>input_sequence_80234
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------------------------------------------------------------ATGGCCGCCGCTTCGCTGCT
CCACCTCGCCACCCCCATCTCCTCCCCCCGCCTCCATCTCGGCCACAGCGCCGCCATCCTGCT------CGGCCGTCAGC
ATCCGCAAGTGCGGCTGACGGCGGCGG------CGCCGCGGGCGCACCGGGTGACGATCGAGCACGGCGGCGAGTCGCGG
GTGGTGGAGATGGAGGAGGACGAGAACATCCTGGAGCGGGCGCTGGAGGAGGGGCTGGACGTGCCGCACGACTGCAAGCT
CGGGGTGTGCATGACCTGCCCGGCGCGGCTGGTGTCCGGCAAGGTGGACCAGAGCGACGGCATGCTCAGCGACGACGTGG
TGGCGCAGGGCTACGCGCTGCTCTGCGCCGCCTACCCGCGCTCCGACTGCACCATCCGCGTCATCCCCGAGGACGAGCTG
CTCCAGGTCCAGCTCGCCACCGCCAACGACTGA-----------------------------------------------
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>chr4A_1_TraesCS4A01G297900
CTCATCGAAGAGCGCGTCGGTCGCCGCCCATTCCTGCCGGTTGGCTTCCACATAGGCCTCATGATGGATGGACTCCATGA
TGGCCTGCTGCTCCGCCATCTCGGCCGCTTGGGCGACCACGAACTCTGCCTTCGCATCCTACATGTTGAAGCCCGGAGCC
G------GACGCGACGCCA---------------GTTCCCCCTCCTTCGACTGCCCACCTCCTCCGCATCCGCCACCCCC
ATCGAAGCCA------------------CCTCCTCCTCCTCCTCCTCCTC---CTCATC---CTCTT---GCTTCGGCGA
GTCCAGAGGCAAGTCGGCCGCGATACATGCGGCACGGATCAC---------CCGGATCCCC-TGCTCAATCTAGAACTGG
TGCTCCGGCGTGAGCATAGCATAGGTGGTCTTCCTTTGTCAAACCATG----GCGAAGCCGGAGGGCGTGGGAAGAGCGG
CAGAGCAGGAGAGAGGTGGTAGATGGGCTCTGGCTGACGGCGCGGAGAGGGGGGAGGTGGATGTGGCTA-GGGTTGGGGG
ACGCCGGCTGGCTTAAATAGCGG--------CTTGGGCGATGAGCTGGAGCGGCGCCACGCGACGTTCACA---C-CCCC
-ACCGAAGGAGACGCCTGTTGAACCACCAGAATTCCGAACGATTTCGTGTGAAATTCC-ATTGTCAGTCCGACGTGACAG
ACGCG---CCCGGACATCCTATATTTTGGTTGAATGACGAGGGATACCTGTCAGACCAGACGTTTGAGGCCCGTCTGGAT
TGTATTTTTGTGACCGGGCCGTCCGCCCCGGGGGTTTGAGGCGCCCGGCGGTATTAAGGGGGGCTGACATGGGGGGAGGC
AGTTCGGTACATAAAATGTATGTATTTCCCATGAGGCGGATCTAGCGGGTAAGAATGGATCGAGGAAGTAAATGAGCGGC
CGTGATTACACCAAGGCAAAGCGAGACAACACAGCAGAGCAGCACAGCGCCTTATCCTCTAGCTAGCA------------
-----CACCACCTGCCCTGCCCCGCGCACCGCACACAAACGCCGAG---CCGGGCACGCCATGGCCGCCGCTTCGCTGCT
CCACCTCGCCACCCCCATCTCCTCCCCCCGCCTCCATCTCGGCCACAGCGCCGCCATCCTGCT------CGGCCGTCAGC
ATCCGCAAGTGCGGCTGACGGCGGCGG------CGCCGCGGGCGCACCGGGTGACGATCGAGCACGGCGGCGAGTCGCGG
GTGGTGGAGATGGAGGAGGACGAGAACATCCTGGAGCGGGCGCTGGAGGAGGGGCTGGACGTGCCGCACGACTGCAAGCT
CGGGGTGTGCATGACCTGCCCGGCGCGGCTGGTGTCCGGCAAGGTGGACCAGAGCGACGGCATGCTCAGCGACGACGTGG
TGGCGCAGGGCTACGCGCTGCTCTGCGCCGCCTACCCGCGCTCCGACTGCACCATCCGCGTCATCCCCGAGGACGAGCTG
CTCCAGGTCCAGCTCGCCACCGCCAACGACTGACCGACCCCT-----CATCGCCTCACGCCGGCCGGCCGGCGGCCACCT
CGCGCGGCGTCGATCGGCAGAGTTCATGTGCTCCGAGGCTCTGTACAATGTATTTCACCAGCCATTACAATAAGATGCCC
TTTTTTTTTGCCTA--ATAATCAGTTGCTTCAGTTGTTGCCTGAACAATCTTTGCG--TTCCTGCTTGTTATGCTTGAAA
CATTGGTTCAGCGATAACCGGAACATCAGCGAA--------------------------TCGAAAGATTTCATATGAAGG
---CGAATCGAAAGATTTGATGGGCAAGAAGCACATCATTTGTAGTACTCCCTCCGTCCGGAAATACTTGTTAGAGAAAT
GGATGTATCTAGACGCGTTTTAGTTTTAGATACATCCATTTTTACCCATTTCTTCGACAAGTATTTCCGGACGGAGGGAG
TACTAGTTTAACTTGATGTTCTAACACACAGCACAAGTTCAGTCTTGAGCCAG-AGACATGCATATCCAGATTACAAGCA
TGGGGAGCA----GATAGATATAAGTAGTAAGGTCCTTATTTATTTCGGAGTAACGCATGGCACTGGATGTTTTCCCTCA
AATTCTGCAGCTTCCATCATCTTCAGTCTCGAGGTGGGC-ATCACTACCTGCAACCAAACAAGCAAAATAGATAATGTGG
ATCAGTGTAAC-CGGTACTCATGTGCAAGAAAGAAAAACTGACAGCACTTCAGCATAGCATAGCAGCCTAACTGCTCCCT
GCTT-GTTTGCCGTGGCAGCTGCGAAAAACCGCCGATGCAATTTAAGCTCGGGAAATTGGTTTCGGAAATGGTAGGCGCC
GGCACAGCTTGCAATGGATTCTCAACTGCAACATCAGTTACCACTTACATGGGTGTCGCAGAAGTAGAAGGTGTTTCCTG
CTCCCAGCAGGTTACTTATCGCCTGGGCTCGAGCTTGTGACTTCTAGACCATTGCCTGCGGTAGAGGCAGAACCAAGCTG
TCAATGATGGTTGAGGTGTGGATGTTGTTGGAATGGACT
>chr5A_1
CTCGTCGAACAATGCGTCGGGCACCGCCCATTCCTGCTGGTTGGTCTCCACATAGGCTTCATCCTGAATGGACTCCAGGA
TGGCCTGCTGCTCCGCCATCTCGGCCACTCGGGCGACCGTGAACTCCGCCTCGGCATCCTCCATGTTGGAGCCCGGAGCC
G------ACGCCAGCTGCT---------------CCGCC------------T--CATCCTCGTCCGAATCCGCCATCTTC
ATTGGAGCCGGTTGCTGCTCCTCTCCCTCCTCCTTCTCCTCCTCCTCCTC---CTCCTC---CTCCG---ACTCCATCGA
GTTCGGAGGCAGCCCAGCAGCGACGCAGGGAGCACGCGCGGCGCCCTTCGTCCGGATCTCC-TGCTCGATCTGGTACCGA
CGCTCCAGCGTGAGCATAGTGTATGCGGTTATCTTTTGCCTGACCATG----GAGAAGCCGGAGAGCGTGGGAAGAGCAG
CGGAGCAGGAGAGAGGACATGGTTGGGCTCGTCTTGGCGGCGCGGAGAGGAAGGAGGTGGATGA-GCCA-AGGTTGGCGG
ACGTCGACCGGCTTAAATAGCCGGATTTGGCCTCGGGCGACGAGCCGAAGCAGCACCATGCAGCGTTCACA---C-CCCT
CACCGGAGGAGACG------------------------------------------------------------------
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>chr3B_5
TCGAG-----AGCGCGTCGGTGGCCGCCCTTTCCTGCCGATTGGCCTCCACATAGGCCTCATCCTGGACGGACTACAGGA
TGGCCTGCTGCTCCGCCATCTCGGCCGCTTGGGCGATAGACAAGTCCGCCTCCGTGTCCTCCATGTTGGAGCT-GGAGCC
G------GTGCTAGCTCCT---------------ACTCCGGCTGCTCCGCCT--CGTCCTCGCCCGTGTCCGCCACCTCC
ATCGGAGTTGGTTGCTGCTCCTCTCCCTCCTCCTACTCTGCCTGCTCCTC---CTCCTC---CTCCG---GCTCCGGCAA
GTCCAGAGGTAGTCTGGTAGCGATGCGAGCGGCGTGCGCGGAGCCCCTCG-CCAGATCTCC-TGCTTGATCTGGTACCAG
TGCTCCGGCGTGAGCATAGCGTACGTGGTTATCCTGTGCCGGACCATG----GCAAAGATGGAGAGCGCGGGAAGAGTGG
CGGAGCGGGAGAGAGGAGGTGGATGGGCTTGGGTTGGCATCATGAAGAGGGAGGAGGTGGATGA-GCTA-GGGTTGAGGG
ACACCGGTCGGCTTAAATAGCCAGATTTGGCCTCGGGCTGCAAGCCAGAGCGGCGCCATGCGGCGTTCACA---C-CCCC
-ACTGGAAGAGACG------------------------------------------------------------------
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>chr2D_34
---------------------------------CTGCCCGTTGGCCTCCACATAGGCT-CATCCCGGTTGGACTCCAAGA
TGGCCTGCTGCTCCGCCATCTCGGCCGCTTGGGCGACAGCGAACTCCGCGTCCGCGTCCTCCATGTTGAAGCCCGGAGCC
G------GCGCCAGCTCCT---------------CCTCCGGCTGCTCTGCCT--CGTCCTCATCTGGATCCATCATCTCC
ATCGGAGCCAGCTGCTACTCATCTTCCTCCA------------CCTCCTC---ATCCTT---CTTCG---GCTCCGGCGA
GTCCGGAGGCAGGCGGACAACAATGCGAGCGACGCGCATCAC---------CCAGATCTCC-TCCTCAATCTGGAACCGA
TGCTCCGGCGTGAGCATAGCATACGTGGTCTTCTTTTGCCGAGCCATG----GCGGAGCCGGAGGGCGTGGGAAGAGCGG
CAGAGCGGGAGAGAGGTGG---ATGGCCTCGGGCTGGCGGCGCGGAGAGGGAGGAGATGGATGTGGCTT-GGGTTGGGGG
ACGCCGGCCAGCTTAAATAGTCGGATTTAGCATCGGGCGGCGAGCCAGAGCGGTGCCATGCGGCATTCAAA---C-CCCC
-ACCGGAGGAGACGTCTGTCGGACCGTCGGGTTTCCGGGCGATTCCGTGTGGGACCCCCATCGTCTGTTCGACGTGCCCG
GGCGCCCCCATATCCGTCCTACATTTGGGCTGGATAT-GAGGGGTGCTGGTCAGCACTGGCATTTGAGGCCCGTTTG---
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>chr2D_34
---------------------------------CTGTCGGTTGGCCTTCACATAGGCCTCATCCTGGATGGACTGCAGGA
TGGTTTGCTGCTCCGCCATCTCGGCCGCTTGGGCGACCACGAACTCCGCCTCCGCGTCCTCCATGTTGAACCCCGGAGCC
G------GCGTTAG---CT---------------CCTCCGGCTACTCCGCCT--CGTCCTCCTCCGGATCCACCACCTCC
ATCGAAGCCGACTACTGCTCCTCTTCCTCCT------------CCTCCTCCCCCGT-TC---CTCCG---ACTCCCGCGA
GTCTCGAGGCTGGCTGGCAGCGATGCGGGCGGCGCGCCTCGC---------CCGGATCTCC-TACTCAATCTGGAACCGG
CGCTCCGGCGTGAGCATAGCATAG-TGGTCTTCTTTTTCCGAAGCATG----GCAAAGCCGGAGGGCGTGGGAAGAGCGG
CGGAGTGGGATATAGGTGG---ATGGGCTCGGGCTGGAGGCGCAGAGAGGGAGGAGGTGGATGTGGATCGGGTTTGGCGG
ACGCCGGCCAGGTTAAATAGCCAGATTTTGCCTCGGATGGCGAGCCGGAGCGGAGCCACGTGACTTTTACA---C-CCCC
-ACCGGAGGAGAGGTCCGTCGGACCGCCGGTTTTCCGGGCGATTCCGTGTGGGACCCC-ATCGTCAGTCTGACATGGCGG
ACGCG---CCCGG-------------------------------------------------------------------
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>chr2D_34
---------------------------------CTGCTGGTTGGCCTCCACATAGGCCTCATTCTGGACAGGCT-CAGGA
TGGCCCGCTACTCCGCCATCTCGGCCGCTTGGGCGACCGTGAACTCCGACTCCGCGTCCTCCATATTGAAGCCCGGAGCC
G------GCGCCAGCTCCT---------------CCTCCGACTA------CT--CCACCTCCTCCACATCTGCCACCTTC
ATCGGAGCCGGCTGCTGCTCCATTTCCTCCT------------CCTCCGGCTGCTCCTC---CTCCT---GCTCCGGCGA
GTCCAAAGGCAAGTCGACAGCGATGTGGGCGGTGCGCCTCAC---------CAGGATCTCTTTGCTCAATCCGAAACCGG
CGCTCTGGCGTGAGCATAGCATAGGTGGTCTTCTTTTGCCGAACCATG----GCGAAGCCGGAGGGCGTGGGAAGAGCGG
TGGAGCGGGAGAGGGGTGGTGGATGGTCTAGGGCTGGGGTCGCAGAGAGTGA--AGGTGGATGTGGCTA-GGGTTGGGGG
ACGCCAGCTCGCTTAAATAGCTGGATTTGGCCTCGGACGGCGAGCCGAAGTGGCGCCACGTGTCGTTCACCTCCC-TCCT
-ACCGGAGGAGACGTCCGTCGGGCTGCCAAATTTTCGGGCAATTCCATGTGGGAC-CC-ATCGTCAGTCCGACGTGACGG
ACGCG---CCCGG-------------------------------------------------------------------
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---------------------------------------
>chr1A_34
---------------------------------CTGCCGGTTGGCCTCCACATAGGACTCATTCTGGATAGACTCCAGGA
TGGCCTGCTGCTCCGCCATCTCGGCCGCTCGGGCGACCGCGAACTCTG---CCTCGTCCTTCATGTTGAAGCCCAGAGCC
G------GAGCCGGCGCCAACTACTCCTCCGGTTG---------------CT--TCGCCTCCTACAAATTCGCCACCTCC
ATCGGAGCCAGCTACTGGTCCTCTTCCTCCT------------CCGCCTCCAGCTGCTC---CTCCT---GCTTCGGCGA
GTCTGGAGGCAAGTCGGTCACGATGCGTGCTGCATGCCTCGC---------ACGAATCTCC-TGGTCAATCTAGAACCAG
CGCTCCGACGTGAGCATAACATACGTGACATTCTTTTGCCGAACCATG----ACGAAGCCGGAGGGCGTGGGAAGAGCGC
-GGAGCGGGAGAGAGGTGGTGGATGGGCTCGGGCTGGCAGCGCAAAGAGGGAGGAGGTGGATGTGGTTGCTGTTGGG-GG
ACGATAGCCGGCTTAAATAGCTGGATTTGGCCTCAGGCGGCGAGCTGGAGCGGCGCCACACGACATGCACA---C-CCCC
T--CAAAGGAGACGTCCATCGAACCGCCGGGTTTTTGGGCGATTCCATCTGGAACCCC-ATCGTGAGTCCGACGTG----
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---------------------------------------
>chr3A_34
---------------------------------CTGTCGGTTGGCCTCCACATAGGCCTCATCCTGAATGGACTCTGGCA
TGGCCTGCTTCTCCGCCATCTCGGCCGCTTGGGTGACTGCGAACTCCGCCTCCGCGTCCACCATGTTGAAGTCCAGAGCC
G------GAACCGGTGGCA---------------G---------------CT--CCGCGTCCTCCGGATCCGCCACCACC
ATCGAAGTTGGCTGCTGCTCCTCTTCCTCCT------------CTGCCTCCGACTGCTCGTCCTCCT---ACTCCAGCGA
GTCCGGAGGCAAGCCGACTGCGATGCGTGCGGTGCACCTCGC---------TCGGATCTTG-----TGATCTGGAACTGG
CGCTTCGGCGTGAGCATAGCATAGGTGGTCTTCTTTTGCCGAACCATG----GCGAAGTCGGAGGGCATGGAAAGAGCGG
TGGAGTGGGAGAGAGGTGGTGGATGGGTTCGGGCTGGCGGCGAGGAGAAGGAGGAGGTGGATGTGGCTAGGGTTGGG-GG
ACGTTGGCCGGCTTAAATAGCCGGAATTGGCCTCGGGCAGCGAGCGGGAACGGCGCCACGCGGTGTTCACA---CACCCC
-ACCGGAGGAGACGTCCGTCGGACTGCCGGGTTTCCAGGTGATTCCGTGTGGGACCCC-ATCGTCAGTCCGAC-TGGCGG
ACGCG---CCTGGACGTCCCTATAT-------------------------------------------------------
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>chr1D_34
---------------------------------CTGTCCGTTGGCCTCCATATAGGCCTCATCCTGGATGGACTCCAAGA
TGGCCTGTTGCTCCGCCATCTCGGCCGCTTGGGCGACCGCGAACTCCGCCTCCACTTCCTCCATGTTGAAGCC-GGAGCC
AGCGCTAGCGCTAGCTCCA---------------GCTCCAGCTCCTCCGCCT--CGTCCTCCTTTGAATCCGCCACCTCC
ATCGGAGCCGGCTCCAGCTCCTCTCCCTCCC------------CCTCCTTCGCCTGCTCCTGCTCCTCCGGCTCCGGCGA
GTCCTTAAGCAACCCGACAGCGATGCGGGCGATGCGCGTGGCGTGCCTCG-CTCAAACTCC-TGCTCGATCTCGTACCAG
TGCTCCGGCATGAGGATATCGTACGTGGTTATCTTTTGCCGAACCATG----GCGAAGTCGGAGAGCATGGGAAGA-TGG
CAGAGCGGGAGAGAGGAGGTGGATGGGCTCGGGCCGGCGGCGCGGAGAGGGAGGAGGTGGATGTGGCTAGGGTTGAG-GG
ACGCCGGCCGACTTAAATAGCCGGATTTGGCCTCGGGCAGCGAGCTGGAGCCGCGCCATGCGGCATTCACA---C-CCGC
-ATCGGAGGAGACGTCTGTCGGATCGCTGGGTTTTCGGGCGATTCCGTGTGGGACCC--ATCGCCATTCCGACGTGGCGG
ACACG---CCCGGAC-----------------------------------------------------------------
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>chr3B_34
---------------------------------CTGTCGGTTGGCATCCACATAGGCCTCATCCTGGATGGA-----GGA
TGACCTGTTGCTCCGCCATCTCGGCCGCTTGGAAGACCGCGAACTCCGCCTCCGCGTCCTCTATATTGAAGCCTGTAGCC
G------GCGCCAGCT-----------------------------------------CCTCCTCCGGATCCGCCACCTCC
ATCGGAGCCGGCTGCTGCTTCTCTT-----------------------------------TCCTCCTTCGGTTTTGGCGA
GTACGGAGGCAAGCCGACAGCGATGCGGGCGGCACGCCTCGC---------TCGGATCTCC-TACTCAATCTGGTATCGG
CGCTCCGGCGTGAGCATGGCATAGGTGATCTTCTTTTGCTGAACCATG----GCGAAGCCGGAGGGCGTGGGAAGAGCGG
CAGAGCAGGAGAGAGGTGGCGGATGGGCTCGGGCTTGCGGCACGGAAAGGAAGAAGGTGGATCTGGCTAGGGTTGGG-GG
ACGCTGACCAGCTTAAATAGCCGGATTTGGCCTCAGACAGCGAGCCGGAGCGGCGCCACACGGCCTTCAAA---CACCCC
-ACCGGAGGAGACG------------------------------------------------------------------
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>chr5D_38
-------------------------------------CGGTTGGCCTCCACATAGGTCTCATCCTCGATAGACTCCATGA
TGGCCTGCTGCTCCGTCATCTCGGCCGTTTGGGCGACCGCGAACTCCGCCTCCGTGTCCTCCATATTGAAGCCCGGAGCC
G------GAGCGGGCGCCA---------------G---------------CT--CGTCCTCCTCCGGATCCGCTACCTCC
ATCGGAGCCGGCTGGTGCTCCTTTTCCTCCT------------CCGCCTCTGGCTGCTCCTCCTCCTTCTGCTCCGGCGA
ATCCGGAGGCAAGCCGAACGCGATGCATGCGGCGCACCTTGC---------CCGGATCTCC-TGCTCAATCTGGAACCGG
TGCTCCGGCCTATGCATAGCATAGGTGGTCTTCTTTTGCCGAACCATGCATGGCGATGCCGAACGGCATGGGAAGAGTGA
GGGAGTGGGAGAGAGGTGGTGGACGGGCACGGGTTAGCGGCGCAGAGAGGGAGGAGGTGGATGTGGCTAGGGTTGGG-GG
ACGTCGGCCATCTTAAATAGCCGGATTTGGCTTTGGGCGACGAGCCAGAGCTACGCCACGTGGCGTTCACA---C-CCCC
CACCAGAGGCGACGTCCGTCAGACCGCCAGGTTTCCGGGCGAATCCGTGTGGGACCAC-ATCGTCAGTCCGACATGGCGG
AGGCG---CACATCTGCCGCATATTTGGGCTGAATAT-AAGGGGTGTCAGTCAACCCGGCTGTTTGAGGCCCGT------
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>chr5A_40
---------------------------------------GTTGGCCTCGACATAAGCATCATCTTGGATGGACTCCAGGA
TGGCTTATTGCTCCGCCATCTTCGTCACTTGTGTGACCGCGAACTCCGCCATGGCGTCCTCTATGCCTAAGCCCGCAACC
G------GCGCCAGATCGT---------------CCCCCAGCTCCTCTGCCT--CGTCCTTCTCTGGATCCGCCACCTCC
TTCGAAACCGACTGTTGCTCCG---------------------------------GCTCCTCCTCCTTTGGCTCCAGCGA
GTCCGAAGGCAGACCGAC-----TGCAGGTGGCGCGCCTCGC---------CCAGATCTCC-TCCGCAATCTGGAACCGG
CGCTCCGGTGTGAGCATAGCATACGTCGTCTTCTTTTA-CGGGCCATG----GAGAAGTCAGACGGCTTGGGAAGAGCGG
CGAAGTGGGAGAGAGGTGG---ATTGGCTCGGGATGGCGGTGC-GAGAGGGAGGAGGTGGATGTGGCTAGGGTTGGG-GA
ACGCTGACCGACTTAAATATCTGGATTTGGCCTCAGGTGGTGAGCCGAGGCGGCGCCACGCGACGTTCACA---C-CCCC
-ACTGGAGGAGACG------------------------------------------------------------------
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>chr4B_802
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-GTTCGGTACATGAAATCTATGTATTTCCCCTATGGCGGATCTAGCGCGTAAGAACGGATGCAGGAAGATAATGAGCGGC
TGTGATTACACCCAGGCAAAGCGAGACAGCACAGCA---CAGCACAGCGCCTTATCCTCTAGGAGAGCACGCCTTGACGC
TCCGGCACCACCTGACCCGCCGCGCGCACCGCACACGGACGCTGCTGAACCGGGCACGCCATGGCCGCCGCCTCGCTGCT
CCACCTCGCGACCCCCATCTCCTCCCCGCGCCCCCACCTCGGCCACAACGC------CCTGCC------CCGCCGGCACC
ACCCGCGAGCGCGGCTGACGGCGG------------CGCGGGCGCACCGGGTGACGATCGAGCACGGCGGCGAGTCGCGG
GTGGTGGAGATGGAGGAGGAGGAGAACATCCTGGAGCGCGCGCTGGAGGAGGGGCTGGACGTGCCGCACGACTGCAAGCT
CGGGGTGTGCATGACCTGCCCGGCGCGGCTGGTGTCCGGCAGGGTGGACCAGAGCGACGGCATGCTCAGCGACGACGTGG
TCGCGCAGGGCTACGCGCTGCTCTGCGCCGCCTACCCGCGCTCCGACTGCACCATCCGCGTCATCCCCGAGGACGAGCTG
CTCCGGGTCCAGCTCGCCACCGCCAACGACTGACCCCCACC-----------CCTCACGCCGGCCGGCCGCCGGC-----
---------------------GTTCATGTGCTCCAAGGCTTTGTACAATGTATCTCACAAGCCATTGCAATAAGAGATGC
-TTTTTTTTGCCTAATATAATCAGCTGCTTCAGTTGTTGCCTGAACAATCTGTGAACATTCCTGCTTGTCATGCTTGAAA
CATTGGTTCGGCGATAACCCGAACATCAGCGAAATCGAAAGATTTCATGCGAAGGCGAATCGACAGATTTGATGTGAAGG
---CGAATCGAAAGATTTGATGGGCGAG-AGCACATCATTTGTGATAC--------------------------------
-------------------------------------------------------------------------------G
TACTAATTTAACTTGATGTTGTAACACACAGCACGAGTTCAGATTC--AGTCTCAGACATGCATATCCAGATTACAGGCA
TGGGGAGCATATAGATAGATATAGGTAGCAAGGTCATTATTTATTTGGGAGTAGAGCATGGCACTGGATGTTTTCTCTCA
GATA-TGCAGCTTCCATCATCTTCAGCCTCGAGGTGGGTAATCACTACCTGCAACCAAGCAAGCAAAATTTGT----TGG
ATCAGTGTAACCCAGTACTCACATGC-AGAAAGAAAAACTGACAGTGCTTCAGCATA-----ACAGCCTAGCAGCTCCCT
GCTTAGTTTGCCGCAGCGGCGGCGGAAAACCGCCGGTGCAATTTAAGCTCGGGGAATTCATTTCGGAAACGGTAGGCGCG
GGCACAGCTTGCGATGGGTTTTCAACTGCAACATCAGTTGCTACTTACATGGGTGTCGCAGAAGTAGAAGGTGTTTCGTG
CTCGCGGCACGTTACTTGTCGCCTGGGCTCGAGCTTGTGACTTCTAGACCATTGCCTGCGGTAGAGGTAGAACCAAGCTG
TCAACGATGGTTGAGGTGTGGATGCTGTTGGAATGGACT
>chr4D_827
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--------------------------TCCCGTGAGGCGGATCTAGCGGTTAAGAATGGATCCAAGAAGATAATGAGCGGC
TCTGATTACGCCAAGGCAAAGCGCGACAACACAACACAGCAGCACAGCGCCTTATCCTCTAGCTAGCA------------
-----CACCACCTGCCCTGCCGCGCGCACCGCACACGGACGCTGCTGAACCGGGCACGCCATGGCCGCCGCCTCGCTGCT
CCACCTCGCCACCCCCATCTCCTCCCCGCGCCTCCACCTCGGCCACAACTCCGCCACCAGCCTACCCCGCCGGCAGCATC
ACCCGCAGGCCCGGCTGACGGCGGCGCCGCACCCGCCGCGGGCGCACCGGGTGACGATCGAGCACGGCGGCGAGTCGCGG
GTGGTGGAGATGGAGGAGGACGAGAACATCCTGGAGCGCGCGCTGGAGGAGGGGCTGGACGTGCCGCACGACTGCAAGCT
CGGGGTGTGCATGACCTGCCCGGCCCGGCTGGTGTCCGGCAGGGTGGACCAGAGCGACGGCATGCTCAGCGACGACGTGG
TGGCGCAGGGCTACGCGCTGCTCTGCGCCGCCTACCCGCGCTCCGACTGCACCATCCGCGTCATCCCCGAGGACGAGCTG
CTCCAGGTCCAGCTCGCCACCGCCAACGACTGACCGACCCCTCCCCTCATCTTCCCACGCCGGCC-----------ACCT
CGCGCGGCGTCGATCGGCAGAGTTCATGTGCTCCGAGGCTTTGTACAATGTATTTCACCAGCCATTGCAATAAGATGTTT
-CTTTTTTTGCCTA--ATAATCAGTTGCTTCAGCTGTTGCCTGAACAATCTTCAAACATTCCTGCTTGTCATGCTTGAAA
CATTGATTCGGCGATAACCGGAACATTAGCGAA--------------------------TCGAAAGATTTCATGTGAAGG
CGACGAATCGAAAGATTTGATGAGCAAG-GGCACATCATTTGTGGTA---------------------------------
-------------------------------------------------------------------------------G
TACTAATTTAACTTGATGTTCTAACACACAGCACAGGTTCAGTACTTGAGTCTCAGACATGCATATCCATATTACAGGCA
TGGGGAGC----AGATAGATATAGGTACCAAGGTCATTATTTATTTGGGAGTAACGCATGGCACCGGATGTTTTCTCTCA
GATTCTGCAGCTTCCATCATCTTCAGCCTCGAGGTGGGC-ATCACTGCCTGCAACCAAGCAAGCAAAATTTGT----TGG
ATCAGTGTAAC-CAGTACTCAGATGC-AGAAAGAAAAACTGACAGTGCTTCAGCATA-----GCAGCCTAGCTGCTCCCT
GCTTAGTTTGCCGCAGCGGCGGCAGAAAACCGTCGGTACAATTTAAGCTCGGGAAATTCATTTCGGAAATGGTAGGTGCC
GGCACAGCCTGCAATGGATTTTCAACTGCAACATCAGTTACTACTTACATGGGTGTCGCAGAAGTAGAAGGTGTTTCCTG
CTCCCAGCAGGTTACTTATCGCCTGGGCTCGAGCTTGTAACTTCTAGACCATTGCCTGCAGTAGAGGTAGAACCAAGCTG
TCAGTGATGGTTGAGGTGTGGATGTAGTAGGAATGGACT
>SNPs
---------S-----------------------------------S----------------SS----------------
------------------------------------------------------------S-------------------
---------SS--S---------------------S---SS-----S--S--SS-----------------------S--
----------------------------------S---------------------S--------S--------------
------------------------S-----------S---------------------S---------------------
--------------------------------------S-S---------------------------------------
--------------------S---------S-----S--------------S----------------------------
---------------------S----------------------------------------------------------
--------------S----S-----S-----S-----SS-----S------S--SS-----S----------------S-
---------------S----------S--S-----SSS-----S-S--S-----S--S-S--------------S--SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S-----------S----S------------S------------------------------S------SS----------
S-----------------------------------S-------------------------------------------
---------------------S--------------SS----S-SS-------------------------S--------
---------------------------S--------S----------S--------S-------------S----S--S-
-S-------S----------------S-----------------------------------------------------
--------------------------------------S-----------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S------------------S----S----
----------------------------------------S-------------------------S----------SS-
S-----------------------------------------------------SS-------------S----------
---------S---------------------------------------------------------------S------
----------------------------S--------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-----S-------------------------------------S--SSSSSSS-----------------------S---
-----------------------S----S------S----------S----------------------------S----
S-------------------------S-------------------------------S----------SSS-SSSS---
-------------S-------SS---S------------------SS----------SSSSS--------S---------
-------------SS--S--S---S----------S----------------------SS--------------------
--------------------S--------------------S--------------------------------------
-------------------------------------------------------------------S------------
---------------------------------------
>forward_821
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-GTATTTTTGTGACCGGGCCG-----------------------------------------------------------
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>reverse_1889
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------------------------------------------------TCCCTCCGTCCGGAAATACT------------
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---------------------------------------
