>input_sequence_80334
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-----------------------------------------------AT---GGCGCCCGTGCCGGCGACCACCTACAGC
CCGCTGCTCCGAGCCGTCTCTTTAGCGCAGAGCACAGCCCTCCGCGCCCCCTTCGTCGTCCGTCTCTGCTGGCGACCTCC
ACCACCATGCGCCGCGCGCCCAACCTCCAGCTCACGCCTGTGTCCCTCCAGCATCGATGAGGACCACCTCCGACCTCCAC
GTCCTCTGCTTCACCTCCTCGCGCCCGTGCTCCTCCCGTTGTTTGGTCTTCCTTACCCACCTATCAGGGACGCCATGGCT
GCCGCCCCATGGAGTTTCATCGGCCCATATCTGGCCGGGAACCAAACGAGCCCCGTGCCTGCTGCTGCCGCTGTTTTTCC
CTCTGTCAAACGAATGAACACCTTCCCCGGAGACTGCCAAGACCGTTCAGGATTCGCCAAGTACCGGTTCGAGTACGACT
ATCGCTGA------------------------------------------------------------------------
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>chr4A_1_TraesCS4A01G147300
AGACCGACGTTCCAGAAGACTTCCATATTTTTGTGACCTCCGTGTGTTTCATTTGTGGATGCTTTATTTATTTATTTTGC
ATCACATCATATCATCATGCCATCATGTCTTTTAATTTTTTAAAGCTCAACTAAATAAATGGCATAGATCTTTTGATCTA
TTTAAATCGAGGGAATT-CACATGGT-GATTTATCTTTATAACATATCCTCCTA-------ATAATTATGGAGCTAT---
---TAT-AAATATTCCAATAATTTGGAATCACCCATAAACACACTTGCAAATATTCCC--CATGCCTTTTGTACTTCGAG
TTTAACCTTCAAATCTTGTCTGCAATTCTTATCACTTTTATCAAGGTTCCTCCA--------------------------
-----------ATAATCCTCATCAT-TTTTGGTCTCTTCTAAATATT-GTCCTAGTTCAAACCATTCAAATTTAAATTCA
AATGAGTTTGAATTCAAATCTCGCAATCTTG------------------------TGCACATTTTTGTGAGTCCGGAAAA
ATTATC-GCGTGTCCAACTTCTTCCCCTAACCTCCCTTTCTTTTCTTTATATCTATATGTTATGTTTTTATTTA-T---C
CTTCTTTAGAGTGGGGGGGAGAGAGAAGAGAGACCAGCAGTCAGTCCAGCCCAGCTGGGCCTCCCAGCAG-CCATCCCTC
CCTGCAGTCCTCTAGGCCAGCTCAGTCCCGGACCCTCTAGGCCCACCTAAACCTAGCTAACCCTAGCCCCGACCCCCTCA
CCCCCCGATCCCATCTCACTCCCTCGTCTCCCACCTCACGCCGCCAGGGAGGATCCCGATCCCCATCGCCGTACGCTCGA
CCCCCTCCTCCCTCTCGATCTCTCACACCCGCAGCCACCTCTTGCCCGCTCCGGCCACCTTCCGCCACTAGCAAGCTCCA
GCCAGCGAGCCATGCCTGCGCCTCCTTGCCCCATGCCGGCTAGCGTGCCACCCGGCGAGCCCTTCCCTGGTGCCTCCCTC
GATCCGCGAGGACCCTCTATCGCTGCCCCCGACTTCGCTCTCCAGCCAT---GGCGCCCGTGCCGGCGACCACCTACAGC
CCGCTGCTCCGAGCCGTCTCTTTAGCGCAGAGCACAGCCCTCCGCGCCCCCTTCGTCGTCCGTCTCTGCTGGCGACCTCC
ACCACCATGCGCCGCGCGCCCAACCTCCAGCTCACGCCTGTGTCCCTCCAGCATCGATGAGGACCACCTCCGACCTCCAC
GTCCTCTGCTTCACCTCCTCGCGCCCGTGCTCCTCCCGTTGTTTGGTCTTCCTTACCCACCTATCAGGGACGCCATGGCT
GCCGCCCCATGGAGTTTCATCGGCCCATATCTGGCCGGGAACCAAACGAGCCCCGTGCCTGCTGCTGCCGCTGTTTTTCC
CTCTGTCAAACGAATGAACACCTTCCCCGGAGACTGCCAAGACCGTTCAGGATTCGCCAAGTACCGGTTCGAGTACGACT
ATCGCTGATACCCCGAGGACACCAAGTGTACGAATACACCCGGCGATACCCCAAGGCACCATGGACGT-AAGTTCCTCGC
CATGTACA-------TCGACGTGTACGACTACTATGTGAACGTGTACTCGACGACCCCGGAAACC--TATGTTGTGCCAA
GTACCGCC--TCGTTGACCCGAACATGTACAGGAAAATGTGTACCACTACCATCGGAGACTGATAGTACAACTACTTCCA
CTACCGTCGTG-G-AACGACTACTTCCTCTACTTCCCT--CGACAAACTCGAACCGCCCCAGAAATGCACACTTCAAAGG
TATAACGTCAAGACGAC-GCCCGTGGACCGTATGCTTGT-GATGTGTTGTATGAGATGT--CTGTGTTTGCACCATGTCC
AAATTGATCCTTGTACGTTCCTTG---TTTCCTTGTCGTCGTCTCGTGGGAACCCGGCATCTGGGATCACCCCACCATCC
TTGCTTGACACGGTCCCACCACACTACCTTTTGCACCGGTATCTCCGT-GAACTACCGGAACCGATATGTTGTCGTGGCA
TCATTTTCGGATTCATCGCCGTGGCACCCT-TTC--TATCCACCACGGTGACAAA-TGC-TTCATAATATGCTCATGTCA
ACATTTTT---GTAAAATTGCA--TA-AACTTGGATATGCCATCCGCATCATGATAACAACATTTAAAATTGTTAAAATT
GTTGTTTACTTCAA--TTACTAAATGACATGTGGGGATTTACCGGAATGGTTATTTGTTGTTTCCCGCCTCACTTAAAAT
TTCCTAAAATGTGTAGTTTACTTTTGCCTCACCTCTTTCCATGTTTAAGAACATTTAATGTTGTTGGGTACA-TAACCAG
GAGTGAACTAAAGAATCGAATGTTGTGTTTCGTCAATATGCAACTTGTTGCATATTGAGCTCCACTTAATTTGTAGTATT
ATTTG-TTGCACTTTGCCATGCCTTGCCTCTTTAAAGCGGACATGCAACATACTTGATTGTGCATGATGCCATGTTTATG
CTTGTGT-
>chr4A_1
AGACCGATGCTCCAGAAGACTTCCATATATTCGTGACCTCTGAGTGTTTCATTTGTGCTTGCTCCATTTATG---TTTGC
ATTGCATCATGTCATCATGCCTGCATGTCATTTAA--TTTTAAAACTCAACTAAATAAATTGTATGGGTCTT-CGATCCA
TTTAAATCAAGGGAAATTCACATGGTGAAATTCTCTTTATAACATCAAAAATTCTCCTACTATTAATAGGGACCTAT---
---TATCAAATATTCCATTTTTTTGGAATCACCCATAAACACACTTGCAAATATTCCC--CATGCCTTTTCTACTTTGAG
TTTGACCTTCAAATCTTATCCACAATTCTTATCACTTTTATTGAGGTTCCTCCA--------------------------
-----------ATAATCCTCATCAT-TTTTGGGCTCTTCTAAATATT-GTCCTAGTTCAAATCATTCAAATTTAAATTCA
AATGAGTTTGAATTTAAATCTTGCAATCTTGGCTACTCCTATTTTTCATGGAACGTGCACATTTTTGTGTGTCCGTAAAA
ATTATCCGTGTGTCCAACTTCTTCCCCTAACCTCCCTTTCTTTTCTTTCTTATC-TGTGTGCTGTTTTTATTTA-T---T
TTTCTTTAGAGTGA----GAGAGAGAAGAGTGCCCAGCAGCCAGTCTAGCCCAACTGGGCCTCTCAGCGGCCCATCCCTC
CCAGCAGTTCTCTAGGCTCAGC----------------------------------------------------------
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>chr4A_1
AGACCGACGCTTCAGAAGACTTCCATTTTTTCGTGACCTCCGTATGTTTCATTTGTGCTTGCTCTATTTATT--TTTTGC
ATTGCATCATGCCATCATGCCAGCATGTCTTTTAA-TTTTTAAAACTCAGCTAAATAAATTGCATAGATCTTTTGATCTA
TTTAAATCGAGGGAATT-CACATGGT-GATTTCTCTTTATAACATATCCTCCTA-------ATAATAATGGAGCTAT---
---TAT-AAATATTCCATTTGTTTGGAGTTAACTAG-AACACACTTGCAAAATAAATCCCAT------------------
--------------------TGCCTTTGTTATCACAATTCTTGATCTCTAACTTTGCCATATGTCTTTTCATCACTTTCC
GGAGCTCCATCAAAAATCTCAACAT-TTTTGGACCTTCCTTTTACCAAGTCCTAGTTCAAACCCATTTGAATTAAATTCA
AAGTAGTTT-AATTTAATTCCTAAAATCTTGGCCACTCGTATTTTTCATGGACCGTGCACATTTTTGTGAGTTCGGAAAA
ATTATCCGCGTGTCCAACTCCTTCCCCTAACCTCCCTTTCTTTTCTTTCTTATC-TATGTGATGTATTTATTTA-TTTAT
TTTCTTTAGAGTGA----GGGAGAGAAGAGAGTCCAGTAGCCAGTCCAGCCTAGCAGGGCCTCCC---------------
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>chr4A_1
AGACCGACGCTTCAGAAGACTTCCATTTTTTCGAGACCTCCGTGTGTTTCATTTGTGCTTGCTCTTTTTATT--T----C
ATTGCATCATGGCATCTTGTCGGCATGTCTTTTAA-TTTTTAAAACTCAACTAAATAAATTGCATAGATCTTTTGATCTA
TTTAAATCAAGGGAATT-CACATGGT-GATTTATCTTTATAACATATCATCCTA-------ATAATTATGGAGCTAT---
---TAT-AAATATTCCATTTGTTTGGAATTAACCGG-AACTCACTTGCAAAATAAATCCCAA------------------
--------------------TGCCTTTGTTATCACAATTCTTGGTCTCTAACTTTGCCATATATCTTTTCATCACTTTCC
GGAGCTCCATCAAAAATCTCAACAT-TTTTGGACCTTCCTTTTACCAAGTCCTAGTTCAAACCCATTTGAATTAAATTCA
AATTAGTTTGAATTTAATTCATGCAATCTTGGCCACTCGTATTTTTCATCGACCGTGCATATTTTTGTGAGTCCGGAAAA
ATTATCCGCGTGTCCAACTCCTTCCCCTAACCTCCCTTTCTTTTCTTTCTTATC-TATGTGATCTTTTTATTTA-T---T
TTTCTTTAGAGTGA----GGGAGAGAAGAGAGACCAGCAGCCAGTCCAACCCAGATGGGCCTCCC---------------
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>chr6A_1
AGACCGACGCTCCAGAAGACTTCCATATTTTCGTGACCTCCGTGTGTTTCATTTGTGCTTGCTCTATTTATT--TTT-GC
ATTGCATCATGTCATCATGCCAGCATGTCATTTAA-TTT-TAAAACTCAACTAAATAAATTGTATGGGTCTT-CGATACA
TTTAAATCGAGGGAAATTCACATGGTGAAATTCTCTTTATAACATATAAAAGTCTCCTACTATTAATAGGGAGCTAT---
---TATCAAATATTCCAT-TTTTTTGAATCACCCATAAACACACTTGCAAATATTCCC--CATGCCTTTCCTACTTCGAG
TTTGACCTTCAAATCTTGTCCGCAATTCTTATCACTTTTATCGAGGTTCCTCCA--------------------------
-----------ATAATCCTCATCAT-TTTTGGGCTCTTCTAAATATT-GTCCTAGTTCAAAATATTCGGATTTAAATTCA
AATGAGTTTGAATTTAAATCTTGCAATCTTGGCCACTCCTATTTTTCATGGACCGTGCACATTTTTGTGAGTCCGGAAAA
ATTATCCGCGTGTCCAACTTCTTCCCCTAACCTCCCTTTCCTTTCTTTCTTATC-TATGTGATGTTTTTATTTA-T---T
TTTCTTTAGAGTGA----GAGAGAGAAGAGTGACCAACAGCCAGTCCAGCCCAGCTCGGCCTCCCAGCGGCCCATCCCTC
CCTGCGGTCCTCTAGGCCCAGC----------------------------------------------------------
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>chr4A_4
---CCGACGCTCTAGAAGACTTCCATATTTTCGTGACCTCCGTGTGTTTCATTTGTGCTTGCTCGATTTATT--TTT-GC
ATTGCATCATGTCATCATGCCAGCATGTCATTTAA-TTT-TAAAAATCAACTAAATAAATTGTATGGGTCTT-CGATCCA
TTTAAATCAAGGGAAATTCACATGATGAAATTCTATTTATAACATATAAAAGTCTCCTACTATTAATAGGGAGCTAT---
---TATCAAATATTCCA--TTTTTTGAATCACCCATAAACACACTTGCAAATATTCCC--CATGCCTTTTCCACTTCGAG
TTTGGCCTTCAAATCTTGTCCGCAATTCTTATCACTTTTATCGAGGTTCCCCCA--------------------------
-----------ATAATCCTCATCAT-TTTTGGGATCTTGTAAATATT-GTCCTAGTTCAAACCATTCGAATTTAAATTCA
AATGAGTTTGAATTTAAATCTTGCAATCTTGGCCACTCCTATTTTTCATGGACCGCGCACATTTTTGTGAGTCTGGAAAA
ATTATCCGCGTGTCCAACTTCTTGCCCTAACCTCCGTTTCTTTTCTTTCTTATC-TATCTGTTGTTTTTATTTA-T---T
TTTCTTTAGAGTGA----GAGAGAAAAGAGTGCCCAGCAGTCAGTCCAGCCCAGCTGGGCCTCCCAGCGGCCCATCCCTC
CCCGTAGTCCTCTAGCCCCAGC----------------------------------------------------------
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>chr1A_78
-----------------------------------------------------------------------------TGC
ATTGCATCATGTCATCATGCCATCTTTTTCTCAAACTAACTAAAACTCACTTAAATCAATTGCATATATCTTTCGACCTA
TTTAAACTGAGGGAATT-CACATGGT-GAGTTCTCTTTATAACATATCCTCCCA-------GTATTTAGGGAGCTAC---
---TAT-GAATATTCCATTAGTTCGAAATTAACCGCAAACACACTTGCAATTTAAACTCTCATGTCTTTTGTGCTTCGAG
TTTGACCTTTAAATCTTGTCCACAATTCCTATCACTTTTATCAAGGTTCCTCCA--------------------------
-----------ATAATCCTCATCATGTTTTGGGCTCTTCTAAATATT-GTCCTAGTTCAAACCATTCAAATTTAAATTCA
AATGAGTTTGGATTTAAATCTTGAAAACTTGGCCACTCCTACTTTTCATGGACCTTGCATATTTTTGTGAGTCCGGAAAT
ATTATCCGCGTGTCCAACTTCTTCCCCTAACCTCCCTTTCTTTTCTTTCTTATC-AATGTGTTGTTTTTATTTATT---T
TTTCTTTAGAGTGA----GAGAGAGAAGAGAGCCCAGCAGCCAGTCCAACCCAGCTAGGCCTCTCAGCGGCC-ATCCCTC
CCCGCGGTCCTCCAGGCCGGCCCAGTCCCCGGCCCTCTAGGCCCACCTAAACCTAGCGAACCCTATCCCCAACCCCCTCA
CCCCACAATCCCATCTCACTCCCTCGTCTCGCACCTCACGACGCCAGGGAGGAGCCCGATCCCCATCCCCATCCGCTCGA
CCCCCTCCTCCCTCTCGATCTCCCACGCCCGCAGCCACCTCTTGCCCGCTCCGGCCACCCTCCGCCGCTAGCAAGCTCCA
GCCAGCGAGCCACACCTGCGCCTCCTTGCCCTGCGCCGGCCAGCGTGCCGCCCGGTGAGCCCTTCCCTGGTGCCTCCCTC
GATCTGCGATGACCCTCTGTCGCTGCCCCCTACTTCGGTCTCCGGCCATGGCGGCGCTCGTGCCGGCGACCACTTGCAGG
CCGCTGCTCCGAGCCACCTCTTTAGCGCCGAGAACAGCCCTCTACGCCCCTCT-GTCGTCCATCTCTATCGGCGACCTCC
ACCACCATGCGCCGCGCGCCCAACCTCCCGCTCGCGCCTGCGTCCCTC---CATCGACGAGGACCACCTCCGGCCTCCAC
GTCCTCTACTTCGCCTCCTTACGCCTGTGCACCTCTGGTTGCTT------------------------------------
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>chr6A_78
-----------------------------------------------------------------------------TGC
ATTGCATCATGTCATCATGCCATCTTTTTCTCAAACTAACTAAAACTCACTTAAATAAATTGCATAGATCTTTCAATCTA
TTTAAACCAAGGGAAAT-CACATGGT-GAGTTCTCTTTATAACATATCCTCCCA-------GTATTTAGGGAGCTAC---
---TAT-------TCCATTAGTTTGGAATTAACCGCAAACACACTTGCAATTTAAACTCTCATGTATTTTCTGCTTCGAG
TTTGACCTTCAAATCTTGTCCGCAATTCTTATCACTTTTATCGAGGTTCCTCCA--------------------------
-----------ATAATCCTCATCAT-TATGGGGCTCTTCTAAATATT-GTCCTAGTTCAAACCTTTCGAATTTAAATTCA
AATGAGTTTGAATTTAAATCTCGCAATCTTGGCCACTCCTATTTTTCATGGACCATGCACATTTTTGTGAGTCCAGAAAA
ATTATCCGCGTGTCCAACTTCTTCCCCTAACCTCCCTTTCTTTTCTTTCTTATC-TTTGTGTTGTTTTTATTTA-T---T
TTTCTTTAGAGTGA----GAGAGAGAAAAGAGCCCAGCAGCCAGTCCAGCCTAGTTGGGCCTCTCAGCGGCC-ATCCCTC
CACACAGCCCTCCAGGCCGGCCCAGTCCCCGGCCCTCTAGGCCCACCTAAACCTACCTAACCCTAGCCCAGGCCCCGTCA
CCCCACGATCCCATCTCACTCCCTCGTCTCCCACCTCACGCCGCCAGGGAGGAGCCCGATCCCCATCCCCATCCGCTCGA
CCCCCTCCTCCCTCTCGATCTCCCACGTCCGCAGCCACCTCTTGCCCACTCCGGCCATCCTCTACCGCTAGCAAGCTCCA
GCCAGCGAGCCACGCCTGCGCCCCCTTACCCCGCGCCGGCCAGCGTGCCACCCGGCGAGCCCTTCCCCGGTGCCTCCCTC
GATCCGCGATGACCCTCTATCGCTGCCCCCGACTTCGGTCTCCGGCCATGGCG---CCCGCGCCACCGACCACCTGCAGG
CTGCTGCTCTGAGCCGCCTCCTTAGCGCCGAGCACAGCCCTTCGCGCCCCTCCA-TCGTCTGTCTCTGCCGGCGACCTCC
ACCACCATGCGCCGCGCGCCCAACCTCCCGCTCGCGCCTGCGTCCCTCCATCATCGACGAGGACCACCTCCGGCCTCCAC
GTCCTCTGTTGCGCCTCCTCGTGTCTGTGCACCTC---------------------------------------------
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>chr1A_85
--------------------------------------------------------------------------------
----CATCATGTCATCATGCCATCTTTTTCTCAAACTAACTAAAACTCACTTAAATAAATTGCATAGATCTTTCGATCTA
TTTAAACCGAGGGAATT-CACACGGT-AAGTTCTCTTTATAACATATCCTCCCA-------GTATTTAGGGAGCTACTAT
AAATAT-------TCCATTAGTTTGGAATTAACCGCAAACACACTTGCAA--TAAACTCTCATGTCTTTTTTGCTTTGAG
TTTGACCTTCCAATCTTGTCCGCAATTCTTATCGCTTTTATCGAGGTTCCTCCA--------------------------
-----------ATAATCATCACCAT-TTTTGGGCTCTTCTAAATATT-GTCCTAGTTCAAACCACTCGAATTTAAATTCA
AATGAGTTTGAATTTAAATCTCGCAATCTTGGCCACTCCTATTTTTCATGGACCGTGCACATTTTTGTGAGTCCGGAAAA
ATTATCAGCGTGTCCAACTTCTTCCCCTAACCTCCCTTTCTTTTCTTTCTTATC-TATGTGTTGTTTTTATTTA-T---T
TTTCTTTAGAGTGA----GAGAGAGAAGAGAGCCCAGTAGCCAGTCCAGCCCAGCTGGGCCTCTCAGCATCC-ATCCCTG
CCCGCAGTCCTCCAGGCCAGCCCAGTCCCCGGCCCTCTAGGCCCACATAAACCTAGCTAACCCTAGCCCCGACACCCTCA
CCCTACGATCCCATCTCACTCCCTCGTCTCCCACCTCACGCCGCCAGGGAGGAGCTTGATCCCCATCCCCATCCGCTCGA
CCCCCTCCTCCCTCTCGATCTCCCACGCCCGCAGCCACCTCTTGCCCGCTCCGGCCACCCTCCGCCGCTACCAAGATCTA
GCCAGCGAACCACGCCTGCGCCTCCTTGCCCCGCGCTGGCCAGCGTGCCGCCCGGCGAGACCTTCCCCGGTGCCTCCCTC
GATTCGTGATGACCCTCTGTCACTGCCCCCGACTTTGGTCTCTGGCCAT---GGCGCTTGCGCCGGCGACCACCTGCAGG
CCGCTGCTCCAAACCGCCTCTGTAGCGCCGGGCACAGCCCTCCGGGCCCCTCCA-TCGTCCATCTCTACGGGTGACCTCC
ATCACCATTCGACGCACGCCCAACCTCCCGCTCGCGCCTGCGTCCCTCCATCATCGACGAGGACCACCTCCGGCCTCCAC
GTCCTCTCCTTCGCCTCCTCGCGCCCGTGCACCTCTGGTTG---------------------------------------
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>chr7A_1478
ACCCTCG-------------------------------------------------------------------------
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----------------------------------------------------AAGGCACCGTGGACGTCAAGTTCCTCAC
CATGTACCACTACCGTCGACGTGTACGACTACTATGTGAACGTGTACCCGATGACCCCGGAGACC--TATGTTGCGCCAA
GTACCCCC--TCGTTGACCCAAATATCTACGGGAAAACATGTACCACTACTGTTGAAGACCGATAGTACCACTACTTCTA
CTACCGTTGCG-G-AACGTCTACTTCCTCTACTTCCCT--AGTCGAACTCGAACCGCCGCGGAAATGCATGCTTCAAAGG
TATAACGTCGAGACGAC-GCCCGTGGACCATATGCTTGT-GATGTGTTGTATGAGATGT--CCGTGTTTGCACCATGTAC
GAATTGATACTTGTACGTTCCTCG---TTTCCTTTTCGTCGTCTCGTGGGAACCCGACATCC-GGATCACCCCACCATCC
TTGCTTGACATGCTCCCGCCACACTACCTTTTGCACCGGTATCTCCGT-GAGCTTCCGGAACGGATATGGTGCCGTGGCA
TCATTTTTGGATTCATCGCCGTGGCACCCT-TTC--TTTCCACCACGGTGACAAA-TGC-TTCATAATATTCTCATGTCA
ACATTTTC---ATAAAATTGCA--TA-AACTTGCATATGCCATCCGCATCTTGATAACAACATTTAAAATGGTTAAAATG
GTTGTTTGCTTCAA--TTCCTAAATGACATGTGGGGATTTACCAGAATGGTTATTTGTTGTTTCCGGCCTCACTTAAAAT
TTCCTAAAATGTGTAGTTTA-TTTTACCTCACATCTTGCCATGTTTAATAACATTTAATATTGTTGGGTACA-TAACCGG
GAGTGACCTAAATAATCGAAAGTGGTGTTTCCTCAATATGCAACTTGTTGCATATTGAGCTCCACTTAATTTGTAGTATT
GTTTGTT-GCACTTTGCCATGCCATGCCTCATTAAACCGGACATGCATCATACTTGGTTGTGCATCATGCCATGTTACTG
CTTGT---
>chr7A_1478
ACCCTCG-------------------------------------------------------------------------
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----------------------------------------------------AAGCCTCCGTGGACGTCAAATTCCTCGC
CATGCACCACTATCGTCGACGTGTACGACTACTATGTGAACGTGTACCCGATGACCTCGGAGACC--TATGTTGCGCCAA
GTACTCCTA-TCGTTGACCCGGACATCTACAGGAAAACGTGTACCACTACCGTCGAAGACCGATAGTACCACTACTTTGA
CTACCGTCGTG-G-AATGACTACTTCCTCTACTTCCCT--CATCGAACCCTAACCGTCCCG--AACGCACGCTTCGAAGG
TATAACCATCGGAACGACGCTTGTGGACGAA-----TGT-TGTGTGATGTATGAGATGA--TCGTGGTTGCACTGTGTCC
GAGTTTTTCTTTGTGAATTCCTCA---TTGCCATGCCGTCGATATGTGGGAACCCAGTAACCGGGAGCACCCCAATGTTC
AT-CATGACTCGCTCCCGTCACATTTCCTTTTGCACCAGTATCTCCAT-GAGCTACCGGAACCTACATGTTGCCGTGGCA
TCATTTTCGGATTCGTTGATGTGGCACCCC-TTTCGTTTCCGCCACGATGACAAAATGC-TTCATATCATGCTCCTGTCA
ACATTTCC---AA----ATTGCATAA-AACTTGCACATGTCATCCGCATCATGATAACAAC-TTTAAAATGTTTAAAATT
GTTGTTGCATTAAA--TTGCTAA-TG-CACATGAGGATTTACCGGAATTGTTGTTTGATGTTTCCGGCCTCATTTAAAAT
ACCT--AACTGTGTATTTTACTCAGGTTTCACCTCTTGCCATGTTAG-GAACATTTAATTTTGTTGGGTACA-TAACCGG
GGGTGAACTAAATAATCGAATGTGGTGTTTTGTCAATATGCAACTCATTGCATATTGAGCTCCACTTAATTTGTAGTATT
GTTTGTT-GCACTTTGCCATGCCATGCCTCTTTAAACCGGACATGCATCATACTTGATTGTGCATCATGTCATGATTATG
CTGTGTGT
>chr2A_1492
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-------------------------------------------------------------TGGACGTCAAGTTCCTCGC
CATGTACCACTACCGTCGACGTGTACGACTACTATGTGAACGTGTACCCGACGACCCCGGAGACC--TATGTTGCGCCAA
GTACCCCCCCTCGTTGACCCAGACATCTATAGGAAAACGTGTACCACTACCGTCGAAGACCGACAATACCACTACTTCCA
CTACCGTCATG-G-AATGACTACTTCCTCTACTTCCCT--CGTCGAACCCGAACCGTCCCG--AACGCACGCTTCGAAGC
TATAACCACCGGAACGACGCCCGTGGATGAA-----TGT-TGTGTGAAGTATGAGATGA--CCGTGGTTGCCCCGTGTCT
GAGTTGTTCTTTGTGAATTCCTCG---TTGCCTTGCCGTCGACATGTGGGAACCCAGTAACCGGGAGCACCCCAACATTC
AT-CATGACTCGCTCCCGTCACATTTCCTTTTGCCCCGGTATCTAAATCGAGTTACCGGAACCGGAATGTTGCCGTGGCA
TCATTTTCGGATTGGTTGCCATGGCACCCCTTTTCGTTTCCACCACGGTGACAAA-TGC-TTCATAATATGCTCATGTCA
ACTTTTAACAAAA----ATTGCATAA-AAGTTGCACATGTCATCCGCATCATGATAACAACATTTAAAATGGTTAAAATT
GTTGTTTGCTTAAAGATTGCTAAATGACATGTGGGGATTTACCGGATT--TTTTTTCTTGTTTCCGACCTCACTTAAACT
TGCTGTGATAGT-TAATTTAGTTAGGCTTCACCTCTTGCCATGTTTAATAAGATTTAATATTGTGGAGTAGTTTAAACGA
GAGAGAACTTAATAATTG-ATGTGGTGTTTCATCAATACGCAACTCGTTGCATAATGAGCTCCACTTGATTTGTAGTATT
GTTTGT--GCACTTTGCCATGCCATGCCTCATTAAACTGGACATGCATCATACTTGATTGTGCATCATGCCATGTTTATG
CTTGT---
>chr4A_1518
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---------------TCGACGTGTACGACTGCTTTGTGAACGTGTACCCGACGACCCTGGAGACC--TTTCTTGCGCCAA
GTACCCCC--TCGCTGACCCAAACATCTACAGGAAAACGTGTACCACTACCGTCAAGGACCGATAGTACCACTACTTCTA
CAACCTTCGCG-A-AACGACTACTTCCTCTACTTCCCT--CGACGAACGCGAACCGCCCCGGAAATGCACGCTTCCAAGG
TATAACCCTGAGACGAC-ACCATGGACCGTA-----TGCATGTGTGTTGTACGAGATGC--TCATGTTTGCACCGTGTCC
GAGATGTCCTTG--CGTTCCTCCTTGTTTGCCACGCTGTCAATCCGTGGGAACCCGGTATCCGGGATCACCCCACCGTCC
TTGCATGACATGCTCTCGTCACATTTCCTTTTGCACTGGTATCTCCAT-GAGCTACCAGAACCGATATGTTGCCGTGGCA
TCATTCTCGGATTTGTTGTCGTGGCACCCC-TTTCGTTTCTGCCACGATGACAAA-TGC-TTCATAACATGCTCTTATCA
AAATTTTC---ATAAATATTGCATAA-AATTTCCAAATGTCATCCGCATCATGATAACAACATCAAGAATGTTT-AAATT
GTTGTTTGCTTCAA--TTGCTAAATGACATGTGTGGATTTCCTGGAATGGTTATTTGTTGTTTCCGGCCTCACTTAAAAT
TTCCTAAAATGTGTAGTTTACTTTTGCCTCACCTCTTGCCATGTTTAATAACATTTAATATTGTTGGGTACA-TAACCGG
GAGTGAACTGAATAATCGAATGTGGTGTTTCCTCAATATGCAGCTCGTTGCATATTGAGCTCCACTTAATTTGTAGTGTT
GTTTG-TTGCACTTGGCCATGCCATGAATCATTAAACCGTACATGCATCATCCTTGGTTGTGCATCATGCCATGTTTATG
CTCGTGT-
>chr4A_1518
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---------------TCGACGTGTACGACTACTTCGTGA-CGTGTACCCGACGACCCCGGAGACC---ATGTTGCACCAA
GTACCCCC--TCGTTAATCCGAACATCTACAGGAAAACATGTACCACTACCATCGATGACCGATAATACCACTACTTCAA
CTACCGTCACG-AGAACGTCTACTTCCACCACTTCCA---CTACGAACTCGTTCCGCTCCGGAATTGCATGCTTCGAAGG
TATAACCCCGAGACGACCGTCTGTGTATGAA-----TGC--ATGTGATGTTTGAGAGGA--TCATGGTTGCACCGTGTCC
GAGTTGTTCTTTGCGAGTTCCTCG---TTGCCTTGCCGTCGACATGTGGGAACCCGGTATTCGGGAGCACCCCACCATCC
TTGCATGACACGCTCCCGCCACACTTCC-TTTGCACCGGTATCTCTAT-GAGCTACCGGAACCGATATGTTGCCATGGCA
TCATTTTCGGATTCGTTGTCGTGGCACCCC-TTTCGTTTCCGCCACGATGACAAA-TGC-T-CATAACATGCTCATGCCA
ATATTTTC---TTAAAATTGCA--TA-AACTTGCATATATCATCTGCATCATGATAACAATATTTAAAATGTTTAAAATT
GTTGTTGCATTAAA--TTGCTAAATG-CATATGGGGATTTACTGGAATTGTTGTTTGATGTTTCCGGCCTCATTTAAAAT
GCCT--AACTGTGTAGTTTACTCATGTTTCACCTCTTGCCATGTTAACCAACATTTAATA-TGTTGAGTACA-TAACCGA
GAGAGAACTAAATAATTG-ATGTGGTGTTTCGTCAATATGCAACTCGTCGCATATTGAGCTCCACTTAATTTGTAGTATT
GTTTGTT-GCACTTTGCTATGCCATGCCACATTAAACCGGACATGCATCATACTTGGTTGTGCATCATGCCATGTTTATG
--------
>chr7A_1518
--------------------------------------------------------------------------------
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---------------TCGACGTGTACGACTACTTCGTGA-CGTGTACCCGACGACCCCGGAGACC---ATGTTGCACCAA
GTACCCCC--TCGTTAACCCGAACATCTACAAGAAAACGTGTACCACTACCGTCGAGGACCGATAGTACA-CTACTTCAA
CTACCGTCACGAG-AACGTCAACTTCCACCACTTCCA---CTACGAACTCGTTCCACTCTGGAATGGCATGCTTCGAAGG
TATAACTCCGAGACGGCCATCCGTGTACGAA-----TGC--ATGTGATGTTTGAGAGGA--TCGTAGTTGCACCGTGTCC
GAGTTGTTCTTTGCGGGTTCCTCG---TTGCCTTGCCGTCGACATGTGGGAACCCGGTATTTGGGAGCACCCCACCATCC
TTGCATGACACGCTCCCGCCACACTTCC-TTTGCACCGATATCTCTAT-GAGCTACCGGAACCGATATGTTGCCGTGGCA
TCATTTTCGGATTCGTTGTCGTGGCACTCC-TTTCATTTCCGCCACGATGACAAA-TGC-T-CATAACATTCTCATGCCA
ATATTTTC---TTAAAATTGCA--AA-AACTTGCATATATCATCTGCATCATGATAACAACATTTAAAATGTTTAAAATT
GTTGTTGCATTAAA--TTGCTAAATG-CATATGGGGATTTACCGGAATTATTGTTTGATGTTTCCGGCCTCATTTAAAAT
GCCT--AACTGTGTATTCTACTCATGTTTCACCTCTTGCTATGCTTAACAACATTTAATATTGTTGGGTACA-TAAACGG
GAGAGAACTAAATAATTG-ATGCGGTGTTTCATCAATATGCAACTTGTTGCATATTGAGCTCCACTTAACTTTTAGTTTT
GCTTG-T-GCACTTTTCCATGCCATGCCTCATTAAACTGGACATGCATCATACTTGGTTGTGCATCATGCCATGTTTATG
--------
>chr5A_1518
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---------------TCAACGTGTACGACTACTTTGTGAACGTATATCCGACGACCCCAGAGACC--TATGTTGCGCCAA
GTACCCC---TCGTTGACCCGAACATCTATAGGAAAACATGTACCACTACTGTCGAGGACTGATAGTACCACTACTTCTA
CTACCGTCGCG-G-AACGACTACTTCCTCTACTTCCCT--CGACGAACTTGAACCGCCCCGGAAATGCACGCTTCGAAGG
TATAACCACGAGACGAC-GCCGTGGACCGTA-----TGCATGTGTGTTGTATGAGATGC--TCGTGTTTGCACCGTGTCC
GAGATGTCCTTGGACGTTCCTCCTCGTTTGTCATGCTGTCGATCCGTGGGAACC-GGCATCCGGGATCACCCCACCATCC
CTGCATGACACGCTCCCGTCATATTTCCTTTTGCACTGGTATCTCCAT-GAGCTATCGGAACCGATATGTTGTCGTGGCA
TTATTTTTGGATTCGTTGACGTGGCACCCC-TTTCGTTTCCGCCACGATGAAAAA-TGC-TTCGTAACATGCTTTTATCA
ACATTTTC---ATAAATATTGCATAG-AACTTGCAAATGTCATCCGCATCATAATAACAACATCAAGAATGATT-AAATT
GTTGTTTGCTTCAA--TTGCTAAATGACGTGTGGGGATTTACCGGAATGGTTATTTGTTGTTTCTGGCCTCACTTAAAAT
TGCCTAAAATGTGTAGTTTACTTTTGCCTCATCTTTTGCCATGTTTAATAACATTTAAAATTGTTGGGTACA-TAACCGG
GAGTGAACTAAACAATCGAATGTGGTATTTCATCAATATGCAACTCGTTGTATATTGAGCTCCACTTAATTTGTAATGTT
GTTTGTT-GCACTTTGCCATGCCATGAATCATTAAACCAGACATGCA---------------------------------
--------
>chr6A_1519
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----------------CGACGTGTACGACTACTTCGTGAACGTGTACCCGACGACCCTGGAGACC---ATGTTGCGCCAA
GTACCCCC--TCGTTAACCCGAACATCTACAGGAAAACGTGTACCACTACCGTCAAGGACCGATAGTACCACTACTTTAA
CTACCGTCGCG-AGAACGTCTACTTCCACCACTTCCA---CTACGAACTCGTTCCGCTCCGGAACTGCATGCTTCGAAGG
TATAACCCCGACACGAC-GCTCGTGAACAAA-----TGAATGCATGTTGTATGAGATGCACCCTTGTTCGCCTCGAGTCC
GAATTGTCAGTGCACGTTGCCTCTCTTTTACCTTGTCACCGACATGTGGGAACCCGGTATCTGGGAGCACCCCACCATCC
TTCCATGACACGCTCCCGCCACACTTCC-TTTGCACCGGTATCTCTAT-GAGCTACCGGAACCGATATGTTGTCGTGGCA
TCATTTTCGGATTCGTTGCTGTGGCACCCC-TTTCATTTCCGCCACGATGACAAA-TGC-T-CATAACATGCTCATGCCA
ATATTTTC---TTAAAATTGCA--TA-AACTTGCATATATCATCTGCATCATGATAACAACACTAAAAATGTTTACAATT
GTTGTTGCATTAAA--TTGCTAAATG-CATATGGGGATTTACCGGAATTGTTGTTTGATGTTTCCGGCCTCATTTAAAAT
GTCT--AACTGTGTAGTTTACTCATGTTTCACCTCTTGCCATGTTAGCCAACATTTAATATTGTTGAGTACC-TAACCGG
GAGTGAACTAAATAATTG-ATGTGGTGTTTCGTCAATATGCAACTCGTTGCCTATTGAGCTCCACTTCATTTGTAGTATT
GTTTGT--GCACTTTGCCATGCCATGCCTCATTAAAACGGACATGCATCATACTTGTTTGCGCATCATGCCATGTCTATG
--------
>chr5A_1519
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----------------CGACGTGTACGACTACTTTGTGAACATGTACCCGATGACCCCGGAGACCTATATGTTGCACCAA
GTACCCCC--TCGTTGACCCGAACTTCTACAGGAAAGCGTGTACCACTACCGTCGAGGACCGATAGTACCACTACTTCTA
CTACCGTCGCG-G-AACTACTACTTCCTCTACTTCCCTTGCATCGAACCCGATCCGCTCTGAAAGCGCACGCTTCGAAGG
TATAACCACCGAGACGATGCCCGTGAACGAA-----TGC--ATGTGATGTATGAGATGC--TCGTGGTTGCACCGTGTCC
GAGTTGTTCTTTGCGAGTTCCTCG---TTGCCTTGCCGTCGACATGTGGGAACCCAGTATCCGGGAGCACCCCATCATC-
TTACATGACACACTCACACCCACTTCTATTTTGTGTCGGTATCTCAATCGAGTTACCGGAACCGATATGTTGTCGTGGCA
TCATTTTCGGGTTCGTTTCCGTGGCACCCT-TTC--TTTCCACCACGGTGACAAA-TGTTT-CATATCATCTTCATGTCA
ACTTTTTC---ATAAAATTGCA--TCCAACTTGAATATGTCATCCGCATCATGACAACAACATCAAGAATGTTT-AAATT
GTTGTTTGCATCAT--TTGCTAAATG-CATATGGGGATTTAACGGAATTGTTGTTTGATGTTTCCGGCCTCATTTAAAAT
GCCT--AACTGTGTATTTTACTCATGTTTCACCTCTTGCCATGTTTAATAACATTTAATATTGTTGGGTACA-TAAACAA
GAGCGAACTAAATAATTG-ATGTGGTGTTTCATCAATATGCAACTTGTTGCATATTGAGCTCCACTTAATTTGTAGTATT
GTTTGT--GCACTTT-CCATGCCATGCCTCATTAAACCGGACATGCATCATACATGGTTGCGCGTCATGCCATGTTTATG
--------
>SNPs
---------S---------------------S-------------------------SS----S--------SS------
--SS------S------------------------S--------S---------------S-------------------
--------------------------------------------------------------------------------
-----------------S--S-----------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------S-----------------------------------------------------------------
------------------------------------------------S-SSSSS-----S------------------S
S------------SSSSS--------------------------------------------------------------
---------------------S-------S-S------------------------------------------------
----S------------------------------------------------S-------------S--S-S-------
----------------------S---S--------------------------------S------S-------------
------------S-------------------SS------S---------------------------------------
---------S---------------------------S-----S-------------------------------S---S
----------------S-----------S---------------------SS-S---------------S----------
----------------------------S----S------S---------S------S--------------S-------
------------S-----------------S----SS----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-------------------
-------S---------------------------------------S-------------S------------S-----
-----S--------------------S----------S-----------------S------------------------
--------------------------------------------S---------------S---------S---------
---------S-------------------S--------------------------------S-----------------
S---------------------S---------------------------------------------------------
------------S--------------------------------------S----------------------------
-------------------------------------S------------------------------------------
-------S---S---------------------S------------------------------------S---------
-------S----------S----------------------------------------------S--------------
-------------------------------------S---------------------S--------------------
------------S----------S--------------------------------------------------------
S----------------------S------------S----------S-----------------S--------------
--------
>forward_903
--------------------------------------------------------------------------------
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---CCTCCTCCCTCTCGATCTCT---------------------------------------------------------
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--------
>reverse_2118
--------------------------------------------------------------------------------
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-------------------------------------ATCCACCACGGTGACAAATG-----------------------
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--------
