>input_sequence_80190
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------ACACCCAGCGCAAACTCACAC
GAGCTCA----------------CACAAGCTAGTAAGCCAGCCCACACGAGCTCCATCGACCATCGGATGGGGTCCTTCG
CCAGAGCTGCCCGTTTCCTGGTGCTCCTCCAGATCGTCCTGTTCGTCATCTCCGCCGTGCTCATGAGCGGCCCCGTCTGC
CATGGAGCCCGCCCAGGGATCAGTGGTTAGTGCTTACAAACTGTTCATTCCATCCTCTCA--GTCTCCTAGCTAC-----
--------------------------------------------------------------------------------
-----------------------------GTACTTGAAAAAAGGTTTTTATACTAGCCTTCTGAAATTTAGT--------
-----------------------------------------------------------------AGGAGTAGTTACTTG
CAACTGAATATCCATGGATGCTTG-TTTTTTCCTTCCAGGTGGAGCTCTCGACCCTAACCGGCCAACAGTTACAGTTCCG
CCTGGTGACCCCTACACCGGTCGTCGGTGCGGCAGCTTGTACAGGTGCCCACCAGGTGTTCAGCCCTGA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr7D_1_TraesCS7D01G354200
GTGCTTAGCACCGTTTCTTCCTGGATGACCATAATGCTCTCTCTTCTTTTTAATTGCTTTGTCACATCACCTTTTACCTA
TGTGGCGTCCTTAGTATCTATACACCTTGAAGCACTGGGAATTGTGAAGGGCCTAAAGAAAAGAGCTAGGCTGTAGTGTG
ACAACCTGAGGCGACGCCGGCGATTGGATATTTTCCTTGGTAT--GGCACATAAGACGACCGG----AGACCCGGTTGGT
TTACCGGGAGTCGTCATCGTG---GCC---------CTGTTGGTTCGCTGGTCGTTGATCACTTTTTCTTCCACGGCCAA
GGTGTCACCAGGCACCAGCCTTGACTAACCGGAGAAAACCCAGCCATGGCTTCTGCCCAGTGCCCACCAGGACGAGTGCG
TTTGATCTTCAGCAGCGACATGCACCTACGCACAGTCTACCACTCATGTGCACAGTGCACGC-CCCATCTCTCGCTCGGA
CTACTCCCTCGTTTGGAATTACTTATCTCGGATGTATCTAGAACTAAAATACGTCTAGATACATCCATTTCTGCGACAAG
TAATTCCGAACGGAGGGAGTATGTGCTAGAAATTTTGATGCCTGTAAAAAAGTTAGGTCTTCTTTGGTTCATAGGGTAGG
AAAATCGTAGGAATAGGAAAGTCATAGAAAATGAGATGACATGTATCTCAAATTTTATGAGTAGGAATAGGAAAGGAGAT
GCCCTTTGATTCACGTCATACGATTTTTTCCATTGTGTCTAGGCTAATGTTTATTTTCCTATGAAATGTGGAGGATAGAA
AGAATTCCTCCATAAGAATAGGATTCCATTCCTACAAACCAAAAGGCTCTAAAGGAATTTTTCCTATAGAAATCCTATCC
TATGAAATTCTTATAAAATTCCTCTAAACCAAAGGAGGCCTTAGTGGAAATTGAGGGGCCAGTGGCCACTGTGATATTTT
TTTCTCTCCATCAGGATCATGTCCGTCTATAAATACCACCCTCCGGTAAACAGCAGGACACACCCAGCGCAAACTCACAC
GAGCTCA----------------CACAAGCTAGTAAGCCAGCCCACACGAGCTCCATCGACCATCGGATGGGGTCCTTCG
CCAGAGCTGCCCGTTTCCTGGTGCTCCTCCAGATCGTCCTGTTCGTCATCTCCGCCGTGCTCATGAGCGGCCCCGTCTGC
CATGGAGCCCGCCCAGGGATCAGTGGTTAGTGCTTACAAACTGTTCATTCCATCCTCTCA--GTCTCCTAGCTAC-----
--------------------------------------------------------------------------------
-----------------------------GTACTTGAAAAAAGGTTTTTATACTAGCCTTCTGAAATTTAGT--------
-----------------------------------------------------------------AGGAGTAGTTACTTG
CAACTGAATATCCATGGATGCTTG-TTTTTTCCTTCCAGGTGGAGCTCTCGACCCTAACCGGCCAACAGTTACAGTTCCG
CCTGGTGACCCCTACACCGGTCGTCGGTGCGGCAGCTTGTACAGGTGCCCACCAGGTGTTCAGCCCTGATACCCGCACAA
ACACCTGTCCCGAACAATGGACG--------GATTGCACCGCCTGGATGCATGCCTTCATCTAGTTATAGCAGTACAAGT
TGTTGGAATATTAGGCAAGTTCATGATTAATTCCAGTAAATAATTCATGACTAGAAGAGATACTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACATAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGACAGTGTTGATGACGATGTTGGCGACGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACAGAAGACGACCCGTGATGACGAATTTGAGCAGTCGTGCACAGC
GCTTCCCAAAAACCTAATTCGTCCTCTCCCGGTGCAGGATCGCAAAGACGAACGGTTCCGGAGACCTGCTCTCCCACGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGTTGTGAGATGAGGCAAAACCCTAGGTGTTT
TT-CGGTGTGTCTCTGGCCGCAGCCGGTAGCTGTATATA--TATTAGGACCAGAGGCGGTATTGTGTCGCGACCACAATC
CCAAACCGACTCGGTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAC
GGCAAAAGGAAGCTGCACTCCTGCAAGGAGACGGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCGC-
----CGCCACGCCACGCCACGCCACGCCACGGCCCGGCCCGGCCCGGCCCGGCCCGGCCAGGCGAGGCGAGGCGAGCGAG
CGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAACCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>chr7B_133
--------------------------------------------------------------------------------
----------------------------------------------------CTAAAGAAAGGGGCTAGGCTGTAGTGTG
ACAACCTGAGGCGACGCCGGCAAATGGATATTTTCCTTGGTATATGGCACATAAGACGACCGG----AGACCCGGTTGGT
TTACCGGGAGTCGTCGTCCTCGTCGTCGCCCTGTTGCTGTTGGTTCGCTGGTCGTTTATCACTTTTTCTTCCACGGCCAA
GGCGTCACCAGGCACCAGCCTTGACTAACCGGAGAAAACCCAGCCATGGCTTCTGCCCGGTGCCCACCAAGACGAGTGCG
-TTGATCTTCAGCAGTGACATGCACCTACGCACAGTCTACCACTCATGTGCACAGTGCACGC-CCCGTCTCTCGCTCGAA
ACG-----------------------------------------------------------------------------
--------------------ATGTGCTAGAAAC-TTGATGCCTGTAAAAAGG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTAGTGGAAATTGAGGGGCCAGCGGGCAGTGTGATC-TTT
TTTCTCTCCATCAGGATCATGTCCGTCTATAAATACGACCCTCCGGTAAACAGCAGGACACACCCAGCGCAAACTCACAC
GAGCTCA----------------CACAAGCTAGTAAGCCAGCCCACACGAGCTCCATCGACCATCGGATGGGGTCCTTCG
CCAGAGCTGCGCGTTTCCTTGTGCTCCTCCAGATCGTTCTGTTCGTCATCTCCGCCGTGCTCATGAGCGGCCCCGTTTGC
CATGGAGCCCGCCCAGGGATCAGTGGTTAGTGCTTACGAACTGTTCATTCCATCCTCTCGTCGTCTCTAGCTCCGTACTT
CCTCCGTCCAAAAATACTTGTCATGGAAATGGATGTATCTAGACGTATTTTAGTTCTAGATATATCCAATTTTATCTATT
TGTGCGACAAGTATTTCCGGACGAAGGGAGTACTTGAAAAAAGGTTTTTATACTAGGCTTATGAAATTTAGT--------
-----------------------------------------------------------------AGGAGTAGTTACTTG
CAACTGAATATCCATGGATGCTTGTTTTTTTCCTTCCAGGTGGAGCTCTCGACCCTAACCGGCCAACAGTTACAGTCCCG
CCTGGTGCCCCCTACACC---CGTCGGTGCGGCAGCTTGAATAGGTGCCCACCAGGTGTTCAGCCCTGATACCCGCACAA
ACACCTCTCCCGAACAATGGAAG--------GATTGCACCGCCTGGATGCT----TTCATCTAGTTATAGCAGTACAAGT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr7A_133
--------------------------------------------------------------------------------
----------------------------------------------------CTAAAGAAAGGGGCTAGGCTGTAGTGTG
ACAACCTGAGGCGACGCCGGGCATTGAATATTTTCCTTGGTAT--GGCACATAAGACGACCGGCCGGAGATCCGGTTGGT
TTACCCGGAGTCGTCGTCGTCGTCGCC---------CTGTTGGTTCGCTGGTTGG---TCACTTTTTCTTCCACGGCCAA
GGTGTCACCAGGCACCAGCCTTGACTAACCGGAGAAAACCCAGCCATGGCTT---------------------GAGTGCG
TTTGATCTTCAGCAGCGACATGCACCTACGCACAGTCTACCACTCATGTGCACAGTGCACGCGCCCATCTCTCGCTCGAA
ACG-----------------------------------------------------------------------------
--------------------ATGTGCTACGAAC-TTGATGCCTGTAAAAAAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TTAGTGGAAATTGAGGGGCCAGTGGCCACTGTGATCTTTT
ATTCTCTCCATCAGGATCATGTCCGTCTATAAATACGACCCTCCGGTAAACAGCAGGA-------------AACTCACAC
GAGCTCATGAGCTAGCAAACTCACACGAGCTAGCAAACCAGCCCACACGAGCT-------CCATCGGATGGGGTCCTTCG
CCAGAGCTGCGCGCTTCCTGGTGCTCCTCCAGATCGTCCTGTTCGTCATCTCCGCCGTGCTCATGAGCGGCCCCGTCTGC
CATGGAGCCCGCCCAGGGATCGGTGGTTAGTGCTTACAAACTGTTCGTTCCATCCTCTCGTCGTCTCCTAGC--------
--------------------------------------------------------------------------------
------------------------------TACTTGAAACAAGGTTTTTATACCAGCCTTCCGAAATTTAGTACTCCCTT
CGTCCCATAATATAAGAGTGTAGTGTTAAAGAAAAAAAAACGCTTTTATATTATAAGACGGAGGGAGTAGTAGTTACTTG
CAACTGAATATCCATGAATGTTTGTCTTTTTCCTTCCAGGTGGAGCTCTCGATCCTAATCGTCCGACGGTTACAGTGCCG
CCTGGTGACCCCTACACCGGTCGTCGGTGCAGCAGCTTGTACAGGTGCTCACCAAGTGTTCAGCCCTGATACCCGCAGAA
ACACCTCTCCCGAACAATGGAAGGTGTTGACGATTGCACCGCCTGGATGCATGCCTCCATCTAGTTAGCAATACAAG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr2D_1527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TGATGAAATATTAGGCAAGTTCATGATTAATTCCAGTAAATAATTCATGACTATAAGAGATACTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGACAGTGTTGATGACGATGTTGGCGACGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGACGAATTTGAGCAGTCGCGCACAGC
GCTTCCCAAAAACCTAATTCGTCCTCTCCCGGTGCAGGATCGCAAAGACGAACGGTTCCGGAGACCTGCTCTCCCACGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGTTGTGAGATGAGGCAAAACCCTAGGTGTTT
TT-CGGTGTGTCTCTGGCCGCAGCCGGTAGCTGTATATATATATTAGGACCAGAGGAGGTATTGTGTCGCGACCACAATC
CCAAACCGACTCGGTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAC
GGCAAAAGGAAGCTGCGCTCCTGCAAGGAGACGGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCGC-
----CGCCTCGCCTCGCCTCGCCTCGCCTCGCCACGCCACGGCCCGGCCCGGCCCGGCCAGGCGAGGCGAGGCGAGCGAG
CGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAACCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>chr2D_1527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TGTTGGAATATTAGGCAAGTTCATGATTAATTCCAGTAAATAATTCATGACTAGAAGAGATACTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGACAGTGTTGATGACAATGTTGGCGACGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGACGAATTTGAGCAGTCGCGCACAGC
GCTTCCCAAAAACCTAATTCGTCCTCTCCCGGTGCAGGATCGCAAAGCCGAACGGTTCCGGAGACCTGCTCTCCCACGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGTTGTGAGATGAGGCAAAACCCTAGGTGTTT
TTCCGGCGTGTCTCTGGCCGCAGCCGGTAGCTGTATATATAT--TAGGACCAGAGGCGGTATTGTGTCGTGACCACAATC
CCAAACCGACTCGGTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAT
GTCAAAAGGAAGCTGCGCTCCTGCAAGGAGACGGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCGC-
----CGC-----CTCGCCTCGCCTCGCCACGGCCCGGCCCGGCCCGGCCCGGCCCGGCCAGGCGAGGCGAGGCGAGCGAG
CGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAACCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>chr5D_1527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TGTTGGAATATTAGGCAAGTTCATGATTAATTCCAGTAAATAATTCATGACTAGAAGAGATACTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGACAGTGTTGATGACGATGTTGGCGACGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGACGAATTTGAGCAGTCGCGCACAGG
GCTTCCCAAAAACCTAATTCGTCTTCTCCCGGTGCAGGATCGCAAAGACGAACGGTTCCGGAGACCTGCTCTCCCACGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGTTGTGAGATGAGGCAAAACCCTAGGTGTTT
TT-CGGTGTGTCTCTGGCCGCAGCCGGTAGCTGTATATATAT--TAGGACCAGAGGCGGTATTGTGTCGCGACCACAATC
CCAAACCGACTTGGTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAC
GGCAAAAGGAAGCTGCGCTCCTGCAAGGAGACAGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCGC-
----CGCCTCGCCACGGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCCCGGCCAGGCCAGGCGAGGCGAGGCGAGCGAG
CGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAACCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>chr3D_1527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TGTTGGAATATTAGGCAAGTTCATGATTAATTCCAGTAAATAATTCATGACTAGAAGAGATACTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGACAGTGTTGATGACGATGTTGGCGACGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGAAGAATTTGAGCAGTCGCGCACAGC
GCTTCCCAAAAACCTAATTCGTCCTCTCCCGGTGCAGGATCGCAAAGATGAACGGTTCCGGAGACCTGCTCTCCCACGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGTTGTGAGATGAGGCAAAACCCTAGGTGTTT
TT-CGGTGTGTCTCTGGCCGCAGCCGGTAGCTGTATATATAT--TAGGACCAGAGGCGGTATTGTGTCGCGACCACAATC
CCAAACCGACTCGGTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAC
GGCAAAAGGAAGCTGCGCTCCTGCAAGGAGACGGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCGC-
----CGCCTCGCCTCGCCTCGCCACGCCACGCCACGGCCCGGCCAGGCCAGGCCAGGCCAGGCGAGGCGAGGCGAGCGAG
AGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAATCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>chr1D_1527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TGATGGAATATTAGGCAAGTTCATGATTAATTCCAGTAAATAATTCATGACTAGAAGAGATACTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGATATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGACAGTGTTGATGACGATGTTGGCGATGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGACGAATTTGAGCAGTCGCGCACAGC
GCTTCCCAAAAACCTAATTCGTCCTCTCCCGGTGCAGGATCGCAAAGACGAACGGTTCCGGAGACCTGCTCTCCCACGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGTTGTGAGATGAGGCAAAACCCTAGGTGTTT
TT-CGGTGTGTCTCTGGCCGCAGCCGGTAGCTGTATATATAT--TAGGACCAGAGGAGGTATTGTGTCGCGACCACAATC
CCAAACCGACTCGGTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAC
GGCAAAAGGAAGCTGCGCTCCTGCAAGGAGACGGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCGC-
----CGCCTCGCCTCGCCTCGCCTCGCCACGCCACGCCACGCCACGGCCCGGCCCGGCCCGGCCAGGCGAGGCGAGCGAG
CGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAACCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>chr7D_1528
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TGTTGGAATATTAGGCAAGTTCATGATTAATTTCAGTAAATAATTCATGACTAGAAGAGATACTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTATCTATTATGGGTGCGACAGTGTTGATGACGATGTTGGCGACGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGACGAATTTGAGCAGTCGCGCACAGC
GCTTCCCAAAAACCTAATTCTTCCTCTCCCGGTGCAGGATCGCAAAGACGAACGGTTCCGGAGACCTGCTCTCCCATGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGTTGTGAGATGAGGCAAAACCCTAGGTGTTT
TT-CGGTATGTCTCTGGCCGCAGCCGGTAGCTGTATATATAT--TAGGACCAGAGGCGGTATTGTGTCGCGACCACAATC
CCAAACCGACTCGGTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAC
GGCAAAAGGAAGCTGCGCTCCTGCAAGGAGACGGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCCT-
----CGCCTCGCCTCGCCTCGCCTCGCCACGGCCCGGCCCGGCCCGGCCCGGCCAGGCCAGGCGAGGCGAGCCGAGCGAG
CGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAACCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>chr4D_1528
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TGTTGGAATATTAGGCAAGTTCATGATTAATTCCAGTAAATAATTCATGACTAGAAGAGATACTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGAGAGTGTTGATGACGATGTTGGCGACGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGACGAATTTGAGCAGTCGCGCACAGC
GCTTCCCAAAAACCTAATTCGTCCTCTCCCGGTGCAGGATCGCAAAGACGAACGGTTCCGGAGACCTGCTCTCCCACGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGGTGTGAGATGAGGCAAAACCCTAGGTGTTT
TT-CGGTGTGTCTCTGGCCGCAGCCGGTAGCTGTATATATAT--TAGGACCAGAGGCGGTATTGTGTCGCGACCACAATC
CCAAACCGACTCGGTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAC
GGCAAAAGGAAGCTGCGCTCCTGCAAGGAGACGGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCGC-
----CGCCTCGCCTCGCCACGCCACGCCACGGCACGGCACGGCACGGCCCGGCCCGGCCAGGCGAGGCGAGGCGAGCGAG
CGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAACCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>chr2D_1528
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TGTTGGAATATTAGGCAAGTTCATGATTAATTCCAGTTAATAATTCATGACTAGAAGAGATAGTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGACAGTGTTGATGACGATGTTGGCGACGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGACGAATTTGAGCAGTCGCGCACAGC
GCTTCCCAAAAACCTAATTCGTCCTCTCCCGGTGCAGGATCGCAAAGACGAACGGTTCCGGAGACCTGCTCTCCCACGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGTTGTGAGATGAGGCAAAACCCTAGGTGTTT
TT-CGGTGTGTCTCTGGCCGCAGCCGGTAGCTGTATATATAT--TAGGACCAGAGGCGGTATTGTGTCGCGACCACAATC
CCAAACCGACTCGGTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAC
GGCAAAAGGAAGCTGCGCTCCTGCAAGGAGACGGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCGCT
GCCTCGCCTCGCCTCGCCACGCCACGCCACGCCACGGCCCGGCCCGGCCCGGCCCGGCCAGGCGAGGCGAGGCGAGCGAG
CGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAACCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>chr5D_1528
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TGTTGGAATATTAGGCAAGTTCATGATTAATTCCAGTAAATAATTCATGACTAGAAGAGATACTAGCATGCAATAATCTA
GCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAACAGAGGA
TGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGACAGTGTTGATGACGATGTTGGCGACGATCTGCTGCTGACGGCG
ATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGACGAATTTGAGCAGTCGCGCACAGC
GCTTCCCAAAAACCTAATTCGTCCTCTCCCGGTGCAGGATCGCAAAGACGAACGGTTCCGGAGACCTGCTCTCCCACGCG
CCGATGCACGCCGGCGTTTGGGATGGAGTAGACTACGATGGCGGCGCAAGTTGTGAGATGAGGCAAAACCCTAGGTGTTT
TT-CGGTGTGTCTCTGGCCGCAGCCGGTAGCTGTATATATAT--TAGGACCAGAGGCGGTATTGTGTCGCGACCACAATC
CCAAACCGACTCGTTTTCTAATTCGTATACTTACCGGACAAGAAATCAAAAACTTGTCTGCCAAGACATAAAAATAAAAC
GGCAAAAGGAAGCTGCGCTCCTGCAAGGAGACGGACCGGATTTCGGCGGACCATTCACGCGCATGTCGCATGTACGCGC-
----CGCCTCGCCTCGCCACGCCACGCCACGGCC----------CGGCCCGGCCCGGCCAGGCGAGGCGAGGCGAGCGAG
CGCGCGCGTGTGGTTTTCCCTTTCTCTTCTCACACACCACTTAGAGTGGTGGAGAGAACCCACTATATAAAGAGGTCCAA
CTCTTCTTCAACTTCCAAGGTGGGACTAAACTTAGCACCACCACT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-S----------------
---------------------S----------------------------------------------------------
---------------S----S-----------------------------------S-----------------------
----------------------------------------------------------S----------S----------
------------------------------------------------------------------------------S-
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------SS------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------S----
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-----------------------------------------------------------S------------SSS-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
------S--------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
-------------------------------------S----------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>forward_496
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CGGA
CTACTCCCTCGTTTGG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>reverse_2038
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AGAAGACGACCCGTGATGAC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
