>input_sequence_79775
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------------------------------------------------------ATGGAGAAGGTGGAAGGGCTTCTGCG
TAACCTGAAGCTGTCTGACAAGGAGAGAAAGAGCATCAAGATTGGTTGGACTGGATCTGGGAAGGAGGGGGTTGTGGAGC
CGCAAGCCCTAGCAAAGCTACTGTCGGAGAAACCAGTGTTCGAGGAGGCGATGGCGGAGACACTGGGCAGGATCTGGTGC
CCTATCAGGGGGGAGGATTGTAAGGAAGTTGGGGAGAATACTTTTTTGTTCACGTTTGGGCAAGAATCGGGTAAGAGGAT
GGCGGTGGAGGGAGGTCCATGGGAATTTGGCAACGATCTTCTTGTGTTTGAAGATTTTGATGCGAGCAAGCGGCTGGAAG
ATTATGCTTTTGAGACCATCCCAATCTGGGTTCGTGTGATGAGACTACCGCTAGGACTGATGTGTAGAGATGCAGGTGAA
AAAATTGGTGCGGAGATTGGTGAGGTCTAG--------------------------------------------------
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>chr5D_1_TraesCS5D01G431600
AAATTAGATCAACTAAGCTACACGAGATCGACCAAAACCA--------ACTAGACAGGATCTATCAAACATGGACACCTA
GAGCAGTGAGGCAGTGACACGGAATCGATCAAACAGGAACATGCCGCCTTCAACAACATCACTTGCTATGTCAAAGACAG
CTTCTCCACAACAGCAGCACATTCCTCCGAGGTAAGGCAACAAGTAGCACGAACAACCATGCGCCGAGTAACCGCAGAGT
CTACTACACGGCCAACAGTTCGCCGGACCAGACAAATACACGGCGCT-GCAGCCGGATTACGCGGCCACAAACCCCTACA
GATTTGGATGGGGGG-ACTTACGCCATGTCTCGAGCTCCGAAGACCGAACCGAACCTCGCGCGCGTAGATCTGCAACAGG
GAGAGGAGATTCGAGGATTAGCGAGACGGCGGACGGAGGAAGATAAGAGATGCGGAGGCTGGGAGGAGAAGAGGGGCTCA
GCGCCGCCACCCACCTGTTGGGGGCGGAGGGACTCGGCGCTCCTGGGAGGCAGGCTAGGGTTTCGTCTGGGGTTTGGGGA
GGAGGGC--GGAGGCCGACGGGTCGCGGCTTTTGTTGTCGCTCGGCGGGGCCTG-CCGGCGGGCCGCGCGAATGTAGAGG
TGCGTTGGGCCAGTGGGTGTTGGGCCATTTCTACGAAAAGCCTTGTTTTAGACCCGTGAGAAGCCTCATCTCTGCTTATT
CTTTTC-TCTCTCTCTGGTTCTTTTGCGACGTGATCCTCGTTTTATTATTTGTATATAAAAATGAAAAAATATGGGAGGC
CTGTCCGCCCCACGTGTGGCGGTTTCGTTTTTGTTCTCCCTCTCTAGGCGACTTCGAGGGCGACCTAGGGTTTCCCTGCC
GCCTTCGTCCCGTTTTGATCACCCTCTTTTCCATCCAATCACCAATTCCCACGCAAAGGCTTTCGTGAGTGCTAGGGCTC
GCGATCTTAAAACACTGTTTTCCCTAGTGTCAGTTCCAAGGTGTGAAGGAGGCGATGGAGAAGGTGGAAGGGCTTCTGCG
TAACCTGAAGCTGTCTGACAAGGAGAGAAAGAGCATCAAGATTGGTTGGACTGGATCTGGGAAGGAGGGGGTTGTGGAGC
CGCAAGCCCTAGCAAAGCTACTGTCGGAGAAACCAGTGTTCGAGGAGGCGATGGCGGAGACACTGGGCAGGATCTGGTGC
CCTATCAGGGGGGAGGATTGTAAGGAAGTTGGGGAGAATACTTTTTTGTTCACGTTTGGGCAAGAATCGGGTAAGAGGAT
GGCGGTGGAGGGAGGTCCATGGGAATTTGGCAACGATCTTCTTGTGTTTGAAGATTTTGATGCGAGCAAGCGGCTGGAAG
ATTATGCTTTTGAGACCATCCCAATCTGGGTTCGTGTGATGAGACTACCGCTAGGACTGATGTGTAGAGATGCAGGTGAA
AAAATTGGTGCGGAGATTGGTGAGGTCTAGGAAGTGGATGCATGGGATGATGGAAAAGCGGTGGGCAAATTTCTCAGGAT
AAAGGTTAGGATGAACATCAAAGTTCCTCTCATGCGGGGTTTCATATTGGATGATGGACAGGAGGATACAGGTGGCAGTG
ACGTTAGAGAACATAGAGTGACGATGGAAGAGGAGGAGAAGAATTGGTGCCCGTTTGAGTACGAGTACCTTCCTGATTTT
TGCTATACCTGTGGGATCATCAGTCATGTGGACAAGGTGTGCGGCATAAAACTGAAGAAGGGAGAAAGACAACAGTTTGG
CTCGTGGCTGCGAGCGTTCATGCCAAAGCGGGGGTATGTAGAAGGAAGGAATAAGTGGGGAGATAGCCGGTCAAGCTCGA
GGGGGCGGGGAATGAGCAGCGGGGGTTTGGATCAATGGAAGGGGAGATCTTTGTCGGGGAGTGACGCGCCGTCTTGGAGA
AAGAATGCAAAAGGCTGGAGCGATATTGCTGACGAGGAGGAGAGAAGGAAAGAGGTAGCTCATTTGGTGAAGGGAGGGGC
TGGAGCAGGGCGGGGCATGCCGAATCGCCTGGCTTTTTGCCGGAGAGTGGAGTGACAGGAAAACAGCAAGAACCGATGGA
GTTTGGGAAGGATGGGAGTGGGTGTCAGGGTGCAGCGACCGAGGCATTGCAGCTAAAGAACACGCAGATTGATGTGCATG
CGGGTTCAGGAGGAACTTTGGTGGGGGCAACGCATATGGCTCTCATTGGTTGACGGCTATGGGCATAGTACGACCAAGGG
AGAGGATATGATCAAGGGAACTATGCTGAGCCAAAGTGAGCCTGGGAATATTGACGCCATGCAAGAGGTAGGTATGCAAA
TTGACAAAGACAGTGAAAGGAATGTAGAGAAGGTCTCCAATCAGAAAGGTGTGAGTGACAAAACTGGGGGACGCTACAAG
AAATTAAAAGGCCGAGATGGGCAAGGTTTAGCAAAGGATAAGAATGTGAGGATAACAGATGTAAAGGGGA
>chr5A_1
AAATTAGATAAACTAAACTACACGAGGTCGAGCAAAACCAATTAGGCAACTAGACAGGATCTATCAAACATGAACACCTA
GAGCAGTGAGGCAGCGACACGAAATTGATCAAGCACGGCCATGCCGCCCTCAACAACATCACTTGCTATCTCAAAGACAG
CTTCTCCGCAACAGCAGCACATTCCTCCGAGGTAAGGCAACAAGTAGCACAAACAAACGTGCGCCGAGTAACCGCAGAGT
CTACTGCACGGCCAACAGTTCGCCGGACCAGACAAACACACGGCGCT-GCAGTCGGATTACACGGCCACAAACCCCTACA
GATTTGGATGGGGGGAACTTACGCCATGTCTCGAGCTCCGAAGACCGAACCGAACCTCGCGCGCGTAGATCTGCAACAGG
GAGGGGAGATTCGAGGATTAGCGAGGCCGCGGACGGAGGAAGATAAGAGATACGGAGGCTGGGAGGAGAAGAGGGGCTCA
GCGCCGCCACCCACCTGTTGGGGGCGGAGGGACTCGGCGCTCCTGGGAGGCAGGCTAGGGTTTCGTCTGGGGTTTGGGGA
GGAGGGC--GGAGGCCGACGGGTCGCGGCTTTTGTTGTCGCTCGGCGGGGCCTGCCCGGCGGGCCGCGCGAATGTGGTGG
TGCGTTGGGCCAGTGGGTGTTGGGCCATTTCTCCGAAAAGCCTTGCTTTAGACCCGTGAGAAGCCTCGTTTCTGCTTATT
GTTTTCTTCTCTCTC-----------------------------------------------------------------
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>chr5B_1
AAATTAGATAAACTAAGCTACACGAGATCGACCAAAACCAATTAGGCAACTAGACAGGATCTATCAAACATGAAGACCTA
GAGCAGTGAGGCAGCGACACAGAATCGATCAAACAGGAACATGCCGCCCTCAACAACATCACTTGATATCTCAAAGACAG
CTTCTCCACAACAGCGGCACATTCCTCCAAGGTAAGGCAACAAGTAGCACAAACAAACGTGCGCCGAGTAACCGCAGAGT
CTACTACACGGCCAACAACTCGGCAACCAAGACAAATACACGGCGCTTGCAGTCGGATTACGCGGCCACAAACCCCTACA
GATTTGGAT-GGGGGAACTTACGCCATGTCTCGAGCTCCGAAGACCGAACCGAACCTCGCGCGCGTAGATCTGAAACGGG
GAGAGGAGATTCGAGGATTAGCGAGGCCGCGGACGGAGGAAGATAAGAGATGCGGAGGCTGGGGGGAGAAGAGGGGCTCA
GCGCCGCCACCCACCTGTTGGGGACGGAGGGACTCGGCGCTCCTGGGAGGCAGGCTAGGGTTTCGTCTGGGGTTTGGGGA
GGGGATGCTGGAGGCCGACGGGTCGTGGCTTTTGTTGTCGCTCGGCGCTGCCTGCCCGGCGGGCCGCGCGATTGTGGAGG
TGCGTTGGGCCAGTGGGTGCTGGGCCATTTCTTCGAAAAGCCTTGTTTTAGACCCGTGAGAAGCCTCATTTCTGCTTATT
CTTTTC-TCTCTCTCT----------------------------------------------------------------
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>SNPs
---------S--------------------------------------------------------------S-------
--------------S---------------------------------S--------------------S----------
--------------------------------------------------S-----S-S---------------------
----------------------------------------------------S---------------------------
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-------------------------S-S----------------------------------------------------
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---------------------------------------------------------------------------S----
--------------------------------S------------------------------------S----------
----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_939
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---------------------------------------CACCAATTCCCACGCAAAGG---------------------
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>reverse_2145
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----------------------------------------------------------------CAGATTGATGTGCATG
CGGG----------------------------------------------------------------------------
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