>input_sequence_80060
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----------------------------------------------------------ATGGCAAAGCACACTACCCTCC
TCCTCGTGGCAATAGTAGCCATCCTTCTCACTGCCACCGCCGCCACCCTGGCGAACGCCCCCGCCCCCGCAGC---CAAG
CCGACAGCGTACGAAATGCTAGGGCGATATGGCTTCCCACCGGGCATCCTCCCGCAGGGAGTGCATGACTACGAGCTCCG
ACCGGATGGCTCCTTTGAGGTACACTTCTCCGATGAATGCAAACTTCGTATTGACGGCCAGTACGACATCCACTACAGCA
CTCGGGTTGCCGGGAACATAAAAAATGACACGATCAGCGGCCTCGAAGGCATTAAGGTGAAGGTCTTTATTGCGTGGGCT
AGCATAAAGGATGTCGGCCGCGATGGCAATGAGCTTAGGCTGCACGCCGGGATCATATCCAAGTCATTCCCGGTCGACGT
TTTCTCCTCTAGCCCGAAATGTAACTGA----------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr3D_1_TraesCS3D01G478400
CAGTCGCTGGAAGGGGATGTTCTGGTGGCGGCTTGACGGAAGAGTGTGAGTCGTAGCATCTTGAATGATAGTTTCCTGTG
GGCTTTGAATGGGCTTCTTTGTGGCCAAATCTTGCGCCCAA-CCCAAAAGATGGTGTCAGGGGCCAGCACCGAGCGGTAA
GAACGAAACGGTATGTTCACTCGGCGGTGGGTACCGATCT-ATGCTGCATCAACGGCTGGAACAATTCGGGTGACGTGGC
TTCATGAGAAGGCAGGAAAATGATCTAGTGGGGTGCCTCTATTTAGATATAGAAGACTTGACCAACACTTGATCGGATGG
CTGTAGAC--TACCGATGTATGTTGCATCAACGGCTCGAACAATTCAGATGACGTGGCTTAATGAGAAGACAGAAAAATC
ATCTAGTGAAGTGCCCCTATTTAGATATAGAAGATAGGTCGCCTTGCATGATTCAAAAGGTATTGCAGACCAAGATAAAT
---------AATAATGGGCCTCAGGGCCTTTGAGAAGAAGTTGGTGAATCTTATT-A-----------------------
--------------------------------------------------------------------------------
----------------------AAGTAGAAAATAATTTC--TGCTAAAATAAGATACTCCCCACCGTTTCTAAATATAAG
TCTTTTTAGAGATTACAATATAAACTACATATGGAGCAAAATGAGTGAATCTACACTCTAAAATTTGTCTATATACATAT
GCATGTAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTTATATTGCCATCTCTAAAAAAACTTATCTTTAGG-ACGGAGGGG
GTACATAATTAATTGCACCTCAATGAATGTAAAGATT------TTTTTTTTGGAGGGAAGTAAATGTTT-TTTTATTGCT
ACGATTTGAAAAATTAATGAGCATATATATCTTA---T------C-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAATTTATATGACAATATTTTC------A------GTA------TATTTCCTACTAACTTTGGTGAGTACTGA
ATACACATTTATTGTGCACCAAATATT-----------TACAGATTTATCTCTATATATAGCCTGCATCTTTCTATGCAT
TC--ACACAAATATATCTGCAAAGATTTAG-TTGTCAGCCTGAGCTAGAGCACCAACAATGGCAAAGCACACTACCCTCC
TCCTCGTGGCAATAGTAGCCATCCTTCTCACTGCCACCGCCGCCACCCTGGCGAACGCCCCCGCCCCCGCAGC---CAAG
CCGACAGCGTACGAAATGCTAGGGCGATATGGCTTCCCACCGGGCATCCTCCCGCAGGGAGTGCATGACTACGAGCTCCG
ACCGGATGGCTCCTTTGAGGTACACTTCTCCGATGAATGCAAACTTCGTATTGACGGCCAGTACGACATCCACTACAGCA
CTCGGGTTGCCGGGAACATAAAAAATGACACGATCAGCGGCCTCGAAGGCATTAAGGTGAAGGTCTTTATTGCGTGGGCT
AGCATAAAGGATGTCGGCCGCGATGGCAATGAGCTTAGGCTGCACGCCGGGATCATATCCAAGTCATTCCCGGTCGACGT
TTTCTCCTCTAGCCCGAAATGTAACTGAGGCTCGACTGCAAGATCGACACAAGTGTCGCCGCCC-AGTCTGCCTCTTCGA
TCACGTCGCTTGGCATTTCCTTCTTTCTTCATACGATTGATGATGCAC------GTTGCTGCTTGTTTTGCAATCCCGTG
CCATCTTACCAATTAATGTACTCCCATT---GTAGTATGGGCAGAGACTGAATG--------------------------
--------------------------------------------------------------ATATAAAGAAGTGCCTTT
TGTTCATGATTGCAA------TTTGT--GAGATTTCAATTAACGAGGTGTAGGACAGTGAATGTATTTATCTGATCACAG
AAGGCATGATGGTATTGTGGCACAAAAG-AAA-CTTTCAATTAATTAGCTCTCAGCGTCATCTTAGATATAATTGGATTT
-TTTT-CGA---------------------------------GTATCTTTTTGTGTGAGGAAACTTTTAATCTAGTAATC
ATGTCATGTCAGCATTGGAACGAGCCGAAGGTGCGCCGCCGTCATCGCCCCTCCCTCACCA--GTCAGGCCAAAATTGTT
GTATTA--CA--GTCAGAAAGTCATGGTGCTAAGGCCCC-ACACGACCAACACACCAGAACAGCAACCGCCACCTATGAA
GAAAAGTATAGATCGAAAGGATCCAACGTGAAGACACACGAATGAAGATGGACACAGACTGGATCCATGCAGATCCACCA
AACACTACCACCGACTGAATCTCACGAGATCTGCCGGAGACACACCACCACGTGCCCTTCGACGACGCTAGATGCATCAC
C-AAAACGGGGGCTAGGCGGGGAGAATATTATTCCATCTTTAGG-TGATACCGTCACATCGTCTTCCTGAGCAAGACACA
AAC-----------TCACAAAACC-CCTAAAAATAG-GGCAAGATCCCTCATGCCGTCAAGGGCCACGGTCCACCGCACC
TTCATATAGATATTGATAGATACTTGCGTATAGATACTGACAAACACATGTTGGTGTGTTACCTTGAAAAATTAAACATA
G------------CAATGTAGTATTCTACACACTCCCTCTATTTTAAATTAATTTAAAATTTAAATTTGTCCTAATTGAA
AAAAA
>chr3B_31
------------------------------GCTTGATGGATGGGTGTGAGTAGTAGCATCTTGAATGATAGTTGCCTATG
GGCTTCAAATGGGCTTCTTAGTGGCCAAATCTAGTGCCTAG-GCCAAAAGATGGTGTCGGGGGCCAGCACCGAGCAGTAA
GAACGAAACGGTGTGTTAACTCGGCGGTGGGTACCGATCT-ATGCTGCATCAACGACTGGAACAACTCGGGTGACGTGGC
TTCATGAGAAGGCAGGAAAAACACCTAGTGAGGTGCCTCTATTTAGATATAGAAGACTTGACCAACACTTGATCGGACGG
CTTTAGAC--TACCGATCTATGTTGCATCAACGGCTAGAACAATTCGGGTGACGTGGCTTCATGAGAAGACATAGAAATC
ATCTAGCGGGGTGCCCCTATTTAGTTATAGAAGATTGGTCGCCTTGCATGATTCAAAAGGTATGGCGGGCCAAGATAAAT
---------AATAATGGCCCTCAGGGCCTTACATAAGAATTTGGTGAATGTTATT-A-----------------------
--------------------------------------------------------------------------------
----------------------ACTAGAAAATTAATTTC--TGCTAAAATAATATCGT-CCCACCATTCCTAAGTATAAA
CC-TTTTAGAGATTTCTATATGAACTACATACGAAGCAAAATGAGTGAATCTACATTCTAAAATGTGTCTATATACATCT
ATACGTAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCTATATTGAAATCTCCAAAAAGAATTATATTTAGGAACGGTGGGA
GTACATATTTAATTCCACCTCAATGAATGTAAAGATT------TTTTT---GGAGGGAATTAAATGTTTATTTTGTTTCT
ACGATTTGAAAAATTAATGAGCATATATATCTTGTAGTATTTATC-----------------------------------
--------------------------------------------------------------------------------
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-------TAATTTATATGAAAATATTTTTAGTAGGA------GTA------TATTTCCCATTAACTTTAGTGAGTACTGA
ATACACATTTATTGCACACCAAATATT-----------TATAGATTTATCTCTATATATAGCTTGCATCTTTCGATGCTC
TC--ACACAAATATATCTGCAAAGCTTTAG-TTGTCAGCCTGAGCTAGAGCACCAACAATGGCGAAGCACACTACCCTCC
TCCTTGTGGCAATAGTAGCCATCCTTCTCATTGCCACCGCCGCCACCCTGGACAAGGACCCAGCCCCCGCAGC---CAAG
CCGACAGCATACGAAATGCTAGGGCGATATGGCTTCCCACAGGGCATCCTCCCGCAGGGAGTGCATGACTACGAGCTCCG
ACCGGACGGCTCCTTTGAGGTACACTTCTCCGATGAATGCAAACTTCGTATTGACGGCCAGTACGACATCCACTATAGCA
CTCGGGTTGCCGGGAACATAAAAAATGACACGATCAGCGGCCTTGAAGGCATTAAGGTGAAGGTATTTTTTGCGTGGATC
AGCATACAGGATGTCGGCCGGGATGGCAATGAGCTTAGGCTGCACGCCGGGATCATATCCAAGTCATTCCCGGTCGACGT
TTTCTCCTCTAGCCCGAAATGTAACTGAGGCTCGACTGCAAGATCGACACAAGTGTCGCTACCC-AATCTGCCTCTTCGA
TCACGTCGCTTGACGTTTCCTTCTTTCTTCATAGGATTGATGATGCAC------GTTGCAGCTTGTTTTGCAATCCCGTG
CCATCTTACCAATTAATGTACTCCCATT---GTAGCATGGGCTGAGACTGAATGA-------------------------
-----------------------------------------------------------TATATATAAAGAAGTGCCTTT
TGTTCATGATTGCAAAATTCATTTGT--GAGATTTCAATTAACGAGGTGCTGGACAGTGAATGT-GTTATCTGATCCGAG
AAGGCATGATGGTATTGTGGCACAAAAC-AAA-CTTTCAATTAATTAGCTCTCAGTGTCATCTTAGATATAATTGGATTT
-TTTT-CGA---------------------------------GTACCTTTTT-TGTGAGGAAACTTTTGATCTAGTAATC
ATGTCATGTCAGCAATGGAATGAGCCGAAGGCGCGCCGCCGTCATCGCCCCTCCCTCACCAGAGTCAGGCCAAAATTGTT
GTATTA--CA--GTCGGAAAGTCATGGTGCTAAGGCCCC-ACATGACCAACACACCAGAACAGTAACCGCCACCTATGGA
AGAAAGTATAGATCGAAAGGATACAACGTGAAGACACACGAATGAAGATGAACATAGATTGGATCCATGCAAATCCACTA
AACACTACCACCGACTGAATCTCATGAGATCTGCCGGAGACACACCACCATGTGCCCTTCGATGACGCTAGATGCATCAC
C-AAAAC-GGGGCTAGGCGGGGAGAATATTATTCCATCTTTAGGGTGATATCGTCGCATCGTCTTCCTGATCAAGACACA
AAC-----------TCACAAAACC-CCTAAAAATGG-GGCAAGATCCCTCCTGCCGGCAAGAGCCACGG-CCACCGCGCC
TTCATATAGATATTGATAGATACTTGCGTATAGATACTGACAAACACATGTT-GTGTGTTACCTTGAAAAATTAAACATA
G------------CAATGTAGTATTCTACACACTCCCTCTATTTTAAAT-------AAATTTAAATTCGTCCTAATTGAA
AAAAA
>chr3B_31
------------------------------GCTTGATGTATGGGTGTGAGTAGTAGCATCTTGAATGATAGTTGCCTATG
GGCTTCAAATGGGCTTCTTAGTGGCCAAATCTTGCACCTAG-CCCAATAGATGGTGTCGGGGGCTAGCACGGAGCGGTAA
GAACGAAACGGTGTGTTAACTCGGCAGTGGGTACCGATCT-ATGCTGCATCAACGACTGGAACAATTCGGGTGATGTGGC
TTCATGAGAAGGCAGGAAAATCACCTAGTGGGGTGCCTCTATTTAGATATAGAAGACTTGACCAACACTTTATCGGACGG
CTGTAGAA--TACCGATCTATGTTGCATCAACGGCTAGAACAATTCGGGTGACATGGCTTCATGAGAAGACATAGAAATC
ATCTAGTGGGGTGCCCCTATTTAGATATAGAAGATTGGTCGCCTTGCATGATTCAAAAGGTATTGTGGGCCAAGATAAAT
---------AATAATGACCCTCAGGGCCTTATAGAAGAATTTGGTGAATGCTATT-A-----------------------
--------------------------------------------------------------------------------
----------------------AGTACAAAATTAATTTC--TGCTATAATAAGATAGT-CCCACCGTTTCTAAGTATAAA
CG-TTTTAGAGATTTCAATATGAACTACATACGAAGCAAAATGAGTGAATCTACATTCTAAAATGTGTCTATATACATCT
GTATGTAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCTATATTGAAATCTCCAAAAAGAATTACATTTAGGAACGGTGGGA
GTACATATTTAATTCCACCTCAATGAATGTAAATATT------TTTTT---GGAGGGAATTAAATGTTTATTTTGTTGCT
AAGATTTGAAAAATTAATGAGCATATATATCTTGTAGTATTTATC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAATTTATATGAAAATATTTTTAGTAGGA------GTA------TATTTCCCATTAACTTTGGTGAGTACTGA
ATACACATTTATTGCACACCAAATATT-----------TATAGATTTATCTCTATATATAGCTTGCATCTTTCGATGGTC
TC--ACACAAATATATCTGCAAAGCTTTAG-TTGTCAGCCTGAGCTAGAGCACCAACAATGGCGAAGCACACTACCCTCC
TCCTTGTACCAATAGTAGCCATCCTTCTCACTGCCACCGCTGCCACCCTGGCCAAGGCCCCTGCCCCCACAGCCAACAAG
CCGACGGCGTACGAAATGCTAGGGCGATATGGCTTCCCACCGGGCATCCTCCCGGAGGGAGTGCATGACTATGAGCTTCG
ACCGAACGGCTCCTTTGAGGTACACTTCTCCGATGAATGCAAATTTCGTGTTGACGGCCAATACGACGTCCACTACAGCA
CCCGGGTCGCCGGGAACATAAAAAATGACACGATCAGCGGCCTCGAAGGCATTAAGGTGAAGGTCTTTATTGCGTGGGCT
AGCATAAAGGAGGTTGGCCGCGATGGGGATGAGCTTAGGCTACTCGCTGGGATCATATCCAAGTCATTCCCGGTCGGCGA
TTTCTCCTCTAGCCCTAAGTGTAACTGAGGCTTGACTCCAAGATCGACACAAG--------------------TCTTCGA
TCACGTCGCTTGACGTTTCCTTCTTTCTTCGTAGGATTGATGATGCAC------GTTGCTGCTTGTTTTGCAATCCCGTG
CCATCTTACCAATTAATGTACTCCCATT---GTAGTATGGGCCGAGACTGAATGA-------------------------
-----------------------------------------------------------TATATATAAAGAAGTGCCATT
TGTTCATGATTGCAAAATTCGTTTGTGAGA--TTTCAATTAACGAGGTGCTGGACAGTGAATGT-GTTATCTGGTCAGAG
AAGGCATGATGGTATTGTGGCACAAAAG-AAA-CTGTCACTTAATTAGCTCTTAGCGTCATCTTAGATATAATTGGATTT
GTTTT-CGATCTTGAAGATAGC-TTACCACATTTCGCATGTGGTATCTTTTT-TTTGAGGAAACTTTTGATCTGTTAATC
ATGTCATGTCAGCATTGGAACAAGCCGAAAGCGCGCCACCGTCATCGCCCCTCCCTCACCTCAGTCAGGCCAAAAATTTT
GTATTG--CA--GTCGGAAAGTCCTGGTGCTAAGGCCCC-ACATGACCAACACACCAGAACAACAACCGTCACCTATGAA
GAGAAGTATAGATCGAAAGGATCCAACGTGAAGACACACGAACGAAGATGAACACAGACTGGATCCATGCAGATCCACCA
AACACTACCACCGATTGAATCTCATGACATCTGCCGAAGACACACCACCACATGCCCTTCGATGACACGAGATGCATCAT
C-GAAATGGGGGCTAGGCGGGGAGAATATTATTCCATCTTTACGGTGATACCTTCGCATCATCTTCCTGAGCAAGACACA
AACCCTAAACAAACTCACAAGACC-CCTAAAAATGG-GGCAAGATCCCTCCTGCCGGCAAGGGCCATGGTCCACCACTCC
GTCATATAGATATTGATAGATACTTGCATATAGATACTGACAAACACATGTTGGTGTGTTACCTTGAAAAATTAAACGTA
G------------CAATGTAGTATTCTACACACTCCCCCTATTTTAAATTAATTTAAAATTTAATTTTTTCCTAATTGAA
AAAAA
>chr3B_31
GCTTGACA------------------------------GATGGGTGTGAGTAGTAGGATCTTGAATGATAGTTTCCTAT-
-----------GGCTTCTTAGTGGCCAAATCTTGCGCCTAG-CCCAAAAGATTGTGTCGGGGGCCGGCACTGAGCGGTAA
GAACGAAATGGTGTGTTAACTCGGAGGTGGGTATCGATCT-ATGCTGCATCAACGACTGGAACAATTCGGGTGATGTGGC
TTCATGAGAAGGCAGGAAAAGCACCTAGTGGGGTGCCTCTATTTAGATATAGAAGACTTGACCAACACTTGATCGGACGG
CTGTAGAC--TACCTATCTATGTTGCATCAACGGCTAGAACAATTCGGGTGAAGTGGCTTCATGAGAAGACATAGAAATC
ATCTAGTGGGGTGCCCCTATTTAGATATAGAAGATTGGTTGCCTTGCATGATTCAAAAGGTATTGCGGGCCAAGATAAAT
AAGATAAATAATAATGGCCCTCAGAGCCTTACAGAAGAATTTGGTGAATGTTATT-A-----------------------
--------------------------------------------------------------------------------
----------------------AGTAGAAAATTAATTTTTATGTTAAAATAAGATAGT-CCCACCGTTCCTAAGTATAAA
CC-TTTTAGAGATTTCAATATGAACTACAAAAGAAGCAAAATGAATGAATCTACATTCTAAAATGTGTCTATATACATCT
GTATATAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCTATATTAAAATCTCCAAAAAGAATTATATTTAGGAATGGTGGGA
GTACATATTTAATTCCACCTCAATGAATGTAAAGATT------TTTTT---GGAGGGAATTAAATGTTTATTTTGTTGCT
ACGATTTGAAAAATTAATGAGCATATATATCTTGTAGTATTTATC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAATTTATATGAAAATATTTTTAGTAGGA------GTA------TATTTCCCATTAACTTTGGTGAGTACTGA
ATACACATTTATTGCACACCAAATATT-----------TATAGATTTATCTCTATATATAGCTTGCATCTTTCGATGCTC
TCATACACAAATATATCTGCAAAGCTTTAG-TTGTCAGCCTGAGCTAGAGCACAAACAATGGCGAAGCACACTACCTTCC
TCCTCGTAGCAATAGTAGCCATCCTTCTCACTGCCACTGCCGCCACCCTGGCCAAGGCCCCCGCCCCCACAGCCAACAAG
CCGACGGCATACGAAATGCTAGGGCGATATGGCTTCCCACCGGGCATCCTCCCGGAGGGAGTGCATGACTACGAGCTCCG
ACCAGACGGCTCCTTTGAGGT-------------------AAATTTCGTGTTGACGGCCAGTACGACGTCCACTACAGCA
CCCGGGTCGCCGGGAACATAAAAAATGACACGATCAGCAGCCTCGAAGGCATTAAGGTGAAGGTCTTTATTGCGTGGGCC
AGCATAAAGGAGGTTGGCCGCGATGGGGATGAGCTTAGGCTGCACGCTGGGATCATATCCAAGTCATTCCCGGTCGGCGA
TTTCTCCTCTAGCCCAAAGTGTAACTGAAGCTCGACTCCAAGATCGACACAAG--------------------TCTTCGA
TCACATCGCTTGACGTTTCCTTCTTTCTTCGTAGGATTGAAGATGCAC------GTTGCTGCTTGTTTTGTAATCCTGTG
TCATCTTACCAATTAATGTACTCCCATT---GTAGTATGGGCTGAGAATGAATGATACTCTCTCCGTTCCAAAATAGATG
ACTCAACTTTGTACTAAAGTTAGTATAAAGTTGAGTCATCTATTTTGGAACGGAGGGAGTATATATAAAGAAGTGCCTTT
TGTTCATGATTGCAAAATTCATTTGT--GA--TTTCAATTAACGAGGTGTTGGACAGTGAATGT-GTTATCTGATCAAAT
AAGGCATGATGGTATTGTGGCACAAAAG-AAA-CTGTCACTTAATTAGCTCTTAGCGTCATCTTAGATATAATTGGATTT
GTTCT-CGATCTTGAAGATAGC-TTATGACATTTCACATGTCGTATCTTTTT-TTTGAGGAAAATTTTGATCTATTAATC
ATGTCATGTCAGCATTGGAACGAGCCGAAAGCGCGCCGCTGTCATCGCCCCTCCCTCACCGGAGTCAGGCCAAAAAATTT
GTATTG--CA--GTCGGATAGTCATGGTGCGAAGGCCCC-ACATGACCAACACACCAGAACAGCAACCGTCGCCTATGAA
GAGAAGTATAGATCGAAAGGATACAACGTGAAGACACACGAACGAAGATGAACACATACTGGATTCATGTAGATCCACCA
AACACTACCACCGATTGAATCTCATGAGATCTGCCGGAGACACACCACCACGTGTCCTTCGATGACGCGAGATGCATCAC
C-GAAACAGGGGCTAGGCGGGGAGAATATTATTCCATCTTTACGGTGATACCTTCGCATCGTCTTCCTGAGCAAGACACA
AACCCTAAACAAACTCGCGAAACC-CCTAAAAATGG-GGCAAGATCCCTCCTGTCGGCAAGGGCCAAGATCCACCACTCC
GTCATATAGATATTGATAGATACTTGCATATAGATACTGACAAACACATGTTGGTGTGTTACCTTGAAAAATTAAACGTA
G------------C------------TACACACCCTCTCTATTTTAAATTAATTTAAAATTTAAATTTGTCCTAATTGAA
AAAAA
>chr3D_59
----------------------------------------------------------TCTTGAACGATAGTTGCCTATG
GGCTTTGAATGAGCTTCTTAGTGGCCAAATCTTATGCCCACCCCCAAAAGATGGTGTCGGGGGCTAGCAGCGAGCGGTAA
GAACGAAACGGTATGTTCACTCGGCGGTGGCTACCTATCTGATGCTGCATCAACGACTAGAACAGTTCGGGTGACGAGGC
TTCATGAGAAGGCAGGAAA-TCACCTAGT-GGGTGCCTTTATTTAGATATAGAAGATTTGACCAACACTTAATCAGACGG
CTGTAGAC--TCCCGATCTATGCTGCATCAACGGCTAAAACAATTCGGGTGACGTGGCTTCATGAGAAGGCAGAAAAATC
ACCTAGTGGGGTGCCCCTATTTAGATATAGAATATAGGTCGCCTTGCATGATTCAAAAGGTATTGCTGGCCAAGATAAAT
---------AATAATGGCCATTAGGACCTTTGAGAAGAACATGGTGAATGTTATTAA-----------------------
--------------------------------------------------------------------------------
----------------------AGTAGAAAATTAATTTC--TGCTAAAATAAGATACA-CCTACCGT-CCTAAATATAAA
TCTTTTTAGAGATTACAATATAAACTACATACGGAGAAAAATGAGTGAATCTACACTCTAAAATGTGTCTATATACATCT
TTATGTAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TCTATATTGAAATCTCTATAAAGAATTATATTTAGGAATGGTGGGA
GTACATATTAAATTCCACCTCAATGAATGTAAAGATT------TTTTT---TGAGGGAATTAAATGTTTATTTTGTTGCT
ATGATTTGAAAAATTAATGAGCATATATATTTTT---TATTTATC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAACATATATTACAATATTTTT------A------GTA------TATTTCCCATTAACTTTGGTGAGTACTGA
ATACACATTTATTGTACACCAAATATT-----------TATAGATTTATCTCTATATATAGCTTGCATCTTTCGATGCTC
TC--ACACAAATATATCTGCAAAGCTTTAGTTTGTCAGCCTGAGCTAGAGCACCAACAATGGCGAAGCATACTACCCTCC
TCCTCGTGGCAATAGTAGCCGTCCTTCTCACTGCCACCGCCGCCACCCTGGCCAAGGCCCCCTCCCCCACAACCAACAAG
CCGACAGCGTACGAAATGCTAGGGTGATATGGCTTCCCACCGGGGATCCTCCCGGAGGGAGTTCATGACTACGAGCTCCA
CCTAGACGGCTCCTTTGAGGTACACTTCTCCGATGAATGCAAACTTCGTGTTGACGGCCAGTACGACATCCACTACAGCA
CTCGGGTCGCCGGGAACATAAAAAATGAAACGATCAGCGGCCTCGAAGGCATTAAGGTGAAGGCCTTTATTGCGTGGATC
AGCATACGGGAGGTCGGCCGCGATGGCGATGAGCTTAGGCTGCACGCCGGGATGATATCCAAGTCATTCCCCGTCGGCGA
TATCTCCTCTAGCCCTAAGTGTAACTGAGGCTCGACTCCAAGATAGACACATG--------------------TCTTCGA
TCACGTCGCTTGAGGTTTCCTTCTTTCTTCGTAGGATTGATGATGCAC------GTTGCCGATTGTTTTGCAATCCCGTG
CCATCTTACCAATTCATGTACTCCCATT---GTAGTATGGGCTGAGACTGAATGATA-----------------------
-----------------------------------------------------------------TAAA-AAGTGCCTTT
TGTTCGTGATTGCAAAATTTATTTGT--GAGATTTCAG-TTATGAGGTTTTGGATGGTGAACGC-TTTATCTGATTAGAG
AAAGCATAATGGTATTGTGGCACAAAAATAAA-CTTTTACTTAATTAGCTCTCAACATCATCTTAGATATAACTTGATTT
-TTTG--GATCTTGAA-------------------------------------------------TTCGATCTATTAATC
ATGTCATATCAGCATTGGAGTGAACCGAAGACACGCTGCCGTCATCGTCCCTCCCTCACCAGAGTCATGCTAAATTTGTT
GTATTA--CATGGTCAAGAAGTCATCATGCTAAGACCCC-ACAGATACAACGCGCCAGAACAACAACTGTTGCCGGTGAA
GAGAACTATATATCGAAAGGATCCCACCTGAAGACACGTAAACGAAGATGAACAAAGGCCGGGTCCAAACAGATCCACGA
AACACTAGCACCAACTGAATCTCGCGAGATCTACCGGAGACACACCTCCACACGCCCTTCGATGACGGTAGATGCATCAC
C-ATAATGGGGGCTAGGCGGGGAGAACCTTATTCAATCTTTAGGGTGCCGTTGCCCCAACGTATTCCTCAGTAAGACACA
AACCTAAA-CAAACTCACAAAGACACCTAAAAGCGG-AACAAGATCCGTCCCACCGGCAAGGGCCAAGGTCGACATTGCC
TTCATATAGATACTGATAGATACTTACATATAGATAATGATAAACGCATGTTGGTGTGTTACCTTGAAAAAATAAACATA
ACACAGTAATGTTC------------TACACACTCCCTCTATTTTAAATTAATTTAAAATTTAAATTCGGCCTAATTGAA
AAAA-
>chr3A_317
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------GG
CTGTAGACTATACCGATCTATGCTGCATCAACGGCTAGAACAATTCGGGTTATGTGGCTTCATGAGAAGATAGAAAAATC
ACCTAGTGAGGTGTCCCTATTTAGATATAGAAGATAGGCCGCCTTGCATGATTCAAAAGGTATTGCAGGCCAAGATAAAT
---------AATAATGGCCCTCATGGCCTTTGAGAAGAACTTGGTGAATGTTATTAA-----------------------
--------------------------------------------------------------------------------
----------------------AGTAGAAAATTAATTTC--TGCTAAAATAAGATACTCCCCACCGTTTCTAAATATAAG
TCTT--------TTACAATATGAACTACATACGGAGTAAAATGAATGAATATACACTATAAAATGTGTCTATATACATCT
GTATGTAGCGGAAATCCCTTTTGGAGCTCGGCCTCAAGTGAGGCCTCCAAATTCAAATTTGAAATTACATCAAAATTCAT
ATTTTTACATTTCAAAAAATTCTGAAAAAATACAGATATAAATGAAGGCATAACACACATGTGTGTAAATTTTCAGTTCA
AAATACGTTGAAATGAGGGTTGTGTAAAACAGACAAATCTAGGGCTGTTTAACACATGATACTATTTATCCTCGCAGGCC
ATGAATTTGTCTTTTTTGTACAGCTCGCAACTCAAGGTATTTCATCATGAAATTTTTCACGCATGTGAGTTACATCCTTA
CATACACGCATATTTTTTTAGAATTTTTTGAACCATAAAAGTCTGAATTTGAATTTTTCAAATATAAAGGCCTCCATGGA
GCTTGGCCTCCAAAACGCCTTTCTGTGTATGTAGTCTATATTTAAATCTTTAAAAAGACTTATATTTAGGAAGGGAGAGA
GTACATATTTAATTGCACCTCAATGAATGTAAAGATT------TGTTTTTTGGAGGGAAGTAAAATTTTATTTTGTTACG
ACGATTTGAAAAATTAATGAGCATATATATCTTA---TATTTATC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAATTTATATGCCAATATTTTT------A------GTAGGAGTGTATTTCCTATTAAAGTTGGTGAGTACTGA
ATACACATTTATTGTATACCAAATATT-----------TATAGATTTATCTCTATATATAGCCTGCATCTTTGGATGCTT
TC--ACACAAATATATCAGCACAGCTTTAG-TTGTCAGCCTGAGCTAGAGCACCAACAATGGCAAAGCACACTACCCTCC
TCCTTGTGGCAATAGTAGCAATCCTTCTCACTGCCACCGCCGCCACCCTAGCCAACACCCCCGCCCCTGCAGC---CAAG
CCTACAGCGTATGAAATGCTAGGGCGATATGGCTTCCCACCGGGCATCCTCCCGCAGGGAGTGCATGACTACGAGCTCCG
ACCAGACGGTTCCTTTGAGGTACACTTCTCCGATGAATGCAAACTTTGTATTGACGGCCAGTACGACATCCACTACAGCA
CTCGGGTTGCCGGGAACATAAAAAATGACATGATCAGCGGCCTTGAAGGCA-----------------------------
----TACAGGATGTCGGCCGCGATGGCAATGAGCTTAGGCTGCACACCGGGATCATATCCAAGTCATTCTCGGTTGACGT
TTTCTCCTCTAGCCCTAAGTGTAACTGAGTCTCGATTGCAAGATCGACACAAGTGTCGCCACCCGAGTCCGCCTCTTCGA
CCACGTCGCTTGACATTTCCTTCTTTCTTCGCGGCATTGATGGTGCAC------GTTGCTGCTTGATTTGCAATCCCGTG
CCATCTTACTAATTTTTGTACTCCCATT---GTTTTATGGGCTGAGACCGAATGATA-----------------------
-----------------------------------------------------------------TAAAGAAGTTCCTTT
TGTTCGTGATTGCAAAATTCATTTGT--GAGATTTCAATTAACGTGGTGTTTGACGGTGAATCC-GTTATCTGATCAGAT
AAAGCATAATGGTATTTTGGCACAACAATAAA-TTTTCACTTAATTAGCTCTGTACATCATCTTAGATACATCTGAATTT
-TT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr3D_430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------ATAGGTCGCCTTGCATGATTCAAAAGGTATTGCGGGCCAAGATAAAT
---------AATGATGGCCCTCGGGGCCTTTGAGAAGAG------GAATGTTATTAAAGTACCCCCTCCGTCCCAAAATT
CTTGTCTTAAATTTGTCTAAATACAGATGTATCAAGTCACGTTTTAGTAGTAAATACATCCGTATCTAAACGAATCTAAG
ACAAGAATTTTGGGACGGAGGGAGTAGAAAATTAATTTC--CGCTAAAATAAGAGA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATATTTAATTCCACCTCAATGAATGTATAGATT------TTTTT---GGAGGCATTTAAATGTTTATTTTGTTACT
ACGATTTGTAAAATTAATGAGCATATATATCTTA---TAT----C-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAATTTATATGACAATATTTTT------A------GTA------TATTTCCTATTAACTTTGGTGAGTACTGA
ATACACATTTATTGTACACCAAATATT-----------TATAGATTTATCTCTATATATAGCCTGCATCTTTCTGTG--C
TT--ACACACAAATATCTGCAAAGCTTTAG-TTGTCAGCCTGAGCTAGAGCACTAGCAATGGCGAAGCATACTACCCTCC
TCCTCATGGCAATAGTAAACATCCTTCTCACTTCCACCGCCGCCACCCTGGCCAAGGCCCCCGCCCCCGCAGCCAACAAG
CCGACGGCGTACGAAATGCTAGGGCGATATGGCTTCCCACCGGGCATCCTCCCGCAGGGAGTGCATGACTACGAGCTCCG
ACCGGACGGCTCCTTTGAGGTACACTTCTCCGATGAATGCAAACTTCGTATTGACGGCCAGTACGACATCCACTACAGCA
CTCGGGTTGCCGGGAACATAAAAAATGACACGATCAGCGGCCTCGAAGGCATTAAGGTGAAGGTCTTTATTGCGTGGATC
AGCATACAGGATGTCGGCCGCGATGGCAATGAGCTTAGGCTGCACGCCGGGATCATATCCAAGTCATTCCCGGTCGACGT
TTTCTCCTCTAGCCCGCAATGTAACTGAGGCTCGACTGCAAGATCGACACAAGTGTCGACATCC-AGTTTGCCTCTTCGA
TCACGTCGCTTGATGTTTCCTTCTTTCTTCGTAGGATTGATGATGCAC------GTTTCTGCTTGTTTTGCAATCCCGTG
CCATCTTACCAATTCATGTACTCCTATT---GTAGTATGGGCTGAGATTGAATGTTA-----------------------
-----------------------------------------------------------------TAAAGAAGTGCCTTT
TCTTCATGATTGCAAAATTCATTTGT--GAGATTTCAATTAACGAGGTGCTGGACAGTGAATGT-GTTATCTGATCAGAG
AAGGCATGATGGTATTGTGGCACAAAAG-AAA-CTGTCACTTAATTAGCTCTTAGCGTCATCTTACATATAATTGGATTT
-TTTT-CGATCTTGAAGATAGC-TTACCACATTTTGCATGTGGTATCTTTTTTTGCGAGGAAACTTTTGATCTGTTAATC
ATGTCATGTCAGCATTGGAACGAGCTGAAAGCGCGCCTCCGTCATCGCCCCTCCCTCACCGGAGTCAGGCCAAAATTGTT
GTATTA--CA--GTCGGAAAGACATGGTGCTAAGGCCCT-ACATGACCAACACACAAGAACAGCAACTGTCGCCAATGAA
GAGAAGTATAGATCGAAAGGATCCAACGTGAAGACACACGAACGAAGATGAACATAGACTGGATCCATGCAGATCCACCA
AACACTACCACCGACTGAATCTCATGAGATCTACTGGAGACACACCACCACGTGCCCTTCGATGACGTGAGATGCATCAC
C-GAAACGGGGGCTAGGCGAGGAGAATATTATTCCATCTTTAGGGTGACACCTTCGCATCATCTTCCTGAGCAAGACACA
AACCCTAAACAAACTCACAAAACC-CCTAAAAATGG-GGCAAGATCCCTCCTGCCGGCAAGGGCCACGGTCCACCACTCC
TTCATATAGATATTGATATATACTTGCATATAGATACTGACAAACACATGTTGGTGTGTTACCTTGAAAAAGTAAACGTA
A------------TAATGTAGTATTCTACACACTC-CTCTATTTTAAATTAATTTAAAATTTAAATTCGTCCTAATTGAA
AAAAA
>chr3D_430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------ATAGCTCGCCTTGCATGATTCAAAAGGTATTGCGGGCCAAGATAAAT
---------AATGATGGCCCTCGGGGCCTTTGAGAAGAA------GAATGTTACTAA-----------------------
--------------------------------------------------------------------------------
----------------------AGTAGAAAATTAATTTC--TGCTAAAATAAGAGA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATATTTTATTCCACCTCAATGAATGTAAAGATT------TTTTT---GGAGGCATTTAAATGTTTATTTTGTTACT
ATGATTTGTAAAATTAATGAGCATATATATCTTA---TATTTATC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAATTTATATGACAATGTTTTT------A------GTA------TATTTCCTATTAACTTTGGTGAGTACTCA
ATACACATTTATTGTACACCAAATATT-----------TATAGATTTATCTCTATATATAGCCTGCATCTTTCTGTGCTT
AC--ACACAAATATATCTGCAAAGCTTTAG-TTGTCAGCCTGAGCTAGAGCACTAGCAATGGCGAAGCATACTACCCTCC
TCCTCATGGCAATAGTAAACATCCTTCTCACTGCCACCGCCGCCACCCTGGCCAAGGCCCCCGCCCCCGCAGCCAACAAG
CCGACGGCGTACGAAATGCTAGGGAGATATGGCTTCCCGCCGGGCATCCTCCCGGAGGGAGTGCTTGACTACGAGCTCCG
ACCAGACGGCTCCTTTGAGGTACACTTCTCCGATGAATGCAAACTTCGTGTTGACGGCCAGTACGACATCCACTACAACA
CTCGGGTCGCTGGGAACATAAAAAATGACACGCTCGGCGGCCTCGAAGGCATTAAGGTGAAGGTCTTTATTGCGTGGGTC
AGTATAAAGGAGGTTGACCGCGATGGGGATGAGCTTAGGCTGCACGCCGGGATGATATCCAAGTCATTCCCGGTCGGCGA
TTTCTCCTCTAGCCCTAAGTGTAACTGAGGCTCGTCTCCAAGATGGACACAAG--------------------TCTTCGA
TCACGTCGCTTGAGGTTTCCTTCTTTCTTCGTAGGATTGATGATGCAC------GTTACCTATTGTTTTGCAATCCCGTG
CCATCTTACCAATTCATGTACTCCCATT---GTAGTATGGGCTGAGACTGAATGATA-----------------------
-----------------------------------------------------------------TAAA-AAGTGCCTTT
TGTTCGTGATTGCAAAATTTATTTGT--GAGATTTTAG-TTACGAGGTTTTGGACGGTCAATGC-TTTATCTGATTAGAG
AAAGCATAATGGTATTGTGGCACAAAAA-GAAACTTTTACTTGATTAGCTCTCAACATCATCTTAGATATAACTGGATTT
-TTTG--GATCTTGAA-------------------------------------------------TTCGATCTATTAATC
ATGTCATATCAGCATTGGAGTGAACCGAAGACACGCTGCCATCATCGCCCCTCCCTCACTAGAGTCATGCTAAATTTGTT
GCATTAGATA--GTCAGGAAGTCATCATGCTAAGACCCC-ACAGATACAACACGCTAGAACAACAACCGTTGCCGGTGAA
GAGAATTATATATTGAAAGGATCCCACCTGAAAACACGTAAACGAAGATGAACAAAGGTTGGGTCCAAACAGATCCACGA
AACACTAGCACCAACTGAATCTCGGGAGATCTACCGGAGACACACCTCCACAC-CCCTTCGATGACGGTAGATGCATCAC
C-GTAAT-GGGGCTAGGCGGGGAGAACCTTATCCCATCTTTAGAGTGCCGTCGCCCCAACGTATTCCTCAGTAAGACACA
AACCTAAAACAAACTCACAAAAACACCTAAAAGCGG-AGCAAGATCCGTCCCACCGGCAAGGGCCAAGGTCCACATCGCC
TTCATATAGATACTGATAGATACTTACATATAGA----------------------------------------------
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>chr3A_714
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-TACATATTCAATTCCACCTCAATGAATGTAAAGATC------TTCTT---GGAGGGAATTAAATGTTTATGTTGTTACT
ACGATTTGAAAAATTAATGAGCATATATATCTCT---TATAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTTGTGTG
TGTGTGTGTGTGTGTGTCTGTGTGTGCGCATGTGTGTATAGTTACTGGGGTGTGTGTACATATATGTGTGTAAATATATG
CTATACTAAGTGTGAGTGTAGAATAGCTTATTCTACACCCGAGTAACGATACATACAAAATGTAGTAACGCAATATATAA
AATATAGTGATTTTTCTAAAAATAT-----------------------------------------------AGTAAAAT
ACAAACTTGGATAGTAAAACTAATATTTTTAAAATTACTATAGATTTATCTCTATATATAGTCTGCATCTTTCGATGCTT
TC--GCAAAAATATATCGGCAAAGCTTTAG-TTGTCAACCTGAGCTAGAGCACCAACAATGGCGAGGCATACTACCCTCC
TCCTCGTGGCAATAGTAGCCATACTCGTCACTGCCACCGCCGCCACCCTGGTCAAGGCCCCAGCCCCCGCAG---ACAAG
CCGATGGCATACGAAATGCTAGGGCGATATGGCTTCCCACCGGGCATCCTCCCGGAGGGAGTGCATGACTACGAACTCCG
ACTGGATGGCTCCTTTGAGGTACACTTATCCGATGAATGCAAATTACGTATCGACAGCCAGTACGACGTCCACTACAACA
CTCGGGTCACCGGGAACATAAAAAATGACACGATCAGCGGCCTCAAAGGCATTGAGGTGAAGGTCTTTATTGCGTGGGTC
AGCATAAAGGAGGTCGGCCGCGATGGGGATGAGCTTAGGCTGCACGCCGGGATGATATCCAAGTCATTCCCGGTCGACGC
TTTCTCCTCTAGCCCGAAGTGTAACTGAGGCTCGACTGCAAGATCGACACAAGTGTCGCCACCCGAGTCTTCCTCTTCGA
TCATGTTGCTTAATGTTTCCTTCTTTCTTCGTAG-ATTGATGATGCATGCGGCTGTCGCTGCTTGTTTTGCAACCCCATG
CCATCTTGCCAATTCATGTACTCCCATT---GTTGTATGGGTTGAGACCAAGTGATA-----------------------
-----------------------------------------------------------------TTAAATGGTGCCTTA
TGTTCGTGATTGCAAAATTCATTTGT--GAGATTTCAATTAACGAGGTGCTGGACGGTGAATGC-GTTATCTGATCAAAG
AAGGTATAATCGTATTGTGGCACAAATG-GAAACTGTCACTTAATTAGCTCTCGGCATCATCTTAGATATAATTGGAATT
-TATTTCGATCTTGAAGATAGCTTTACCGCATTTCCCATGTGGTATCTTTTT-TGCGATAAAACTTTTGATCTATTAGTG
CTGCCATGTCAGCATTGGAGTGAGCCAAAGGGGCGCCGTCGTCATCGTCCCTTCCTCATCGGAGTCAGGCCAAACATGTT
TTATTAGACA--GTCGGAAAGTCATGGTATTAAGGCCCC-ACGGGATCAACGCACCAGAACAGTAAACATCGCGTATGAA
AAGAACTATAGATTGAAAGGATCCAACATAATGACACACGAACGAAGATGAACACAGACTGGATCCATGCAGATCCACCA
AACACTAGCACCGATTGAAACTCATGAGATCTGCCAGAAACACACCACCACATGCCATTTGATGATGCTAGATGCATCTG
CCAAAATGGGCACTAGGTAGGGACAAACTTATTCCATCTTTAGAGTGACACCGT--CATGGTCTTTCTGAGCAAGACACA
AACCTAAG-CAAACTCACAAAAACACCAG---ATGG-GGCAAGATCCCTCCCGCCGGCAAGGGCCAGGGTCCACCACTCC
TTCATAAAGATATTGATAGATACTTGCATATAGAAATTGACAAACACATGTTGGTGTGTGACCTTGAAAAAATAAACATA
G------AATATTC------------TACACACTCCCTCTATTTTAAATTAATTAAAAATGTAAATTCATCCTAATTGAA
AAAAA
>chr3A_715
--------------------------------------------------------------------------------
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--ACATATTTAATTCCACCTCAATGAATGTACAGTAAAGATTATTTTT---TGAGGGAATTAAATGTTTATTTTGCTGCT
ATGATTTGAAAAATTAATGAGCATATATATCTTA---TATTTATC-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------TAATTTATATGAGAATATTTTT------AGTAGGGGTA------TATTTCCAATTAACTTTGGTGAGTACTGA
ATACACATTTATTGTATACCAAATATT-----------TATAAATTTATCTCTCTATA--GCCTGCATCTTTTTGTGCTG
AC--ACACAAATATATTTGCAAAGCTTTAG-TTGTCAGCCTGAGCTAGAGCACCAACAATGGCGAAGCACACTACCCTCC
TCCTCGTGGCAATAGTAGACATCCTTCTCACTGCCACCGCCGCCACCCTGGCCAAGGCCCTAGCCCCCGCAG---CCAAG
CCGACGGCGTACGAAATGCTAGGGCGATATGGCTTCCCACAGGGCATCCTCCCGCAGGGAGTGCATGACTACAAGCTCCG
ACCGGACGGCTCCTCTGAGGTACACTTCTCCGATGAATGCAAATTGTGTGTCGACGGCCAGTACGACATCCACTACAGCA
CTCGGGGCGCCGGGAACATAAAAAATGACACGATCAGCACTCTTGAAGGCATTAAGGTGAAGGTCTTTGTTGCGTGGGTC
AGCATAAAGGAGGTTGGCCGTGATGGGGATGAGCTTAGGCTGCACGCCGGGATGATATCCAAGTCATTCCCGGTAGATGT
TTTCTCCTCTAGCCCTAAGTGTAACTGAGGCTCGACTGCAAGATCGACACAAGTGTCCCCATCCCAGTCCGCCTCTTCGA
TCACGTCGCTTGACGTTTCCTTCTTTCTTCGTAGGATTGATTATGCAC------GTTGGTGCTTGTTTTGCAACCCCTTA
CCATCTTACCAATTCATGTACTCCCATTTTAGTAGTATGGGCTGAGATTGAATGATA-----------------------
-----------------------------------------------------------------TAAAAAAGTGCCTTT
TGTTCGTGATTGCAAAATTTATTTGT--GAGATTTCAATTAACGAGGTGCTGGACGGTGAATGC-GTTATCTAATCAGAG
AAGGCATAATGGTATTGTGGCACAAAAG-GAAACTTTCACTTAATTAGCTCTCAACGTCGTCTTAGATATAATTAGAATT
-TTTTT--ATCTTAAAGATAGC-TTACCACATTTCCCATCTGGTATCTTTTTTTGCGAGGAAACTTTTGATCATTTAATC
AAGCCACGTCAGCATTGGAGCGAGCCAAAGACGCGCT-TCGTCATCGCCCCTCCCTCACCGGAGTCAGGCCAAACTTGTT
GTATTAGATA--GTCAGAAACTCATCGTGCTAAGGCCCCCACAGGATCAGTGCACCAGGACAGTAAACCTTGCCTATGAA
GAAAAATATAGATCGAAAGGATCCAGCATGAAGACACACGA-CAAAGATGAACACAGACTGGATCCATGCAGATCCACCA
AACACTAGCACCGGCTGAATCTCATGAGTCTGCC-----ACACACCACCACATGGCCTTCGATGACGCTAGATGCATCAC
C-AAGACGGGCGCTAGGCGGGGTGAACCTTATTCCATCTTTAGAGTGATACCATCGCATGGTCTTCCTGAGCAAGACACA
AACCCTACACAAACTCACAAAAACAACTG---ATGGAGGCAAGATCCCTCCCGCCGGCAAGGGTCAGGGTCCACCACTCC
TTCATAAAGATATTGATAGATACTTGCATATAGATATTGACAAACAGATGTTGGTGTGTTACCTTGAAAAAATAAATGTA
GCAATGTAATATTC------------TACACACTCCCTCTATTTTAAATTAATTAAAATTTTAAATTCGTCCTAATTGAA
AAAAA
>SNPs
SSS-SS-SSSSSSSSSSSSSSSSSSSSSSS------S---S-S--------S-------------------------S--
-------------------S--------------------S-----------------S---------------------
-------------------------------------------------------S------------------------
---------------------S-S-----------------------------------------------------S--
-----------------S------------------S---------S-S-----------S-------------------
---------S----------------------------------------------------------S-----------
-----------------S---------------------S---------S------------------------------
--------------------------------------------------------------------------------
-----------------------SSSSS---S------------------------------------------------
-------------------------------S--------------------------------S-------------S-
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------SS-----------S------S---------------S
-------S------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------------------------------S-------------------
---------------S------------------------S-------------------------------------S-
------------------------S-------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
------------S--------------------S----------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-------------S------------S--
--------------------------------------------------------------------------------
----------------------------------------------------S---------------S-----------
-------------------------------S------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------S-----------------
-------------------------------------------------------S------------------------
----------------------------------S---------------S-----S--------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_28
--------GGAAGGGGATGTTCTGGTGG----------------------------------------------------
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-----
>reverse_3244
--------------------------------------------------------------------------------
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-------------------------------------------CGACCAACACACCAGAACAG-----------------
--------------------------------------------------------------------------------
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-----
