>input_sequence_79739
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------------------------------------------------------------------ATGCCCCGCACCGA
TCCTGGCCTCCCCTGCATCG------------------------CGCCGCTGCC------------------------CC
TTGCCCAAGGATCCCCGC-CGCCCGTCCCTGGACC----TGCCTTGTCTCGATGGCTCCGGCCATCCGCATTGAATCTCT
GGCACTCCAGCGGTCCAGCCAAACCTCACC-------------GCCACCTACCTCCAGCGACGCGTCGGATTGAGACCTC
CTGCACGCCTTGCGGTGGCGCTGCCTCTGCCA---CAC---CCATCGCGAACGAACACCATGGCCTCGAGGTCCAGCGT-
--CTCATCGAAGGCACCCGCTGGCGAGAGGTCGGCTCCCCTGCATCATGCCGCCGCCCCTTGCCCAAGGATCAGTGCGCC
AGTCGGCAGAGCTGGGCAGTGTTTGGGGTGGGAGAGGGAGGTGTTAGTGGGGG-CGCCAACGGCAGGTCATGCGACGACG
GCGGCGCGGGTGCAGCGACAGTAGGATGGGGAAAGTGA------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr3A_1_TraesCS3A01G206800
AGGAGAATCCTTATGTATCTCCTAAGGCAAGCTTCCTCATTAGTGGTCCACCCTTTAATGGCCTTCCTAAATCTTCCAAC
CTTTATCTGCCAATTCTCCAAAGGAGAGATAGCACCAGTTGGCTCTAACCAGATTTTCCTGACTAGGTTAGAGAAGTCCT
CCCTCAAAAGCCTTGTGCCTAAGGATGGCAATGGGTAGGGTATGAGGCAGGTAGAGCATTACCATACACATACCAGTGTA
GTAAATGGGTACAAAATTATACCCATACTCATATCCACGGGTATGAAACTTTATCGGTACCCATACCCGGTGGGTACCCA
TACCCAATGGGT-----------AGATCAAATAGTACACAATTAATTCATAATTTTACATTCATCTATAGCACATTTGAC
T-AAAAACCATTGATATCAACTCAATAATAGATAAATGAGCACATGACAATTATCTCAAATCCAATTAAGAATTGGTAAA
AACTTTAGGGATAATTGATATTATGCCCCTAGTTGGGTCACACTCGACAGGTTTACCCCTACTTTTCAAAAATACTCGCT
CCTGCCCAAATCACTTTGCTTCTCTTGTGTTTTTGCCCTTCTGTCTCAATTCCGTCTGGTCAAAGGCGTTTGACTGTTAG
AAAGAAATTTTTCTGGACCATTTTGCCCCTCCTTACAACTCCAGTTAAAA---ATCAAAG--AAAAAA-CAATGTTACAC
TTGCATGTGGGACTCAATTAAA-TGCAAAAGAA-AAAAA-GCCTTCC--CTCTCTCTTCCATGTGGGACCCATG-CCCCA
TCCACCTTCCTATCTTCTTCCTCCCCCGGCTCCGGCGTGGCTTCCCCGCTCACCCCGCTGCCGGTCACCCGCGCCAGTGC
CTCCCTGACCTCGAGCCCAGGGACGAGCAGCTGCTACCCACTTGCCCGCCGTCGGTCGCCAGTGCCTCCCCAACCTCCAT
CCCGGCCAGATCCGGTCCAGCCCGAGCCTCCCGCGACCGGATCTGCTGTCTCCGCCACGCCC-CC-ATGCCCCGCACCGA
TCCTGGCCTCCCCTGCATCG------------------------CGCCGCTGCC------------------------CC
TTGCCCAAGGATCCCCGC-CGCCCGTCCCTGGACC----TGCCTTGTCTCGATGGCTCCGGCCATCCGCATTGAATCTCT
GGCACTCCAGCGGTCCAGCCAAACCTCACC-------------GCCACCTACCTCCAGCGACGCGTCGGATTGAGACCTC
CTGCACGCCTTGCGGTGGCGCTGCCTCTGCCA---CAC---CCATCGCGAACGAACACCATGGCCTCGAGGTCCAGCGT-
--CTCATCGAAGGCACCCGCTGGCGAGAGGTCGGCTCCCCTGCATCATGCCGCCGCCCCTTGCCCAAGGATCAGTGCGCC
AGTCGGCAGAGCTGGGCAGTGTTTGGGGTGGGAGAGGGAGGTGTTAGTGGGGG-CGCCAACGGCAGGTCATGCGACGACG
GCGGCGCGGGTGCAGCGACAGTAGGATGGGGAAAGTGAGGTGTTTCGGGAGGAAGA--GAGAGAGTGTATGTTTTTCT--
CT-----TTT--TT----------TTCTTTTGCATTTAGTTGGGTCCTACTTGTAAGAGTCACATTG-TT--TTTTTCTT
TGATTCTTAACTGAAGTTGGAAGGAGAGGCAAAATGGTCTAGAAAAGTGTCGCTCTGACGGTCAAATGCCTTTGACTGGA
CGGAATTGAGACGAAAGGGCAAAAACACAAGAGAAGCAAAGTGGTTTGGACAGGAACGAGTATTTTCAAAAAGTAGGGGT
AAACCTGTCGAGTGTGACCCAACTAAGAGCATAATATCAGTTATCCCAAAACTTTAACATATGTTCACAAACTCACGACA
TAAAATTAACATAGGTACAAATGTGAATCACGGATAAGGTTCACATGTTAGTATAAACGGATAGGGTATGTGTATATCCA
TGGGTAAAAGACTATATTCGTGACATATCCATAACTTAACGA--AGGGTATGAATACTACCCATGGATATAAAATTGTGT
TCATACTCTATCCATGTGAATACGGTATCCGCAGGTACCCATACCTATGTGTAGAATTGCCATTCTTACTTGTGCGTCGC
CATCTTGTGGCAATGTCGCCATCGTTAGAAACAAACTCGCTGGAAATCAGGATTTGACAAATGGATGGGGAGAAGAAACC
TGGTTCCTTTGCGATCCGTGCTGGCACGTGCCTTCCGATGGAGTGGGTCTACTCACCGGAGGCATACAACCGGATCGTAT
AGGATTTTTTTCCAGGGACCGGTGTCAAAATGATTTTCTACCGGGATGATTTTTTTCTTTCAGACTGGGAGTTCATGGGT
TTGGGTAACGGGCGTTCTTCCCTCCGCCAGTATTGGCCAGGTTCATCATTCATGAAGGACTGGTCACCATTAACGTGTGG
TACGACCGTAATGGAAAGGGTTGATCGAACGCGAGTTGCGCCATTTCTCTTTGTTTTTCTTTTCTGAATCTGAAAAGGAA
AAAAGAATGACCGATTTGTCTTCG
>chr5D_180
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TAAGGATGGCAATGGGTAGGGTATGAGGCGGGTAGAGCAATACCATACCCATACCCGTGTA
GTCAATGGGTACAAAATTCTACCCATACCCATACCCATGGTAATGGAACTTTTCCCGTACCCATGCCTAGTGGTTACCCA
TACCCATTGGGTACCCAACAGGTAGATCAAACAGAACACAAGTTATTCGCAATGTTACATTCATCTATAGCAGATTTGAC
CCAAATAACATTGATCTCAACTCAATAACATATAGAAGAGTACATGACAATTATCTCAATTCAAATTGAAAATTGGTGAC
AAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TTTAACATAGGCTCACAAGCTCTCGACA
CAACTTTAACATAGATACACTTGTGAATCACGGATAAGGTTCACATGTTAGTATAATTGGGTAGGGTATGGGTGTATCCA
TGGGTAAAAGACTATACCCATGCCCTATCCATGACTTAACGGGTAGGGCATGGGTACTACCTGTGGGTATAAAATTGTGC
CCATACCCTGCCCATGCTGGTACGGTATCCGCGGGTACCCGTACCCATAGATAAAATTGCTATCCTTA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5D_465
TAAAAATCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGGGATAATTGATATTATGCCCCTAGTTGGGTCACACTTGACAGGTTTACCCCTACTTTTCAAATATACTCGTT
CCTGCCCAAACCACTTTGCTTCTCTTGTGTATTTGCCCTTCCGTCTCAATTCCGTCTGGTCAAAGGTGTTTGACTGTTAG
AGAGACATTTTT-TGGACAATTTTACCCCTCCTTACGACTCCAGTTAAAA---AACAAAT--AAAAAA-CAATGTTACAC
TTACACGTGGGACCCGATTAAA-TGCAAGAGAA-AAAAA-GCATTCC--CTCTCTCTTCCCTGTGGGACCCACGCCCCCA
TCCCCCTTCCTATCTTCTTCCTCCCCTTGCTCCAGCATGGCTCCCCCGCTCACCCCGCAGCCGGTCACCCACGCCGGTGC
CTCTCCGACCTCGAGCCGCGGGACAAGTAGCTGTTGCCCATCTGCCCGCCACCGGTCGCTAGTGCCTCCCCAACCTCCAT
CCCGGCCAGATCCGTTCCAGCCCAAACCTCCCGCGACCGGATCTGCCGTCTGTGCCGCGCCC-CC-ATGCCCCGCGCCGA
TCCTGGCCTCCCCTACATCG------------------------CGCCGCCGCCCCTTGCCCAAGGATCGCCGTCGCTCC
TTGCCCAAGGATCCCCGC-CGCCCGTCCCTGGACCCACCT----CGTCCCGGTGGCTCTGGCCATCCGCGTCGAATCTCG
GGCAC--------TCCAGCCAAACGTCGCC-------------GCCAACTACCTCCAGCGACGCGTCAGATCGGGACCTC
CTGCATGCCTTGTGGTGGCGCTGCCTCT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr5D_471
CTTTATT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GGGATAATTGATATTATGCCCCTAGTTGGGTCACACTCGACAGGTTTACCCCTACTTTTCAAATATACTCGTT
CCTGCCCAAACCACTTTGCTTCTCTTGTGTTTTTGCCCTTCCATCTCAATTTCGTCTGGTCAAAGGCGTTTGACTGTTAG
AGAGACATTTTTCTGGACAATTTTACCCCTTCTTACGACTCTAGTTAAAA---A---AAT--AAAAAA-CAATGTTACAC
TTACATGCGGGACCCGATTAAA-TGCAAGAGAA-AAAAAAGCATTCC--CTCTCTCTTCCCTGTGGGACCCACGCCCCCA
TCCCCCTTCCTATCTTCTTCCTCCTCTAGCTCCAGCATGGCCCCCCCGCTCACCCCGCAGCCGGTCACCCACGCCGGTGC
CTCTCGGACCTCGAGCCGCGGGACAAGCAGCTGCTGCCCATCTTCCCGCCGCCGGTCGCCAGTGCCTCCTCAACCTCCAT
CACGGCCAGATCCGTTCCAGCCCAAGCCTCCCGCGGCCGGATCTGCCGTCTCCGCCGCG-CC-CCCATGCCCTGCGCCGA
TCCTGGCCTCCCCTACATCG------------------------CGCCGCCGCCCCTTGCCCAAGGATCGCCGTCGCTCC
TTGCCCAAGGATCCCCGC-CGCCCGTCCCTGGACCCACCT----CGTCCCAGTGGCTCTGGCCATCCGCGTCGAATCTCG
GGCAC--------TCCAGCCAAACCTCGCC-------------GCCAACTACCTCCAGTGACGCGTCAGATCGGGACCTC
CTGCACGCCTTGCGAAAGCGCTGCCTCTGCCA---CATCATCCATCACAGACGAACACCGTGGCCTCGAGGTCCAGCGTG
TGCTCATCGGAGGCGCCCATTGGCGAGAGGTCGGCTGCCCCCGCCATTCAGTCC---------------CTCAGCACGGC
GGTCGGCAGAGCTGGGCGGTGTCTGGGGTGGGAGAGGGAGGTGGTAGTGGGGGTCGCCGACGGTAGGTCATGCGACGCCG
GTGGTACGGGTGCGGCGACAGCAGGATGGGGAAAGTGAGGTGTTTCGGGAGGGGGA--GAGAGAGTGTATGTTTTTCT--
AT-----TTT--TT----------TTCTTTTGCATTTAGTTGGGTCCCACATGTAAGCGTCACATTA-CT--TTTTTCTT
TGATTCTTAACTGAACTTGGAAGGAGGGGCAAAATGGTCCAGAAAAATGTCGCTCTGACGGTCAAACGACTTTGACCAGA
CGGAATTGAGACGGAAGGGCAAAAACACAAGAGAAGCAAAGTGGTTTGGGCAGGAACGAGTATATTCGAAAAGTAGGGGT
AAACCTGTCGAGTGTGACCCAACTAGGGGCATAATATCAATTATCCC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr7A_471
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CTTTTGGGACAATTAATATTATGCCCGTAGTTGTGTCACACTGGACATGTTTACTCATACTTTCCAAAAATACTCGTT
CCTCCCCAGACCACTTTGCTTCTCTTGTATTTTTGCCCTTCCGTCTCAATTCCGCCAGGTCAAAGGTGCTTGACTATTAG
AGAGACATT-TTCTGGACCATTTTGCCCCTCCTTACAACTCTAGTTAAAAATCA---AAG--AAAAAA-CAATGTTACAC
TTACATGTGGGACCCAATTTAAATGCAAAAG---AAAAA-TCCTTCC--CTCTCTCTTCCCTGTGGGACCCACACCCCCA
TCCACCTTCCTATCTTCTTCCTCCCGCAGCTCCGGCATGGCTTGCTCGCTCACCCTGCTGCCGATCACCCGCACCAGTAC
CTCCTCGACCTTGAGCCCTGGGACAAGAAGTTGTTGCCCACCTGCCCGCCGTCGGTCGCCAATGCCTCCCCAACCTCCAT
CCCGGCCAGATCCGGTCCAGTCCGAGCCTCTTGCGGCTGGATCTTCCGTCTCTGC--CGCGC-CC-ACGCCCCGGGCCGA
TCCTGGCCTCCACTACATCA------------------------CGTTGCC-CC------------------------CC
TTGCCCAAAGATCCTCGC-CACCCATCCCTGGACC----T----TGTCACGGTGGCTCTAGCCATCCGCGTCGAATCTCG
GGCAC--------TCCAGCCAAACCTCGCC-------------GCCACCTACCTCCAGCGACGCATCGAATCGAGATCTC
CTGCATGCCTTGCGATGGCGCTGCCTCTGCCA---CACAT---ATCACGGACGAACACCGTGGCCTCGAGGTCCAACCTG
TGCTC-----AGGCGCCCGCTGGCGAGAGGTCGGTTGCCCCCGCCATGCAGTCC---------------ATCAGCGGGCC
GGTTGACAGAGTTGGGCGGTGCCTGGGGTGGGAGAGGGATGTGGTAGTGGGGG-CGCCGATGGCAGGTCATGCGACACCG
GCAGCGCGAGTGCGGCGATACCAGGATGGGGAAAGTGAGGTGTTTCAGGAGGGGAGGGGAGATAGTGTATGTTTTTCT--
AT-----TTT--TTCT--------TTCTTTTGCATTTAGTCGGGTCCCACATGTAAGCATCACATTGTTT--TTTTTCTT
TGATTCTGAACTGAAGTTGGAAGGAGGGGCAAAATGGTCCAGAAAAACATTGCTCTGATGGTCAAATGCCTTTGACTGGA
CAGAGCTGAGATGGAAGGGAAAAAACACAAGAGAAGCAAGGTGATTTGGACAGGAATGAGTATTTTCAAAAAGTAGGGGT
AAACCTGTCGAGTGTGACCCAACTAGGGGCATACTATCAATTATCCCA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5D_473
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TTAGGGATAATTGATATTATGCCCCTAGTTGGGTCACACTCGACAGGTTTACCCCTACTTTTCAAATATACTCGTT
CCTGCCCAAACCACTTTGCTTCTCTTGTGTTTTTGCCCTTCCGTATCAATTCCATCTGGTCAAAGGCGTTTGACTGTTAG
AGAGACATTTTTCTGGACAATTTTACCCCTCCTTACGACTCCAGTTAAAAAACA---AAT--AAAAAA-CAATGTTACAC
TTACATGTGGGACCCGATTAAA-TGCAAGAGAA-AAAAA-GCATTCC--CTCTCTCTTCCCTGTGGGACCCATGCCCCCA
TCCCCCTTCCTATCTTCTTCCTCCTCTAGCTCCAGCATGGCTCCCCTGCTCACCCCGCAGCCGGTCACCCACGCCGGTGG
CTCTCCGACCTCGAGCCGCGGGACAAGCAGCTGCGGCCCATCTGCCCGCCGCCGGTTGCCAGTGCCTCCCCAACCTCCAT
CCCGGCCAGATCCGTTCCAGCCCAAGCCTCCCGCGGCCGGATCTGCCGTCTCCGCTACGCCC-CC-ATGCCCCGCGCCGA
TCCTGGCCTCCCCTACATCG------------------------CGCCGCCGCCCCTTGCCCAATGATCGTCGTCGCTCC
TTGCCCAAGGATCCCCGC-CGCCCGTCCCTGGACCCACCT----CGTCCCGGTGGCTCTGGCCATCCGTGTCGAATCTCG
GGCAC--------TCCAGCCAAACCTTGCC-------------GCCAACTACCTCCAGCGACGCGTCAGATCGGGACCTC
CTGCACGCCTTGCGGTGGCGCTGCCTCTGCCA---CATCATCCATCACGAACGAACACCATGGCCTCGAGGTCCAGCGTG
TGCTCATCGGAGGCGCCCGCTGGCGAGAGGTCGGCTGCCCCCGCCATTCAGTCC---------------CTCAGCGCGGC
GTTCGGCAGAGCTGGGCGGTGTCTGGGGTGGGAGAGGGAGGTGGTAGTGGGGGTCGCCGACGGTAGGTCATGCAACGCCA
GCGGCACGGGTGTGGCGACAGCAGGATGGGGAAAGTGAGGTGTTTCTGGAGGGAGA--GAGAGTGTATGTTTTTCTAT--
-T----------TTTT--------TTCTTTTGCATTTAGATGGGTCCCACATGTAAGCGTCACATTG-CT--TTTTTCTT
TGATTCTTAACTAAACTTGGAAGGAGGGGCAAAATGGTCCAGAAAAATGTCGCTCTGACGGTCAAACGACTTTGACCACA
CGGAATCGAGACGGAAGGGCAAAAACACAAGAGAAGCAAAGTGGTTTGGGCAGGAACGAGTATATTCAAAAAGTAGGGGT
GAACCTGTCGAGTGTGACCCAACTAGGGGCATAATATCAATTATCCC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr4D_475
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGGGATAATTGATATTATGCCCTTAGTTGGGTCACACTCGACAGGTTTACCCCTACTTTTTGAATATACTCGTT
CCTGCCCAAACCACTTTGCTTCTCTTGTGTTTTTGCCCTTTCGTCTCAATTCCGTCTGGTCAAAGGCGTTTAACTGTTAG
AGAGACATTTTTCTGGACAATTTTGCCCCTCCTTACAACTCCAGTTAAAAATCA---AAGAAAAAAAA-CAATGTTACAC
TTACATGTGGGACCCAATTAAA-TGCAAGAGAC-AAAAA-GCATTCC--CTTTCTCTTCCCTCTGGGACCCACGCCCCCA
TCCCCCTTCCTGTCTTCTTCCTCCCCTAGCTCCGGCATGGCTCCCCGGCTCACCCCGTAGCCGGTCACCCACGCCGGTGC
CTGCCTGACCTCGAGCCGCGGGACAAGCAGCTGCTGCCCATATGCCCGCCGCCGGTCGCCAGTGCCTCCCCAACCTCCAT
CCCGGCCAGATCCAGTCTAGCTCGAGCCTCCCGCGGCCGAATCTGCCGTCTCCACCGCG-CC-CC-ATGCCCCGTGCCAA
TCCTGGCCTCCCCTGCATCA------------------------CGCAGCCGCT------------------------CC
TTGCCCAAGGATCACCGCGCGCCCGTCCCTGGACCCACCT----TGTCCCGGCGGCTCTGGCCATCCGCGTCGAATCTCG
GGCAG--------TCCAGCCAAACCTCACC-------------GCCAACTACCTCCAGCGACGCGTCGGATCGAGACCTC
ATGCACGCCTTGCGGTGGTGCTGCCTCTGCCA---CATC---CATCACGGACGAACACAGTGGCCTCGAGGTCCAGCGTG
TGCTCATCGGAGGCGCCCGCTGGCGAGAGGTCGGCCTCCCCCACCATGCAGTCC---------------CTCAGCGCGCC
GGTCGGCAGAGCTGGGTGGTGTCTGGGGTGGGAGAGGGAAGTGGTAGTGGGGGGTGCCGACGGTAGGTCATGTGACGCCG
GCGGCATGGGTGCGGCGACATCAGGATTGGGAAAGTGAGGTGTTTCGGGAGGGAGA--GAGAGACTGTATG---------
-TTTTTCTTT--TTTT--------TTCATTTGCATTTAGTTGGGTCCCACATGTAAGCGTCACATTG--T--TTTTTCTT
TGATTCTTAACTGAAGTTGGAAGGAGGGCCAAAATGGTCCAGAAAAATGTCGCTCTGACGGTCAAATGCTTTTGACTAGA
CGGAATTGAGACGGAAGGGCAAAAACACAAGAGAAGCAAAGTGGTTTGGACAGGAACGAGTATATTCGAAAAGTAGGGGT
AAACCT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr3B_475
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGGGATAATTGATATTATGCCCCTAATTGTGTCACACTCGACATGTTTACCGCTACTTTTCGGATATACTCGTT
CCTGTCCCAACCACTTTGCTTCTCTTGTGTTTTTGCCCTTCTGTCTCAACTCCGTCTGGTCAAAGGCGTTTGACTGTTAG
AGCGACTTTTTT-TGGATAATTTTGCCCCTCCTTACAACTCCAGTTAAAAATCA---AAGAAAAAAAAACAATGTTACAC
TTACATGTGGGACCCAATTGAA-TGCAAGAGAAAAAAAC-GCATTCC--CTCTCTCCTTCCTGTGGGACCCACGCCCTAA
TCCCCCTTCCTATCTTCTTCCTCGCCTAGCTCCGGCATGACTCCCCCGCTCACCCCGCAGCCGGTCACCCACGCCGGTGC
CTCCCTGACCTCAAGCCGCGGGACAAGTAGTTGCTGCCTATCTGCTCGCCGCCGATCGCCAGTGCCTCCTCAACCTCCAT
CCCGGCCAGATCCGGTCCAGCCCGAGCCTCCCGCGGCCGGATCTGCCGTCTCCGCTGCG-CCTCC-ATGCCTTGCGCCAA
TCCTAGCCTCCCCTGCATCG------------------------CGCCGCCACC------------------------CC
ATGCCCAAAGATCCCCGC-CACCCGTCCGTAGACCCACAT----TGTCCTGGTGGCTCTGGCCATCCACATCGAATCTCG
----------------------------CCGCCAGACCCCGCTGCCAACTACCTCCAGCGACGCGTCGGATCGAGGCCTC
CTACACGCCTTGCAGTGGCCCTGCCTCTGCCA---CATC---CATCACGGACGAACACCGTGGCCTCGAGGTCTAGCTTG
TGCTCA-CGAAGGCGCCCGCTAGCGAGAGGTCGGCTGCCCTCGCCATACAGTCC---------------CTCAGCGCGCC
GGTCGACAGAGCTTTGCGGTGTCTGGGGTGGGAGAGCGAGGTGGTTGTGAGGGGCACCGACGGCAGGTCATGCGACACCG
GCGGCACGGGTGCGGCAACACCACGATGGAGAAAGTGAGGTGTTTCGGGAGGGAGA--GAGAGTGTGTATGTTTTTCG--
AT----------TTTT--------TTATTTTGCATTTAGTTGGGTCCCACATGTAAGCGTTGCATTG----ATTTTTCTT
TGATTCTTAACTGAAGTTGGAAGGAGGGGCAAAATGGTCCAGAAAAATGTCGCTCTGACGGTCAAACTCCTTTGACTGGA
CGGAATTTAGACGGAAGGGTAAAAACACAAGAGAAGCAAAGTGGTTTGGACAGGAACGAGTATTTTTGAAAAGTAGGGGT
AAACCTGTCGAGTGTGACCCAACTAGGGGCATAATATCAATTATCCC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr3B_475
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGGGATAATTGATATTATGCCCCTAGTTGTGTCACACTCGATAGGTTTACCCCTACTTTTCGAATATACTTGTT
CTTGTCCAAACCACTTTGCTTCTCTTGTGTTTTTGCCCTTCCATCTCAATTCCGTCTGGTCAAATGCGTTTGACTATTAG
AGCGACATTT-TCTGGACAATTTTTCCCCTCCTTACAACTCCAGCTAAAAATCA---AAGAAAAAAAAACAATGTTACAC
TTACATGCGGGACCCAATTGAA-TGCAAGAGAA-AAAAA-GCATTCC--CTCTCTCCTTCATTTGGGACCCATGCCCTAA
TCCCCCTTCCTATCTTCTTCCTCCCCTAGCTCCGACATGACTCCCCTGCTCATCCCGCAGCCGGTCACCCACGCCGGTGC
CTCCCCGAACTCAAGCCGTGGGACAAGCAGCTCCTGCCTATCTGCCCGCCGCCGGTCGCCAGTGCCTCCCCAACCTCCAT
CTCGGCCAGATCCGCTCCTGCGCGAGCCTCCCGTGGCCGGATCTGCCGTCTCCGCCGCGCCC-CC-ATGCCCCGCGCTGA
TCCTAGCCTCCCCTGCATCG------------------------CGCCGCCGCC------------------------CC
TTGCCCAAGGATCCCCGT-CGCCCGTCCCTGGACCCACCT----TGTCCCGGTGGCTCGGGCCATCCACGTCGAATCTCG
----------------------------CC-------------GCCAACTACCTCCAGGGACGCGGCGGATCGAGGCCTC
CTGCATGCCTTGCAGTGGCGGTGCCTCTGCCA---CATC---CATCACGGACGAACACCGTGGTCTTGAGGTCCAGCGTG
TGCTCA-CGGAGGCGCCCGCTGGCGAGAGGCCGGCTGCCCCCGCCATACAGTCC---------------CTCAGCACGCC
GGTTGGCAGAGCTGGGCGGTGTCTGGGATGGGAGAGCGAGGTGGTAATGAGGGGCGCCGATGGCAGGTCATGCGACGCCG
GAAGCACGGGTGCGGCGACACCACGATGGGGAAAGTGAGGTGTTTCAGGAGGGAGA--GAGAGTGTGTGTATGTTTTCCA
AT----------TTTT--------TTATTTTGCATTTAGTTGGATCCCACATGTAAGCGTCACATTG----ATTTTTCTT
TGATTCTTAACTGAAGTTGGAAGGAGGGGCAAAATGGTCCAGAAAAATGTTGTTCTGACGGTGAAACTCCTTTGACTGGA
CGGAATTGAGACGGAAGGGAAAAAACATAAGAGAAGCAAAGTGGTTTGGACAGGAATGAGTATTTTTGAAAAGTAGCGGT
AAACCTGTCGAGTGTGACC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr2D_475
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------AGGGATAATTGATATTATGCCCCTAGTTGGGTCACACTCGACATGTTTACCTCTACTTTTCGAAAATACTCATT
CCTGCCCAAACCACTTTGCCTCTCTTGTGTTTTTGCCCTTCCTTCTCAATTCCGTCTGGTCAAAGGCGTTTGACTGTTAG
AGAGACATTTTTCTGGACCATCTTGCCCCTCCTTACAACTCCAGTTAAAAATCA---GAGAAAAA---ACAATGTTACAC
TTACATGTGAGACCCAATTCAA-TGCAAAAGAA-AAAAAA--CTTCC--CTCTCTCTTCCCTATGGGACCCACGCCCCCA
TCCCCCTTCCTATCTTCTTCCTCCCTTAGCTCTCGCATGGCTCCCCCGCTCACCCCGCTGCCGGTCACCCACGCCAGTGC
CTCCCCGACCTCGAGCCGCTGGACGAGTAGCTGCTGCCCATCTGCCCGCCGCCGGTCGCCAGTGCCTCCCCAACCTCCAT
CCCGGCCAGATCCGGTGCAGACCGAGCCTCCTGCAGTCGGATCTGCCGTCTCTGCCGCGCCC-CC-ATGCCCCGCCCTAA
ACCTGGCCTCCCCTCCATCA------------------------CGTCGCCGCC------------------------CC
TTGCCCAAGGATC-CCGC-CGCCCGTCCCTAGACCCACCT----TGTTCCGGTGGCTCTGGCCGCCC-------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GTCCCACATG
TGCTCATCGGAGGTGCCCGCTGGCGAGAGGTCGGCTGCCCCCGCCATGCAGTCC---------------ATCAGCGGGCC
GGTCGGCAGAACTGGGCGGTGTCTGGGGTGGGAGAGGGACGTGGTAGTGGGGGGCGTCGACGGCAGGTCATGCGACGCCG
GCGACACGGGTGTGGCGAAACCAGGA-TGGGAAAGTGAGGTGTTTCGGGAGGGAGA--GAGAGTGTATGTTTTTC--T--
-T----------TTTT--------TTCTTTTGCATTTAGTTGGGTCCCACATGTAAGCGTCACATTG--TTTTTTTTCTT
TGATTCTTAACTGAAGTTGGAAGGAGGGGCAAAATGGTCCAGAAAAATATCACTCTGACGGTCAAACGCCTTTGACTGTA
CGGAACTGAGACGGAAGGGCAAAAACACAAGAGAAGCAAAGTGGTTTGGACAGGAACAAGTATTTTTGAAAAGTAGGGGT
AAACCTGTCGAGTGTGACCCAACTAGGGGCATAATATCAATTATCCC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr4A_476
GGGAAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------AATTGATGTTATGCCCCTAGTTGGGTCACACTCGACAGGTTTACCCCTACATTTCAAAAATACTCGTT
CCTGCCCAAACCACTTTGATTCTCTTGTGTTTTT-CCTTTCCATCTCAATTCCATCTAGTCAAAGGCGTTTGACTCTTAG
AGAGACATTTTTCTGGACCATTTTGCCCCTCCTTACAACTCCAGTTAAAAATCA---AAGAAAAAA---CAATGTTATGC
TTACATGTGGGACCCAATTAAA-TGCAAGAGAA-AAATAATCATTCCCTCTCTCTCTTCCCTGTGGGACCCACG-CCCCA
TCCCCCTTCCTATCTTCTTCCTCCCCTAGCTCCGGCCTGGCTCCCTCGCTCACTCCACAGCCGGTCACCCACGTCGGTGC
CCTCCCGACCTCGAGACACGGGACAAGAAGCTGTTGCTCGTCTGCCCACCGTCGGTCGGCAGTGCCTCCCCAACCTCCAT
CCCGGCTAGATTCGGTCCCGCTCGAGCCTCCCGCGGCTAGATCTGCCATCTCCGCCGCGCCC-CC-ATGCCCCGCACTGA
TCCTGGCCTCCC-TGCATCGTG----------------------------------------------------------
--------------CCGC-CGCCCGTCCCTGGACCCACCT----TGTCCCGATAGCTCTGGCCATCTACGTTGAATCTCG
GGCAC--------TCCATCCAAACCTC-CC-------------GCCAACAACCTCTAGTGATGTGTCAGATCGAGACCTC
CTACATGCCTTGAGGTGGTGCTTCCTCTACCA---CATC---CATCATGGACAAACATCATGGCCTCGAGGTCCAGCATG
TGCTCATAGGAGGCGCACGTTGGCGAGAGGTCAGCTGCCCCCGCCATGCAGTCC---------------ATCAGCGCGCC
GGTTGACAGAGCCAGGCGGTGTCTGGGGTGGGAGAGGGAGGTGGTAGTGGGGGGCGCCGACGATAGGTCATGCGACACCG
GCGGCATGGGTGCGGCGACACCAGGATAGGGAAAGTGAGGTGTTTGGGGAGGGAGA--GAGAGTGTGTGT----------
-TTTTCTATTTATTTT--------TTATTTTGCATTTAGTTGGGTCCCAGATGTAAGCG-CACATTG----TTTTTTCTT
TGATTCTTAACTGAAGTTGGAAGGAGGGGCAAAATGGTCCAGAAAAATGTCGCTCTGACGGTCAAATGCCTTTGACTGAA
CGAAATTGAGACGAAAGGGAAAAAATACAAGAGAAGCAACGTGGTTTGGACAGGAACGAGTATTTTTGAAAAGTAGGGGT
AAACTTGTTGAGTGTGACCCAACTAGGGGCATAATATCAATTATCCCAA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>chr7B_478
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GATAATTGATATTATGCCCCTAGTTGGGTCACACTGGACAGGTTTACCCCTATTTTTCCAATATACTCGTT
CCTGCCCAAACCACTTTGCTTCTCTTGTGTTTTTGCCCTTCCGTCTCAATTA-GTCTGGTCAAAGGCGTTTGACTGTTAG
AGAGACATTTTTCTGGACAATGTTGCCCCTCCTTACAACTCCTGTTAAAAGTCA---AAGAAAAAAAAACAATGTTACAC
TTACATGTGGGACCCGATTAAA-TGCAAGAGAA-AAAA---CATTCC--CTCTCTCTTCCCTGTGGGACCCACGCCCCCA
TCCCTCTTCCTATCTTCTTCCTTCCCTAGCTCCGGCATGGCTCCCCCGTTCACCCCGCAGCCGGTCACCCACTCCAGTGC
CTCCCCGACCTTGAGCCGCGGGACAAGCAGCTGCTGCCCATTTGCCCGC-------CGCCAGTGCCTCCCCAACCTCCAT
CCCGGTCAGATCCGGTCCAACCCGAGCCTCCCACGACCGGATCTGCCGTCTCTACCGCA-CC-CC-ATGCCCCGCGCCGA
TCCTGGCCTCCCCTGCATCGTGATGCCGCCCTTTGCCCAAGGATCGCCGCCGCC------------------------CC
TTGCCCAAGGATCCCCGC-CGTCCGTCTCTGGACCCACCT----TGTCTCGGTGGCTCTGGCCATCCGCGTCAAATCTCG
AGCAC--------TCCAAGCAAACCTCGCC-------------GTCAACTACCTCCAGCGACGCATCAGATCGAAACCTC
CTGCACGCCTTGCGGTGGCGCTGCCGATGCCA---CATC---CATCACGGACGAACATCGTTCCCTCGAGGTCCAGCGTG
TGCTCA----------------GCGAGGGGTTGGCTGCCCCCGCCATGCAGTCC---------------CTCTGCGCGCC
GGTCGGCAGAGCTGGGCGGTGTCTGGGGTGGGAGAGGGAGGTGGTAGTGGGTAGCGTCGACGGCAGGTCATGCGTCATCG
GCAACACTGATGCGGTGACACCAGGATGAGGAAAGTGAGGTGTTTTGGGAGGGAGA--GAGAGAGTGTATG---------
-TTTTCTATT--TTTT--------TTCTTTTGCTTTTAGTTGGGCCCCACATGTAAGCGTTACATTG----TTTTTTCTT
TGATTCTTAACTGAACTTGGAAGGAGGGGCAAAATGGTCCAGAAAAATGTCACTCTGACGGTCAAACGCCTTTGACTGGA
CGGAATTAAGACGGAA-GGACAAAACACAAGAGAAGCAAAGTGGTTTGGACAAGAACGAGTATTTTCAAAAGGTTGGGGA
AAACCTGTCGAGTGTGACCCAACTAGGGGCATAATATCAATTATCCCAAAA-----------------------------
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>chr1D_777
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TCCCCCTTCCTGTCTTCTTCCTCCCCTAGCCCCGGCATGGCTCCCCCGCTCACCCCACAGCCGGTCACCCACGCCGGTGC
CTCCCCGACCTCGAGCTGCAGGACAAGCAGCTGCTGCCCATCTGCCCGTCGTCAGTCGCCAGTGCCTCCCCAACCTCCAT
CCCGGCCAGATCCGGTCCAGCCCGAGCCTCCCGCGGCCAAATCTGCCGTCTCCGCCGCGCCC-CC-ATGCCCCGTGCCGA
TCCTGGCCTCCCCCGCATCG------------------------CGCCGCTGCC------------------------CC
TTGCCCAAGGATCCCCGCGCGCCCGTCCCTGGACCCACCT----TGTCCCGGTGGTTCTGGCCATCTGCGTCGAATCTCG
GGCAG--------TCCAACCAAACCTCGCC-------------GCCAACTACCTCCAGCGACGCGTCGGATTGAGACCTC
CTGCACGCCTTGCAGTGGTGCTGCCTCTACCA---CATC---CATCACGGACGAACACCGCGGCCTCGAGGTCCAGCGTG
TGCTCATCGGAGGCGCCGGCTAGCGAGAGGTCGGCTGCCC-CGCCATGCAGTCC---------------CTCAGCGCGCC
GGTTGGCAGAACTGGGCGCTGTCTGGGGTGGGAGAGGGAGGTGG-AGTGGGGGGCACCGACGGCAGGTCATGTGATGCTG
GCGGCACGGGTGCGGCGACATCAATATGGAGAAAGTGAGGTGTTTCGGGAGGGAGA--GAGAGAGTGTATG---------
-T----------TTTT--------TTCTTTTGCATTTAGTTGGGTCCCACATGTAAGCGTCACATTG--T-TTTTTTCTT
TGATTCTTAACTGAAGTTGGAAGGAGGGGCAAAATGGTCTAGAAAAATGTCGCTCTGACGGTCAAACGCCTTTGACTGGA
CGGAA-----------GGGCAAAAACACAAGAGAGGCAAAGTGGTTTGGACAGGAACGAGTATA-----------GGGGT
AAACCTATCGAGTGTGACCCAACTAGGGGCATAATATCAATTATCCC---------------------------------
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>chr5D_1213
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------------------------CTCTACCACATCATC---CATCAGGGACGAACACCGTGGCCTCGAGGTCCAGCGTG
TGCTCATCGGAGGCGCCCGCTGGCGAGAGGTCGGCTGCCCTCGCCATTCAGTCC---------------CTCAGCGTGGC
GGTCGGCAGAGCTGGGCGGTGTCTGGGGTGGGAGAGGGAGGTGGTAGTGGGAGTCGCCGACGGTAGGTCATGCGACGCCG
GCGGCACGGGTGCGGCGACAGCAGGATGGGGAAAGTGAGGTGTTTCGGGAGGGAGA--GAGAGAGTGTATG---------
-T----------TTTTCTATTTTTTTCTTTTGCATTTAGTTGGGTCCCACATGTAAGCGTCACATTGG-T-TTTTTTCTT
TGATTCTTAACTAAACTTGGAAGGA-GGGCAAAATGGTCCAGAAAAATGTCGCTCTGACGGTCAAACGACTTTGACCAGA
CGGAATTGAGACAGAAGGGCAAAAACACAAGAGAAGCAAAGTGGTTTGGGCAGGAACGAGTATATTCGAAAAGTAGGGGT
AAACCTGTCGAGTGTGACCCAACTAGGGGCATAGTATCAATTATCCCAAAA-----------------------------
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------------------------
>SNPs
S---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-----------------------------S---------S--------S------S-----
--S---------------S---------S----S---S--SS---S------SS-S--------S--SS----S------
------S------------------------S--S------S-S----SS---S------------------S-------
S----S-S-------S------------S-S---S-S---S------------------S--S----S-S-------S-S
------------------------------------------------------------------------------S-
----------S---------------------------------------------------------------------
-S---S------------------------------------------------S-------------------------
--S----------S------------------------------------------------------------------
---------------------------S--------S-------------------------------------------
------------------S----------------S--------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
----------------------------------------SSSS--------------S--------------------S
-----SSSSSSSS-------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------S---------------------S----SSSSSS-SSSS--SSSSSSSSSSSSSSS-----S-----
S----------------S----S--------------------S--------------S------------------S--
-------------S-------S------------------------------S---------------------------
S----------------------------------------------S--S------S----------------------
--------------------------S-------------------S---------------------------------
--------------------------------------------------------------------------------
-------------------------S-S-----------S-----------S---------S-S------S---S-----
S--SS---------S----SS-----------------------------------SS--S---------S--S------
----------------SS-S--S-S-------S--------S------S---SS-------SS---S------------S
S-----S--SS-----SSSS------------S-------S----S--SSS--S------S--S----SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_130
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------------------------------AGCACCAGTTGGCTCTAACC------------------------------
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>reverse_2144
--------------------------------------------------------------------------------
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---------------------------------------------------------------TCTTACTTGTGCGTCGC
CAT-----------------------------------------------------------------------------
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------------------------
