>input_sequence_79759
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------------------------------ATGTCGTCAACGTCGTCCAAGCCGAAGAGAGCAGGCGGCCTCCGGGGCCT
CAGGCCGCAGCCGCTGAGCCTGCCGGCCCGGCCGTCCAAGAAGCCGC---------GCCACGCCGGA---CCA------G
CC------GGGCCCGTGATCGTGTACGAGCGCACGCCGAGGGTCGTCGACGCCGACCCGCACGAGTTCATGGCCGTCGTG
CAGAGGCTCACGGGCAATTGCAAGCAGCGGCCGT------------------------CGACGGCGGCCACGACGCTGCC
ACCAGAGGCGTCGTCCGGATCCGGAGCTGCTAGGGACGGCAGGGCCCCGACGT---------------CTTTGGTTCTCA
CGCTTGGCCAG---CAGCAGCCTGCGCCGTGCGGTGG---TGATCATCATCCGGAACCTTCTGCTTCCCCGTCTGCCGCA
TCG---------TCGCTGCTGTCCCCGAGCAGCTTCTTCTTCTCCCCGGCCACCATGCAGGCGATACGAGAGCTCATCAG
CTGA----------------------------------------------------------------------------
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>chr4A_1_TraesCS4A01G411100
ACTGAGTTCCAAAACAGATGACGCTTACTTCAAAAACAAAAAC-------------------------------------
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--------------------------AGATGACGCTTTACAAGGGTTGTAAACAAACTTCTCTCCAGTTAAAAGCTGGTT
AATTGTTCTTCTTCTAAGAGGAGGTTGAAACCCTCGGTTTCTCTGCATCATTGCAA-----ACAACTATATTTATTAGAG
CTGATGTAAATCACTACATATGGTCGGGGTAATACATTTACAAAAAAAAAACAGAGTATATAACATAGATAAGTACAACA
GATCGAATTGTAACAAGATATGGAATTATCACATACGATTCAGTTGGC-TCTTCCGGAGCAACACCTTTAAGAAGGAATA
AACGTCCTTGTGTCACC-----------GTCCGATTAAAAACGACTGAGACAA-GGATTTTCATCATAGTT-ACTATTGA
GACCAACCACTGAATGCCGGCACATCGGTAGGGAGACAACGTCTTCAACAAGATAATGGCGTAAGTTGGCCACTGCTG--
-AGCCCAACCAATCA---CGGACATGAAGCGGTTCTTCACCCTGGACATGAAGCGGTTA-------------GGTGG---
---------------------ATGGGTCATAAAACTAGTTAC---ACAACACAAACATTTA---TTTGATTCCCTTCGTG
CCGTACCTTCTCATACAAAAGGTAGCGATCAATGTTAACAA----CG---TACAAAGTAAAACACAACAC-----TATCT
ATTTTTGTATAA--GTATATATAGTACATATACCAACAACTCACCACGCAC-----GAAACTCACC-GATAATTTAAAGT
AA-----GTACA-TACACATACCAACAACT---TCCATACG-GAGGA---AGCGACACTAGTTTATTCCCATCTCTGACC
CTTTCTTGTGCACGCAGAATCG----CAGCCATGCAC--GGAGGGC---AACAAGTCCAAGTTCGGCTCACCATTTCTCT
TGCCATCATCATCATGCCCTCACCACGGCGACGCC----CCTATATAAGCT----TT--GATGCCGCCGTGCGTA--GGA
GTAGGACCCAACTTAAATCTGCTTCCAAAGACAAGT---------------AGA----CAACCTACGACAGACACACG--
------------------------CACGCCATGTCGTCAACGTCGTCCAAGCCGAAGAGAGCAGGCGGCCTCCGGGGCCT
CAGGCCGCAGCCGCTGAGCCTGCCGGCCCGGCCGTCCAAGAAGCCGC---------GCCACGCCGGA---CCA------G
CC------GGGCCCGTGATCGTGTACGAGCGCACGCCGAGGGTCGTCGACGCCGACCCGCACGAGTTCATGGCCGTCGTG
CAGAGGCTCACGGGCAATTGCAAGCAGCGGCCGT------------------------CGACGGCGGCCACGACGCTGCC
ACCAGAGGCGTCGTCCGGATCCGGAGCTGCTAGGGACGGCAGGGCCCCGACGT---------------CTTTGGTTCTCA
CGCTTGGCCAG---CAGCAGCCTGCGCCGTGCGGTGG---TGATCATCATCCGGAACCTTCTGCTTCCCCGTCTGCCGCA
TCG---------TCGCTGCTGTCCCCGAGCAGCTTCTTCTTCTCCCCGGCCACCATGCAGGCGATACGAGAGCTCATCAG
CTGAGGCGAC-AGTGCTTTGTTCTGACTTCTGAGCCAGCTTGTGAAAATTGAGGATCGGTTGGCCCGGGTGATGTACTGA
GGATCGTATATCTGCACAGTACATACGTGATACGTGTAATTGTCTTAGTTTGTTCACCAATTTTCC--TTTTCTCCTTCT
CTGTCGCCACAATACAATTCTTAATTACTATGTTAATTAGAGTTTAGCGCTCACACATTGATAAGTTGCATTCATTGTTT
CAAATTTCACTTCCGAAAAAAAGTTCGAGCTTAACTGAAATGCCTGAAACTTCTATATTTCCAGCCTTTGGGGTCTTTGG
TCAAGTAATGTCTTCACCTTCTTGTGCTGCAACGATAACATTTTAGAACGTCTTGAGTTTAGCTGTTCGTTAGGGCGTGT
CTAACCGACCCCTTAGAAAATAGAGGAGTAAACCTTAGTGGAGTATATTTGCTCCACTAAATTTTGGCCGGACCTAGCCA
GCCAATCCCCTATATATAATGGAGTAAACTTAAATTTGACTCATACATTTCGTCGAACACTTGTTATGCACCTCCATGGC
GAGTGGCAGCCATGGTGACCACGCCGGCGGCAGGCAACTGGAGGA-----------GGAGGAGTAGCAGCATGCACCGGC
GGCGACGAGCAGCAGCAAAGGCACGCAACTCGGAGGA--------------------------------GGAGGAGCAGC
GGCGAGCAGTAGCAGCAGCACGCACCAGCGGTGGAGCAGCGGTACGTAGTAGCAGCACACACCGGCGGCAAGTAGCGGCA
ACACGCACCGGCGGCGGCGAGCAGCAGCGGCAACACACACCAACGGTGGCAAGCAGCAGCAGTAGCAGCAACAGCACACA
CCGGCGGCGGCGGGCAGCGGCAAAACGCAGTAGCGAGGCACAGCAGCAGCAGCAACATTTAGTGGCCGTACCGGTAGTAG
TACGGGCAGGGGTTGCCGGCGAGGCCATGGGAGCTTCAGGTGAGTCGCCAGCCGC-------GAGGTCTTTGCGTGAAGA
GAAATTATACTCAGCCG---------------------------------------------------------------
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>chr4A_39
CCCCTATATAAGCATTAACGACGCCGTGCGTAGGAGTAGGACCAAATTAAATCCGATTGCAAAGACAATACACAACAGAG
GGTCAGAGACACAACACACACGCCATGTCGTCGATGTCGTCCAAGCCGAAGAGAGCAGGCGGCCTCCAGGGCCCGAGGCC
GCAGCCGCTGAGCCTGTCGGCACGGCCGTCGAAGAAGCCGCGCGTCGGCGGCCACGCCGGACCAGCTGCCGGGCCCGTGA
TCGTGTACGAGCGCACGCCGAGGGTCGTCCACGCCGACCCACACGAGTTCATGGCCATCGTGCAGAGGCTCACGGGCAAT
TGCAAGAAGCAGTCGTCGACCGGAGCTCGGGACGGCAGGGCCTCGACGTTGACCGCCGCAGACGCCTTGGTTCTCACGCT
TGGCCAGCAGCAGCGTGCGCCGTGTGGTGCTCATCATCCGGCACCTCCTGATTCCCCGGCTGCCGCATCACCGCTGCTGT
CCCCGAGCAGCTTCTTCTTCTCCCCGACCACCATGCAGGCGATACGGGAGCTCATCAGCTGAGACGACAAGTGCTTTGTT
CGAGTCGATCAGCTTGTGAAAATTGAAGATCGGCGAGGGTGATGATCATATGGACAGTACTTGTCTTAGTTTGTTCACCA
ATTTTCTCTCTTCCTCTCTCTAGCCACTGTACGATTCTTACTAATTATGTTAATTAGAGTTTTACACACACACAATGATA
CATTGGGTTCATTGTTTCAAATTTCACTTCTGAAATATTTTGAGCATAACTGAAATGTCTGAAACTTCTATACTTTAGGC
TTCGGCGTCTTTGGCCCAAACCGCCGCCTCCGCTGCAACCACGGCTCATCCCTGCCGTCTAGCTTAACTCCATGCATTTG
GTTTATTTGGTTAACATGGTTCGGTTTATATGAGTTTTCAGTTTGTATGGTATTAATACTTTAGTAAATACGACATGAAA
TATAAGTAAGGTTCAGTTTCAGTATATACCATAATAATCAAAGTTGACGCGAATTTAAAAATGACATAATAATAATTTAC
AAATTTATGACTCAAAATACATACTTCAAACAATATATGCATGCACAGATTCATGCCTTGATGGTCATGGGCGTGCTTAG
CTTGTTTTTAAGAGAAAAATGACTACGTCACAAGAAAAAGAACATGCTTAGCGGGGAATCTAGCTCTTGTACAAGAAAAA
TGACAACTTGTATGATTGTTCATCTCAAGAAATATAAATATAATATAAATATGAATATATTTATTTTGGTTTATTCGGTT
AACCGTTCAGTTTTTAGTATATACCATAAAACTCAAAATTCAAAACACTATGGAAAATCCATACCATACTAGAACCAGAA
AGCATAAAAACATAAAATTGGTTAGGTTTGGTTTATTGTTGGTATGTTTTTTTGGTTTGGTTTTAAAATGCACGGAGTGA
CTCTCGCTCTCCGCACTCGCCCATGTCTCCGTAGGTACGTCCAGCAGATGGATGGATCGATGGGCGTGTGTGTTTGTGTT
TACATCCTGTTTACATCAATTCCTGCAGGTCGGCGGCGGCTATAACGCCGGAGAAGCTACTACCGCTGCACACGGCGGTG
GAGTCTGCGCGCCTTAGGTCCTGCATCGCCATCCGCCTACTGGAGCTCGCTCTCCCAAGTTAGACCCCTGAGCACATGTT
GAGCCCTGTTGGTACTGCCATGGATATGTCATATGTGACAGCTATTGCGCCTATGCGCCTAGGAGTAAGAGATTGGATGG
TGTTGATGCTACGGGAGTTAAGAGTCTTTCAGTAAGGAAATAGTACTATAAATTGTTATCGTGGAGTTAAATGTGTGTCT
AAATGACAGTGGTGTTCACCTCCTACTCCTTATTTTTTTTGAAAAGGATAACACCTCAAACATAATGAAAATTACATCGA
GACTTCAAGACTACCGAACGATCATTAATAGCCACCGGAACGAGCTACCGACGCACCGCTATCGTCGCCCCTCCTACATT
GTGATAATGTTTTTAGAACACCTTGAGGTCTGCTGTTCATTAATACCTGTTGGCTCATTTTTTATGAAGGTAGTTACTCC
CTTCGTTCGGAATTACTTGTCTTAAAAATGGATGTATCTAGAACTAAAATACATCTAGATACATCCATTTCTACGACAAG
TAATTCCGAACGGAGGGAATAGTAATTAATTAACACTCATCGGTTTAGCACCAAGTTGATAAACAATCTCTTTGTTTATG
CACCAGAGGAAAGGATGGGATGTCTATGTCTATCTATTGAATGTGGTTGTCATATGTTTTCAAAAGTGCATCTAAACATG
GTGACTTTGTTTATTTAAAATATACGTCAGTCAGTTGCACATACATAGTTTTGGAGATATTTTACCAAGTATAATTTGTA
GTATTAGGTTGATCCAATGATTAGCACTAGCCGGTCAGATTTGACTAAAGGACATGTTGGTAATTCCTTATCAGGGGTAG
ATTTATAATTTTCTAGTTTTAATTGTAATGATAATGGCAAATCTATCCTTAGGGAGGTCATACAACACGTGATTTTTTTT
CTCCCCTTCCCCTCGGCGGCAAGGGTGAACTCTCCCTTATAGGCTTTGTTGGCAAGCCCGTGGGTCCACGTCCCCTCTGA
CTGCCGCTGGGAGGGTAATCCTTTTTTTAAGGAAGTGGAGGGAAATATGTACAGTGTTGCATGTTTTGAAAGGGGACACG
TGCGTCGGAAACCCCAAGATCTAAAGAATCACACTAAGTGCCGCATACTAACTACTTATGAATTTGGATCGCTTTTGGCT
GGAAGGCCAGATTGCACTGCATGATCTCCTTGAAGGTTAGGTGTGTCACCTCGATGTAAGTCAATCTTGTGCCTTCGAAG
ATTCATCGGTTCCTCTTTTTCCAGGCAGTCCTGGTGCCTTAGCTCTAGCTAGTAGTTTAAGTTGAGATGGACTTGGTGCA
ACTCGCCGACGCTTCTCCTCCATTCTACACGCAGCATGCTGCCTCTATTCCTCCGCCGCCCTGCCCCTCCCCCAGGCCCT
CCGTCATTCTTCTACTGTGTTTGTGAAAACAGTTCCTAGAATCTTCGCACAGCCTGCAATTCAGAAACAAACAAAAAAGT
GGCTAGTTGGACACTATTAGTAGAACCTTTCCGTCGGACGTGGAATTTCTACACCTGAGCTCATATGCTCCTGCCGTGAA
CAGTAAAATAAATAAAATAGAAAAACATTTCAAAAAATTCTGAAAAAAAATTGTGGCATACTTTAAGAAATGTTTGTTGT
GCATGCAAAATTTCATCACGAAATGACATTGATGGAAGGCATGGTAAAAAAACAAAATCGATACTATGTAAATGTTACTT
TCAAACGCATTTTGGAGCTTTTTTTGTTTTTTTTTTTGCCACGACTTCCACGAATGCGATTTCGTGGTGAAATTTTGCAT
GCACAACAAACATTTCTTAAAGTATGTCATAAAAAAATTTCAGAATTTTTTAAATGTTTTTATATTTTATTTAGTTTACT
GTTCACATCAGGAGCATATGAGCTCAGGTGTAGAAAGGTACTTTTGCTTTCTGTCAGTCTTTTTCAATAAATAACACTGT
CCTTTCCTGGCAGGCAGCAAATTCTTCAGGCAAATCAGGTTGTGGTGTGTATAGCTGCCTACCAACGAAACATCATTTCG
TTGTAAAGGGTAAAACGTAATCAGAAGACACCTGGCTTCCTGCCTGCTTCCTCTGCGCGTGTGTTCGTCTGACCTGGAGC
TAAGCTGGAGTATTTCCCTGACCTATTTCCTTCTTCCTTCCTCGCGTCATCCGGTACGTAAAGCCTAGCCTAAAACGTTT
TACAAATCCAACAATAATAATCACTAGATCTAGTAGTTAATTAAGCCGCTAGCATCAAACTCGCGTGTTAAATGCAGCTC
AAATATGAAGCCATGCATGCGCACAGCATGCGCCGTACAGGAAGAAGCAGAATCCACAGATGAACTAACTAAACTACTAC
TACCTCGTATATGTGTGTGTATTATAGTCGGCTCCGGTCTGTGTTGAATGAATGATTGATGTTGCGCAATCTTATCCTTA
CAATACTACCACCAATTAACTAGCATATACTCCTATGTCATTTGTCATGCATACGTACGTCTGCTGGCTGCTAGATGCAG
ATCATACACCCACTGAGTTCCAAAACAGATGACGCTTTACAAGGGTTGTAAACAAACTTCTCTCCAGTTAAAAGCTAGTT
AATTGTTCTTCTTCTAACAGGAGGTTGAAACCCTCGGTTTCTCTGTATCATTGCAATGCATACAACCATATTTATTAGAG
TTGATGTAAATCGCCAACAAATAGACTATTGAC--------------------------ATAACATAGATAACTACGACA
GCGTCGTATTG-------------ATTAACACTTACAACTTGGTTGATATCTTCCACAACAACGTCTTCAAGAGGGAATA
AACTTCGTCCTCATGCTGTTGTCGCCACATCTGACCACAAACGACCAAGATAA-GGATTTTCATTCTAGTT-ACC---AA
GACCAATCACCGAATCGAC---------TAGCGAGACAACGTCTTCAACAAGGTAAGGACGCAATCTCGCCGTTGTTGAG
C--CC-AATCAATCA---AGGTCAGAACAAGAGTCTTCACCCAG-ACATGAAGCAGTTTTTTTTTTTTGCAGGGTGGGCT
ACA--GAAATAGTATCATTTGATTGGCCATCAAACTAGTTTCACAACAACATAAACATTTA---TTTGATTCCCTTTGTG
CCGTACATTATCATACAAAAGATAGCCATCAATGTTAACAGTGTGCG---TACAAAGT--AAAACAACAC-----TATCT
ATTTTATAGTAT--GTATAATAATGGAGGCATGAC-------------CCCGGCCGGAAACTCGTC-GATAATCTAAAGT
ATA-------------------CAACAACTTCTTCCATACGCGAGGA---AGTGACGCTAGTTTATCCATATCTCTGACC
CTTTCTTGTGCACGCAGAATGG----CAACCATGCACACGGAGGGTAGTAGCAGGTCCAAGTTCGGCTCACCATTTCTTT
TGCCATCC------TGCTCTAACCACGGCAACGCC----CCTATATAAGCA----TT--GATGCCGCCGTGCGTA--GGA
GTAGAA-CCAGATTAAATCCGCTTGCAAAAACAACCTA-GGA--------CAGAGACGAACAC----ACACACGCACG--
------------------------CACGACATGCCGTCGACGTCGTCCAAGCCGAAGAGAGCAGGTGGCCTCCGGGGCCT
CAGGCCGCAGCTGCTGAGCCTGCCGGCCCGGCCGTCCAAGAAGCCACGCGTTGGCGGCCACGCCGGAC---CA------G
CC------GGGCCCATGATCGTGTACGAGCGCACGCCGAGGGTCGTCCACGCCGACCCACACGAGTTCATGGCCGTCGTG
CAGAGGCTCACGGGCAATTGCAAGAAGCGACCGT------------------------CGATGGAGG-------------
-----------------------------------------------CGACGT---------------CTTTGGTTCTCA
CGCTTAGCCAG---CAGCAGCGTGCACCGTG---TGGTCATGATGATCATCCGGAACCTTCTGCTTCCCCGTCTGCTGCA
TGG---------TCGCTGCTGTCCCCGAGCAGCTTCTTCTTCTCCCCGACCACCATGCAGGCGATACGGGAGCTCATCAG
CTGAGACGACAAGTGCTTTGTTCGAGTCGA----TCAGCTTGTGCAAATTGAAGATCGG----CCCGCGTGATGA-----
---TCATAT------------GGAC---------AATACTTGTCTTAGTTTGTTCACCATTTTC---TC--TCTCCCTCT
CTCTAGCCACTGTACGATTCTTACTAATTATGTTAATTAGAGTTTTGTACACACACAGTGATAAGTTGGATTCATTGTTT
CAAATTTCACTTTTG-AAAATATTTCGAACATAACTGAAATGTCTAAAACTTCTATAATTT-CGGATTCGGTGTCTTTGG
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>chr4B_343
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-----------------------GTCACGTCCAACCAAAAAGGATGAAGACAAGGGTTTTTCATCATAGTT-ACT---GA
GGCCAACCACTAAAGGCCAGCACATCGGTAGGAAGACAACGTCTTCAACAAGATAACGACGCAAGTTCGCCGCTGTTG--
-AGCC-AACCAGTCA---AGGTCAGAACAAGACTCTTCACTCAGCACATGAAGCAGTTA-------------GGTGGGCT
AGGTGGAAATAGTATCATGATATTGGCCATAAAACTAGTTGC---ACAACATAAACATTTA---TTTGATT-----TGTG
CCATACATTCTCATACAAAAGGTAGCGGTCAATGTTAACAA----TG---TACAAAGTAAAACACAACAC-----TATCT
ATTTTAGTATACTAGTATAATAACCGAGCGATTGC-------------CAC-----GAAACTCATC-AATAATTTAAAGT
AATAGAAGTACTCTACACACACCAACAACTTCTTCCATACG-AAGGA---AGGGACACTGGTTTATCCCCATCTCTGACC
CTTTCTTGTGCACGCAGAATCG----CAGCCATGCACACGGAGGGA---AACGAGTCCAAGTTCGGTTCACCATTTCTCT
TGCCATCC------TGCTCTAACCACGGCGACGCC----CCTATATAAGCA----TT--AACGACGCCGTGCGT------
------------------CCGCTTGCAAAGACAATC---------------CAC----AACAG----AGACACA------
-------------------ACACACACGCCATGTCGTCGACGTTGTCCAAGCCAAAGAGAGCAGGTGGCCTCCAGGGCCC
CAGGCCGCAGCCGCTGAGCCTGTCGACCCGGCCGTCCAAGAAGCCACGCGTTGGCGGCCACGCCGGA---GCA------G
CC------GGGCCTGTGATCGTGTACGAGATCACGCCGAGGGTCGTCCACGCCGACCCACACGAGTTCATGGCCATCGTG
CAGAGGCTCACGGGCAATTGCAAGCAGCGGCCGTT------------------------GACGGCAGCGACGACGTGGCC
ACCAGAGGCGACG------TCCGGA---GCTAGGGACGGCAGGGCATCGACCTCGACGGCCGCGGACGCTTTGGTTCTCA
CGCTTGGCCAA---CAGCAGCGTGCGCCGTG---TGG---TGGTGATCATCCGGCACCTTCT---TCCCCGGCTGCCG--
-CAT---CA---CCGCTGCTGTCACCCAGCAGCTTCTTCTTCTCCCCGACCACCATGCAGGCGATACGGGAGCTCATCAG
CTGATACGGCAAGTGCTTTGTTCGAGTCGA----TCAGCTTGCGAAATTTGAAGATCGG----CCCGGGTGATGA-----
---TCATAT------------GGAC---------AGTACTTGTCTTAGTTTGTTCACCAATTTTCT--C--TCTCCCTCG
CTCTAGCCACTGTACGGTTCTTACTAATTATGTTAATTAGAGTTTTGCACACACACATTGATAAGTTGGATTCATTGTTT
CAAATTCCACTTTG---AAATATTTCAAGCATAACTGAAATGTCTGAAACTTCTATAATTT-AGGCTTCGGCGTCTTTGG
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>chr4D_368
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-----------------------------------------------AGACAA-GGATTTTCATCCTAGTTTACC---GA
GATCAATCACTGAAGGTCAGCACATCGGTAGGAAGACAACGTCTTCAACAAGATAACAACGCAAGTTCGCCGCTGCTGCG
C--CC-AACAAATCA---AGGTCAAAACATGGGTCTTCACCTTGGACATCAAGCGGTTA-------------GGTGGGCT
AGGTGGAAATAGTATTATTAGATTGGCCATAAAACCAGTTCC---ACAACATAAACATTTAGTATTTGATTCCCTTTGCG
CCATACATTCTCATACGAAGGGTTGCGAT---------CAA----TG---TACAAAGTAAAACACAACAGTACAATATCT
ATTTTAGTATA-TAGTATAATAGCGGATGGATCAC-------------CAC-----GAAACTCATC-GATTATTTAAAGT
AAAGT-AGTACA-TACACATAGCAACAACTTCTTCCATACG-GGGTAGGAAGGGGCACTAGTTTATCCCCAGCTCTGACC
CTTTCTTGTGCACGCAGAATCG----CAGCCATGCAC--GGAGGGA---AACAAGTCCAAGTTCAGCTCACCATTTC---
----------------------------------C----CCTATATAAGCA----TT--AACGACGCCGTGCGTA--GGA
GTAGAA-CCAAATTAAATCCGCTTGCAAAGACAATCCT-CAA--------CAGAGACACAAC---------ACACACG--
------------------------CACGCCATGTCGTCGACATCGTCCAAGCCGAAGAGAGGAGGTGGCCTCCGGGGCCC
CAGGCCGCAGCCGCTGAGCCTGTCGGCACGGCCGTCCAAGAAGCCGCGCGTCGGCGGCCACGCCGGACCAGCT------G
CC------GGGCCCGTGATCGTGTACGAGCGCACGCCGACGGTCGTCCACGCCGACCCACACGAGTTCATGGCCGTCGTG
CAGAGGCTCACGGGCAATTGCAAGCAGCGGCCGT------------------------CGACGGCGGCGATGACGTTGCC
ACCAGAGGCGACGTCCGGATCCGGA---GCTAGGGACGGCAGGGCCTCGACGTGGACAGCAGCGGACGCTTTGGTTCTCA
GGCTTGGCCAG---CAGCAGCGTGCGCCGTG---TGG---TGCTCATCATCCGGCACCTTCTGCTTCCCCGGCTGCTGCA
TCAT---CA---CCGCTGCTGTCCCCGAGCAGCTTCTTCTTCTCCCCGACCACCATGCAGGCGATACGGGAGCTCATCAG
CTGAG---------------------------------------------------------------------------
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>chr4B_368
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-----------------------------------------------AGACAA-GGGTTTTCATCCTAGTT-ACC---GT
GGCCAGTTAATGAAGGCTAGCACATCGGTAGAGAGACAATGTCTTTAACAAGGCAGTGACGCAAGTTCGCCGCTGCTGCT
CAGCCTAACCAATCAATTAGGTCAGAACAAGAGTCTTCACCTTGGACATGAAGTGGTTA-------------GGTGG---
---------------------ATTGGCCATAAAACTAATTTC---GCAACACAAACATTTA---TTTGATTCTCTGTGTG
CCGTGCAC-----------AGGTAGCAATCGATACAACGCACAAAGTAAATACAAAATAAAACACAACAC-----TATCT
ATTTTAGTA-----GTACAAAAACGGAGGGATCAC-------------TAC-----GAAACTCACC-GATAATTTAAAGC
-----AAGTACA-TACACATACCAACAACTTCTTCCATACG-GAGTA---AGCAACACTAGTTTATTCCCATCTCTGACC
TTTTCTTGTGCACGCAGAATCG----CAGCCATGCAC--GGAGGGA---AGCAAGTCCAAGTTCGGCTCACCATTTCTCC
TGCCATCC------TGCCCTAACCACGGCGATGCGCCTTCCTATATAAGCA----TT--AATGCCGCCGTGCGTATAGGA
GCAGGA-CTAAATTAAATCCGCTTGCGAAGACAACCTA-GGAGAAAGGACACAA----AACAC----ACACACAC-----
-------------------ACACACACGCCATGTCGTCGACGTCGTCCAAGCCGAAGAGAGCAGGCGGCCTCCGGGGCCT
CAGGCCGCAGCCGCTGAGCCTGTCAGCCCGGCCGTCCAAGAAGCCACGCGTTGGCGGCCACGCCGGAC---CA------G
CC------GGGCCCGTGATCGTGTACGAGATCACGCCGAGGGTCGTCCACGCCGACCCACACGAGTTCATGGCCGTCGTG
CAGAGGCTCACGGGCAGGCAGC------------------------------CGTCGTCGACGG----------------
-----AGGCGATGTCCGGATCCGGA---GCTAGGGACGGCATTGCCTCGACGT---------------CTTTGGTTCTCA
CGCTTGGCCAG---CAGCAGCGTGCGCCGTG---TGG---TGGTGACCATCCGGCGCCTCCTGCTTCCCCGGCTGCCGCA
TCAT---CA---CCGCTGCTGTCCCCGAGCAGCTTCTTCTTCTCCCCTACCACTATGCAGGCGATACGAGAGCTCATTAG
CTGAGACGACAAGTGCTTTGTTCGAGGCTTGGAACCAGCTTGTGAATATTGAAGATCGC----CCGGAGTGATGAACTGA
TGATCAGATACGTGCACAGTAGCAC---------TGTAATTGTCTTGTTTGTTCGGCGATTTTTCT--T--CCTCTCCCT
CTGTCGCCACTGTACATTTCTTATTAATTTTGTTGATTACAGTTTAGCGCACACAAATGGATAAGTTGGATTTATTGTTT
CAAATTTCACT---------------------------------------------------------------------
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>chr4D_420
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---------------------ACATCGGTAGGGAGACAACGTCTTTAACAAGGCAATGACGCAAGTTCGACGCTGCTGCT
GAGCCTAACCAATCAATTAGGTAAGAACAAGAGTCTTCACCTTGGACATGAAACAGTTA-------------GGTG----
--------------------GATTGGCCATAAAACTAATTTC---ACAACACAAACATTTA---TTTGATTCCCTGTGTG
CCGTACAT-----------AGGTAGCGATCAATACAACGCACAGAGTAAATACAAAATAAAACACAACAC-----TATCT
ATTTGAGTA-----GTACCAAAATGGAGGGATCGC-------------CAC-----GAAACTCACC-GATAATTTAAAGT
ATACTAAGTACA-TACACATACCAACAACTTCTTCCATACG-GAGGA---AGCAACACTAGTTTATTCCCATCTCTGACC
TTTTCTTGTGCACGCAGAATCG----CAGCCATGCAC--GGAGGGA---AGCAAGTCCAAGTTCGGCTCACCATTTCTCT
TGCCATCC------TGCCCTAACCACGGCGACTCC----CCTATATAACCA----TT--AATGCCTCCGTGCGTATAGGA
GCAGCA-CCAAACTAACTCCGCTTGCAAAGGACACA---------------AAA----CACAC----ACACACACACACA
CACACACACACACACACACACACACACACCATGGCGTCGACGTCGTCCAAGCCGAAAAGAGCAGGCGGCCTCCGGGGCCT
CAGGCCGCAGCCGCTGAGCCTGTCGGCCCGGCCGTCCAAGAAGCCACGCGTCGGCGACCACGTCGGAC---CA------G
CC------GGGCCCGTGATCGTGTACGAGCGCACGCCGAGGGTCGTCCACGCCGACCCACACGAGTTCATGGCCGTCGTG
CAGAGGCTCACGGGCAATTGCAAGCAGCGGTCGT------------------------CGACGG----------------
-----AGGCGACGTCCGGATCCGGA---GCTAGGGACGGCAGGGCCTCGACGT---------------CTTTGGTTCTCA
CGTTTGGCCAG---CAGCAGCGTGCGCCGTG---CGG---TGGTGACCATCCGGCGCCTCCTGCTTCCCCGGCTGCCGCA
TCAT---CA---CCGCTGCTGTCCCCGAGCAGCTTCTTCTTCTCCCCGTCCACCATGCAGGCGATACGAGAGCTCATCAG
CTGAGACGACAAGTGCTTCGTTCGAGGCTTGGAGCCAGCTTGTGAATTTTGAAGATCGG----CCGGGGTGATGAACTGA
TGATCATATACATGCACAGTAGCAC---------TGTAATTGTCTT-GTTTGTTCAGCGATTTTCT--T--CCTCTCCCT
CTGTCGCCACTGTACATTTCTTATTAATTATGTTGATTACAGTTTAGCACACACACATGGATAAGTTGGATTCATTGTTT
CAAATTTCACT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5B_700
--------------------------------------------------------------------------------
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--------------------------------------------CACGCAC-----GAAACACATCAAATAATTTAAAGT
A-----------------ATACCAACAACTTCTTCCATACG-GAGGA---AAGGACGCTAGCTTATCCCCATCTCTGACC
CTTTCTTGTGCACGCAGAATCGTTCGCCGCCATGCAC--------A---AGCAAGTCCAAGTTCGGCTCACCATTTCTTT
TGCCATCC------CGCTC-AACCACGGCGACGCC----CCTATATAAGCAAGCATTTATATGCCGCCGTGAGCAC----
-----AGACAAATTAAATCCGCTTGCAAAGACAACCTCCCAA--------CAGAGACACAAC---------ACACACACA
CACACATAGAG--------------ACGCCATGCCATCGACGTCGTCCAAGCCGAAGAGAGCAGGTGGCCTCCAGGGCCA
CAGGCCGCAGCCGCTGAGCCTGCCGACCCGGCCGTCCAAGAAACCACGCGTCGGCGGCCACGCCGGAT---CAGCTGGGG
CT------GGGCCCGTGATCGTGTACGAGCGCACGCCGAGGGTCGTCCACGCCGACCCGCACGAGTTCATGGCCGTCGTG
CAGAGGCTCACGGGCAAGCAGC------------------------------GGT---CGTCGACGGCAGCGACGTTGCC
ACCAGAGGCGACG------TCCGGG---GCTAGGGACGGCAGGGCCTCGACGTCGACGGCCGCGGACGCTTTGGTTCTCA
CGCTTGGCCAGGAGCAGCGGCGTGCGCCGTG---TCG---TCATGATCATCCCGCACCTTCTGCTTCCCCAGGTACTGCA
TCAT---CGATATCGCCGCTGTCCCCGAGCAGCTTCTTCCTCTCCCCGGCCACCATGCAGGCGATACGAGACCTCATCAG
CTGAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr4A_702
--------------------------------------------------------------------------------
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----------------------------------------------CGCAC-----GAAACACATC-GATAATTTAAAGT
AATATAC------------TACCAACAACTTCCTCCATACG-GAGGA---AAGGACACTAGCATCTCCCCATCTCTGACC
CTTTCTCGTGCACGCAGAATCGTTGGCAGCCATGCAC--------A---AACAGGTCCAAGTTGGGCTCACCATTCCTTT
TGCCATCC------CGCTC-AACCACGGCGACGCC----CCTATATAAGCAAGCATT--TATGCCGCCGTGAGCAC----
-----ACACAAACTAAATCCGCTTGCAAAGACAACCTACCAACAGATAGTCAGAGACACA--------------------
-----------------ACACACATACGCCATGTCGTCGTCGTCGTCCAAGCCGAAGAGAGCAGGTGGCCTCCAGGGCGC
CAGGCCGCAGCCGCTGAGCCT---------GCCGTCCAAGAAACCACGCGTTGGCGGCCACGCCGGAT---CA------G
CTGGGGCAGGGCCCGTGATCGTCTACGAGCGCACGCCGAGGGTCGTCCACGCCGACCCGCACGACTTCATGGCCGTCGTG
CAGAGGCTCACGGGCAAGCAGC------------------------------GGT------------------------C
ACCAGAGGCGGCG------TCCGGT---GCTAGGGACGGCAGGGCCTCGACGTCGACGGCCGCGGACGCTTTGGTGCTCA
CGCTTGGCCAG---CAGCGGCGTGCGCCGTG---TCG---TCATGATCATCCCGCACCTTCTGCTTCCCCGGGTACTGCA
TCGTCGACA---TCGCCGCTGTCCCCGAGCAGCTTCTTCCTCTCCCCGGCCACCGTGCAGGCGATACGAGACCTCATCAG
CTGAGACACTGCTTTAAATTGTTCC-------AGTCAGCTTGTCAAAATTGTAGATCGG----ACCGGGTGATGA-----
---TCATATATACGCACAGTGCATTTGTGTG------ACTTGCCTTAGTTCGTTCATCAATTTTCTGTC--TCTCCCTCT
CCGTCGCCACTGTACAATTCTTATTAACTA--------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr4B_988
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------ACA------
-------------------GCACACACGCCATGTCGTCGACGTCGTCCAAGCCGAAGAGAGCAGGTGGCCTCCAGGGCCC
CAGGCCGCAGCCGCTGAGCCTGTCGACCCGGCCGTCCAAGAAGCCACGCGTTGGCGGCCACGCCGGAG---CA------G
CC------GGGCCTGTGATCGTGTACGAGATCACGCCGAGGGTCGTCCACGCCGACCCACACGAGTTCATGGCCATCGTG
CAGAGGCTCACGGGCAATTGCAAGCAGCGGCCGTTGACGGCAGCGACGACGTGGC------------------------C
ACCAGAGGCGACG------TCCGGA---GCTAGGGACGGCAGGGCATCAACCTCGACGGCCGCGGACGCTTTGGTTCTCA
CGCTTAGCCAA---CAGCAGCGTGCGCCGTG---TGG---TGGTGATCATCCGGCACCTTCT---TCCCCGGCTGCCG--
-CAT---CA---CCGCTGCTGTCACCCAGCAGCTTCTTCTTCTCCCCGACCACCATGCAGGCGATACGGGAGCTCATCAG
CTGATACGGCAAGTGCTTTGTTCGAGTCGA----TCAGCTTGCGAAATTTGAAGATCGG----CCCGGGTGATGA-----
---TCATAT------------GGAC---------AGTACTTGTCTTAGTTTGTTCACCAATTTTCT--C--TCTCCCTCG
CTCTAGCCACTGTACGATTCTTACTAATTATGTTAATTAGAGTTTTGCACACACACATTGATAAGTTGGATTCATTGTTT
CAAATTCCACTTTG---AAATATTTCAAGCATAACTGAAATGTCTGAAACTTCTATAATTT-AGGCTTCGGCGTCTTTGG
--------------------------------------------------------------------------------
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------------------------------
>chr3B_1841
AGGGCATT------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
CTAACCAATCCCTTAAAAAATAGAGGAATAAACCTTAGTGGAGTATATTTAGTCCACTAAGTTTTGACCGGACCAAGCCG
----ATCCCCTATATATAATGGAGTAAACTTAAATTTGGCTCATGCATTTCGTCGAACACTTACTATGCACTTCCGCAGC
AAGTGGCAACCATGGTTACCACGCAGGCGGCGAGCAACAGAACAGACACGCAACTGGGAGGAGCAGCAGCATCCACCGGC
GGCTGCAAGCGGCAGCAGCACGCGCCGACGGCAGAGCAGCAGCGTACAGTAGCAGCACGCACGGACGGCGGAGCAGCAGC
GAGCAGCAGTAGTAGCAGCACGCAGCAG-GGAGGAGCAGCGGCGAGAAACATGCATCGGGGAGGAGT-------------
-------------------AGCAACAACAGGAGCACACACCAACGGCGACGAGCAGCAGT------AGCAACAACATACA
CCGG----------------------------------------------------------TGGCCGTACCAGTAGTAG
TATTGGTAGGCATCGCCGGC--GGCCATGGGAGCTTCATGCGAGTCGCCAGCCGGCCGCGAGGAGGTCTTGGCCTGAAGA
AAAATTATACTCGGCCGCCTTAAGACGGAGTAAATATAGGGAGAAATTTAGAGACAGAGTAAAAATTATACTCCCTTACT
GTAGGTTGGGGATCGGTTAATTAGTTGCCGGTTAGAGAAGTAAAATCACATTTTTTTACTCGTGTGATTTTACTCCTCTA
ACCGGTTATAAGGGACCGGTTGGAAATGCCCTAATTCATGTAACCGATTATACCCACCAGTTGGCTAAGTCAAAGCCGTG
ATGGCGGCACCCGCATCCTCGGCAACCTCATTCTAGGTTTCGGAGTCTCCAGACATGGTGATATTGAGGGAGTAGAGGAC
GTAGCGAAGTTGAGAACAAATATATATGATCACATTTAGATCTAAACTTGTTCCATAGGGTACTGCGGATCAAATTTAGA
TCTAGACATTTGTGCCATCGTAGATGCATGTTCTACTTATTTGTATAATTGTATAATTAGTCGTTGTTTCCCGAGCTGTG
AATCAACTTTAAATCTGAAAATATATGTCATGGTAGACGCGTATACGATATATGTGCTGAATTTTTTCCAGAGCTGTTTA
CAAGTTCAGAGATTCGTTGTCCTTGGTATTGATATGATTTAGACTTCTTGTGGCAGAACTTACTGATATGATTTTTACGG
TCTACTAAGCATGTGAGTTTTCATTTCGTATTGTCCCAATGGATGTTATATTGTATAAGATAACAATAAGAAATGTGAAT
CACAAAAGTAATAGACGACTAGCATGTTGCACGTGCATTTGTGCTGGCAACCATGCCAGTTTACTTTAAAAGTACTTCGA
CATTATTTTTTTTCTCTTTTATTTCATATTTATGCAATGATAATAGTAGTGGTCAAACATGTGCATTGACGATTGTCAAC
GTTCTAAACAATAATACTTGTAGCTATACAAGGAAGAACTGGCCATTATTTATTGGCACCATTTCCCTGGTAGCACCTTC
TTCCCAAGAAAACCGTTATACTGATAACACAAAGTATTTAGCTTAGCTCGATTTTACATGCGTGATTTTGGAATCAACAA
TAGTTTCTCCTTCCTGCGAACGGTTAGCCCAAACACCTCTGTCATATAGATATTTTTTCTCTCAACCCCAACCGGAAGTT
CCCAATCAAAATGGTTCACGAGGTTTGCTAACATAAATTCGACATTTGCGATTCCGAGGTTTATACCAGGGCATATCCTT
CGTCCGGGCCCGAACGGCAAGAACTGGAAATCATTCCCCTTGAAATTGACATTCGTAGCGGTGCCTTTATCTGTAAATCT
TTCAGGTATGAACTCTTCCGCACCCTCCCAAGAGCTCGAATCCCTCCCAACGGCCCATGCATTTATGACGACACGAGTTC
CAGCAGGAACCATGTATCCATGGATGGTACAATCAGCCATGGCAAGGTGCGGAGCAAGGAGAGGCGCAACAGGATACAAC
CTGAGAGGCTTTTTTATTACTGCTCTTAGGTACACCATGTTGTTCATGTCAGATTGGCTCACAATTTCTTGTCCCCCGGG
TATGATACTCCTCACTTCGTCTTGTAGCTTCCCCATGAAGTGTGGCTTCCTCATGAGCTCAGCCAAAGTGAATTCGAGGA
CGTTAGCTGANNNNNNNNNNTTTTTTTTTTACAGACGAGCGTGTAGCTAAACATACAGACAATACCTGAAAACCATCAAT
TTTGATATGCATATGAAACATGAGAGGTCACCAAAATAACATGATTGGATAAGATCAAACTTTATGTTCTAGAGAATTTT
TCAACATTGTTGATCTTACTCGTCTATAAAAAAACTTGTCCATACATGCCGTTGCTTCACTCCTGCAATCTAATGTAATG
TGTTACACAAAATTCAGAAAGAGGATAAGTATGGCAGATCTGAAAATGGTATGGTCGACTGAAGAATTTCCTAATAAAGT
GAAGTGTCTAATTGCAGTTAAAGTCCACCTGGACTGTTAGTATGCTGCTAGCACATGTACACGGATTCAATTGCTCAAAT
ATTTTGTCATCATGTTGAGCTGTACGCCTGTACCATGTTTCTACCCACACGGCTGTACCATGCAACGATAGGGACGACAA
TTTTGGAGCAGAGGTGGGGCGCTAATGGTTCAGAGCGGCCGGAAGTAGGCACTTGCTGACGATCTGGATCGTCCATAAGC
TCATGTACAGGAGACGAGAGGTCAACGAAAGAGAAGAAGTTTTGGGGAAGAACTGTTGGTGCAAATGGACTATTTTCTAA
GGATCAATGTATAAAATTTACCAGCAGCCCATTGGTTTACAGAATCTGGTCCCTCTATTGTGCATCCGGCGGCTCAGATT
GGACTGGTGCACTCGTTGCATGAGACAGCTCGTTGCACAGGATACGTCCTCCACCCATATATACATCATCGGTTGTTTCT
CTAAGATTTGTGTCATGTTTCTATATTATTTTTTATTAAAAATGATCTTCTTTTCAATTATTGCATAATGGGACGGATAG
AGAGAATAAACAGGAGTCTAGAGAGGCGACTTCTGATGGCCATCCCGACGAGCGTACCTGGGTGCATGTATCGATTGATG
CAGAGGCCGGGGGCTTTCTTCCTTTTCAAAAAAATAATCCTGATGAGCGTACCTCCTTCTGCTCATACGACCGCCGGGGC
TCATTGCAGCCTTCCCTCTCCCTCACCCCTCCACTATATCTTAGCCCGATGATGCCCTCATACTGTCAATGGTGTCCAAG
ATCTTGCGTGCAGACACAGAGAGGCGGTGGTGGTTGTTGGATAAATTAGCAATTTTCTGACTGATTTAAGGGCATTTCTA
ACCAATCCCTTAAAAAATAGAGGAATAAACCTTAGTGGAGTATATTTAGTCCACTAAGTTTTGACCGGACCAAGCCGATC
CCCTATATATAATGGAGTAAACTTAAATTTGGCTCATGCATTTCGTCGAACACTTACTATGCACTTCCGCAGCAAGTGGC
AACCATGGTTACCACGCAGGCGGCGAGCAACAGAACAGACACGCAACTGGGAGGAGCAGCAGCATCCACCGGCGGCTGCA
AGCGGCAGCAGCACGCGCCGACGGCAGAGCAGCAGCGTACAGTAGCAGCACGCACGGACGGCGGAGCAGCAGCGAGCAGC
AGTAGTAGCAGCACGCAGCAGGGAGGAGCAGCGGCGAGAAACATGCATCGGGGAGGAGTAGCAACAACAGGAGCACACAC
CAACGGCGACGAGCAGCAGTAGCAACAACA
>SNPs
--S-SS--SS-SS-SSS-S-----SSSSSSS-SS-SS-SS-S--------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------S---
-----------------S---------------------------S--------------------S-------------
S-----------S-S-SSS-SSSSSSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S---S---
-SSSSSSS-SSSSSSSSSSSSSSS----S---S---S-S-SS----SS-------SS-S----SS---S----S------
---S--S-SS-SSSS-S-----------------SS---------SS----------------------------SSS--
------------------S---------------------------------------S--S-----S---S--------
-----S------------S--S--SS-SSS--S-----------------------------------------------
-----------------------S--S-------------S-----------------------------------S---
------S-------------------------------------------------------------------------
-----S-----S-------S-S-SSSSSSSSS-SSSSSSSSSSS------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
-------SSSSSSS------S-----------------------------S-----------------------------
-----------S-------S----S---------SS---------------------------SSSS---S---------
--------------------------------------S-----------------------------------------
----------------------------------------------------------------------S---------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------S------S----
----------S--------------SSS------------------S---------------------------------
---------------------S---------SSS----------------------------------------------
--------------------------------------------------------------------------------
-----S-----------------SSSSS-SS---------------------S------SSSS-----------S-----
S----S-----S------------SS---SSSSS-------------------------------S---SS-----S---
----------SS-----------S-S------------------------S-----------------S-----------
------------SS-S----S-S-------S-----------S--------------S--SS--S---S--S--------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
------S-S------S-----------S----------------------SS--------S-----S-------S----S
SSSS----------------------------------S-----S-----------------SS-------S---SSS--
S-------S-------S-------S------SS-----S-S-SSS------------------S--------S-------
---SS-S---S------SSSSSSSS-S--SSSSSS-S------------------------------------S------
-SSS--------S-----------S---S--S----------SSS-S-SS-SSSSSSSSSSSS-SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS----S--S-S-S-S-------------S-S-S--------SSSSSSS-------S--S---
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-------
--SS--S---SS-S------SS----------------S-S-------------S---------------S--S------
S-----------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>forward_4673
--------------------------------------------------------------------------------
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-------------AATCACGGACATGAAGCGGT-----------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>reverse_6223
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------CTGTTCGTTAGGGCGTGT
CT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
