>input_sequence_80188
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-------------ATGGAGAGCGGGGGCGCGAGGGAGCAGCAGCCATGGCGCTACAGCTGCAACTTCGCGTGGCCGCCGC
GCTCCTACACCTGCAGCTTCTGCAAGAGGGAGTTCCGGTCCGCGCAGGCCCTCGGTGGCCACATGAATGTCCACCGCAGG
GACAGGGCCAGGCTCCGCCACGGCTCCCCACCT---CCTCCTCCTCAGCTTGCTGCTGCTGCTGG---------TGGAAG
CCCTAACCCTAGACGGGC------AGCAGCAGCAGCAGCCATCCCCAACCTCAACTATCCTCCTCCACCACCGGC---GC
CGCAGCCATCCCTGTACAATGAGCGCTCGTCGGCGGCTGCGGCGGACACGAGGGCGTTAGAGTTGAGCCTGGAGCTAGGG
TTGGAGGCTGGTGTGCAGTCCTGCACCAAGGAGGAAGATGATGGTCTGGATCTTGAGCTTAGGCTCGGCTGCTCTTGA--
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-----------------------------------
>chr7D_1_TraesCS7D01G127000
ATTTCCATGTTGGTTTGTACCTCTCCACTCGAGTGG----CTGTTC----CATTCATGCTAGCACAGTACGTAGCACTTG
GTTGCTCACACGTCAGGATACATCCACGCAGAGAAATTAAGGGAGGCAATGAAAGCAAGAAAAA-TCATGGAGACAGAGG
TGATAAACCCTTCAAAACCTTGCTATACGTACGATCAACTCCCGTCCAACATGTACGATTGAAGACAAAATGTAGATGAT
CCAGTTTGTGGGCCATAGCATTTGCAGTCTGGTCGTATAGCTATCCAACAAAAATTAATCGTACGCAGAGCTGTTTCGTA
AACCCCTTAGGCATATATCATATATGCAGTCAAA-TTTCCAGCTAGCCTGTGAGGAGCTTGGATTGCACGTGGTCAA---
GCTGCATGCTTGGAGAGAGACCGGCCGCTTGCAAAGCTGCTGGATGCTGGACTGGAGTGGCACTGCGGTTTGTTGTCCGG
GGAAAGATTTTGCTGGGCACGTTTGACAAAGGGGAGATGGCATTACCGAGGTGTCCATTTCTGGGTCGGTTGAATGGCCC
GGTCACGCACGCACCTGGCCCCGCATGCCAAGCACAAAACAGTGAAACGCAACTAGTACATGCGTGCGTGCGTGCAT---
-----GATCTACAGTGGCCTCCCCTGTTCCCGGCCAGGACTCTGTCGCTCATCATCTCCTGTGCATGCTGCTAGAGAGAG
AGAGA------GAGAGAGAGAGAGAGAGAGATTGACTGAGACTGAGAGTATGTGTATGGCTAGCCAAGTCCATCGCTATG
ATAGCACTGCCCAGGGGAGAGAGAGAGAG-------AGATAGAGAGAGAGACTG----GTGTGTGATGGACTGGGACATG
AAAGTGACCAGCAAGAACAGCCAGTGGC----CATCAAGCTTTA----C-CTGTGTCGCCAGTACAAATACCCAGTGCCG
CTTCACTTCACTTGCCTTG--CCATACATCCATCCAGCCCTCTTCTACCTTCGCTAG----GCTAGCTACTTCTGTAAGG
CTCGATCGACACCATGGAGAGCGGGGGCGCGAGGGAGCAGCAGCCATGGCGCTACAGCTGCAACTTCGCGTGGCCGCCGC
GCTCCTACACCTGCAGCTTCTGCAAGAGGGAGTTCCGGTCCGCGCAGGCCCTCGGTGGCCACATGAATGTCCACCGCAGG
GACAGGGCCAGGCTCCGCCACGGCTCCCCACCT---CCTCCTCCTCAGCTTGCTGCTGCTGCTGG---------TGGAAG
CCCTAACCCTAGACGGGC------AGCAGCAGCAGCAGCCATCCCCAACCTCAACTATCCTCCTCCACCACCGGC---GC
CGCAGCCATCCCTGTACAATGAGCGCTCGTCGGCGGCTGCGGCGGACACGAGGGCGTTAGAGTTGAGCCTGGAGCTAGGG
TTGGAGGCTGGTGTGCAGTCCTGCACCAAGGAGGAAGATGATGGTCTGGATCTTGAGCTTAGGCTCGGCTGCTCTTGATC
GATCGAGCATATGCATATCATTCTTCTCTAGTATAGCTAATT-----ACATCACTAGGTTGGTTCTCTAGTTAGT-----
-------------------TCTAGCAGTAGCTAGCTTAGTTCAAGCTATGAGAACAGCTGAATTGGTGTTTGCTTCATCG
CTTCTTCAGTGTATCATTAG-TCGGCTTTGATGTTTCAGCTAGCTAGGTATCTATGTAT--GGTCGTGTTCACTGTTTAA
TTAGGATGGTACCGCCCAGGGTGACCCATGATCTATGAAATCATTTTACTGTTGTTT-TTTCAGCATTGTCTCTCTCACG
TGGTGTAAATACTAGAAAAAT--AAATTTTATTTTTGTTT-GGTTTGGACCTTTGGCTACCCAAAGCAGACATACATTGC
GCCAAAAGGGATCGGGAAACTATATTATGACATGCTA------------------------------------AACTTGG
TAAAATCAAGCCCCAACACTAGCATACATAAA------------------------------------------------
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------------------------------TATAAAATTTCCAATGACTACATTGAGATTCATTTTGTACATCATAGTTT
GAAATGGCCAGGGAGGAAATCTGACTGACAAATGTTGAAGAAAATGGCGAAAGAACAGTTTGCTTTGTGCT--CACCACG
TAGCTACGCATGTTG-AAAAAAAATCAAAAAAAT-GTTGAAGAAAATAAGTTGGATACAAAACTATAGTGGGTAGAGCAA
AGATTGAACCCCTTATCAAATTCTTAGATAAATGATTTGTTGGACATGTCAGATTTGAACTGGGGGAGTTCCATGCATGC
TCAGCTAAGAGTGATTGTTAACAGAGTGGATTTTCTCCCGTGTATG---GAAGGTCCGTTCATGGACTAGTCCATTGATT
ATTTTGGGTCGACCCCTGCATGCAATTTTTGGTAGAGATGGCATGCTCCACCCATCCAACTTCCTTGATTTTTATTTTAG
CATTCAAATTTGAATCTATTGTATCTTCTGAACTGAAAGTCCAATTTTTGTTTCGTTTGCGTATTTGTGTTTCTTGCGAC
GAGGGCTTTCAAATAATAGCAATCTTGAATACATT
>chr7A_1
ATTTCCATGTCGGTTTGTACCTCTCCACTCGAGTGG----CTGTTTCATTCATGCATGCTAGCAGAGTA----GCGCTTG
GCTGCTCGATCACA----------CATGCAGAGAAATTAAGAGAGGCAATGAAAGCAAGAA-------------------
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-------------------ATATATGCAGTCAAA-TTTCGAGCTAGCCTGTGAG---CTTGGATTGCACGTGGTCAA---
GCTGCATGCTTGGAGAGAGA----CCGCGTGCAAAGCTGCTAGATGCTGGACTGAAGTGGCACTGCGGTTTGTTGTCCAG
GGAAAGATTTTGCTGGGCACGTTTGACAAAGGGGAGATGGCATTACCGAGGTGTCCATTTCTGGGTCGGTTGAATGGCCC
GGTCACGCACGCACCTGGCCCCGCATGCCAAGCACAAAACAGTGAAACGCAACTAGTACA----TGCGTGCGTGCAT---
-----GATCTACAGTGGCCTCCCCTGCTCCCGGCCAGGACTCTGTCGCTCTCTCCATCGCCTG--TGCTGCCAGAGAGAG
GGAGAGAGCTT----------------------------GACTGAGAGTAT----GTGGCTACCCAAGTCCATGGCCATG
ATAGCACTGCCCAGGG----------GAG-------AGAGAGAGAGAGAGGCTA----CTGTGTGATGGACTGGGACATG
AAAGTGACCAGCAAGAACAGCCAGTGGCGGGCCACCAAGCTTACCTGTC-CTGTGTCGCCAGTACAAATACCCACTGCCG
CTTCACTCCACTTGCCATGACCCATACATCCAGCCAGCCCTCTTCTACCTTCGCTAAGCGCGCTAGCTACTTCTGTAAGG
CTCGATCGACACCATGGAGAGCGGGGGCACGAGGGAGCAGCAGCCATGGCGCTACAGCTGCAGCTTCGCGTGGCCGCCGC
GCTCCTACACCTGCAGCTTCTGCAAGAGGGAGTTCCGGTCCGCGCAGGCCCTCGGTGGCCACATGAATGTCCACCGCAGG
GACAGGGCCAGGCTCCGCCACGGCTCCCCACCCCCTCCCCCTCCTCAGCT------------TGCTGCTGCTGCTGGAAG
CCCTAACCCTAGACGGGC------AGCAGCGGCGGCAGCTATCCCCAACCTCAACTATCCTCCTCCTCCACCGTC---GC
---AGCCATCCCTGTGCAATGAACTCTCGTCGGTGGCTGCGGCGAGCACAGGGGCGTTAGGGTTGAGCCTGGAGCTGGGG
TTGGAGGCTGGTGTGCAGTCCTGCGCCAAGGAGGAGGATGATGGTCTGGATCTTGAGCTTAGGCTCGGCTGCTCTTGATC
GATCGAGCATATGCATAACA---TTCTCTAGTCTAGCTAATTACTGTACATCACTAGGTTGGTTCTCTAGTTAGT-----
-------------------TCTAGCAGTAGCCAGCTTAGTTCAAGCTATGAGAATGGCTGAATTGGTGTTTGCTTCATCG
TCTCTTCAATGTATTATTAGTTCGGCTTTGATGTTTTA---AGCTAGCTAGGTATCTAT--GGTCGTGTTTACTGTTTAG
A----ATGGTACTGCCTAGGGTGACCCATGATCTTTGATATCATTTTACTGTTGTTT-TCTCAGCATTGTCTCTCTCACG
TGGTGTTAATACTAGAAAAAT--AAATTTTATTTTTGTTTTGGTTTGGACCTTTGGTTACCCAACGCAGACATA--TTGC
CCAAAACGGGATCGGGAAACTATATTATAACAT---A------------------------------------AACTTGG
TAAAATCAAGCCCCAACACTACAATACATAAATACTACTCCCTCCGTTCCTAAATGTAAGTCTTATGAACTACATACAGA
TATACATAGAAGTAATTTAGAGTATAGATTCACTCATTTTCACTCATTTTTCTTCGTACGTAGTCCATATTGCAATCTTT
AAAAAGACTTATATTTAGGAACGGGGGGAGTATAAAATTTCCAATGACTAAACTGAGATTCATTTTGTATATCATAGTTT
GAAATGGCGAGGGAGGAAATCTGTTTGACAAATGTTGAAGAAAATGACGAAAGCACAGTTTGCTTTGTGCGCACACCACG
TAGCTG----TGTTG-AAAAAAAATCAAAAAAAAAGTTGAAGAAAATAAGTTAGACAGAAAACTATAGTGTGTGGTGCAA
AGGTTGAACACCTTATTAAATTCTTAGATGAATTTTTTGTTGGACATGTCAGATTTGAACTAGAGGAGTTCCATG----C
TCTGCTAAGAGTGATTGTTAAGAGAGTGGATTTTCTCCCATGCACG---GGAGGTCCGTGCATGGATTAGTCCATTGATT
ATTTTGGTTTAACCCCTGCATGTAATTTTTGGTAGAGATGGCATGCTCCACCCATCCAGCTTCATTGATTTTTATTTTAG
CTTTCAAATTTGAATCTATTGTATCTTTTGAACTGAAAGTCCAATTTTTGTTTCATTTGTGTATTTGTGTTTCGTGCAAC
GAGGGCTTCCAAATAATACCATTCTTGAA------
>chr7B_1
ATTTCCATGTTGGTTTGTACCTCTCCACTCGAGTGGATAGCTGTTC----CATTCATGCTAGCACAGTG----GCACTTG
GTTGCCCACACGTCAGGATACATGCACGCAGAGAGATTAAGAGAGGCAATGAAAGCAAGAAAGATTCATGGAGAGAGAGA
GAGAGACACACACACACAAACACACAGAGAGAGAGAGAGGTGAAACAAATCCCTTGCATAT-------------------
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-------------------ATATATGCAGTCAAAATTTCAAGCTGGCCTATGAG---CTTGGATTGCACGTGGTCAAGCC
GCTGCATGCTTGGAGAGAGA----CCGGTTGCAAAGCTGCTGGATGCTGGACTGGAGTGGCACTGCGGTTTGTTATCCAG
GGAAAGATTTCGCTGGGCGCGTTTGACAAAGGGGAGATGGCATTACCGAGGCGTCCATTTCAGGGTCGGTTGAATGGCCC
GGTCACGCACGCACCTGGCCCCGCATGCCAAGCACAAAACAGTGAAACGCAACTGGTACA----TGCGTGCGTGCATGCG
TGCATGATCTACAGTGGTCTCCCCTGTTCCCGGCCAGGACTCTGTAGCTCATCATCTCCTGTGCATGCTGCCAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGACTGAGACTGAGAGTAT----ATGGCTAGCCAAGTCCATCGCCATG
ATAGCACTGCCCAGGG----------GAGGAGAGAGAGAGAGAGAGAGAGACTAGCTAGTGTGTGATGGACTGGGACATG
AAAGTGACCAGCAAGAACAGCCAGTGGC----CATCAAGCTTACCTGTGTCTGTGTCGCCAGTACAAATACCCAGTGC--
----ACTCCGCTTGCC---ACTCATACATCCAGCCAGCTCCCTTCTACCTTCGCTAGGCTAGCTACTC---TCTGTAAGG
CTCGATCGACACCATGGAGAGCGGGGGCGCGAGGGAGCAGCAGCCATGGCGCTACAGCTGCAGCTTCGCGTGGCCGCCGC
GTTCCTACACCTGCAGCTTCTGCAAGAGGGAGTTCCGGTCCGCGCAGGCCCTCGGTGGCCACATGAATGTCCACCGCAGG
GACAGGGCCAGGCTCCGCCTCGGCTCCCCACCTCCCCCTCCTCCTCAGCTTGCTGCTGCTGCTGCTGCTGCTGCTGGAAG
CCCTAACCCTAGACGGGCCACAGCAGCAGCAGCAGCAGCTATCCCCAACCTCAACTATCCTCCTCCTCCTCCTCCACTGC
CGCAGCCATCCCTGTACAATGAGCGCTCGTCGGCGGCTGCGGCGAACACAGGGGCGTTAGAGTTGAGCCTGGAGCTGGGG
TTGGAGGCCGGGCCGCAGTGCTCCACCAAGGAGGAAGATGACGGTCTGGATCTTGAGCTTAGGCTCGGCTGCTCTTGATC
CATCGAGCATATCG---------TTCTCCAGTCTAGCCAATT-----ACCTCACTAGGTTGGTTCTCTAGTTAGTCTGCG
CCCTAGCTTGGTATTAAGGTCTAGCAGTAGCTAGCTCAGTTCAAGCTATGAGAATGGCTGAATTGGTGTTTGCTTCATCG
CTTCTTCAGTGTATCATTAGTTCGGCTTTGATGTTTCAGCTAGCTAGGTATCTATGTATATGGTCGTGTTCACTGTTTAT
G----ATGCTACTGCCCAGGGTGACCCATGATCTATGGAATCATTTTACTGTTGGTTTTTTCAGCATTTTCTCTCTCACG
TGGTGTAAATACTAGAAAATATCAAGTTATATTTTTG-TTTGGTTTGGACCTTTGGTTAACCAACGCAGACATACATTGC
CCAAAAAGGGATCGGGAAACTATATTATGACAT---ACTACTAAATTACCTTCAAAAAAAAGACATACTACTAAATTTGG
TAAAATCAAGCCCCAACACTACAATACATAAATA----------------------------------------------
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--------------------------------TAAAATTTCCAATGACTACACTGTGATTCATTTTGTATATCATAGTTC
GAAATGGTGAGGGAGGAAATCAGCCTGACAAATGTTGAAGAAAATGGTGAAAGAACAGTTTGCTTTGTGCT--CACCACA
TAGCTG----CATTGAAAAAAAAATCAAAAAAAT-GTTGAAGAAAATAAGTTAGATACAAAACTATAGTGGGTAGAGCAA
AGGTTGAACACATTATTAAATTCTTAGATGAATGATTTGTTGGACACGTCAGATTTGAACAGGAGAAGTTCCATGCTCTG
CTA---AAGAGTGAATGTTAAGAGAGTACATTTTCTCCCGTGCACGGGAGGAGGTCCGTGCATGGATTAGTCCATTGATT
ATTTTGGGTTGACCCCTGCATGCAATTTTTGGTAGAGATGGCATGCTCCACCCATCCAACTCCCCTGATTTTTATTTTAG
CTTTCAAATTTGAATCTGTTGTATCTTTTGAACTGAAAGTCCAATTTTTGTTCCTTTTGCGTATTCATGTTTCTCGTGAC
GAGGGCTTTCAAATAATACCACTCTTGAAT-----
>SNPs
---------------------------------------------------------------------SSSS-------
-----------------------S-----------------S--------------------S-----------S----S
SSSSS-SS-SSS--S-SSSSSS-SSSSS-SSS--SSS-SSSSSSS-S--SSSS-SSS--SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS--------------------S--------------SSS-----------------------
--------------------SSSS------------------------------------------------------S-
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------------------------------------------------------------SSSS----------------
-----------------------------------------------------------------------S--------
---------------------------------------------------SSSS---------------------S---
----------------SSSSSSSSSS-------------S-------------S--------------------------
------------------------------------------SS------------------------------------
-------S--------S---------------S-----------------------------------------------
--------------------------------------------------------------S-----------------
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----------------------------------------------------------------S---------------
---------------------------------------S--------------------------S------S------
--------------------------------------------S----SS-------------------------S---
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-----------------S--SSS---------S-----------------------------------------------
------------------------------------------------------SS------------------------
-------------------------------------------------------------------------------S
SSSSS-------S-------------------------------------------------------------------
--------------------------------------------------------S-------S---------------
S-S------------------------------SSS--------------------------------------------
---------------------SS---------------------------------------------------------
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----------------------------------------------------S----------------S----------
--------S--------------S--------------------------------------------------------
-----SSSSS------------------------------------------S---------------------------
--S------S------S------------S---------------------------------S------------SSS-
---------------------S--------------------S-S-----S--------S------S-------------
---------S----------------------------------------------------------------------
-S-------------------------S--------------------------S-------------------------
------------------S--S--------SSSSS
>forward_210
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------------------------------ACGATCAACTCCCGTCCAAC------------------------------
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>reverse_1905
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----------------------------------------------------------------AGCAGACATACATTGC
GCCA----------------------------------------------------------------------------
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