>input_sequence_79899
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----------------------------------------------------ATGGCGCAGGTCTGGGCGGTGTTCCTGG
CCGTGGGGTCGCTCGCCATCGGCATGCTCGGGGTGCTCGGCGTCTGGCTCTGCTACCTGTTCCAGGCCGTGGCGTTTGGC
CCGCCCCCCGCCCCGCCGCCCGAGACGCCGGAGACGGTCGACGACG---A---CGACGACAAGAACGGGCTATCAGAGGC
GGAGCTGAGGCAGCTGGGCGGTGTCGTCCAGGCGGCGACCGCGAACGGC---GAGGAGGAGGAGGAGGTGCTCTGCCCTA
TCTGCCTCGACGCCATGGAGCCCGGCCGCGCCGTGCGCGTCCTCCCCGGCTGCAACCGCGCCTTCCACCAGGACTGCGTC
GACCGGTGGCTGGCCATCTCGCCGCGCTGCCCCGTGTGCAACGTCTGGGCCACGCCGCAGTCCCCGCGGGCCTCGCCGAC
GGCGGCCAAGACTGCTCCGGG-TCCAGGGTGCTGA---------------------------------------------
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>chr6D_1_TraesCS6D01G233300
ATTCTCAACAAATTTTATTCATCATACTTTTTATATGTGAACTCATCACTCTCCATAAGATTACTATATGATCTTTTCTT
TTTATTCTTATACCCTCAAGATGATAGGAAAAAAACAAAGCGCTCAACTCAAAACTACTTTTTATTATATAACTCTCGAA
CTCGATTACATAGATAGAGATCAAAACAATGAAAATTGAGAAAGAAACAAAAGAAAGACGGATAAAAAAAGAAAGAAAAG
GAAAAGTAGTGCAAATCATGAATGAAACAAGGAAATCGGGTGAAAACCAGAAAACCATACCACTAAGACATCAGACGAGC
GAACCTAGAGGGATAGTGGTACCCCAGCCCACGGGGGTTCAAGTCTTGGTGCTCACATTATTTCTGAATTTATTGCAGGA
TTTCCGGCGATGCGTTTTCAGTGAGAGAAAACGTTCTCGTCAACGACGATACATTATGCCGCTCAGTCTCTCGAATGTGT
TCATAGGGATAGGGTGTGCGCGTGCGGCTGTGCACATTCATACGGATGAGTGTATGCGCGTATGTATGAGCGCTTGCGTC
TACTGTGTTCAAAAGAAAACTAGAATAAATAGAGAAAACGCAAATAAAAAATAAAGTAAAATAACGGAAAGAAACTAGTA
CAGCAGGCACCACGAGCGATTTGATTTTCTTGACCGGAAACAGCGTAAGAGAAAAAAACTGGCCGGCCGACCGAGTACTA
GCGGGGGCGAAGACCGAAGGAACACTCCTGTATGCGCATACAGGAGTATAGCTTTTGCCTTTTTTTGAGAAAAGATATAG
CCTTTGCCAGTGTGGGTTGCCGGGTGCTCATTTCGCCTCTACCTGGCCTTTTCGGCCCATACGATTTGATAGCCCAGTGC
TACAGTACTTAAATGCA--ACACACCTCCGTCCTCTGCATCCCGTGCTATTTCCACGACGTCTGCCACG------CGCCT
GAGCCCGTAACTGCCACCAA----CGCGCGCTCGACGAGAGGAGAGACAGAGATGGCGCAGGTCTGGGCGGTGTTCCTGG
CCGTGGGGTCGCTCGCCATCGGCATGCTCGGGGTGCTCGGCGTCTGGCTCTGCTACCTGTTCCAGGCCGTGGCGTTTGGC
CCGCCCCCCGCCCCGCCGCCCGAGACGCCGGAGACGGTCGACGACG---A---CGACGACAAGAACGGGCTATCAGAGGC
GGAGCTGAGGCAGCTGGGCGGTGTCGTCCAGGCGGCGACCGCGAACGGC---GAGGAGGAGGAGGAGGTGCTCTGCCCTA
TCTGCCTCGACGCCATGGAGCCCGGCCGCGCCGTGCGCGTCCTCCCCGGCTGCAACCGCGCCTTCCACCAGGACTGCGTC
GACCGGTGGCTGGCCATCTCGCCGCGCTGCCCCGTGTGCAACGTCTGGGCCACGCCGCAGTCCCCGCGGGCCTCGCCGAC
GGCGGCCAAGACTGCTCCGGG-TCCAGGGTGCTGACATGGG-G-CGCGCGCGCGCGTTCTTGGTTCTTGACGATTCTTGG
TCTGCCTCTGAACCTCTGATTACGAAGCCTTCTTGACC-AACTCTAGTTAGTTTTCTTGGCTC-------------TTGT
GAGTCCCTGT------CTGCTAGTACATGGTTGTGTATAGGATTCTTGGACGGGAGACTGCATGTAGTTACTGCGATTCT
AGAAAGAAATGAGTAGGCTTTTTGCAGATTTGGTTCCTTTTTCTTC-TATCAGATCGTCACATTTGGCCGCATTGGGTCT
GTTTGATGAACGAGAAGCAGTAGATGCTGTGAA----GATAACAAATTATGATGTTGGATAGCATATCGATCCTATTAAT
CTGACGTTCTCCAATTCTGATTTTGTCGATTTTGATTCTTTCTTTGAGCTGTCGGTTGAAAACACACTGCAAACGTGTGC
TTCAGAATCTGACGCGGTTACTAACATTTGCAACCTGAGATTACAATCTATGCGGTGCTAGCGTTATGCCTTCATGGTTC
TTTAATGAGAAGATCAGCGGTTACTCTTCTGCTTAAGTTAATTTGCGATTAATTTTCAGATCAAATGCTCCATAGTTCGG
TTCTTGTTGTTGGAATATTAGGCAAGTTCATGATTAATTCCAGTAAATAATTCATGACTAGAAGAGATACTAGCATGCAA
TAATCTAGCAAACTAGAAGAACAGCAAGACATGCATAACAGCAGCAAACACGTAACAATAGCTGTAGAAACAGACATGAA
CAGATGATGTTGGACGTACTGATCGTTAGCTATTATGGGTGCGACAGTGTTGATGACGATGTTGGCGACGATCTGCTGCT
GACGGCGATGAATACGACGATGAGTAGCACCGCCCGACTTGGACGGAAGACGACCCGTGATGACGAATTTGAGCAGTCGC
TCACAACGCTTCCCAAAAACCTAATTCGTCCTCTCCCGGTGCAGGATCGGAAAGACGAACGGTTCTGGAGACCTGCTCTC
CCACGCGCCGATGCACGCCGGC
>chr6B_822
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---------------------GGGTGCTCATTTCGCCTCTACCTGGCCTTTTCGGCCCATACGATTTGACAGCCCAGTGC
TACGGCATTTAAATGCAACACACACCTGCGTCCTCTGCAT-CCGTGCTATTTCCACGACGTCTGCCACG------CGCCT
GAGCCCGTAACTGCCACCAA----CACGCGCTCGACGAGAGGAGA-ACAGAGATGGCGCAGGTCTGGGCGGTGTTCCTGG
CCGTGGGGTCGCTCGCCATCGGCATGCTCGGGGTGCTCGGCGTCTGGCTCTGCTACCTGTTCCAGGCTGTGGCGCTGGGC
CCGCCTCCCGCCCCGCCGCCCGAGACGCCGGAGACGGTCGACGACGACAA---CGACGACAAGAACGGGCTATCAGAGGC
GGAGCTGAGGCAGCTGGGCGGGGTCGTCCAGCCGGAGCCAGCGGACGGC---GAGGAGGAGGAGGAGGCGCTCTGCCCTA
TCTGCCTCGACGCCATGGAGCCCGGCCGCGCCGTGCGCGTCCTCCCCGGCTGCAACCGGGCCTTCCACCAGGACTGCGTC
GACCGGTGGCTGGCCATCTCGCCGCGCTGCCCCGTGTGCAACATCTGGGCCACGCCGCAGTCGCCGCGGGCCTCGCCGAC
GGCGGCCAAGACTGCTCCGGG-TCCAGGGTGCTGACATGGGCGCGGCGCGCGCGCGTTCTTGGTTCTTGACGATTCTTGG
TCTGCCTCTGAACCTCTGATTAAGAAGCCTTCTTGACC-AACTCTAGTTAGTTTTCTTGGCTCAGGAGAGCGGTTCTTGT
GAGTCCTTGT------CTGC---TACATGGTTGTGTATAGCATTCTTGGACGGGAGACTGCATGTAGTTACTAGGATTCT
AGAAAGAAATGAGTAGACTTTTTGCAGATTTGGGTCTTTTTTCTTC-TATCAGATCGTCACATTTGGCCGCATTGGGTCT
GTTTGATGAACGAGAAGCAGTATATGCTGTGAA----GATAACAAAC--TGATGTTGGATAGCACATCGATCCTATTAAT
CCGACGTTCTCCAATTCTGATTTTGTCAATTTTGATTCTTCCTTTGAGCTGTCGGTTGAAAACATACTGCAAACGTGAGG
TTCAGAATCTGAAGCGTCTACTAACATTTGCAACCTGATATTGCA----ACA--GTGCTAGAGTTATGCCTTCATGGTTC
TTTAATGAGAAGATCAGCGGTTACTCTTCTGCTTTAGTTAATTTGGGATTAATTTTCAGATCAAATGCTCCATAGTTCGA
TTCTTGTT------------------------------------------------------------------------
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>chr6A_903
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------------------------CCTGCGTCCTCTGCAT-CCGTGCTATTTCCACGACGTCTGCCACG------CGCCT
GAGCCCGTAACTGCCACCAA----CGCGCGCTCGACGAGAGGAGAGACAGAGATGGCGCAGGTCTGGGCGGTGTTCCTGG
CCGTGGGGTCGCTCGCCATCGGCATGCTCGGGGTGCTCGGCGTCTGGCTCTGCTACCTGTTCCAGGCCGTGGCGTTTGGC
CCGCCCCCCGCCCCGCCGCCCGAGACGCCGGAGACGGTCGACGACG---A---CGACGACAAGAACGGGCTATCAGAGGC
GGAGCTGAGGCAGCTGGGCGGGGTCGTCCAGGCGGCGACCCCGAACGGCGAGGAGGAGGAGGAGGAGGTGCTCTGCCCTA
TCTGCCTCGACGCCATGGAGCCCGGCCGCGCCGTGCGCGTCCTCCCCGGCTGCAACCGCGCCTTCCACCAGGACTGCGTC
GACCGGTGGCTGGCCATCTCGCCGCGCTGCCCCGTGTGCAACATCTGGGCCACGCCGCAGTCGCCGCGGGCCTCGCCGAT
GGCGGCCAAGACTGCTCCGGC-TCCAGGGTGCTGACATGGGCGCGGCGCGCGCGCGTTCTTGGTTCTTGACGATTCTTGG
TCTGGCTCTGAACCTCTGATTACGAAGCCTTCTTGACC-AACTCTAGTTAGTTTTCTTGGCTC-------------TTGT
GAGTCCTTGT------CTGCTAGTACATGGTTGTGTATAGGATTCTTGAACCGGAGACTGCATGTAGTTACTGCGATTCT
AGAAAGAAATGAGTAGGCTTTTTGCAGATTTGGTTCCTTTTCTTCTATATCAGATCGTCACATTTGGCCGCATTGGGTCT
GTTTGATGAACGAGAAGCAGTAAATGCTGTGAATGAAGATAACAAATTATGATGTTTGATAGCATATCGATCCTATTGAT
CCGACGTTCTTCAATTCTGATTTTGTCGATTTTGATTCTTCCTTTGAGCTGTCGGTTGAAAACATACTGCAAACGTGTGT
TTCAGAATCTGAAGCGGATACTAACATTTGCAGCCTGAGATTACAATTTACA--GTGCTAGCGTTATGCCTTCATGGTTC
TTTAATCAGAAGATCAGCGGTTACTCTTCTGCTTAAGTTAATTTGCAATTAATTTTCAGATCAAATGCTCCATAGTTGGA
TTCTTGTT------------------------------------------------------------------------
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>chr6A_913
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----------------------------------CTGCGTCCTGTGCTA-TTCCACTACGTATGGCACG------CGCCT
GAGCCCGTAACTGCTGCC-A----CGCGCGCTCGACGAGACGAGACAGAGGGATGGCGCAGCTCTGGGCGGTGTTCCTGG
CCGTGGGGTCGCTCGCCATCGGCCTGCTCGGGGTGCTCGGAGTCTGGCTCTGCTACCTGTTCCAGGCCGTGGCGCTGGGC
CCACCTCCCGCCCCGCCGCCCGACACGCCGGACACGAGCGGCGACGGCGACGGCGACGACAAGAACGGGCTATCGGAGGC
GGAGCTGAGGCGGCTTGGCGGGGTCGTCCAGGCGGAGGCCGC---CGTC---GACGACGAGGAGGAGGCGCTGTGCCCCA
TCTGCCTCTACGCCATGGAGCCGGGCCGCGCCGTGCGCGTCCTCCCCGGCTGCAACCGCGCCTTCCACCAGGACTGCGTC
GATCGGTGGCTGGCCATCTCGCCGCGCTGCCCCGTGTGCAACATCTGGGCCACGCCGCAGTCGCCGCATGCCTCGCTGAC
GGTGGCCAAGACTGCTCCGGGGTGCTGACACGG-----GGGCG-CGCGCGCGCGCTTTCTTGGTTCTTGACGATTCTTGG
TCCGCCTCTGAACTTCTGATCAAGAAGCGTTCTTGACGTAACTCTAGTTAGTTTTCTTGGCTCGGGAGAGCGGTTCTTGT
TAGTTTTCTTAGTCTGCTA----TACATGGTTGTGTACAGGATTCTTGGACGTGAGACTGCATGTAGTTACTACGATTCT
AGAAAGAAATGAGTAGGCTTTT-GCAGATTTGGGTCTCTTTTCTTC-TAGCAGATCGTCACAGTTGGCCGCATTTGGTCT
ATTTGATGAACAAGAGACAGTAAATGCCGTGAA----GATAGCAAATTATGATGTGGGGTAGCATATCCATCCTATTAAT
CAGACG----CCGATTCTGATTTTCTCGATTTTTATTC-TTCTTTGAGCTGTCGGTTGAAAACACACTGCAAACATCTAG
TTC-AAATCAGAAGCGGTTACT----------------------------------------------------------
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>chr6D_918
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---------------------------------------TCCTGTGCTA-TTTCACGACGTATGGCACATTGGCACGCCT
GAGCCCGTAACTGCTACCAC----CGCGCGCTCGACGAGACGAGATAGAGGGATGGGGCAGCTCTGGGCGGTGTTCCTGG
CCGTGAGGTCGCTCTCCATCGGCCTGCTCGGGGTGCTCGGAGTCTGGCTCTGCTACCTGTTCCAGGCCGAGGCGCTGGGC
CCGCCTCCTGCCCCGCCGCCCGAGACGCCGGACACGAGCGACAACGGCAACGGTGACGACAAGAATGGGCTATCGGAGGT
AGAGCTGAGGCGGCTTGGCGGGGTCGTCCAGGCGGAGGTCGCAGCTT------ACGACGAGGAGGAGGCGCTCTGCCCCA
TTCGCCTCGATGCCATGGAGCCGGGCCGCGCCCTGCGCGTCCT-CCCGGCTACAACCGTGCCTTCCA-CAGGAGTGCGTC
GATCGGTGGCTGGCCATCTCGCTGCACTGCCCCGTGTGCAACATCCGGGCCA---------CGCCGCAGGCCTCGCCGAC
GGTGGCCAAGACTGCTACGGG-TGCTGACACGG-----GGG-G-GGGGGGCGTGCTTTCTTGGTTCTTGACGATTCTTGG
ATCGCCTCTAAACTTCTAATCAAGAAGCATT-------------------------------------------------
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>chr6B_923
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--------------------------------------------TGCTA-TTCCACGACGTATGGCACG------CGCCT
GAGCCCGAAACTGCTACCACGGCGCGCGCGCTCGACGAGACGAGACAGAGGGATGGCGCAGCTCTGGGCGGTGTTCCTGG
CCGTGGGGTCGCTCGCCATCGGCCTGCTCGGGGTGCTCGGAGTCTGGCTCTGCTACCTGTTCCAGGCCGTGGCGCTGGGC
CCACCTCCCGCCCCGCCGCCCGAGACGCCAGACACGAGCGACGACGGCGACGGCGACGACAAGAACGGGCTATCGGAGGC
GGAGCTGAGGCGGCTTGGCGGGGTCGTCCAGGCGGAGCCCGC---AGTC---GACGACGAGGAGGAGGCGCTCTGCCCCA
TCTGCCTCGACGCCATGGAGCCGGGCCGCGCCGTGCGCGTCCTCCCCGGCTGCAACCGCGCCTTCCACCAGGACTGCGTC
GATCGGTGGCTGGCCATCTCGCCGCGCTGCCCCGTGTGCAACATCTGGGCCACGCCGCAGTCGCCGCAGGCCTCGCTGAC
GGTGGCCAAGACTGCTCCGGGGTGCTGACACGG-----GGG-G-CGCGCGCGCGCTTTCTTGGTTCTTGACGATTCTTGG
TCCGCCTCTGAACTTCTGATCAAGAAGCGTTCTTGACGTAACTCCAGTTAGTTTTCTTGGCTCGGGAGAGCGGTTCTTGT
TGGTTTTCTTAGTCTGCTACTAGTACATGGTTGTGTACAGGATTCTTGGATGGGAGACTGCATGTAGTTA--------CT
AGAAAGAAATGAGTAGGCTTTT-GCAGATTTTGGTCTCTTTTCTTC-TAGCAGATCGTCACATTTGACCGCATTTGGTCT
CTTTGATGAACGAGAAACAGTAAATGCCGCGAA----GATAGCAAATTATGATGTGGGATAGCATGTCGATCCTATTAAT
CAGACG----CCGATTCTGATTTTGTCGATTTTTATTCTTTCTTTGAGCTGTCGGTTGGAAACATACTGCAAACGTCTGG
TTCAAAATCAGAAGCGGTTACT----------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS------------------------------------------------S----------
---S-S-S-------------------S----------------------------------------------------
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---------------------S----------------------------------------------------------
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------------------------------------------S-------------------S-----------------
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------S-------------------------------------------------------------------------
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----------------------S---------------------------------------------------------
-S-----------------------------------------------------------------------------S
------------S----------------------------------S--SSSS--------------------------
-------------------------------------------------------------------------------S
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS
>forward_524
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------------------------CGGCTGTGCACATTCATACG------------------------------------
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>reverse_2280
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---------------------------------------TGCGACAGTGTTGATGACGA---------------------
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