSSSS------
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>forward_582
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-AGCCCCTGCAAAAGTCAATAC----------------------------------------------------------
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>reverse_2713
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------------------------------------------------------------------------GGCAATCC
TCAAGGTGACAC--------------------------------------------------------------------
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