>input_sequence_80322
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--------------------------------------ATGGGTCTCGACGT------------------GCCGCCGAGG
TGCCGGTACCAGAGGCTGCGCGCCGAGCAAGG---------------CGACGACGGGGACGGCGAGGAGAGGC-------
-----------CGGCGGCGGCTTCGGCTACCAGGTGGA------------------------CGAGGGCGAGGCGGCCGC
TGCGGCT-------------GCGGAGGAGGG-----------------------CGGGGAAGAAGGTGGCGCCGCG----
-TCCGGGCGGCGGCAGGA-------GGGTGAG---GCTGATGCGGCTGGTGCTCGCGCTGCTGCCGGCGCG---------
-------------------------------------------------------------------------------G
CGGGCGGCGGCCCTGCTGGCGGAGCTGGTGCGGCGGATCGCGTGCGCGGCGGATTGCCCCGCCATCGTGTTCTCCTCGCA
GTGGGGGCTCCCGGCGCTGTCCCACT------CCGCGAGCGGCGGTGCCAGCCGGACAGCCAGGCTGCGGGCGTTCTACC
TCGAGAGGAGCCTCTCCGCCGGCTCCGGCTCCCTTCCTGGTCATCAGCAACATTAA------------------------
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>chr2D_1_TraesCS2D01G159500
TAGAGCATCTCTAACAGCCACGCGTTGCGCGGCTCGCTAAAAGTCAGAATACAACGTCGGATGAGTCAGGTTTTACGCGC
GGCGATGCGCTGGCTTCAGCGGCCGCCACAAAATAAAGCGCGCCCGAGCCGCTGCAGCAG--GCGCTATATTTCATTTTT
TTTGGTAA-AGAACAGG--------------------GATAGTTCGGCACATAGCCTGCTTCTACGATACAAAATGCGTA
CATAGTTCATAATCTTTTCCTACAATAGATATTTTATATAGTTCTATGATAC------------------AAAA------
AAACGAAAAACTACTACTACTCGTCATTCTCCGACTCGGACTCTGCCTCGGTGATGTCCTCCTCCGACGTCGAAGCGTAG
GCATCAAGGAACCGCTCGTCGCGGGAGTCCCAGGACCACGCATCTCCTAGCGCGATGTTGTATTTAGCGACCGCCTTCCG
CGTTCGCTTGTCCTCGCGATAGGC-GGCTCGCTCCTTCCTCCTCTCCT-C----CTCTCCGCCCTCCTCGCGGCGAAGAA
CTGTTTCTCGTTGATGATACCTTGCGGGAAGCGTTGCGTCCACAGCGCCATGGCTTCCTCGTCCATCTCGGCCAGGCTGA
GACGGCGCTACCGCCTCCGGTTTTTGTGCCGATCCTCGTCGGTGATAAGCCGCGGGAAAGGAGCCAACTCCTGTGCCCGC
TCCGGCGTCGCTGGAGCGCGCAAAAACGTCCCGCGCGCGCTAAAAGTCCATTTTACCGCGCGTGTCTTTTGGCGCGGCTG
TTGAAGATGCTCTTATGCTCGCGCGTCTTCCCGATCCCGACCTGCATGGCGCCACGATTCTTCCCCATGTGCC----AAC
GTATTCATTCACGATAATGGAATTTCATCCAGGCTTA-----TATATACGTGCGCCCGCAGGCTCGCTTGCTCCCCATGC
TTCCTACAGCTCAGAGCTCGCTCA----CTCGCCTCAGTC------GTCGGTTGACTCGCCGTCGCTTGCTTCGCTGCCA
CGAACCCTAGCTAGCTCAC-----ACTGCACAA-CCACATGGGTCTCGACGT------------------GCCGCCGAGG
TGCCGGTACCAGAGGCTGCGCGCCGAGCAAGG---------------CGACGACGGGGACGGCGAGGAGAGGC-------
-----------CGGCGGCGGCTTCGGCTACCAGGTGGA------------------------CGAGGGCGAGGCGGCCGC
TGCGGCT-------------GCGGAGGAGGG-----------------------CGGGGAAGAAGGTGGCGCCGCG----
-TCCGGGCGGCGGCAGGA-------GGGTGAG---GCTGATGCGGCTGGTGCTCGCGCTGCTGCCGGCGCG---------
-------------------------------------------------------------------------------G
CGGGCGGCGGCCCTGCTGGCGGAGCTGGTGCGGCGGATCGCGTGCGCGGCGGATTGCCCCGCCATCGTGTTCTCCTCGCA
GTGGGGGCTCCCGGCGCTGTCCCACT------CCGCGAGCGGCGGTGCCAGCCGGACAGCCAGGCTGCGGGCGTTCTACC
TCGAGAGGAGCCTCTCCGCCGGCTCCGGCTCCCTTCCTGGTCATCAGCAACATTAATGGCGGCAGTAGATGCACCTAAAT
TTCGCCATGCAAGAGAGAATCGGTTCTTGGAGAAGAGGAGATCGCGTCGTGGCATATTGGAGCTGATCACGCATGGTGGA
AGAAGATTGTCCATGGCCGGCTTTAATGCCGTTTGATGTAAA---TCTCGGAGAGATCGTGCAGTGCGATCTATGCAACC
ATAGTGATCGATTTTTATGATTAACTCAACAAGGAGAGTTCATTGTTGTTGTTTTTTTTTCCCAAT--------------
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--ATAAGGAGAGTCCAAGGTTGTACCAGCATTTCCCCGAGCG----------GCATCATGAGTTGCT----CTAGTATCT
AGTTTTGGAATAAAGGTA----ATTTTTTTTTTCAAAAATGAGGATAACACCT-GCCTCTACATCGAGCGATGCAGACAA
CACTACTAGAATCTGGTTATGTACTGGGCAATACATGTGTGCTGTCACGTGGATTATTTCTATTGGCTAAACTTTGCCAA
GTTTAGTGTGCCAAAACTCAGAAAATAGTTGGGCCACGTGGCGCTTCTGTTAACTGCCTGTCCTGTCTGACATTGTTGTT
CGCCGAATTTTTTCTGACAGGAACTCGGCAAACATTGTTTAAATATTCACTGACTTCATGATAGAAAGAACTTGGCAGTA
TTAATGATTGTCGAGCCCCGTCCAGCCAAGTGCGATGCGTCGAGTTTGGCACTCAGTGAAGATTTCACTTTAATATGGGC
TCTCCCGAGTTTCTTCGGACTCGGTAAAAAGGGCGATACTAGTAGTGCGGCCATCTTGGCATAGATCTGACATGATTTTT
TTTGGCATGAAAATAACTAAAAATTCATATCAAATTTCAAAGTTAGGCTAAAACTGAAGCTTCTCCAAGGATGCTCCG-C
CACTACTCGCGA----ACTTTATTTGTATCCGGTGCAAAATTTAGTGGCATGTTTGGAAGCTGGAAATTTGAGTGATATT
TTTGTTGCTCCGGTAGTAAATTTCAGCTCGTTTGCTAAACATCAGGTGCCTAGAAAAGA
>chr3B_2
-AGAGCATC---AACAGGCGCGCAATGTGTGGCGCGCTAAAAATGAGAATACCGCGCCGCGTTAGCCAGGTTTTGCGTGC
GGCGCTGCGCTGGCTCCAGCGGCCGCCACAAAATAAAGCGCGCCAGAGCCGCTCCAGTAGGCGCGCTATATTTCATTTTT
TCTTGAGACGATTGCATACATAGCATACAAATATGAAGATAGTTTGGCACATAGCCTGCTTCTACGATACAAAATGCATA
TATC-----TAGGCTTCTCCAATGATATATAGTTCTACTACATCCACATAGCCTGCTTCTACAATACA-AAATA------
AAACTAAAAACTACTACTACTCG---TTCTCCGACTCGGACTCTGCCTCGGTGATGTCCTCCTCCGACGTCTGAGCATAG
GCGTCAAGGAACCGCTCGTCACGGGAATCCCAGGATGATGCATCTCCTAGCTCCATGTTGTATTTAGCGACCGTCTTCCG
CGTTCGCTTGTCCTCGCGATAGGC-GGCTCGCTCCTTCCTTCTCTCCTCC----CTCTCCGCCCTCCTCTCGACAAAGAA
CTAGTCTTTGTTGATGATGTCTTGCGAGAAGA-TTGCCTCCACAGCGCCATGGCTTCCTCGTCCATATCGGCCAGGCTAA
GACGGTGCTCCCGCCTCCGGTGTTTGCGACAATCCTCGTCAGTGTTAAGCCGCGGGAAAGGCGCCAACTCCTGTGCCCGC
TCC-----------------------------------------------------------------------------
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>chr5D_39
--------------------------------------AAAAGTCAGAATACAGTGCCGGGTGAGCCAGGTTTTACGCGC
GGCGGTGCGCTGGCTTCAGCGGCCGCCGTAAAATAAAGCGCTCCCGAGCCGCTCCAGTAGACACGCTATATTTCATTTTT
TG-----A-AGAGCAAT--------------------GATAGTTCGGCACATTGCCTGCTTGTACGATACAAAATGCGTA
CATAGTTCATAGTCTTCTTCTACAATACATAGT------------------------TCTACGATACA-AAAAAGAAAAA
AACTGAAAAACTACTACTACTTGTCATTCTCCGACTCGGACTCTGCCTCGGTGATGTCCTCCTCAGACGTTGGAGCGTAG
GCGTCAAGGAACCGCTCGTCGCGGGAGTCTCTGGACGACGCATATCCTAGCGCGATGTTGTATTTAGCGACCGCCTTCCG
CGTTCGCTTGTCCTCGCGATAGGC-G-CTCGCTCCTTCCTCCTCTCCTCC----CTCTCCGCCCTCCTCTCGGCGAAGAA
CTGTTCCTCGTTGATGATATCTTGCGGGAAGCGTTGCCTCCACAGTGCCATGGCTTCCTCATCCATCTCGGCCAGGCTGA
GACGGCGCTCCCGCCTCCGGTTTTTGCGCCGATCCTCGTCGGTGATAAGCCGCGGGAAAGGAGCCAACTCATGTGCCCGT
TCCGGCGT------------------------------------------------------------------------
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>chr7D_74
TACAGCGCCG----------------------------------------------------------------------
---GGTGCTCTGGTTCCAGCGGCCGCCGCAAAATAAAGCGCGCCCGAGCCGCTCCAACAGGCGCGCTATATTTCATTTTT
TTCTTGTGGAGAACAGT--------------------GATAGTTCGGCACATAGCCTGCTTCTACGATACAAAATGTGTA
CATAATTCATAGTCTTCTCCTACAATAGATAGTTTATATAGTTCTACGATAT------------------AAAA------
AGACGAAAAACTACTACTACTCATCATTCTCCAACTCGGACTCTGCCTCGGTGATGTCCTCCTTTGACGTTGGAGCGTAG
GCGTCAAGGAACCGCTCGTCGCGGGAGTCCTAGGATGACGCATCTCCTAGCGCGATGTTGTATTTAGCGACCGCCTTCCG
TGTTCGCTTGTCCTCACGATAGGCGG-CTCGCTCCTTCCTCCTCTCCTCC----CTCTCCTCCCTCCTCTTGGCGAAGAA
CTGTTCCTCGTTGATGATATCTTGCGGGAAGTGTTGCCTTCACAGCGCCATGGCTTTCTCGTCCATCTCGGCCAGGCTGA
GACGGCGCTCCCGCCTTCAGTTTTTGCGCCGATCCTCGTTGGTGATAAGCCGCGGGAAAGGAGCCAACTCCTGTGCCCGC
TCCGGCGTCGC---------------------------------------------------------------------
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>chr5B_175
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-------------------------------------GATAGTTCGGGACATAGCCTGCTTCTATGATACAAAATGCGTA
GATAGTTCATAGTCTTCTCCTACAATAGATAATT-----TATATAG----------TTCTACGATACA-AAAAA------
AAATGAAAAACTACTACTACTCGTCATTCTCCGACTCGAACTCTGCCTCGGTGATGTCCTCCTCCGACTTCGGAGCGTAT
GCGTCAAGGAACCGCTCGTCGCGGGAGTCCCAGGACGACGCATCTCCTAGCGCGATGTTGTATTTAGCGACCGCCTTCCG
CGTTCGCTTGTCCTCGCGATAGGCGG-CTCGCTCCTTCCTCCTCTCCTCTCTCTCTCTCCGCCCTCCTCTCGGCGAAGAA
CTGTTCCTCGTTGATAATATCTTGCGGGAAGCGTTGCCTCCATAGCGCCATGGATTCCTCGTCCATCTCGGCCAGGCTGA
GACGGCGCTCTCGCCTCCGGTTTCTGCGCCGATCCTCGTCGGTGATAAGCCGTGGGAAAGGCGCCAACTCCTGTGCCCGC
TCCCGCGTCGC---------------------------------------------------------------------
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>chr3D_175
--------------------------------------------------------------------------------
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-------------------------------------GATAGTTCGGCACATAGCCTGCTTCTACAATACAAAATGCGTA
GATAGTTCATAGTCTTCTCCTACAATAGATAATTCATAGTTCGTCACATAGCCTGCTTCTACGATACA-AAATA------
AAACGAAAAACTACTACTACTCGTCATTCTCTGACTCGGACTCTGCCTCGGTGATGTCCTCTTCCGACGTCTGAGCGTAG
GCGTTAAGGAACCGCTCGTCGCGGGAGTCCCAGGACGACGCATCTCCTAGCGCGATGTTGTATTTAGCAACCGCCTTCCG
CGTTTGCTTGTCCTCACGATAGGCGG-CTCGCTCCTTCCTCCTCTCCTCC----CTCTCCGCCCTCCTCTCGGCGAAGAA
CTGTTCCTCGTTCATGATGTCTTGCGGGAAGCGTTGCCTCCACAGCGCCATGGCTTCCTCGTCCATCTCGGCCAGGCTGA
GACGGCGCTCCCGCCTCCAGTTTTTGCGACGATCCTCGTCGGTGATAAGCCGCGGGAAAGGTGCCAACTCCTATGCACGC
TCCCGCGTCGC---------------------------------------------------------------------
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>chr4D_209
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-----------------------------------------------------------------------AAATGCGTA
CATAGTTC--AGTCTTCTCCTACAATACATAGTCCATAGTACATAG----------TTCTACGATACATAAATA------
AAACGAAAAACTACTACTACTCGTCATTCTCCGACTCGGACTCTGCCTCGGTGATGTCCTCCTCAGACGTTGGAGCGTAG
GCGTCAAGGAACCGCTCGTCGCGGGAGTCCCAGGACTACGCATCTTCTAGCGCGATGTTGTATTTAGCGACCGCCTTTCG
CGTTCGCTTGTCCTCGTGATAGGCGG-CTCGCTCCTTCCTCCTCTCCTCC----CTCCCCGCCCTCCTCTCGGTGAAGAA
CTGTTCCTCATTGATAATATCTTGCGGGAAGCGTTGCCTCCACAACGCCATGGCTTCCTCGTCCATCTCGGTCAGGCTAA
GACAGCGCTCCCGCCTCCGGTTTTTGCGCCGATCCTCGTCGGTGATAAGCCGCGGGAAAGGAGCCAACTCATGTGCCCGC
TCCGGCGTCGCCACGTCAGTGAAGTTCATGTC------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------CCAACGGGACCGTCGGAGGCGCC-------
-----------ACGCCGCAGCGTCGTACGCGCGGGCACCGTCCTGGGCGGTGTCGAAGGTTCCGAGGCCGAGGCGCACGC
CACCGCCCAACCGGATCGAGGCGGAGTATGTGCCGGACGGACGCACGCGGACGCCGCGGTAGCCCGAACCTCCCCG----
-GCGGCGAGGCGGCATGA-------TGGCGCG---GTGGTG-----------TC---GTGTCGGCGGCGAGGAGAGAAAG
CGCTAGAGGGAGCGAGAGAGAGTGGCAGAGGGCGCCGCAATTTATAGGCGCGCCGAACGCGGTGCGCCAAATCTAGCGTG
CGGGCTGCCGCCTTTTCC--------------------CGCGCGCGCGCAATCGTTTCCCGCCACCGCTGGAGCGCGCGA
AAACGTCCCGCACGTGCTAAAAGCCCAGTTTACCGCGAGCGCGTC-----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------TTTTGGCGCGGCTGTTGAAGATGCTT--------
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--------------------------------------------------------------------------TA----
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>chr2B_758
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----------TCTTATGCTCCCGCGTCTTCCCGACCCGGACTTGCATGGCGCCACGATTCTTCCTCATGTGCC----AAC
GTATTCCCAATAATGGAAGGAATTTTATCCACGCTTATACAGTATATACGTGCGCCCGCAGGCTCGGCTGCTCCCCATGC
TTCCTACAGCTCAGAGCTCGCTCGCTCCCTCGCCTCAGTC------GTCGGTTGACTCGCCGTCGCCTGCTTCGCTGCCA
CGTACCGTAGCTAGCTCAC-----ACCGCATAA-CCACATGGGTCTCGACGT------------------GCTGCCGAGG
TGGCGGTACCAGAGGCTGCGCGCTGAGCAAGG---------------CGACG---GGGACGGCGACGAGAGGC-------
-----------TGGCGGCGGCTTCGGCTACCAGGTGGA------------------------CCAGGGCGAGGCGGCCGC
TGCGGCT-------------GCGGAGGAGGG-----------------------CGGGGAAGAAGGTGGCGCCGCG----
-TCCGGGCGGCGGCAGGA-------GGGTGAG---GCTGATGCGGCTGGTGCTCGCCCTGCTGCCGGCTCG---------
-------------------------------------------------------------------------------G
TGGGCGGTGGCCCTGCTGGCGGAGCTGGTGCGGCGGATCGCGTGCGCGGCGGAGTGCTCTGCCGTCGTGTTCTCCTCGCA
GTGGGGGCTCCCCGCGCTGTCCCACT------CCGCCAGCGGCGGGGCCAGTCGGACAGCCAGGCTGCGGGCGTTCTACC
TCGAGAGGAGCCTCTCCGCCGGCACCGGCTCCCTTCCTGGTCATCAGCAACATTAATGGCGGCAGTAGATGCACCTAAAT
TTCGC-------GAGAAAATCAGTTCTTGGAGAAGAGGAGATCGCGTCGTGGCATATTGGAGCTGATCACGCGTGGTGGA
AGAAGATTGTCCATGGCTC----TAATGCCGTTTGATGTAAAAAATCTCGGAGAGATCGTGCACTGTGATCTATGCAACC
ATAGTGATCGATTTTTATGATTACCTCAACAAGGAGAGTTCATTGTTGTTGTTTGTTTTCGAAGAGGTAATATCACCGGT
TGTCATAGAACTTGCGTTGCATGTTCAGTTTGATGCTAAAACTTCGAAAATATGGTTTTGTGGTCACTCAAGCGTGCAAA
TACGGTCACAGTATGCGTATACAGACATATCAATGTGTATGGCCCCACTCGTCAGTGACGAACGCGACGTATTTTACACA
GAACACCCTGATTTTTTTTATTTGTGGAAGAAGTGAACCACAGCAATGTATTTTTACAGCAAACACCCTAACTTTTTTTA
TTTACAGAAGACAGGCCCGCAATAAGTCAATACTGCACATAAATGCGAACATTGAAACTTCTCTTATTTAGAGAAAACAG
GACCACAATACTGCACATATATGCGAACATTAAAACTTCTTTTATTTACAGAAAACATGACCACAATACTGCACATATAT
GTGAACATTAACAACAAAAATGGCATGCCAGGACTCGAACAGACGAGCAACTATTTTTTAACCCGAGAATACAAATGCAA
AAAATTAACGCCAAAAAGGAATCTACTAGGACTTGAACCTACAACCAACTGCTTAAATCAATACAATCTAGACACTACAA
CCGGTCAGATCTGGATGTCTAAAATGGATCAGGAACTTATATATATTAAACGAGGATGCATGTGAAGTTTAAATAGGCTA
CGGAGACTGCGGCCCATTTTATCTGAGGTATTTAAAAATATATATAAACATGTGTACCATATAAATGTGCGTATTGCATA
TTTGGTTTTCAAAAATATTATTTCAATTATACGAACATTTCAATAATTATATATACGCACATTTTGTATAGTTCAATGTT
TGTATAATTAAAAATATTAATAATTTAAAATTTAATCTGTTAAACAAATATTCAGTCGTGGCTAATATGTAAGTTATATA
ACTTTGTTGAATATAAGTCATGAATAAAAAATTTACACAAGTGAATAGTCATAAATATTTAGTAAATATTTGTGTTCATC
ATATTTTATAATTTAAATATAAGCCTCAAGTGTATTCTTTTGAATTTTTAAAAAATGTTTATCTAATAAATATTATCAGT
GTCCATATTAACTAAATATAAGCCGCAAGTGTATATTTAAATGTTTTTATCTACTAATCATTATTTGTATATATAATATT
TTTTAACACACAAATATGTGAATGTACCTTTATTACTTACAAATTATCTTTTAAAAAATAGTGCGCGCAAAATGGGCCGT
AGTACCTGCAACTCAATTAAGCTCCACATGAGTCCCCATGAAATACATATATGTTGATTATCCATATTAGACGAAATACA
TATATGTACAGTATCATGGTCCTATTTTTCTTTAAAAAATAATTTGAGGGTGTTTTGTGCAAAAAAATACGTCGCTGTGG
TTGATTGTTTCGAAAATAATTATTTTCAGAGTGTTCTGTGTAAAAATACATCAAGCCCAGCGCCATCAGTCACTGACAAA
TGGGGCCATACACATGTATACGCCCGCATATGCGTAGTGTGACCGTATCTGCACGCTTGAGTTAAGTTATGTGCCCAGAA
AACCGTATTTTCACAGTTCTAGCACCAAACTGAACGTGCGGTGCAAGTTCAATGACTTCCCGTGATATTACCTCTTTTTT
GAATAAGGAGAGTCCAATGTTATACCAGCATTTACACAAAATCTTGGCCTAAGCATCATGTGTTGCT----CTAGTATCT
AGTTTTGGAATAAAGATAATT-ATTATTATTTTCAAAAAGGAGGATAACCCCTTGCCTCTACAT-GAGCGATGCACACAA
C-------------------------------------------------------------------------------
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>chr2A_797
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-------------------------------------------------CGCCACGATTCTTCCCCATGTGCCCGCCAAC
GTATTCCCAATAATGGAAGGGATTTCATCCAGGCTTA-----TATATACGTGCGCCCGCATGGTCGGCTGCTCCCCATGC
TTCCTACAGCCCAGAGCTCGCTCACTC----GCCTCAGTC------GCCAGTTGACTCGCCGTCGCTTGCTTCGCTGCCA
CGAACCCTAGCTAGCTCAC-----ACCGCATAACCCACATGGGCCTCGACGT------------------GCCGCCGAGG
TGCCGGTACCAGAGGCTGAGCGCCGAGCAAGG---------------CGGCGACGG---------GGAGAGGC-------
-----------CGGCGGCGGCTTCGGCTACCAGGTGGA------------------------CGAGGGCGAGGCGGCCGC
TGCGGCT-------------GCGGAGGAGGG-----------------------CGCGGAAGAAGGTGGCGCCGCG----
-TCCGGGCGGCGGCAGGA-------GGCTGAG---GCTGATGCGGGTGGTGCTCGCCCTGCTGCCGGCGCG---------
-------------------------------------------------------------------------------G
CGGGCGGCCGCCCTGCTCGCGGAGCTCGTGGGGCGGATCGCCTGCGCGGCGGAGTGCCCCGCCATCGTCTTCTCCTCGCA
GTGGGGGCTCCCCGCGCTGTCCCACT------CCGCCAGCGGCGGCGCCAGCCGGACAGCCAGGCTCCGGGCTTTCTACC
TCGAGAGGAGCCGCTCCGCCGGCACCGGCTCCCTTCCTGTTCACCAGCAACATTAATGGCGGCAGTAGATGCTCCTAAAT
TTCGCCATGCAAGAGAGAATCAGTTCTTGGAGGAGAGGAGATCCCGT---GGCATATTCGAGCTGATCACGCGTGGTGGA
AGAAAATTGTCCATGGCCGGCTTTAATGCCGTTTGATGTAAA---TCTCGGAGAGATCGTGCACTGTGATCTATGCAACC
ATAGTGATCTATTTTTATGATTAACTCAACTAGGAGAGTTCCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTT--------
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--------------------------------------------------------------------------TTCTTC
GAATAAGGAGAGTCCAATGTTGTACCAGCATTTCCACAAAATCTTGGCCTAAGCATCATGTGTTGCTAGCTCTAGTATCT
AGTTTTGGAATAAAGATAATGTATTTTCTTTTCAAAAAAGGAGGATAACCCCCTGCCTCTACACCGAGCGATGCACACA-
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------GCCATCTTGGCATAAATCTGACATGATTTTT
TTA-GCATGAAAAGAACCAAAAATTTATATCAAATTTCAAAGTTTGGCTAAAACTAAAGCTTCTCCGGGGATGCTCCGGC
CACTACTCGCGATAGTACTTTATTTCTATCCGGTGCAAAATTTAGTGGCATGTTTGGAAGCTAGAAATTTGAATGATATT
TTTGTTGCTCCAGTAGTAAATTTCAACTCGTTTG-------------------------
>chr2D_837
--------------------------------------------------------------------------------
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-------------ATAATCGAACTTCGTCCGGTCCTA-----TATATACCGGCGCCCGTAGGCTCGCTTGCTCCCCATGC
TTCCTACAGCTCACAGCTCACTCGTCTCT--------GACCGGCCGGTTGGTTAACTTACCTTAGCTGCC----------
---ACCTTAGCTAGCTCAC-----A--------------TGGGTCTGGAGGTGCTCACGGCGAGGGACCAGCTGCCGAGG
TGCCGCTACCAGCGGCTCCGCGGCGAGCTCTG---------------CGACGACGGCGACGGTGAGGAGGTCGGAAATGA
TGTGACGGCTGCGGGTGCGGCGTCGGCCGCCAGGTGGA------------------------CGAGGGCGAGGCGGCCGC
TGCGGCT-------------GCGGAGGAGGTTGT--------------------CGGGGAAGAAGGCGGTGCCGGTGCTG
TTCCGGATGGCGCAGCGCAGGCGCGGGGTGAGGCTGCTGATGCGGCTGGTGCTC---CTGGCGCCGGCAAG---------
-------------------------------------------------------------------------------G
CGGGCGGCCGCGCTGCTGGCGGAGCTGGTGCGGCGGATCGCGTGCGCGGCCGAGTGCCCCGCCATCGTCTTCTCCTCGCA
GTGGGGGCTCCCCGCGCTGTCCCACT------CCGCCAGCGGCGGCGCCAGCCGCACCGCCAGGCTGCGGGCTTTCTACC
TCGAGAGGAGCCTCTCCGCCGGCTCC------------------------------------------------------
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-----------------------------------------------------------
>chr2B_837
--------------------------------------------------------------------------------
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-------------ATAATCGAACTTCGTCCGCGCCTA-----TATATACCAGCGCCCGGAGGCTCGCTTGCTCCCCATGC
TTCCTACAGCTCACAGCTCTCTCACTC----GTCTGCGACCGGCCGGTTGGTTAA-----CTTAGCTGCC----------
---ACCTTAGCTAGCTCACCTCACA--------------TGGGTCTCGAGGTGCTCACGGCGAGGGACCAGCTGCCGATG
TGCCGCTACCAGCGGCTCCGCGGCGAGCTCAGCAACGACGACGGCGACGGCGGCCA---------GGAGGTGG-------
-----------CGGCGTCGGCGTCGGCCGCCAGGTGGA------------------------CGAGGGCGAGGCGACCGC
TGCGGCT-------------GCGGAGGAGGCTGT--------------------CGGGAAAGAAGGCGGTGCCGGTGCTG
TTCCGGATGGCGCAGCGCAGGCGTGGGGTGAGGCTGCTGATGCGGCTGGTGCTC---CTGGCGCCGGCGCG---------
-------------------------------------------------------------------------------G
CGGGCGGCCGCGCTGCTGGCGGAGCTGGTGCGGCGGATCGCGTGCGCCGCCGAGTGCCCCGCCATCGTGTTCTCCTCGCA
GTGGGGGCTCCCGGCGCTGTCCCACT------CCGCCAGCGGCGGCGCCAGCCGCACCGCCAGGCTGCGGGCTTTCTACC
TCGAGAGGAGCCTCTCCGCCGGCTCCGGCGCC------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>SNPs
---------SSS-----S-S---SS--S-S---S-------------------S--S---S----S--------------
----S------------------------------------------------S--------------------------
---S-SS---------S---------------------------------------------------------------
-----------S----S--------------S--------------S---------------------------------
------------------------------------------------------------------------S-------
--S---------------------------------S-------------------------------------------
---------------------------------------------------------------------S----------
-----S-------------S-----------------S------------------------------------------
---------S----------------S-----------------------------------------------------
-----------SSSSS-SSSS--SSS-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----------S-------------S--S---S--------------------------------------
------SSSSSSS-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S---S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------S--------------------------------------------------S-------
---------------------------------------------------------------S--S-------------
-----------------------------------------------------------SSSS--S--------------
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-----------------S-----------------S-S-SSS------------------S-------------------
---------------S-----------------------S---------S-------------------------S----
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S----------------
--SS---------S---S-------S------------------S----------S----------SS------------
-------------------------S------------------------------------S---------S-------
-----------S-------------S--------SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_791
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTTACCGCGCGTGTCTTTTG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>reverse_3795
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------ATGTGTGCTGTCACGTGGAT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
